Aquaculture and Fisheries Commons^™

Fisheries Science Update – October 2021: West Coast Demersal Scalefish Resource, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

Key points: 2021 stock assessment outcomes • The West Coast Demersal Scalefish Resource (WCDSR) is halfway into a 20-year recovery plan following a period of overfishing in the 1990s and 2000s. • This latest assessment provides an important “health check” on the recovery status. • The recovery plan is based on maintaining recreational (including charter) and commercial sector’s total fishing mortality below catch limits and protecting key spawning aggregations to recover the WCDSR by 2030. • The Department of Primary Industries and Regional Development (DPIRD) tracks recovery progress by undertaking weight of evidence stock assessments of WCDSR indicator species dhufish …

Integrated Analyses Of Snp-Genotype And Environmental Data In A Continuously Distributed Snapper Species (Lutjanus Johnii, Bloch, 1792) Reveals A Mosaic Of Populations And A Challenge For Sustainable Management, Laura Taillebois, Danielle Davenport, Diane P. Barton, David Alexander Cook, Thor Saunders, Mark Hearnden, Richard J. Saunders, Stephen J. Newman, Michael J. Travers

Fisheries Research Articles

Understanding population structure is important for predicting the outcomes of anthropogenic development, harvest, and environmental change on the abundance of fisheries species. Logically, the use of several data sources is best for delineating population structure, but combining across data types adds extra challenges as results can be incongruent. Here, genetic and environmental markers were used to test hypotheses about population structure in a collection of 523 tropical inshore finfish (Lutjanus johnii) across northern Australia from 20 locations. Redundancy analyses (RDA) were used to statistically test for correlations among data sources providing a basis for reconciliation and insights into ecological and …

The Gap Between Policy And The People: A Case Study Of The Buikwe Fishing Communities, Capri Gutiérrez

Independent Study Project (ISP) Collection

To examine the implementation of Local Government development planning in periphery and hard to reach communities in Uganda, the fishing villages of the Buikwe District were used as a case study. The objective of the study was to explore how Local Government development planning is implemented in the fishing villages to identify gaps. Implementation was broken down into three areas: consultations, needs and services, and service delivery.

The study mimicked the bottom-up approach to decentralized development planning in Uganda, beginning with seven focus group discussions in five fishing villages of Buikwe. Eleven key informant interviews were then conducted with Local …

Novel Pilot Development Of A Closed-Loop Sustainable System Between Biogas Renewable Energy, Distilling, And Aquaculture By Vermiculture Of Stillage Wastes, Samuel C. Kessler

The Cardinal Edge

This study provides a mixed-methods approach in analyzing a potential closed-loop system between renewable biogas production from anaerobic digestion, vermiculture production, aquaculture production, and organic wastes with a particular focus on stillage wastes. Such system may hold significant promise for significantly reducing organic carbon and methane emissions from its components, and should be assessed for such. The 2021 IPCC report essentially identified methane reduction as the single fastest way to slow global warming (IPCC, 2021), making the study and implementation of methane-reducing systems and supportive policy for them critical. Knowledge gaps to implementing this system were qualitatively identified as disconnect …

A Modular Open-Technology Device To Measure And Adjust Concentration Of Sperm Samples For Cryopreservation, Nikolas C. Zuchowicz

LSU Master's Theses

Repositories for aquatic germplasm can safeguard the genetic diversity of species of interest to aquaculture, research, and conservation. The development of such repositories is impeded by a lack of standardization both within laboratories and across the research community. Protocols for cryopreservation are often developed ad hoc and without close attention to variables, such as sperm concentration, that strongly affect the success and consistency of cryopreservation. The wide dissemination and use of specialized tools and devices can improve processing reliability, provide data logging, produce custom hardware to address unique problems, and save costs, time, and labor. The goal of the present …

Otoliths Of South-Western Australian Fish: A Photographic Catalogue, Chris Dowling, Kim Smith, Elaine Lek, Joshua Brown

Fisheries Research Reports

Due to the species-specific nature of otoliths and given they are often the only part of the fish preserved when fish die, otolith catalogues can be used in numerous applications, such as diet studies in fish eating animals, including pinnipeds, fish and sea birds; archaeological purposes such as reconstructing indigenous people’s diets from otoliths found in middens or evolutionary history of fish species by comparing fossilized otoliths. Given the unique mixture of subtropical and temperate fish, including many endemic species that occur off the southwest corner of WA having a catalogue for this area is extremely important for people working …

Green Economics: Assessing The Feasibility Of A New England Green Crab (Carcinus Maenas) Fishery Through Fishermen Perspectives, William L. Walter

All Theses And Dissertations

The European green crab (Carcinus maenas) is a well-adapted invasive species that has flourished throughout coastal New England. Its arrival has caused numerous negative environmental and socioeconomic impacts, including the decline of the Maine soft shell clam (Mya arenaria) fishery. Increases in north Atlantic sea surface temperatures have simultaneously propelled the proliferation of C. maenas and caused northward shifts in the geographic ranges of commercially relevant species, including the American lobster (Homarus americanus). C. maenas represents an underutilized species that H. americanus and M. arenaria fishers can target to supplement any lost income if …

Continental-Scale Network Reveals Cross-Jurisdictional Movements Of Sympatric Sharks With Implications For Assessment And Management, Charlie Huveneers, Yuri Niella, Michael Drew, Rory Mcauley, Paul A. Butcher, Victor Peddemors, Daniela Waltrick, Chris Dowling, Silas Mountford, Ian S. Keay, Matias Braccini

Fisheries Research Articles

Understanding the movement ecology of marine species and connectivity of populations is required for effective fisheries management. This is especially the case for species with wide-ranging distributions for which movement can span across several jurisdictions with different management regulations. We used the Australian national network of acoustic receivers facilitated by the Integrated Marine Observing System (IMOS) to describe the extent and frequency of movements for two large epipelagic shark species, the bronze whaler (Carcharhinus brachyurus) and dusky shark (Carcharhinus obscurus). A total of 210 sharks (117 bronze whalers and 93 dusky sharks) were tracked for a …

Primary Industries Development Research Highlights 2021, Department Of Primary Industries And Regional Development, Tim Scanlon

Books & book chapters

The Primary Industries Development Research Highlights 2021 showcases the breadth and depth of the Department of Primary Industries and Regional Development’s research and development activities over the past several years.

Stories featured in Research Highlights 2021 stem from about 60 (of 140) current and recently-completed projects undertaken by the Department of Primary Industries and Regional Development’s (DPIRD) 1100 scientists, technical experts and economists throughout the State.

Explore our Research Highlights 2021.

The publication demonstrates the innovative and applicable research that DPIRD and its collaborators and investment partners deliver to Western Australia.

Download the Research Highlights 2021 here. Alternatively, …

How To Avoid The Use Of Chemicals To Control Parasites In Salmon Farming?, Cintya Gajardo Vejar

International Programs

The development of salmon farming in the world has been accompanied by a number of conditions like parasitism by Sea Lice (Caligus rogercresseyi), this problem occurs in the fattening stage of Atlantic Salmon (Salmo salar) in the sea, increasing mortality and generating economic losses. The salmon industry efforts have focused on resolving the Sea Lice parasitism (C. rogercresseyi) through the use of antibiotics to control the infestation and the use of vaccines to prevent it, but it presents biological implications for salmon, the marine environment and human health.

Assessing The Short-Term Effects Of Translocation On Freshwater Mussels: Is Habitat Or Water Quality More Important?, Joshua D. Arnold

Masters Theses

Freshwater mussels (Order: Unionida) are very important to the function of aquatic ecosystems and are typically indicators of good water quality. They provide a valuable link between the water column and the benthic substrate in which they live and are a valuable food resource for many species of animals. However, most species native to North America are currently threatened with extinction, to the point that more than 70% of native freshwater mussels are listed as either threatened or endangered at the state or federal level. The cause of this decline can be attributed to historical over exploitation, habitat alteration, and …

Three Newly Recorded Genera And Species Of Gobiid Fishes (Teleostei: Gobiidae) From The Dongsha Atoll (Pratas Islands), South China Sea, Shao-Liang Hsu, Ta-Kang Liu, Kwang-Tsao Shao, Kuan-Te Chen, I-Shiung Chen

Journal of Marine Science and Technology–Taiwan

Three newly recorded gobiid genera of coral-reef gobies have been collected and examined by scuba diving in the Dongsha Atoll, also known as the Pratas Islands, South China Sea. They are Feia Smith, 1959; Sueviota Winterbottom and Hoese, 1988; and Trimmatom Winterbottom and Emery, 1981. These three genera were formerly unrecorded in the Dongsha Atoll and all Taiwanese waters before this paper. One representing species was found for each gobiid genus. The diagnosis for these three newly recorded species and genera will be provided in this paper.

Imputation Of Missing Count Data Of Recreational Boat Retrievals From Remote Camera Surveys In The Perth Metropolitan Region, Western Australia, E. Afrifa-Yamoah, S.M Taylor, Cameron J. Desfosses, U. A. Mueller

Fisheries Research Reports

In Western Australia (WA), remote cameras have been used to monitor boating activity at boat ramps since 2006 to assist in ongoing recreational fishing surveys. These monitoring schemes are useful tools to validate boating activity (defined here as the number of retrievals) and to corroborate estimates of recreational fishing effort obtained from other surveys. This is because remote cameras (also referred to as digital cameras) can provide complete coverage (i.e. 24 hours, 365 days) of boating activities.

Administrative Guideline No.3: The Management Of Errors In Reported Entitlement Taken In The West Coast Rock Lobster Managed Fishery, Department Of Primary Industries And Regional Development

Fisheries Administrative Guidelines

These Administrative Guidelines address how errors in the submission of reported net weights in the West Coast Rock Lobster Managed Fishery (the Fishery) are to be managed. There is an onus on the Master and the Registered Receiver to provide accurate information when submitting the weight (in kilograms) of rock lobster taken for each consignment, under the West Coast Rock Lobster Managed Fishery Management Plan 2012 (the Plan).

Gain-Of-Function Polymorphisms In Human Inflammasomes: Implications For Cystic Fibrosis, Duane Jeansonne, Samithamby Jeyaseelan

Faculty Publications

No abstract provided.

The Waste Management Of Large-Scale Recirculating Aquaculture Systems And Potential Value-Added Products From The Waste Stream, Franco R. Pilone

All Theses And Dissertations

Recirculating Aquaculture Systems (RAS) is an emerging technology that is capturing the attention of many in aquaculture due to its ability to produce high-quality seafood using sustainable models. This study explored the waste management of RAS, specifically further treatment technologies, and the potential value-added products from the RAS waste stream that can be reused. Advanced, tertiary, or down-stream treatment technologies available for RAS were investigated through a literature review. Utilizing the constant comparative method and semistructured interviews with stakeholders in RAS, opinions and attitudes were collected about advanced treatment of RAS waste and reuse opportunities presented from value-added products generated …

Effects Of Human Footprint And Biophysical Factors On The Body-Size Structure Of Fished Marine Species, Nestor E. Bosch, Jacquomo Monk, Jordan Goetze, Shaun K. Wilson, Russell C. Babcock, Neville Barrett, Jock Clough, Leanne M. Currey-Randall, David Fairclough, Rebecca Fisher, Brooke A. Gibbons, David Harasti, Euan S. Harvey, Michelle R. Heupel, Jamie Hicks, Thomas H. Holmes, Charlie Huveneers, Daniel Ierodiaconou, Alan Jordan, Nathan A. Knott, Hamish A. Malcolm, Dianne L. Mclean, Mark G. Meekan, Stephen J. Newman, Ben Radford, Matthew J. Rees, Benjamin J. Saunders, Conrad W. Speed, Michael J. Travers, Corey Wakefield, Thomas Wernberg, Tim Langlois

Fisheries Research Articles

Marine fisheries in coastal ecosystems in many areas of the world have historically removed large-bodied individuals, potentially impairing ecosystem functioning and the long-term sustainability of fish populations. Reporting on size-based indicators that link to food-web structure can contribute to ecosystem-based management, but the application of these indicators over large (cross-ecosystem) geographical scales has been limited to either fisheries-dependent catch data or diver-based methods restricted to shallow waters (<20 m) that can misrepresent the abundance of large-bodied fished species. We obtained data on the body-size structure of 82 recreationally or commercially targeted marine demersal teleosts from 2904 deployments of baited remote underwater stereo-video (stereo-BRUV). Sampling was at up to 50 m depth and covered approximately 10,000 km of the continental shelf of Australia. Seascape relief, water depth, and human gravity (i.e., a proxy of human impacts) were the strongest predictors of the probability of occurrence of large fishes and the abundance of fishes above the minimum legal size of capture. No-take marine reserves had a positive effect on the abundance of fishes above legal size, although the effect varied across species groups. In contrast, sublegal fishes were best predicted by gradients in sea surface temperature (mean and variance). In areas of low human impact, large fishes were about three times more likely to be encountered and fishes of legal size were approximately five times more abundant. For conspicuous species groups with contrasting habitat, environmental, and biogeographic affinities, abundance of legal-size fishes typically declined as human impact increased. Our large-scale quantitative analyses highlight the combined importance of seascape complexity, regions with low human footprint, and no-take marine reserves in protecting large-bodied fishes across a broad range of species and ecosystem configurations.

Testing A Global Standard For Quantifying Species Recovery And Assessing Conservation Impact, Molly K. Grace, H Resit Akcakaya, Elizabeth L. Bennett, Thomas M. Brooks, Anna Heath, Simon Hedges, Craig Hilton-Taylor, Michael Hoffmann, Axel Hochkirch, Richard Jenkins, David A. Keith, Barney Long, David P. Mallon, Erik Meijaard, E J. Milner-Gulland, Jon Paul Rodriguez, P J. Stephenson, Simon N. Stuart, Richard P. Young, David Fairclough

Fisheries Research Articles

Recognizing the imperative to evaluate species recovery and conservation impact, in 2012 the International Union for Conservation of Nature (IUCN) called for development of a “Green List of Species” (now the IUCN Green Status of Species). A draft Green Status framework for assessing species’ progress toward recovery, published in 2018, proposed 2 separate but interlinked components: a standardized method (i.e., measurement against benchmarks of species’ viability, functionality, and preimpact distribution) to determine current species recovery status (herein species recovery score) and application of that method to estimate past and potential future impacts of conservation based on 4 metrics ( …

A Large-Scale Experiment Finds No Evidence That A Seismic Survey Impacts A Demersal Fish Fauna, Mark G. Meekan, Conrad W. Speed, Robert D. Mccauley, Rebecca Fisher, Matthew J. Birt, Leanne M. Currey-Randall, Jayson M. Semmens, Stephen J. Newman, Katherine Cure, Marcus Stowar, Brigit Vaughan, Miles J G Parsons

Fisheries Research Articles

Seismic surveys are used to locate oil and gas reserves below the seabed and can be a major source of noise in marine environments. Their effects on commercial fisheries are a subject of debate, with experimental studies often producing results that are difficult to interpret. We overcame these issues in a large-scale experiment that quantified the impacts of exposure to a commercial seismic source on an assemblage of tropical demersal fishes targeted by commercial fisheries on the North West Shelf of Western Australia. We show that there were no short-term (days) or long-term (months) effects of exposure on the composition, …

Fisheries Food Webs: Quantifying Habitat-Use, Trophic Structure, And Energetic Pathways In Coastal Tanzania, Mario Fernando Hernandez

LSU Doctoral Dissertations

Commercial and recreational fisheries are a valuable resource to millions of people around the world. Developing countries are particularly dependent on the revenue provided by locally harvested fish with total exports from these nations valued at $80 billion USD. For Tanzania, fisheries provide not only a source of revenue but an important source of protein with an estimated 25 to 30kg of fish consumed per person every year. There is no doubt that high fisheries production is critical to the well-being of millions of livelihoods along the Tanzanian coast. An important but poorly understood driver of fisheries production is the …