Physical Sciences and Mathematics Commons^™

Mapping Per- And Polyfluoroalkyl Substances (Pfas) In South Carolina Surface Waters: Are There Hotspots?, Thomas C. Geiger

Senior Theses

Per- and polyfluoroalkyl substances (PFAS) are synthetic chemicals used in consumer products for their unique chemical properties. PFAS compounds are resistant to water, oil, heat, and grease, making them useful for a wide variety of everyday items such as non-stick cooking pans, food packaging, electronics, carpets, upholstery, paints, adhesives, and personal care products.¹ The resilient nature of PFAS has made these compounds immensely popular with consumers but has since been considered a potential environmental and public health hazard for their ability to bioaccumulate and for their stability in the environment. More than 6000 PFAS have been discovered in the …

Wernicke's Encephalopathy: Mapping The Risk Factors Throughout The State Of South Carolina, Shannon M. Rychener

Senior Theses

Wernicke’s Encephalopathy is a consistently underrecognized neurodegenerative brain disorder resulting from prolonged thiamine deficiency. Clinical presentation of the disease results from brain lesions attributable to thiamine deficiency. Because these lesions occur in various locations in the cerebral cortex, symptoms can vary significantly. Varied presentation of symptoms, in addition to the lack of a widely accepted biomarker for the disorder cause challenges to clinicians when identifying and diagnosing the disorder. Due to these challenges, healthcare providers must heavily rely on patient history and risk factor prevalence when multiple symptoms of the disorder are present. By mapping the prevalence of the four …

Moral Injury To Inform Analysis Of Post-Traumatic Stress Disorder, Amanda Julia Manea

Senior Theses

Post-traumatic stress disorder (PTSD) is a mental health condition that almost one out of ten veterans struggle with. Although the National Center for PTSD has made extensive progress in characterizing and developing new treatments for PTSD, most veterans still experience symptoms of PTSD following treatment. Novel avenues of investigation, such as developing algorithms to review electronic health record (EHR) data and better understanding moral injury, are being pursued to address the gap that still exists when it comes to treating veterans. Moral injury is the individual evaluation of exposure to a potentially morally injurious event (PMIE) and can lead to …

Pc-01 Synthesis Of Zinc Glycoconjugated Phthalocyanines As A Potential Phototherapeutic, Jessica A. Silva-Conejo, Katrina Mccarter, Tessa Greene, Joshua V. Ruppel

SC Upstate Research Symposium

Photodynamic Therapy (PDT) uses photosensitizers that are activated by light to produce singlet oxygen that can cause cell damage and potential cell death. Phthalocyanines are promising photosensitizers due to their absorption at clinically relevant wavelengths, meaning that they absorb at a wavelength that can penetrate deeper into tissues.

One challenge with using Phthalocyanines is that they have very low solubility in biological media. One potential approach to increase solubility is through glycoconjugation. Glycoconjugation can also be used as a strategy to increase selectivity toward targeted tissues. Glycoconjugated phthalocyanines can be synthesized using a copper catalyzed azide-alkyne cycloaddition reaction, otherwise known …

Traffic Lights For Catalysis: Stimuli-Responsive Molecular And Extended Catalytic Systems, Grace C. Thaggard, Johanna Haimeri, Roland A. Fischer Prof. Dr., Kyoung Chul Park, Natalia B. Shustova Prof. Dr.

Faculty Publications

The advances made in the field of stimuli-responsive catalysis during the last five years with a focus on the novel recently-emerged directions and applications have been surveyed. Metal-free catalysts and organometallic complexes, as well as biomimetic systems and extended structures, which display switchable catalytic activity for a variety of organic transformations, are discussed. Light-activated systems comprised of photochromic molecules capable of modulating reaction rate, yield, or enantioselectivity based on geometric and electronic changes associated with photoisomerization are the focus of the detailed discussion. Alternative stimuli, including pH and temperature, which could be applied either alone or in combination with light, …

Off-Shell Effects In Bound Nucleons And Parton Distributions From 1H, 2H, 3H, And 3He Data, S. I. Alekhin, S. A. Kulagin, Roberto Petti

Faculty Publications

We report the results of a new global QCD analysis including deep-inelastic scattering data off ¹H, ²H, ³H, and ³He targets. Nuclear corrections are treated in terms of a nuclear convolution approach with off-shell bound nucleons. The off-shell (OS) corrections responsible for the modification of the structure functions (SFs) of bound nucleons are constrained in a global fit along with the proton parton distribution functions (PDFs) and the higher-twist (HT) terms. We investigate the proton-neutron difference for the OS correction and discuss our predictions for the SF ratio F ⁿ ₂ / F ^p ₂ and …

Measurement Of The Double-Differential Muon-Neutrino Charged-Current Inclusive Cross Section In The Nova Near Detector, M. A. Acero, P. Adamson, L. Aliaga, N. Anfimov, A. Antoshkin, E. Arrieta-Diaz, L. Asquith, A. Aurisano, A. Back, M. Baird, N. Balashov, P. Baldi, B. A. Bambah, S. Bashar, K. Bays, B. Behera, R. Bernstein, V. Bhatnagar, D. Bhattarai, B. Bhuyan, Roberto Petti, Et. Al.

Faculty Publications

We report cross-section measurements of the final-state muon kinematics for ν_μ charged-current interactions in the NOvA near detector using an accumulated 8.09×10²⁰ protons on target in the NuMI beam. We present the results as a double-differential cross section in the observed outgoing muon energy and angle, as well as single-differential cross sections in the derived neutrino energy, E_ν, and square of the four-momentum transfer, Q². We compare the results to inclusive cross-section predictions from various neutrino event generators via χ² calculations using a covariance matrix that accounts for bin-to-bin correlations of systematic uncertainties. …

Search For Heavy Neutral Leptons Using Tau Lepton Decays At Babar, J. P. Lees, V. Poireau, V. Tisserand, E. Grauges, A. Palano, G. Eigen, D. N. Brown, Yu. G. Kolomensky, M. Fritsch, H. Koch, R. Cheaib, C. Hearty, T. S. Mattison, J. A. Mckenna, R. Y. So, V. E. Blinov, A. R. Buzykaev, V. P. Druzhinin, E. A. Kravchenko, Milind Purohit, Et. Al.

Faculty Publications

This article presents a model-independent search for an additional, mostly sterile, heavy neutral lepton (HNL), that is capable of mixing with the Standard Model τ neutrino with a mixing strength of |U_τ4| 2, corresponding to the absolute square of the extended Pontecorvo-Maki-Nakagawa-Sakata matrix element. Data from the BABAR experiment, with a total integrated luminosity of 424 fb⁻¹, are analyzed using a kinematic approach that makes no assumptions on the model behind the origins of the HNL, its lifetime or decay modes. No significant signal is found. Upper limits on |U_τ4|² at the 95% …

Search For Rare Decays B+→D (*)+SΗ, D (*)+ SK̅, D+ Η, And D+ K0, M. Kumar, V. Bhardwaj, K. Lalwani, I. Adachi

Faculty Publications

We present a study of rare decay modes B+→D⁺_Sh⁰, B+→D^*+_S h⁰, and B+→D+h⁰, where h⁰ denotes the neutral meson η or K⁰, using a data sample of (772±10)×10⁶   BB̅ events produced at the Υ(4S) resonance. The data were collected by the Belle detector operating at the asymmetric-energy KEKB collider. We find no evidence for these decays, so we set upper limits at the 90% confidence level on the branching fractions of B+→D⁺ _S h⁰, D^*+ _S h⁰, …

Three- And Four-Point Functions In Cpt -Even Lorentz-Violating Scalar Qed, Brett Altschul, L. C.T. Brito, J. C.C. Felipe, S. Karki, A. C. Lehum, A. Yu Petrov

Faculty Publications

The renormalization of quantum field theories usually assumes Lorentz and gauge symmetries, besides the general restrictions imposed by unitarity and causality. However, the set of renormalizable theories can be enlarged by relaxing some of these assumptions. In this work, we consider the particular case of a CPT-preserving but Lorentz-breaking extension of scalar QED. For this theory, we calculate the one-loop radiative corrections to the three- and four-point scalar-vector vertex functions, at the lowest order in the Lorentz-violation parameters, and we explicitly verify that the resulting low-energy effective action is compatible with the usual gauge invariance requirements. With these results, we …

Measurement Of The VE- Nucleus Charged-Current Double-Differential Cross Section At 〈EV⟩ = 2.4 Gev Using Nova, M. A. Acero, P. Adamson, L. Aliaga, N. Anfimov, A. Antoshkin, E. Arrieta-Diaz, L. Asquith, A. Aurisano, A. Back, M. Biard, N. Balashov, P. Baldi, B. A. Bambah, S. Bashar, K. Bays, R. Bernstein, V. Bhatnagar, D. Bhattarai, B. Bhuyan, J. Bian, Roberto Petti, Et. Al.

Faculty Publications

The inclusive electron neutrino charged-current cross section is measured in the NOvA near detector using 8.02×10²⁰ protons-on-target in the NuMI beam. The sample of GeV electron neutrino interactions is the largest analyzed to date and is limited by ≃17% systematic rather than the ≃7.4% statistical uncertainties. The double-differential cross section in final-state electron energy and angle is presented for the first time, together with the single-differential dependence on Q² (squared four-momentum transfer) and energy, in the range 1  GeV≤E_νGENIE, GiBUU, NEUT, and NuWro neutrino event generators. The data do not strongly favor a model over the …

Soil Organic Matter Diagenetic State Informs Boreal Forest Ecosystem Feedbacks To Climate Change, Allison N. Myers-Pigg, Karl Kaiser, Ronald Benner, Susan E. Ziegler

Faculty Publications

The fate of soil organic carbon (SOC) in boreal forests is dependent on the integrative ecosystem response to climate change. For example, boreal forest productivity is often nitrogen (N) limited, and climate warming can enhance N cycling and primary productivity. However, the net effect of this feedback on the SOC reservoir and its longevity with climate change remain unclear due to difficulty in detecting small differences between large and variable carbon (C) fluxes needed to determine net changes in soil reservoirs. The diagenetic state of SOC – resulting from the physicochemical and biological transformations that alter the original biomolecular composition …

Reducing Tracheal Complications In Endotracheal Intubation Patients Using Automated Cuff Pressure Modulation, Shrihan G. Babu

Journal of the South Carolina Academy of Science

Endotracheal tube intubation is the third most frequent procedure, performed approximately 13-20 million times yearly in the United States (Mosier et al., 2020). Despite the regularity of the procedure, intubation-related complications such as tracheal injuries, laryngeal injuries, and ventilator-associated pneumonia are ubiquitous due to improper cuff pressure management methods (Ganti et al., 2018). Current techniques, such as the pilot balloon and minimal leak technique, have proven ineffective and inconsistent in managing pressure. As a result, over 71.6% of intubation patients have abnormally high cuff pressures (Ramírez, 2014). Therefore, the purpose of this research was to design an endotracheal tube with …

The Effects Of Salinity And Acetaminophen On The Aquatic Snail Physa Acuta, Michelle Sackey-Ansah, Megan Mackey, Daniel Elias, Jason Doll, Alyssa Brookhart

Journal of the South Carolina Academy of Science

Pharmaceuticals are increasingly detected in water bodies, and their presence can negatively impact aquatic organisms. This effect can be amplified when combined with increasing salinity in freshwater ecosystems. Acetaminophen is a widely used analgesic that is commonly found in river, streams, and waters where it is discharged directly. Therefore, organisms present in these locations (e.g., insects, snails, amphibians, and fish) are likely to be affected by acetaminophen. In this study, we determined the effects of elevated salinity (0.68 g/L), acetaminophen (500 µg/L) and combined elevated salinity (0.68 g/L) and acetaminophen (500 µg/L), on the growth, reproduction, and movement of the …

The Boozi Device’S Effect On Aroma Compounds In Distilled Spirits, Drew Budner, Lindsey Bell, Katherine Thompson-Witrick

Journal of the South Carolina Academy of Science

The BooZi is a commercially available flavor-modifying device that claims to remove the negative flavor agents (congeners) from a number of different types of distilled spirits and wines. SPME was utilized for the extraction of the volatile and semi-volatile compounds within each sample. The analysis of the compounds found in the samples following exposure to the BooZi device were analyzed using a GC-MS. The most significant changes regarding the aroma profile of the distilled spirits were noticeable following 96 hours of exposure. The BooZi device was shown to be effective in reducing the concentration of a number of compounds, including …

Microplastics And Tire Wear Particles In South Carolina Coastal Waters: Sources, Pathways, And Toxicity, John E. Weinstein

Journal of the South Carolina Academy of Science

No abstract provided.

Synthesis And Characterization Of Polymer Grafted Nanoparticles, Eric Gerald Ruzicka

Theses and Dissertations

This dissertation focuses on the design, synthesis, and characterization of well controlled interfaces on nanoparticle surfaces. Reversible addition-fragmentation chain transfer (RAFT) polymerization was used to synthesize block copolymers and polymer grafted silica nanoparticles (PGNs) with precise control over molecular weight, graft density, and architectures.

In the first chapter, polymer molecular weights were determined through diffusion ordered spectroscopy NMR (DOSY NMR) as an alternative to size exclusion chromatography (SEC). Polymer standards of known molecular weight were analyzed through DOSY to obtain their respective diffusion coefficients. A calibration curve was generated correlating diffusion coefficients with polymer molecular weights. The reliability of the …

Dynamic Function Learning Through Control Of Ensemble Systems, Wei Zhang, Vignesh Narayanan, Jr-Shin Li

Publications

Learning tasks involving function approximation are preva- lent in numerous domains of science and engineering. The underlying idea is to design a learning algorithm that gener- ates a sequence of functions converging to the desired target function with arbitrary accuracy by using the available data samples. In this paper, we present a novel interpretation of iterative function learning through the lens of ensemble dy- namical systems, with an emphasis on establishing the equiv- alence between convergence of function learning algorithms and asymptotic behavior of ensemble systems. In particular, given a set of observation data in a function learning task, we …

Cooperative Deep Q -Learning Framework For Environments Providing Image Feedback, Krishnan Raghavan, Vignesh Narayanan, Sarangapani Jagannathan

Publications

In this article, we address two key challenges in deep reinforcement learning (DRL) setting, sample inefficiency, and slow learning, with a dual-neural network (NN)-driven learning approach. In the proposed approach, we use two deep NNs with independent initialization to robustly approximate the action-value function in the presence of image inputs. In particular, we develop a temporal difference (TD) error-driven learning (EDL) approach, where we introduce a set of linear transformations of the TD error to directly update the parameters of each layer in the deep NN. We demonstrate theoretically that the cost minimized by the EDL regime is an approximation …

Moment-Based Reinforcement Learning For Ensemble Control, Yao-Chi Yu, Vignesh Narayanan, Jr-Shin Li

Publications

Problems involving controlling the collective behavior of a population of structurally similar dynamical systems, the so-called ensemble control, arise in diverse emerging applications and pose a grand challenge in systems science and control engineering. Owing to the severely under-actuated nature and the difficulty of placing large-scale sensor networks, ensemble systems are limited to being actuated and monitored at the population level. Moreover, mathematical models describing the dynamics of ensemble systems are often elusive. Therefore, it is essential to design broadcast controls that excite the entire population in such a way that the heterogeneity in system dynamics are robustly compensated. In …

Rhabdomyolysis And Hypothyroidism In A Collegiate Hammer Thrower: A Disablement Model Case Study, S. Andrew Cage, Robert Michael Galbraith, Rebecca Peebles, Payton Williams, Brandon Warner

Clinical Practice in Athletic Training

The purpose of this disablement model case report was to detail the case of a patient suffering from rhabdomyolysis and hypothyroidism. Despite swelling, cramping, and loss of range of motion at the wrists, hands, and fingers, the patient did not seek physician evaluation until their athletic trainer encouraged them. While hypothyroidism is a relatively common condition, there has been little literature published that associate hypothyroidism with rhabdomyolysis. In this case, the patient reported to the athletic training staff reporting swelling, cramping, and loss of range of motion at the wrists, hands, and fingers. After evaluation by the team physician and …

Nitrous Oxide Production And Isotopomer Composition By Fungi Isolated From Salt Marsh Sediments, Birch Maxwell Lazo-Murphy, Samantha Larson, Sydney Staines, Heather Bruck, Julianne Mchenry, Annie Bourbonnais, Xuefeng Peng

Faculty Publications

The emissions of nitrous oxide (N₂O), a potent greenhouse gas and ozone-depleting agent, have been steadily increasing from coastal environments, such as salt marsh sediments, as a result of anthropogenic nutrient loading. Biotic processes, including nitrification and denitrification, are the largest sources of N₂O from salt marsh sediments. While it is assumed that the bulk of N₂O from salt marsh sediment is produced by nitrification and bacterial denitrification, recent reports suggest fungal denitrification may contribute significantly. In this study, four fungi capable of growth under sulfidic conditions were isolated from salt marsh sediments in …

Editorial: Sustainability Of Physical Activity Interventions And Public Health, Erica Y. Lau, Maureen C. Ashe, Sharon E. Taverno, Russell R. Pate Ph.D.

Faculty Publications

No abstract provided.

Association Of Chlorhexidine Use And Scaling And Root Planing With Birth Outcomes In Pregnant Individuals With Periodontitis: A Systematic Review And Meta-Analysis, Maxwell Akonde, Rajat Das Gupta, Maxwell Akonde, Mark Reynolds, Stephanie Smith-Warner, Jihong Liu Sc.D., Fouzia Tarannum, James Beck, Donald Mattison

Faculty Publications

Importance Chlorhexidine mouthwash enhances treatment effects of conventional periodontal treatment, but data on chlorhexidine as a source of heterogeneity in meta-analyses assessing the treatment of maternal periodontitis in association with birth outcomes are lacking.

Objective To assess possible heterogeneity by chlorhexidine use in randomized clinical trials (RCTs) evaluating the effect of periodontal treatment (ie, scaling and root planing [SRP]) vs no treatment on birth outcomes.

Data Sources Cochrane Oral Health’s Trials Register, Cochrane Pregnancy and Childbirth’s Trials Register, Cochrane Central Register of Controlled Trials (CENTRAL), MEDLINE Ovid, Embase Ovid, LILACS BIREME Virtual Health Library (Latin American and Caribbean Health Science …

Association Of Chlorhexidine Use And Scaling And Root Planing With Birth Outcomes In Pregnant Individuals With Periodontitis: A Systematic Review And Meta-Analysis, Anwar T. Nerchant, Rajat Das Gupta, Maxwell Akonde, Mark Reynolds, Stephanie Smith-Warner, Jihong Liu, Fouzia Tarannum, James Beck, Donald Mattison

Faculty Publications

Importance Chlorhexidine mouthwash enhances treatment effects of conventional periodontal treatment, but data on chlorhexidine as a source of heterogeneity in meta-analyses assessing the treatment of maternal periodontitis in association with birth outcomes are lacking.

Objective To assess possible heterogeneity by chlorhexidine use in randomized clinical trials (RCTs) evaluating the effect of periodontal treatment (ie, scaling and root planing [SRP]) vs no treatment on birth outcomes.

Data Sources Cochrane Oral Health’s Trials Register, Cochrane Pregnancy and Childbirth’s Trials Register, Cochrane Central Register of Controlled Trials (CENTRAL), MEDLINE Ovid, Embase Ovid, LILACS BIREME Virtual Health Library (Latin American and Caribbean Health Science …

A Bayesian Susceptible-Infectious-Hospitalized-Ventilated-Recovered Model To Predict Demand For Covid-19 Inpatient Care In A Large Healthcare System, Stella Coker Watson Self Ph.D., Ms, Rongjie Huang, Shrujan Amin, Joseph Ewing, Carolina Rudisill, Alexander C. Mclain Ph.D.

Faculty Publications

The COVID-19 pandemic has strained healthcare systems in many parts of the United States. During the early months of the pandemic, there was substantial uncertainty about whether the large number of COVID-19 patients requiring hospitalization would exceed healthcare system capacity. This uncertainty created an urgent need to accurately predict the number of COVID-19 patients that would require inpatient and ventilator care at the local level. As the pandemic progressed, many healthcare systems relied on such predictions to prepare for COVID-19 surges and to make decisions regarding staffing, the discontinuation of elective procedures, and the amount of personal protective equipment (PPE) …

A Bayesian Susceptible-Infectious-Hospitalized-Ventilated-Recovered Model To Predict Demand For Covid-19 Inpatient Care In A Large Healthcare System, Stella Coker Watson Self Ph.D., Ms, Rongjie Huang, Shrujan Amin, Joseph Ewing, Caroline Rudisill, Alexander C. Mclain

Faculty Publications

The COVID-19 pandemic has strained healthcare systems in many parts of the United States. During the early months of the pandemic, there was substantial uncertainty about whether the large number of COVID-19 patients requiring hospitalization would exceed healthcare system capacity. This uncertainty created an urgent need to accurately predict the number of COVID-19 patients that would require inpatient and ventilator care at the local level. As the pandemic progressed, many healthcare systems relied on such predictions to prepare for COVID-19 surges and to make decisions regarding staffing, the discontinuation of elective procedures, and the amount of personal protective equipment (PPE) …

Survival Of Epithelial Ovarian Cancer In Black Women: A Society To Cell Approach In The African American Cancer Epidemiology Study (Aaces), Joellen M. Schildkraut, Courtney Johnson, Lauren F. Dempsey, Bo Qin, Paul Terry, Maxwell Akonde, Edward S. Peters, Hannah Mandle, Michele L. Cote, Lauren Peres, Patricia Moorman, Ann G. Schwartz, Micheal Epstein, Jeffrey Marks, Melissa Bondy, Andrew B. Lawson, Anthony Alberg, Elisa V. Bandera

Faculty Publications

Purpose

The causes for the survival disparity among Black women with epithelial ovarian cancer (EOC) are likely multi-factorial. Here we describe the African American Cancer Epidemiology Study (AACES), the largest cohort of Black women with EOC.

Methods

AACES phase 2 (enrolled 2020 onward) is a multi-site, population-based study focused on overall survival (OS) of EOC. Rapid case ascertainment is used in ongoing patient recruitment in eight U.S. states, both northern and southern. Data collection is composed of a survey, biospecimens, and medical record abstraction. Results characterizing the survival experience of the phase 1 study population (enrolled 2010–2015) are presented.

Results …

Predicted Episode Of Submarine Groundwater Discharge Onto The South Carolina, Usa, Continental Shelf And Its Effect On Dissolved Oxygen, Wilson S. Moore, Jacob Vincent, James L. Pickney, Alicia M. Wilson

Faculty Publications

Submarine groundwater discharge (SGD) may directly influence the dissolved oxygen (DO) content of coastal bottom waters. Here, we report a predicted episode of enhanced SGD that caused low DO concentrations on the South Carolina continental shelf. The prediction model linked episodes of SGD to upwelling-favorable winds. The data revealed these waters were a factor of 2–6 higher in ²²⁶Ra and ²²⁸Ra compared to typical bottom water values and were significantly depleted in DO (<130 μM). The tight ²²⁸Ra:²²⁶Ra correlation of these data was similar to values during a strong hypoxic event off SC in 2012. Water ages from …

Enhanced Structural Control Of Soft-Templated Mesoporous Inorganic Thin Films By Inert Processing Conditions, Maximilliano Jesus Jara Fornerod, Alberto Alvarez-Fernandez, Eric R. Williams, Miximillian W.A. Skoda, Beatriz Prieto-Simon, Nicolas H. Voelcker, Morgan Stefik, Marc-Oliver Coppens, Stefan Guldin

Faculty Publications

Mesoporous thin films are widely used for applications in need of high surface area and efficient mass and charge transport properties. A well-established fabrication process involves the supramolecular assembly of organic molecules (e.g., block copolymers and surfactants) with inorganic materials obtained by sol-gel chemistry. Typically, subsequent calcination in air removes the organic template and reveals the porous inorganic network. A significant challenge for such coatings is the anisotropic shrinkage due to the volume contraction related to solvent evaporation, inorganic condensation, and template removal, affecting the final porosity as well as pore shape, size, arrangement, and accessibility. Here, we show that …