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Full-Text Articles in Botany

Monoclonal Antibodies Against Methyl Glucuronoxylan Epitopes For Understanding Xylan Structure And Modification, Utku Avci Jan 2023

Monoclonal Antibodies Against Methyl Glucuronoxylan Epitopes For Understanding Xylan Structure And Modification, Utku Avci

Turkish Journal of Botany

Lignocellulosic biomass is an abundant and renewable source that could be utilized for production of many bioproducts. It mainly consists of cellulose, hemicellulose, and lignin, all of which come together to form a recalcitrant wall that impedes production of bioproducts. In order to overcome the recalcitrant nature of the biomass, it is important to fully understand how cell wall components are synthesized and assembled. Xylan is one of the hemicellulosic components of the wall that contributes to recalcitrance. Xylan has substitutions on the backbone that are formed by the orchestration of many enzymes. For example, glucuronoxylan methyltransferases are responsible for …


Phytochemical Investigation Of Alkaloid Fractions Of Fumaria Vaillantii And F. Asepala And Their Antifungal Influence On Gene Expression Pattern In Aspergillus Species, Monir Mohseni, Azra Ataie Azimi, Babak Delnavaz Hashemloian, Mozhgan Farzamisepehr Jan 2023

Phytochemical Investigation Of Alkaloid Fractions Of Fumaria Vaillantii And F. Asepala And Their Antifungal Influence On Gene Expression Pattern In Aspergillus Species, Monir Mohseni, Azra Ataie Azimi, Babak Delnavaz Hashemloian, Mozhgan Farzamisepehr

Turkish Journal of Botany

The genus Fumaria is known for its strong medicinal effects. This research aimed to assess the phytochemical profile in various alkaloid fractions from Fumaria vaillantii Loisel and Fumaria asepala Boiss. grown in the Saveh region of the central province of Iran and their antifungal activity against Aspergillus flavus and Aspergillus niger was investigated in laboratory conditions. Also, the types and amount of alkaloid compounds and the effect of compounds on the expression of key genes of aflatoxin biosynthesis were conducted in order to investigate the ability of alkaloids of two Fumaria species to prepare environmentally friendly disinfectants. The total alkaloid …


Diversity Of Endolichenic Fungi Within Lichen Genus Parmotrema From India, Jyotsna Chakarwarti, Sanjeeva Nayaka, Suchi Srivastava Jan 2023

Diversity Of Endolichenic Fungi Within Lichen Genus Parmotrema From India, Jyotsna Chakarwarti, Sanjeeva Nayaka, Suchi Srivastava

Turkish Journal of Botany

: The lichens serve as an ecological niche for a group of unexplored fungal species residing inside their thallus without causing any noticeable symptoms and such fungi are termed as endolichenic fungi. The objective of the current study is to check the endolichenic fungal diversity within lichen genus Parmotrema. The study resulted in a total of 450 endolichenic fungi (ELF) isolates from 15 species of Parmotrema. Out of these, 73 sporulating isolates were identified using ITS sequences which resulted in 47 species under 23 genera. The phylogenetic assemblage of the fungi comprised Sordariomycetes (84.50%), Dothideomycetes (5.63%), Eurotiomycetes (7.04%), Pezizomycetes (1.40%), …


Tanacetum Isfahanicum (Compositae-Anthemideae), A New Species From Iran And Its Phylogenetic Position Based On Nrdna Its Data, Maryam Naderifar, Ali Sonboli, Shahrokh Kazempour Osaloo Jan 2023

Tanacetum Isfahanicum (Compositae-Anthemideae), A New Species From Iran And Its Phylogenetic Position Based On Nrdna Its Data, Maryam Naderifar, Ali Sonboli, Shahrokh Kazempour Osaloo

Turkish Journal of Botany

Tanacetum isfahanicum Sonboli and Naderifar (Compositae-Anthemideae) is described as a new species from Isfahan and Fars provinces of Iran. It belongs morphologically to Tanacetum sect Xanthoglossa and differs from its the closest relative, T. polycephalum, by shape of basal and cauline leaves, shape of capitula, length and width of involucre and color of achene ribs. The phylogenetic position of the new species within the genus Tanacetum is established based on nrDNA ITS sequences variation and its close relationship with T. polycephalum is corroborated.


Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega Jan 2023

Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega

Theses and Dissertations

As short genomic markers, DNA barcodes can play a role in conservation by identifying cryptic species and hybrids when morphological approaches fall short. Here we present our application of barcodes to the identities of two wetland taxa as part of an ongoing floristic inventory of Van Cortlandt Park (VCP), Bronx, NY. Previous barcode data by Marriott et al. (2018) identified the VCP lake water lily as the exotic Nymphaea alba, rather than the native N. odorata as historically described. In addition, cattails in the park were historically identified as the native Typha latifolia and the exotic T. angustifolia …


Quantifying The Carbon Stored And Sequestered By The Trees On Pomona College’S Campus, Paola A. Giron-Carson Jan 2023

Quantifying The Carbon Stored And Sequestered By The Trees On Pomona College’S Campus, Paola A. Giron-Carson

Scripps Senior Theses

We are experiencing a climate crisis that must be confronted with strategic mitigation. Pomona College contributes to the climate crisis through its emissions for which there is a baseline record. However there is no baseline record of the climate mitigation currently performed by the trees on Pomona’s campus through carbon storage. This study seeks to determine a current baseline quantity of carbon stored and sequestrated by Pomona’s trees as well as possible courses of climate mitigation for Pomona College to take. Initial information gathering was conducted through interviews with several stakeholders. This study was conducted using data collected prior to …


Seed Morphology Of Some Plantago (Plantaginaceae) Species In Iran And Its Systematic And Phylogenetic Implications, Saeed Mohsenzadeh, Masoud Sheidai, Fahimeh Koohdar Jan 2023

Seed Morphology Of Some Plantago (Plantaginaceae) Species In Iran And Its Systematic And Phylogenetic Implications, Saeed Mohsenzadeh, Masoud Sheidai, Fahimeh Koohdar

Turkish Journal of Botany

Plantago is a cosmopolitan genus with approximately 200 species and various infrageneric classifications have been reported. In this study, the seed morphologies of 19 species of Plantago from Iran were studied and documented in detail using scanning electron microscopy and light microscopy. The studied species were grouped by using statistical analyses such as a minimum spherical cluster method based on Euclidean distance, principal coordinate analysis, and multidimentional scaling. We have described four types based on the seed shape and states of the inner side of the studied seeds: convex- angular type, convex-elliptic type, flat-elliptic type, and concave-elliptic type. In this …


Dynamics Of Co2 Consumption, And Biomass And Lipid Carbon Production During Photobioreactor Cultivation Of The Diatom Cyclotella, Altan Özkan Jan 2023

Dynamics Of Co2 Consumption, And Biomass And Lipid Carbon Production During Photobioreactor Cultivation Of The Diatom Cyclotella, Altan Özkan

Turkish Journal of Botany

Understanding of CO2 delivery and consumption dynamics in algal photobioreactors are critical to unravel microalgae?s full potential for bioproduct generation and carbon capture from flue gas streams. This study aims to expand our current understanding by cultivating the diatom Cyclotella under controlled process conditions of a bubble column photobioreactor and analyzing CO2 consumption dynamics in real time using results from an online CO2 sensor connected to the reactor exhaust. Two sets of experiments were conducted: they served to contrast the influence of silicon and nitrate (Si&N colimitation) and Si limitation, and the light availability, respectively. CO2 consumption …


A New Species Of Arrhenia (Agaricales, Hygrophoraceae) From Guizhou Province, China, Jing Wang, Huan Gao, Dong Mei Liu, Chun Ying Deng, Shao Qi Zhou Jan 2023

A New Species Of Arrhenia (Agaricales, Hygrophoraceae) From Guizhou Province, China, Jing Wang, Huan Gao, Dong Mei Liu, Chun Ying Deng, Shao Qi Zhou

Turkish Journal of Botany

Arrhenia nivea is a new bryophilous species of Arrhenia from a valley in southwestern China'a subtropical monsoon humid climate zone.The species is characterized by pure white basidiomata with an irregularly discoid to cupulate 1.5-4.5 mm diameter pileus, reduced hymenium, nonamyloid basidiospores, lack of cystidia, the presence of clamps, and no incrusted pigment of the pileipellic hyphae. Phylogenetic analysis using ITS sequence data confirmed that it arised from a pathway separate from other species of Arrhenia.


Hplc-Uv Analysis Of Phenolic Compounds And Biological Activities Of Padina Pavonica And Zanardinia Typus Marine Macroalgae Species, Hati̇ce Banu Keski̇nkaya, Ebru Deveci̇, Bahar Yilmaz Altinok, Numan Emre Gümüş, Emi̇ne Şükran Okudan Aslan, Cengi̇z Akköz, Serdar Karakurt Jan 2023

Hplc-Uv Analysis Of Phenolic Compounds And Biological Activities Of Padina Pavonica And Zanardinia Typus Marine Macroalgae Species, Hati̇ce Banu Keski̇nkaya, Ebru Deveci̇, Bahar Yilmaz Altinok, Numan Emre Gümüş, Emi̇ne Şükran Okudan Aslan, Cengi̇z Akköz, Serdar Karakurt

Turkish Journal of Botany

The marine macroalgae species are recognized as the food of the future with excellent bioactive properties. This study aimed to investigate phenolic compounds; cytotoxic, antibacterial, and antioxidant activities; total phenolic (TPC) and flavonoid (TFC) contents of the methanol, ethanol, and water extracts of Padina pavonica (PP) and Zanardinia typus (ZT). To the best of our knowledge, this is the first report in which ZT was evaluated in terms of phenolic content, antioxidant, antibacterial, and cytotoxic activities. The HPLC analysis allowed the identification of five phenolic compounds containing rutin (0.31 ± 0.04 ? 3.00 ± 0.21 ppm) in all extracts and …


Competition And Herbivory Influence The Survival, Growth, And Physiology Of Native Tree Seedlings In The Kentucky Inner Bluegrass Savanna-Woodland, James D. Shaffer Jan 2023

Competition And Herbivory Influence The Survival, Growth, And Physiology Of Native Tree Seedlings In The Kentucky Inner Bluegrass Savanna-Woodland, James D. Shaffer

Theses and Dissertations--Biology

Terrestrial plant communities are shaped by competition for resources, herbivory, and abiotic processes. Savanna systems represent a dynamic coexistence of contrasting life forms (grasses and trees) shaped by competition and disturbance. The Kentucky Inner Bluegrass Savanna-Woodland (KIBSW) is described as an open woodland of shade intolerant species; however, climatic, and edaphic conditions can support closed-canopy forest. After European pioneer settlement (c1750-1800), over 99% of “savanna-woodlands” have been lost. KIBSW remnants are experiencing a recruitment failure, leading to a dominance shift in tree communities. I researched how tree-grass competition and mammalian herbivory influence KIBSW regeneration and maintenance. The KIBSW does not …


Correction To: Genetic Characterization And Expression Analysis Of Wheat (Triticum Aestivum) Line 07or1074 Exhibiting Very Low Polyphenol Oxidase (Ppo) Activity, S. M. Hystad, J. M. Martin, R. A. Graybosch, M. J. Giroux Jan 2023

Correction To: Genetic Characterization And Expression Analysis Of Wheat (Triticum Aestivum) Line 07or1074 Exhibiting Very Low Polyphenol Oxidase (Ppo) Activity, S. M. Hystad, J. M. Martin, R. A. Graybosch, M. J. Giroux

Department of Agronomy and Horticulture: Faculty Publications

The above mentioned article was published in 2015 with an error in the naming of one of the allele sequences for the PPO gene on the D genome. The PPO-D1f allele was incorrectly named as it is identical to the PPO-D1c allele previously published in GenBank by the authors on March 11th, 2014. An alignment between the previously published PPOD1c allele and a resequencing of the parental line 07OR1074 shows that the PPO-D1f allele is identical to the PPO-D1c allele. The allele in the paper referred to as PPO-D1f should be treated as PPO-D1c and can be accessed at NCBI …


Estimating The Genetic Parameters Of Yield-Related 1 Traits Under Different Nitrogen Conditions In Maize, Semra Palali Delen, Gen Xu, Jenifer Velazquez-Perfecto, Jinliang Yang Jan 2023

Estimating The Genetic Parameters Of Yield-Related 1 Traits Under Different Nitrogen Conditions In Maize, Semra Palali Delen, Gen Xu, Jenifer Velazquez-Perfecto, Jinliang Yang

Department of Agronomy and Horticulture: Faculty Publications

Understanding the genetic basis responding to nitrogen (N) fertilization in crop production is a long-standing research topic in plant breeding and genetics. Albeit years of continuous efforts, the genetic architecture parameters, such as heritability, polygenicity, and mode of selection, underlying the N responses in maize remain largely unclear. In this study, about n = 230 maize inbred lines were phenotyped under high N (HN) and low N (LN) conditions for two consecutive years to obtain six yield-related traits. Heritability analyses suggested that traits highly responsive to N treatments were less heritable. Using publicly available SNP genotypes, the genome-wide association study …


Interaction Of Quizalofop-P-Ethyl With 2,4-D Choline And/Or Glufosinate For Control Of Volunteer Corn In Corn Resistant To Aryloxyphenoxypropionates, Mandeep Singh, Vipan Kumar, Stevan Z. Knezevic, Suat Irmak, John L. Lindquist, Santosh Pitla, Amit J. Jhala Jan 2023

Interaction Of Quizalofop-P-Ethyl With 2,4-D Choline And/Or Glufosinate For Control Of Volunteer Corn In Corn Resistant To Aryloxyphenoxypropionates, Mandeep Singh, Vipan Kumar, Stevan Z. Knezevic, Suat Irmak, John L. Lindquist, Santosh Pitla, Amit J. Jhala

Department of Agronomy and Horticulture: Faculty Publications

Corn resistant to aryloxyphenoxypropionates (FOPs) (Enlist™ corn) enables the use of quizalofop-p-ethyl (QPE) as a selective postemergence (POST) herbicide for control of glufosinate/glyphosate-resistant corn volunteers. Growers usually mix QPE with 2,4-D choline and/or glufosinate to achieve broad-spectrum weed control in Enlist™ corn. The objectives of this study were to (1) evaluate the efficacy of QPE applied alone or mixed with 2,4-D choline and/or glufosinate for control of glufosinate/glyphosate-resistant corn volunteers in Enlist™ corn and (2) determine the impact of application time (V3 or V6 growth stage of volunteer corn) of QPE-based treatments on volunteer corn control as well as Enlist™ …


The Biggest Grower: A Youth Gardening Competition For Growing Specialty Crops And Urban Farmers, Stacy A. Adams, Terri James Jan 2023

The Biggest Grower: A Youth Gardening Competition For Growing Specialty Crops And Urban Farmers, Stacy A. Adams, Terri James

Department of Agronomy and Horticulture: Faculty Publications

Youth today have tendencies for unhealthy lifestyles, being sedentary, consuming high fat diets low in fruits and vegetables, all contributing to child obesity, Type 2 diabetes, hypertension, and precedence for life-long health concerns. For rural and economically disadvantaged urban households, poor diet is directly attributed to the inaccessibility of fresh produce, affordability and understanding of preparation of various specialty crops. Through a grant from the NE Specialty Crop Block Funding Program, The Biggest Grower Competition (BGC) was developed as a summer extension education program for youth in 8th through 12th grade. Project goals included; provide educational materials on …


Nuclear Phylogeny And Insights Into Whole-Genome Duplications And Reproductive Development Of Solanaceae Plants, Jie Wang, Weibin Xu, Junwen Zhai, Yi Hu, Jing Guo, Caifei Zhang, Yiyong Zhao, Lin Zhang, Christopher T. Martine, Hong Ma, Chien-Hsun Huang Jan 2023

Nuclear Phylogeny And Insights Into Whole-Genome Duplications And Reproductive Development Of Solanaceae Plants, Jie Wang, Weibin Xu, Junwen Zhai, Yi Hu, Jing Guo, Caifei Zhang, Yiyong Zhao, Lin Zhang, Christopher T. Martine, Hong Ma, Chien-Hsun Huang

Faculty Journal Articles

Solanaceae, the nightshade family, have ∼2700 species, including the important crops potato and tomato, ornamentals, and medicinal plants. Several sequenced Solanaceae genomes show evidence for whole-genome duplication (WGD), providing an excellent opportunity to investigate WGD and its impacts. Here, we generated 93 transcriptomes/genomes and combined them with 87 public datasets, for a total of 180 Solanaceae species representing all four subfamilies and 14 of 15 tribes. Nearly 1700 nuclear genes from these transcriptomic/genomic datasets were used to reconstruct a highly resolved Solanaceae phylogenetic tree with six major clades. The Solanaceae tree supports four previously recognized subfamilies (Goetzeioideae, Cestroideae, Nicotianoideae, …


Morphological And Genetic Analysis Of The Root System In Two American Grapevines (Vitis Species), Parinaz Mohtasebi Jan 2023

Morphological And Genetic Analysis Of The Root System In Two American Grapevines (Vitis Species), Parinaz Mohtasebi

Graduate Theses/Dissertations

The North American grapes species Vitis rupestris Scheele and Vitis riparia Michx have been the pillars of rootstock breeding for many decades. Though a large body of viticultural knowledge has been accumulated on their impact on grafted scions, the genetic basis of their root system architecture (RSA) has received limited scientific attention. In this study, I generated and analyzed adventitious root systems from dormant cuttings of 22 V. riparia and 19 V. rupestris accessions, as well as 162 interspecific F1 hybrid progeny from a cross between V. rupestris (♀) and V. riparia (♂). I photographed the roots and then extracted …


Forage Grass Growth Habit And Allelopathy In Birdsfoot Trefoil Germination And Establishment, Nathan El Blake Jan 2023

Forage Grass Growth Habit And Allelopathy In Birdsfoot Trefoil Germination And Establishment, Nathan El Blake

Graduate Theses, Dissertations, and Problem Reports (ETD)

Birdsfoot trefoil (Lotus corniculatus L.) (BFT) is a high quality, tanniniferous forage legume that has been shown to mitigate gastrointestinal nematode (GIN) infection in sheep. Reliable establishment of birdsfoot trefoil in existing pastures is difficult due to BFT’s poor seedling vigor, susceptibility to crown and root rot, and, perhaps chiefly, competition from other pasture plants. Most existing pastures in the Northeastern United States are primarily composed of cool-season grasses, many of which can be highly competitive. A common form of interplant competition is allelopathy, which occurs when secondary metabolites produced by a plant inhibit a necessary growth process of …


The Collaboration Between Art And Botany, Hee So, Sierra Beecher Jan 2023

The Collaboration Between Art And Botany, Hee So, Sierra Beecher

Undergraduate Research Posters

Using past research from my work study with Dr. Beecher where a team of students focused on quantitative and diagnostic anatomies of salt marsh and beach grasses on the Atlantic coasts, I used the research collected and created vector-based diagrams that were easily readable for Biology students at VCU. These illustrations were used in a manuscript we have been preparing, which has been accepted by the “Castanea” scientific journal. During the research fellowship, I was able to design a poster that portrayed the benefits of collaboration between art and botany, and Dr. Beecher presented the poster at the ASPB conference …


Boron Toxicity Induces Sulfate Transporters At Transcriptional Level In Arabidopsis Thaliana, Ceyhun Kayihan, Emre Aksoy, Su Naz Mutlu Jan 2023

Boron Toxicity Induces Sulfate Transporters At Transcriptional Level In Arabidopsis Thaliana, Ceyhun Kayihan, Emre Aksoy, Su Naz Mutlu

Turkish Journal of Botany

Plants activate glutathione (GSH)-dependent detoxification pathways at biochemical and molecular levels under boron (B) toxicity. Sulfate uptake and transport are necessary for GSH biosynthesis in plants. Therefore, the transcriptional regulation of some sulfate transporters was determined in this study to clarify the importance of these transporters in leaf and root tissues of Arabidopsis thaliana under toxic B conditions. The expression level of SULTR1;3 was dramatically increased in leaf and root tissues under moderate and severe toxic B conditions, suggesting source-to-sink sulfate translocation under B toxicity. Stable expression levels of SULTR2;1, SULTR2;2, and low SULTR3;5 expression might restrict the sulfate movement …


Ecological Quality Status Of The Turkish Coastal Waters By Using A Marine Macrophytic Biotic Index (Eei-C), Ergün Taşkin, İbrahi̇m Tan, Murat Çakir, Özge Sungur, Orki̇de Mi̇nareci̇, Ersi̇n Mi̇nareci̇, Hakan Atabay Jan 2023

Ecological Quality Status Of The Turkish Coastal Waters By Using A Marine Macrophytic Biotic Index (Eei-C), Ergün Taşkin, İbrahi̇m Tan, Murat Çakir, Özge Sungur, Orki̇de Mi̇nareci̇, Ersi̇n Mi̇nareci̇, Hakan Atabay

Turkish Journal of Botany

The present study includes the results of the second benthic macrophytes? monitoring period of a survey of ecological status from the Turkish coasts. The biotic index Ecological Evaluation Index (EEI-c) was used to assess the ecological status classes (ESC) and MA-LUSI the anthropogenic pressures. Sampling was made by the quadrat (20 × 20 cm) method, and the samples were collected from 93 sites in Turkish coastal waters between 2017 and 2019. In total, 240 taxa were found in the Turkish marine waters. Forty sites were classified into High ESC, 24 sites into Good, 12 sites into Moderate, 13 sites into …


A New Annual Satureja (Lamiaceae) Species From Turkey With Molecular Evidence, And Lectotypification Of Two Species, Hayri̇ Duman, Tuncay Di̇rmenci̇, Taner Özcan Jan 2023

A New Annual Satureja (Lamiaceae) Species From Turkey With Molecular Evidence, And Lectotypification Of Two Species, Hayri̇ Duman, Tuncay Di̇rmenci̇, Taner Özcan

Turkish Journal of Botany

A new species, Satureja hasturkii, is described using morphological characters and molecular studies in this study. The new species is closely related to S. hortensis but differs from it by very lax thyrsoid inflorescence, longer pedicels, shorter calyx, upper and lower calyx teeth, and corolla. In order to support the morphological data, molecular studies are also done using nrITS and cptrnL-F gene regions. nrITS data gives better results in phylogenetic analysis. It is pointed out that the closest relatives of S. hasturkii are S. hortensis and S. laxiflora. The fact that having annual life forms of …


Activated Charcoal Alleviates Fluoride Stress By Restricting Fluoride Uptake And Counteracting Oxidative Damages In The Rice Cultivar Mtu1010, Ankur Singh, Swarnavo Chakraborty, Aryadeep Roychoudhury Jan 2023

Activated Charcoal Alleviates Fluoride Stress By Restricting Fluoride Uptake And Counteracting Oxidative Damages In The Rice Cultivar Mtu1010, Ankur Singh, Swarnavo Chakraborty, Aryadeep Roychoudhury

Turkish Journal of Botany

This work was aimed to explore the efficacy of activated charcoal (5 mg g-1 soil) in abating fluoride (25 mg L-1 NaF) stress in rice seedlings, since the protective role of charcoal is widely reported against other forms of abiotic stress. Application of NaF solution reduced germination rate, dry and fresh weight, and shoot and root length of seedlings. Extensive fluoride accumulation lowered the chlorophyll level along with higher electrolyte leakage and formation of H2 O2 , malondialdehyde, and methylglyoxal. Administration of activated charcoal lowered the extent of oxidative damages by inhibiting the uptake of fluoride ions. Exogenous …


Drought Stress Effects On Morphophysiological And Quality Characteristics Of Commercial Carrot Cultivars, Muhammad Daniyal Junaid, Zahi̇de Nesli̇han Öztürk, Ali̇ Fuat Gökçe Jan 2023

Drought Stress Effects On Morphophysiological And Quality Characteristics Of Commercial Carrot Cultivars, Muhammad Daniyal Junaid, Zahi̇de Nesli̇han Öztürk, Ali̇ Fuat Gökçe

Turkish Journal of Botany

The effects of drought stress on plant growth and development are getting more pronounced due to increasing influence of climate change on environmental stresses. Current study was devised to explore the drought effects on eight commercial carrot cultivars, having different root colors as a base for further studies to understand the response of carrot. Drought stress for 10 days was applied to carrot plants at taproot formation stage in semicontrolled greenhouse. The results revealed that orange and yellow colored carrot cultivars exhibited the least decline in physiological functioning (relative water contents and dry matter) that assisted in maintaining higher yield …


Bioaccumulation Of Four Metals In The Same Genus Mosses (Barbula Hedw.) And Soil Pollution Assessment In An Abandoned Karst Bauxite Tailing Area, Dengfu Wang, Qimei Wu, Zhaohui Zhang Jan 2023

Bioaccumulation Of Four Metals In The Same Genus Mosses (Barbula Hedw.) And Soil Pollution Assessment In An Abandoned Karst Bauxite Tailing Area, Dengfu Wang, Qimei Wu, Zhaohui Zhang

Turkish Journal of Botany

Soil metal pollution is a concern in bauxite tailing areas. This study aimed to effectively screen plants with strong tolerance to metal contamination by analyzing the levels of metals in Barbula rigidula (Hedw.) Mild. (BR), Barbula indica (Hook.) Spreng. (BI), and Barbula vinealis Brid. (BV) and in soils. The contents of metals in mosses obtained from the bauxite tailing area followed the following order: Al > Fe > Zn > Cu. Furthermore, the levels of these metals were highest in BR, followed by BI and BV. However, concentrations of Al (12,220-87,080 mg/kg), Fe (8520-62,690 mg/kg), Cu (98.5-185.4 mg/kg), and Zn (208.2-352.6 mg/kg) in …


Improvements In The Phylogeny Of Epilobium And Chamaenerion Inferred From Nrdna And Cpdna Data Focusing On Türkiye, Suzan Kundakçi, Serdar Makbul, Mutlu Gültepe, Murat Erdem Güzel, Seda Okur, Kami̇l Coşkunçelebi̇ Jan 2023

Improvements In The Phylogeny Of Epilobium And Chamaenerion Inferred From Nrdna And Cpdna Data Focusing On Türkiye, Suzan Kundakçi, Serdar Makbul, Mutlu Gültepe, Murat Erdem Güzel, Seda Okur, Kami̇l Coşkunçelebi̇

Turkish Journal of Botany

Epilobium and Chamaenerion included 165 and 8 species over the world, respectively. The members of the genera are distributed particularly in moist habitats from subpolar to tropical regions.This paper aims to provide improvements in the phylogeny of the genera Epilobium and Chamaenerion using Internal Transcribed Spacer (ITS) of nuclear DNA and matK gene sequence data evaluation with maximum parsimony, maximum likelihood, and Bayesian inference criterations. A total of 188 individual accessions belonging to 28 taxa were newly generated and 110 sequences imported from GenBank (NCBI) were analysed. The nrDNA and plastid DNA gene trees supported to treat Epilobium and Chamaenerion …


Histochemical And Surface Microstructural Analyses Of Floral Cuticles Provide Evidence For Differential Behaviors In Scent Volatiles Emission In Two Tuberoses (Agave Amica (Medik.) Theide And Govaerts) Cultivars From Asparagaceae, Raktim Bhattacharya, Adinpunya Mitra Jan 2023

Histochemical And Surface Microstructural Analyses Of Floral Cuticles Provide Evidence For Differential Behaviors In Scent Volatiles Emission In Two Tuberoses (Agave Amica (Medik.) Theide And Govaerts) Cultivars From Asparagaceae, Raktim Bhattacharya, Adinpunya Mitra

Turkish Journal of Botany

Two popular cultivars of tuberose (Agave amica (Medik.) Theide and Govaerts syn. Polianthes tuberosa L.) from the family Asparagaceae, widely cultivated for floricultural purposes are ,'Calcutta Single' (CS) and 'Calcutta Double' (CD). It was evidenced that CS flowers emit intense scent volatiles as compared to CD flowers, while CD flowers retained higher contents of internal pool of scent volatiles than CS flowers. Such contrasting observations between the flowers of two cultivars suggest the role of possible barriers such as cuticles that prevent the emission of scent volatiles. The cuticular structure of both cultivars was studied using different histochemical approaches, …


The Assessment Of Genetic Diversity And Population Structure Of Endemic Scutellaria Yildirimlii (Lamiaceae) For Conservation Purposes, Merve Yildirim, Gül Ni̇lhan Tuğ, Ahmet Emre Yaprak Jan 2023

The Assessment Of Genetic Diversity And Population Structure Of Endemic Scutellaria Yildirimlii (Lamiaceae) For Conservation Purposes, Merve Yildirim, Gül Ni̇lhan Tuğ, Ahmet Emre Yaprak

Turkish Journal of Botany

Scutellaria yildirimlii is an endangered perennial endemic species from Turkey and belongs to the family Lamiaceae, which has a high number of medicinal and aromatic plants. It is crucial to determine genetic diversity and population structure of this species for its conservation measures; therefore, 111 individuals from five natural populations of S. yildirimlii were investigated by using 15 inter simple sequence repeats (ISSR) primers. The percentage of polymorphic loci (PPL), Nei?s gene diversity (H), and Shannon?s information index (I) at the species and population-level were determined as 93.9%, 0.183, 0.292 and 56.5%, 0.158, 0.242, respectively. The analysis of molecular variance …


The Effect Of Grafting On Pollen Fertility And Seed Production Of Diploid Interspecific Hybrid And Tetraploid Eggplant Genotypes, Sebahatti̇n Çürük, İlknur Külahlioğlu Çeği̇l Jan 2023

The Effect Of Grafting On Pollen Fertility And Seed Production Of Diploid Interspecific Hybrid And Tetraploid Eggplant Genotypes, Sebahatti̇n Çürük, İlknur Külahlioğlu Çeği̇l

Turkish Journal of Botany

Solanum melongena is susceptible to diverse diseases and parasites, in particular the wilts (bacterial, Fusarium and Verticillium), nematodes, and some insects. Solanum torvum is robust to Verticillium and some bacterial wilts and root-knot nematode. It was reported that interspecific hybrid plants originated out of the hybridization of these species were sterile. In our previous studies that have been carried out to overcome this interspecific hybridization barrier, only from Faselis F1 that was used as the female parent, many interspecific hybrid seeds were obtained and 9.07% of the seeds grew into plants in vitro. The percentage of pollen viability and germination …


Protective Potential Of Mokko Lactone From Cheilocostus Speciosus (J. Koenig) C.D.Specht (Costaceae) Rhizomes Against Fulminant Hepatic Failure, Ahmed Altyar, Ikhlas Sindi, Dina El-Agamy, Wael Elsaed, Ahmed Shehata, Hossam Abdallah, Gamal Mohamed, Abdelsattar Omar, Sabrin Ibrahim Jan 2023

Protective Potential Of Mokko Lactone From Cheilocostus Speciosus (J. Koenig) C.D.Specht (Costaceae) Rhizomes Against Fulminant Hepatic Failure, Ahmed Altyar, Ikhlas Sindi, Dina El-Agamy, Wael Elsaed, Ahmed Shehata, Hossam Abdallah, Gamal Mohamed, Abdelsattar Omar, Sabrin Ibrahim

Turkish Journal of Botany

Cheilocostus speciosus (Syn: Costus speciosus) (Crepe or spiral ginger) is one of the species of the family Costaceae that is widely used in various traditional medicines for treating various ailments. Mokko lactone (ML) belongs to the guaianolide family of sesquiterpenes, which has been separated from C. speciosus. It showed noticeable antiinflammation and antioxidative capacities. The current study explored the ML hepatoprotective potential against FHF (fulminant hepatic failure) in mice. FHF was successfully established using intraperitoneal injection of ?-galactosamine (?-GalN, 700 mg/kg)/lipopolysaccharide (LPS, 10 µg/kg) in male Swiss-albino mice. The mice were pretreated with ML (20 or 40 mg/kg, orally) daily …