Botany Commons^™

Discovery: The Student Journal Of Dale Bumpers College Of Agricultural, Food And Life Sciences - Volume 26 2025, Several Authors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Letter From The Dean, Jeff Edwards

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Featured Faculty Mentor/Student Team, Kelly Loftin, Eva Berryhill

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Phylogenomics And Biogeography Of Zinniinae (Asteraceae: Heliantheae) Using Plastome And Nuclear Datasets, Samuel Victor Skibicki

Graduate Theses, Dissertations, and Problem Reports (ETD)

Zinniinae is a subtribe of plants in the daisy family (Asteraceae) and the sunflower tribe (Heliantheae). Traditionally, seven genera were included in the subtribe: Echinacea, Heliopsis, Philactis, Sanvitalia, Tehuana, Trichocoryne, and Zinnia. The subtribe is poorly understood from a phylogenetic and taxonomic standpoint, and I undertook a phylogenetic investigation of Zinniinae, using both the plastid genome (plastomes) and the nuclear genome, to learn more about the evolutionary history of this clade. Plastomes were assembled to build a phylogenetic tree, targeted sequence capture was used to compile the nuclear datasets, and a chronogram was created to estimate date ranges for …

Introduction To Hydroponics- 2025-2026 Workshop Handbook, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Hydroponically grown plants grow faster than traditional production systems, with greater productivity, greater palatability, and having optimal visual character. Three principal components of a system include the plant support platform, a nutrient solution reservoir, and an interface for the root-solution. This publication provides in-depth explanation to system design, evaluation of water quality, nutrient formulation, and prototype systems that can be easily constructed for those wanting to explore hydroponics, such as educators, organizational leaders, or home enthusiasts.

The Aussie Oddballs: Identifying The Existence Of Censer And Trample Burr Dispersal In Australian Bush Tomatoes, Abigail Motter

Honors Theses

Australian bush tomatoes in northern Western Australia likely have seed dispersal mechanisms that depend on processes outside of frugivory, which is unusual for this genus. Solanum tudununggae seeds are wind dispersed by the censer mechanism, meaning that seeds fall from holes in the top of the fruit when the branches move. In another species, piles of abscised and burr-like fruits have been found strewn around the bases of S. ossicruentum, possibly due to the extinction of animals that may have been a means of dispersal via epizoochory. In this study, we attempt to provide support for the theorized dispersal …

Microbial And Plant Biodiversity In Appalachian Agroecosystems And Their Implications For Soil Health, Kinsey Reed Close

Graduate Theses, Dissertations, and Problem Reports (ETD)

The sustainability of agricultural landscapes depends on understanding the complex interactions between plants, soil, and microbes. In Appalachia, a region shaped by complex terrain and long histories of human and ecological interaction, small family farms produce hay, livestock, and row crops. These agroecosystems, though often treated as “artificial” by many ecologists, have the potential to support both food production and biodiversity conservation if managed with an understanding of ecological complexity. This dissertation examines how plant and microbial diversity interact with soil and management to influence nutrient cycling, soil health, and long-term resilience in Appalachian agricultural systems. A literature review revealed …

A Mystery Of Microecology: Revealing The Ecological Relationship Between Allorhizobium Vitis And Missouri Native Grape Species, Hunter White

Graduate Theses/Dissertations

Crown gall disease can be very detrimental to grape and wine producers around the world by reducing vine vigor and yield. It is caused by the bacteria Allorhizobium vitis (A. Vitis) carrying a tumor inducing (Ti) plasmid. The A. vitis bacteria have been found in soil and cane tissues in vineyards around the world, and infect all cultivated grapes. However, there have been no reports of crown gall on native wild grapevines, and very little is known about the ecology of A. vitis in native ecosystems. I have sampled cambium tissues from three native wild grape species of …

The Effects Of Calcium Availability On Growth And Calcium Content Of Hydroponic Daikon Radish Microgreens, Cory Michael Reichmuth

Graduate Theses/Dissertations

Microgreens are young, edible seedlings harvested upon emergence of the first true leaf. Their popularity is growing as a nutritionally dense food source that can be grown quickly in space-efficient systems. However, little is known about optimal cultivation practices and the effects of fertilization on growth and nutrition of microgreens. This study investigates the role of calcium (Ca) fertilization in optimizing the growth, yield, and nutrient content of daikon radish (Raphanus sativus) microgreens. A hydroponic system was designed to consistently deliver nutrient solution to microgreens grown in a closed-environment chamber. This study tested different Ca fertilization rates of 0, 5, …

Phytochemical And Nutritional Composition Of Vernonia Amygdalina: Antioxidant, Antidiabetic Efficacy, And Hematological Benefits, Hassan A. Adewuyi, Messiah Atapia, Emmanuel Ochonung, Sakariyau A. Waheed, Adebimpe H. Oluwatoyin, Chizoba V. Obunadike, Adeleye A. Edema, Samad Hussein, Usman A. Mohammed, Kevin L. Sebastine, Tolulope O. Jaiyeola

Chemistry & Biochemistry Faculty Publications

Vernonia amygdalina, a traditionally used medicinal plant, has been purported to possess health-promoting properties. The aim of this study is to investigate the phytochemical and nutritional composition of V. amygdalina, evaluate its antioxidant and antidiabetic efficacy, and assess its hematological benefits. Phytochemical screening, proximate analysis, antioxidant assays (DPPH, ABTS), antidiabetic evaluations in treptozotocin induced diabetic rats, and hematological assessments were conducted according to standard protocol. V. amygdalina exhibited a rich phytochemical profile, comprising flavonoids, phenolic acids, and terpenoids, alongside significant antioxidant activity (IC50 = 12.5 μg/mL) and complete source of protein. Proximate analysis revealed high protein (21.1%) and …

“Nice To See You”: Addressing Plant Awareness Disparity With Locally Specific Ecological And Cultural Plant Education, Cecilia Muecke

Pomona Senior Theses

Plants form the basis of life on Earth. However, due to the phenomenon of plant awareness disparity, a self-perpetuating cycle whereby plants are overlooked on an individual and global level ensues. Lack of plant awareness leads to a lessened emphasis on plants in sustainability and conservation as well as biology education, resulting in negative impacts on biodiversity and food security. The severity of plant awareness disparity is dependent on cultural context, and Indigenous and/or traditional societies are less likely to experience plant awareness disparity because of they are typically more connected to plants for their everyday needs. Native plants are …

Rwanda's Natural Remedies: A Fresh Look At The Fight Against Malaria, Leandre Nsabimana Ndisanze

Pomona Senior Theses

Malaria remains one of the most devastating parasitic diseases globally, disproportionately affecting sub-Saharan Africa, where Rwanda continues to face high transmission rates and rising resistance to conventional interventions. Despite decades of control efforts, the emergence of drug-resistant Plasmodium falciparum and insecticide-resistant Anopheles mosquitoes threatens to reverse recent gains. This research responds to the urgent need for sustainable and culturally relevant alternatives by exploring the therapeutic potential of Rwandan traditional medicinal plants. These indigenous remedies, long used by local healers, offer an underexplored reservoir of bioactive compounds that may provide the basis for novel antimalarial drugs.

The central hypothesis of this …

A Vascular Flora Of The Sacatar Trail Wilderness, Sierra Nevada, California, Kimberly Schaefer Pivetti

CGU Theses & Dissertations

The Sacatar Trail Wilderness in Inyo and Tulare counties, California, encompasses a bioregional transition zone in the southeastern Sierra Nevada. The ca. 233 km 2 (90 mi 2 ) study area, located 32 km (20 mi) northwest of the city of Ridgecrest, ranges from 930 to 2698 m (3051–8851 ft) in elevation. The highly diverse California Floristic Province, Great Basin, and Mojave Desert converge in the region including the Wilderness creating conditions to support a broad spectrum of vegetation assemblages. The Bureau of Land Management has prohibited vehicular activity in this area since its wilderness designation in 1994; consequently, recent …

Assessing Genetic Diversity And Population Structure In The Imperiled Aconitum Reclinatum (White Monkshood), An Endemic Wildflower Of Central Appalachia, Diamanda A. Zizis

Master’s Theses

Aconitum reclinatum, white monkshood (Ranunculaceae), is a Pennsylvania critically imperiled plant species found in five states of the Appalachian region of the United States: Pennsylvania, West Virginia, Virginia, North Carolina, and Tennessee. This plant is adapted to cool, moist environments but faces threats from increasing habitat loss, deer browse, logging, and changes in rainfall and temperature associated with climate change. Comprehensive knowledge of A. reclinatum genetic population structure remains limited. To address this, we collaborated with Natural Heritage programs within the range of A. reclinatum to sample populations across the species distribution and generate a genotyping-by-sequencing data set of …

The Everyday Scientist: Down In The Weeds In The Heart Of The South, Pamela Zendt

Master's Projects

The Everyday Scientist: Down in the Weeds in the Heart of the South is a creative nonfiction capstone project that was released as a book. The narrative documents my two-year journey as a community scientist and explores how ordinary people contribute meaningfully to scientific research in the natural world. Rooted in my desire to connect my passion for the outdoors with the goals of the Master of Arts in Professional Writing program, this project illustrates that environmental science is not only for trained professionals. Instead, it thrives on the curiosity, dedication, and participation of volunteers who follow established protocols, collect …

Greenhouse Management For The Smaller Structure--Educational And Hobby, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

Greenhouses used for teaching or by hobbyist are smaller than those used for commercial production or found in the retail environment. Structural materials, covering, mechanical equipment, and control systems often are packaged as a kit made available through greenhouse suppliers. Supplier construction services may not be available, in which buyers must use local contractors to complete the installation. Greenhouses are unique structures that differ greatly from sheds or other outbuildings. They have coverings that allow maximum light transmittance, protected from UV degradation, and can handle wide inside to outside temperature extremes. This extension circular provides valuable information on the character, …

Terrarium- An Ecosystem In A Jar, Stacy A. Adams

Department of Agronomy and Horticulture: Faculty Publications

STEM education is supported through hand's-on activities in the classroom. Content understanding and reaffirmation of knowledge is supported through this informative STEM-Quick card that teachers or extension educators can distribute to participants for reference. Terrariums provide an example of a closed ecosystem where water and carbon cycling is demonstrated and plant growth can be observed. This card presents the steps to building and caring for an easy to create terrarium.

Stachys Matthewsii: Photo Essay Of A Rare Plant, W. John Hayden

Biology Faculty Publications

On the morning of June 14, 2021, while collecting bryophytes in Goochland County with my student, Mikayla Quinn, we stumbled upon a previously unknown population of stachys matthewsii, Yadkin's Hedge Nettle.

What’S In A Name? Anapodophyllon? Podophyllum? It’S Still Mayapple, W. John Hayden

Biology Faculty Publications

No abstract provided.

Best Management Practices: Sambucus Canadensis Propagation Techniques, Hannah Berendzen

Graduate Theses/Dissertations

American elderberry (Sambucus nigra ssp. canadensis) is a fruit-bearing shrub native to North America, traditionally utilized for medicinal and culinary purposes. In recent years, its popularity has surged due to emerging research supporting its immune-boosting properties. Despite its growing demand, standardized best management practices for elderberry cultivation, particularly propagation techniques, remain lacking. This study aims to clarify propagation recommendations by examining the influence cutting size and stem diameter on rooting success. A field study was conducted from February to May 2024, in which one-node and two-node dormant hardwood elderberry cuttings of varying stem diameters were planted in small …

Responses Of Native And Invasive Aquatic Vegetation To Changes In Water Depth In An Ozark Spring-Fed Pond, Daphne Miles

Graduate Theses/Dissertations

Spring-fed aquatic ecosystems in the Ozark Highlands are characterized by stable water depths, clear water, and diverse aquatic vegetation (filamentous algae, submerged, floating, and emergent plants). Sudden changes in water depth can impact aquatic vegetation dynamics but the impacts of prolonged changes are poorly understood. I investigated seasonal and annual changes to aquatic vegetation abundance in a spring impoundment during and after a two-year period of low water depth that was caused by a broken outlet below an artificial dam. Water depth was significantly lower in 2020 and 2021 (low water years), compared to 2022 and 2023 (high water years). …

Allodus Podophylli: The Infection Cycle Of Mayapple Rust, W. John Hayden

Biology Faculty Publications

This article addresses the parasitic fungus, Allodus podophylli, that causes Mayapple Rust. This disease is extremely common throughout the entire geographic range of Mayap-ple, Podophyllum peltatum, the 2025 VNPS Wildflower of the Year.

Wildflower Of The Year; Mayapple (Podophyllum Peltatum), W. John Hayden

Biology Faculty Publications

Mayapples are perennial herbaceous plants with thick fibrous roots that arise from a creeping rhizome.

Optimization Of Transformation And Regeneration In The Sunflower (Helianthus Annuus), Sara M. Kilar

Masters Theses

In addition to their value as prized ornamentals, sunflowers are important crop species due to the nutritional value and high oil content of the seeds. Sunflower oil is a significant contributor to global seed oil production, which can be used as a food additive and cooking agent as well as a raw material for biodiesel production. While traditional breeding efforts have led to the development of many unique cultivars, genetically modified variations have proven more difficult due to the recalcitrance of sunflower plants to genetic transformation. As a result, facile and efficient transformation methods for sunflowers have the potential to …

Functional Trait Responses Of Invasive Ludwigia Species Tocontrasting Hydrological Conditions, Rebecca E. Drenovsky, Rebecca Reicholf, Caryn Futrell, Blanca Gallego‐Tévar, Brenda J. Grewell

2025 Faculty Bibliography

Premise: Hydrological regime influences wetland plant species distribution andperformance. Global warming and extreme weather events are magnifying floodingpatterns, and understanding how invasive taxa respond across life stages (establish-ment vs. established phase) is important for predicting and managing their coloni-zation and spread. Our objective was to measure flood trait responses at contrastinglife stages in closely related congeners (Ludwigia peploides, diploid; L. hexapetala,decaploid; Onagraceae) differing in their invasiveness in the field.

Methods: In the field, we assessed phenological responses to seasonal hydrological changes,and in mesocosms, we assessed flood stress responses of establishing shoot fragments underdeep‐flooded, shallow‐flooded, and gradual drawdown hydrological …

Analyzing The Population Structure Of The Rhizobia Associated With Astragalus Lentiginosus, Joshua Adam Melnick

Dissertations

Legumes are an incredibly diverse and agriculturally important family of plants. They have a special relationship with symbiotic bacteria known as rhizobia which fix nitrogen into ammonia within nodules on their roots. Astragalus is the largest plant genus on Earth, and the species Astragalus lentiginosus is extraordinarily diverse, consisting of approximately 40 varieties. However, the rhizobia of A. lentiginosus have never been studied. In this study, root nodules were extracted from 17 varieties of A. lentiginosus to obtain rhizobial strains and metagenomes. A. lentiginosus primarily associates with rhizobia from the genera Mesorhizobium and Allomesorhizobium. There was little evidence of horizontal …

Functional Characterization Of Haloarchaeal Udp-Glucose 4-Epimerase And 3-Hydroxybutyryl-Coa Dehydrogenase Genes In Nicotiana Tabacum, Çi̇ğdem Otur, Sezer Okay, Aslihan Kurt Kizildoğan

Turkish Journal of Botany

The objective of the studyAbiotic stress poses a significant threat to plant survival. In response to the challenging conditions, plants have evolved various resistance mechanisms. Recently, genetic strategies have become increasingly prevalent in efforts to enhance abiotic stress tolerance and develop stress-resistant plant varieties. In this study, we employed heterologous expression of two metabolism-related haloarchaeal genes in the Nicotiana tabacum genome to improve its mechanism for salt and drought tolerance.Experimental procedure(s)The U2642 and CL165 genes encoding 3-hydroxybutyryl-CoA dehydrogenase and UDP-glucose 4-epimerase, respectively, were subcloned into the pIPKb004 vector under the control of Cauliflower mosaic virus 35S (CaMV35S) promoter using the …

Investigation And Computational Analysis Of The Iqd Gene Family In Common Bean (Phaseolus Vulgaris L.): Expression Profiling Under Salt Stress, Tarik Kirlioğlu, Aybüke Okay, Emi̇ne Sümer Aras, İlker Büyük

Turkish Journal of Botany

Common bean is one of the most nutritionally important legumes because of its high-quality protein content. While its genome has been widely studied however, the IQD gene family has not been extensively investigated in common bean to date. The IQD proteins (IQ-67 domain), a type of calmodulin-binding protein, are involved in plant growth and development, as well as the plant's response to environmental stressors. In this study, thirty-six PvIQD genes were discovered and their proteins were found to be classified into four groups according to the phylogenetic tree. The proteins which are encoded by PvIQD genes with similar exon-intron pattern …

Primary Distribution And Rt-Pcr-Based Detection Of Citrus Dwarfing Viroid (Cdvd) In Citrus Cultivars Of Pakistan, Zia Ul Haq, Amjad Ali, Syed A.H. Naqvi, Faheem Shehzad Baloch, Ummad U.D. Umar

Turkish Journal of Botany

Viroid diseases have emerged as a significant threat to citrus orchards globally. In Pakistan, viroid infections have rapidly spread across different citrus cultivar, posing serious challenges to the survival of orchards. This study encompasses the determination of the prevalence and detection of Citrus dwarfing viroid (CDVd) in both reported and newly introduced citrus cultivars in Pakistan using RT-PCR. RNA was extracted from 122 infected citrus samples and examined for the presence of viroids following the successful optimization of newly designed CDVd primers (CDVd AF1/AR1). This led to the confirmation of CDVd in 72 samples (59.01%).. Biological indexing was performed using …