Botany Commons^™

Natural Microbial Consortium Construction Strategy From Rhizospheric Agricultural Soils To Improve Wheat (Triticum Durum Desf.) Seedling Growth, Ni̇da Arslan, Mi̇ne Gül Şeker, Özlem Akkaya, Yelda Özden Çi̇ftçi̇

Turkish Journal of Botany

Microbial consortia of compatible microorganisms play a key role in enhancing agricultural sustainability by optimizing nutrient uptake by promoting plant growth more effectively. This study aimed to identify local isolates with the most effective plant growth-promoting (PGP) properties and to form a consortium of isolates showing the optimal synergistic effect between plant and bacterial components to improve the growth of wheat plants. For this purpose, 48 isolates identified from 145 isolates were screened for their PGP activities. According to the results, 16S rRNA gene sequencing was performed to identify the six isolates exhibiting the most promising activity. Different consortium groups …

Molecular Crosstalk Of Transcription Factors And Hormones In Drought Tolerance Genes In Plants, Cengi̇z Kaya

Turkish Journal of Botany

Water deficit is a critical challenge to global agricultural productivity and food security, which is exacerbated by climate change and increasing water scarcity. To withstand drought stress, plants employ a variety of molecular strategies driven by complex regulatory networks. This review examines the central role of transcription factors (TFs) as master regulators that activate drought responsive genes, which in turn mediate key adaptive processes such as osmoregulation, antioxidative defense, and membrane stability. A distinctive aspect of this review is its focus on the dynamic interplay between TFs and hormonal signaling pathways, including abscisic acid, ethylene, salicylic acid, and jasmonic acid. …

Taxonomic Revision Of Korean Salix Section Subviminales Based On Comparative Morphology And Complete Plastome Analysis, Young Moon Kim, Shukherdorj Baasanmunkh, Nudkhuu Nyamgerel, Won Seok Lee, Dong Chan Son, In Kyu Park, Bom Bi Jin, Hyo Sig Won, Hyeok Jae Choi

Turkish Journal of Botany

Salix section Subviminales, including only three species, is endemic to East Asia. In this study, we revised three species, S. gracilistyla, S. graciliglans, and S. blinii in Korea based on their plastomes and extensive morphological analyses to provide a comprehensive understanding of their taxonomic relationships. Based on our findings, we identified the morphological characteristics of S. blinii endemic to Korea, including its small size and distinct leaf shapes, which are well distinguished from both S. gracilistyla and S. graciliglans. Most of the morphological characteristics of S. gracilistyla and S. graciliglans overlapped, particularly leaf shape, floral structure, and growth habits. Next, …

Ecological Assessment Of Lentic Ecosystems In Ceyhan River Basin Using Phytoplankton Indices, Abuzer Çelekli̇, Emi̇ne Yonca Gümüş, Tolga Çeti̇n

Turkish Journal of Botany

Increasing exploitation of water resources has led to declining water quality in aquatic environments. Freshwater ecosystems face various environmental pressures, such as the impacts of climate change and intensifying land-use practices. This study aimed to assess the ecological preferences of phytoplankton communities and determine the ecological status (ES) of several reservoirs and lakes in Ceyhan River Basin across different seasons. A canonical correspondence analysis was conducted to understand the associations between phytoplankton assemblages and stressors in freshwater ecosystems, revealing a strong correlation of 97%. The factors that most influenced the distribution of phytoplankton species were electrical conductivity (EC), temperature, total …

A New Species From Türkiye: Erigeron Akaydinii (Asteraceae), Batikan Günal, Gürkan Semi̇z, Sultan Akyol

Turkish Journal of Botany

Erigeron akaydinii Günal & Semiz sp. nov., belonging to the Trimorpha Cass. (DC) section (Asteraceae), is described as a new species from Uludağ Mountain (Bursa, Türkiye). This study examines the diagnostic traits of E. akaydinii and related species, including morphological, palynological, and molecular analyses. Notes on the ecology, distribution, and conservation status of the new species are also provided, along with a diagnostic key for relevant taxa.

Genome-Wide Association Of Gene Regions Controlling Selenium And Magnesium Accumulation In Walnuts (Juglans Regia L.), İrem Büyükalgan, Bülent Yağmur, Erdal Orman, Muhammed Bahatti̇n Tanyolaç, Duygu Ateş

Turkish Journal of Botany

Walnut (Juglans regia L.) is one of the most economically important species. It is of great importance to the food industry due to its nutritional value, and high content of many beneficial components such as macro and microelements. In the current study, the aim was to determine markers of single nucleotide polymorphism (SNP) associated with the gene(s) controlling the accumulation of Selenium (Se) and Magnesium (Mg) in walnuts. Se and Mg concentrations were measured in 154 genotypes of Juglans regia in 2021 and 2022. A total of 16,473 SNP markers were used for association mapping to analyze the marker-trait associations. …

A New Coralloid Arecoid Palm Root Mat From The Deccan Intertrappean Beds Of India And Its Significance, Sanchita Kumar, Robert Spicer, Mahasin Ali Khan

Turkish Journal of Botany

A new fossil-species of coralloid palm root mat under the organ genus Rhizopalmoxylon is reported from the latest Maastrichtian (Late Cretaceous) to earliest Danian (Early Palaeocene) sediments (c. 66–65Ma) of the Deccan Intertrappean Beds of Madhya Pradesh, Central India. The significant anatomical attributes, specifically an exodermis comprising 2–4 layered parenchymatous cells; a 5–8 layered homogeneous outer cortex, a highly lacunate inner cortex central diffuse layer of aerenchyma with well-developed radially elongated cells arranged in 2–4 rows, and a stele consisting of radial and exarch vascular bundles with proto and metaxylem strands reveal its close resemblance to root mats of extant …

Complete Genome Analyses Of A Novel Narlivirus Identified In The Ectomycorrhizal Fungus Amanita Vidua, Ilgaz Akata, Eda Kumru, Gülce Edi̇ş, Ertuğrul Kaya, Ergi̇n Şahi̇n

Turkish Journal of Botany

The widespread utilisation of deep sequencing has dramatically enhanced and revolutionised our understanding of virus diversity, particularly in complex environments such as soil and biological samples. This research explored mycovirus sequence analyses in the ectomycorrhizal fungus Amanita vidua, utilising deep sequencing alongside total double-stranded RNA (dsRNA) extractions. Our investigation unveiled a unique member of the proposed family, Narliviridae, designated as Amanita vidua narlivirus 1 (AvNV1), in an A. vidua specimen. AvNV1, classified under Amabiliviricetes, possesses a distinct genome structure and sequence attributes. T horough analyses indicated that AvNV1 exhibits sequence similarities with other mycoviruses from the proposed family Narliviridae and …

Unveiling The Physical Interaction Between Gsnor1 And Trx-H Isoforms, Anika Tabassum, Gary J. Loake

Turkish Journal of Botany

This study aims to investigate any possible interaction between two highly conserved regulators of cellular SNO levels: S-nitrosoglutathione reductase (GSNOR1) and thioredoxin (TRX). These two enzymes control global S-nitrosylation levels and thus impact the cellular redox state during immune responses. A mutant line (Δtrx1trx2sfa1) of Saccharomyces cerevisiae MaV203 strain was generated to explore this possibility rather than using a classical strain. We identified and characterized the physical interaction between GSNOR1 and Arabidopsis cytosolic h isoforms in a yeast two-hybrid screen. Out of the seven TRX isoforms, AtGSNOR1 displayed a high interaction with AtTRXh3, AtTRXh4, and AtTRXh5 (AtTRXh5>AtTRXh4 & AtTRXh3). …

Understanding Temporal Changes In Leaf Traits Of Native Smilax Rotundifolia And Invasive Lonicera Japonica Using Long-Term Herbarium Records From Kentucky, Claudia Ebbecke, Claudia Ebbecke

Honors College Theses

Herbarium specimens are the most valuable, verifiable, and sustainable records to study the impacts of climate change on natural ecosystems. Temporal herbarium data can provide critical information on how species respond to changes in habitat conditions by tracking changes in species’ morphological and phenological traits. This study aims to use Japanese honeysuckle (Lonicera japonica) and common greenbrier (Smilax rotundifolia) to assess the impact of climate change on invasive and native plants. Leaf traits, such as leaf size and stomatal density are good indicators of plant’s adaptation to the changing environment. By examining changes in leaf traits …

Genomic Structure Among Populations Of A Regionally Rare Perennial Plant Indicates The Need For Reevaluation Of Management Units, Cheyenne Moore, Angela J. Mcdonnell, Scott Schuette, Christopher T. Martine

Faculty Journal Articles

Conservation of rare species often relies on the delineation of management units and genomic tools can now be applied for this purpose. However, this is not as common on a local scale, where populations are often small and fragmented, despite the utility of informing conservation and management practice at the regional level. We use a genotyping by sequencing (GBS) approach to assess the perennial riparian plant species Baptisia australis (Fabaceae) in Pennsylvania, where the taxon is at the edge of its natural distribution and considered threatened. In this system, we investigate whether sampled subpopulations exhibit genetic structure. We find that …

Improving Nitrogen Management And Corn Productivity Through Enhanced Efficiency Fertilizer And Cover Crop Integration In Nebraska Cropping Systems, Madhusudhan Adhikari

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Effective nitrogen (N) management is vital for sustaining corn yield and reducing environmental impacts in Nebraska cropping systems. Three field studies were conducted to evaluate the impact of 1) fertilizer type (anhydrous ammonia [AA] with nitrification inhibitor: enhanced efficiency fertilizer [EEF] or AA without EEF) and N application timing (pre-plant vs. split with side-dress UAN) on in-season soil N availability, crop response, nitrous oxide (N₂O) emissions, residual soil N and N use efficiencies (NUEs); 2) winter cover crop (CC) species and crop rotation variability on CC biomass production, N uptake, soil N dynamics, and cash crop performance in …

Extending Cover Crop Growing Window To Improve The Health Of Environmentally Sensitive Soils, Noshin Ara Tunazzina

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Sloping and sandy soils are highly susceptible to degradation. The health of these soils could be improved with cover crops (CCs). However, CC effectiveness in improving soil health mainly depends on CC biomass production, which is often low in temperate regions. The question is: how can we increase CC biomass production? Lengthening the CC growing window can be a potential strategy. This study assessed how 1) interseeded and terminated early (2-3 weeks before crop planting) CC, 2) interseeded and terminated late (at crop planting) CC, 3) drilled (after harvest) and terminated early CC, 4) drilled and terminated late CC, and …

Patterns Of Fire History And Vegetation Changes In The Last 5000 Years: A Paleoecological Study Of Iquitos, Annabel Zwarts

Theses and Dissertations

The vegetation of the Amazonian rainforest is hypothesized to have been shaped by pre-Columbian activities, such as burning and palm management to various extents. Management of palms is hypothesized to have caused some of the most useful species to become hyperdominant in Amazonia. This study investigated the extent to which human activities over the past 5000 years affected palm abundances in mature lowland rainforests near Iquitos, Peru. I used phytoliths and charcoal from soil cores to determine the history of local floras, and modern palm surveys to compare modern phytolith occurrence with modern vegetation. Because pre-Columbian activity clustered along the …

Effects Of Plant Growth-Promoting Microorganisms On Microbial Community Dynamics And Plant Growth Responses Of Aeroponically Cultivated Spinach, Veronica Snow

All NMU Master's Theses

Regional food insecurity caused by the inability to use conventional farming techniques year-round in cold climates increases the need for access to quality, locally sourced, and affordable foods year-round. Shifting from a soil-based system to aeroponics can increase yields, as aeroponic systems are not weather-reliant and can operate year-round. Aeroponics, a subgroup of hydroponics, induces growth by misting nutrient-rich solutions onto the plant roots. These systems use space and water more efficiently and rely less on fertilizers and pesticides but are vulnerable to errors in nutrient application, power loss, and rapid pathogen spread. Adding Vermicompost (VCT) and plant growth-promoting microorganisms …

Chromosome Evolution Model Reveals Hidden Variation In Karyotype-Driven Speciation In Ferns, Thomas Buchloh

All Theses

Because karyotype change commonly generates reproductive isolation between diverging species, rapid karyotype evolution, like that seen in plants, may increase the total rate of diversification. However, few studies have investigated this predicted relationship. Tests of this prediction have identified a positive correlation between the rate of karyotype change (specifically whole genome duplications) and diversification, but tests have been restricted to relatively small and young clades. Fortunately, novel macroevolutionary models have recently become available to investigate patterns of karyotype evolution in large phylogenies, providing new opportunity to investigate variation in karyotype driven diversification. Ferns are one of the most karyotype rich …

Investigation Into Mycorrhizae Associated With Native Venus' Flytrap Root Tissue, Anna Carnaggio

Electronic Theses and Dissertations

Dionaea muscipula, a plant commonly known as the Venus' flytrap, is found native to the southeast corner of North Carolina and the northeast corner of South Carolina. Several populations of native Venus' flytraps are known to exist in the nutrient-poor peat bog conditions in and around Lewis Ocean Bay Heritage Preserve (LOBHP) in Northeastern South Carolina. Anthropogenic pressures in Horry County, specifically surrounding LOBHP, have resulted in a loss of habitat for several native and endangered species. As a result, conservation efforts are focused on relocating native Venus' flytraps into adjacent habitats to ensure survival. This is only a temporary …

Raíces Y Recuerdos: Plantas Ornamentales Para Entornos Saludables, Adriana Hernández Bustos, María Janeth Camargo Garzón, María Victoria Rojas Martínez, Segundo Leonardo Cortes López

Ciencias de la Salud

El reino vegetal es un universo lleno de vida, colores, texturas, aromas y beneficios que trascienden a través del tiempo. Es un aliado perfecto para el trabajo conjunto e intergeneracional; para este caso, las plantas no solo embellecen los paisajes y espacios, sino que tienen además el poder de mejorar nuestra calidad de vida, especialmente cuando se integran en actividades terapéuticas y sociales con personas mayores.

Life After Death: Investigating The Resistance And Recovery Of Fungal Communities To Foundation Tree Mortality, Jessie F. Marlenee

Biology ETDs

Tree mortality can have cascading effects on the composition and resilience of interacting fungal communities. Yet, little is known about the impact tree mortality, distinct from abiotic drivers (i.e., drought), has on these communities. This dissertation focuses on the resilience of fungal communities to experimental tree mortality in a piñon-juniper woodland. In chapter one, I found that piñon mortality reduced piñon fine root biomass and piñon mycorrhizal fungal diversity, whereas juniper mycorrhizal fungi were unaffected by juniper mortality. In chapter two, I revealed that piñon mortality altered the composition and spatial structure of mycorrhizal and saprotrophic fungi in the soil, …

Native Maintenance Booklet, Plaster Creek Stewards

Print Materials

Your new garden is an ecological haven for pollinators. By replacing grass with native plants, you will be providing food and a resilient habitat for bees, butterflies, birds, and so much more. Many of our native insects rely on these native plants to survive and reproduce, and many birds rely on these insects to reproduce and feed their young. By bringing these plants back into our yards, we are giving them a huge helping hand. This booklet provides details on maintaining Michigan native landscapes, including recommended maintenance schedules, identifying native plants versus weeds, and garden advocacy suggestions.

Evaluation Of The Global Durum Panel (Triticum Turgidum Ssp. Durum) For Wheat Streak Mosaic Virus Resistance, Winter Survival, And Seed Characteristics, Megan Engel

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The majority of durum wheat (Triticum turgidum spp. durum; AABB; 2n=4x=28) is predominantly grown in the northern Great Plains of the United States, and is used in the production of semolina, a coarse flour that makes pasta and couscous. Durum has been widely regarded for being more tolerant to abiotic stress, due to its ability to withstand drought and high temperatures. In this thesis, we conducted greenhouse, field, and lab studies, for the traits wheat streak mosaic virus (WSMV), winter survival, and single kernel characteristics of the Global Durum Panel version 2 (GDPv2 n = 976), a panel …

Genetic And Soil Influences On The Grapevine Rhizosphere Microbiome, Lauren M. Quackenbush

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

In vineyard cropping systems, the rhizosphere microbiome arises through recruitment and filtering of the bulk soil microbiome shaped over time by soil carbon and nitrogen, climate, pH and historical legacies of vineyard management. The recruitment and filtering steps occur under the genetic influences of rootstock and scion that together drive variability in rhizosphere microbiome diversity and composition.

This study compares rhizosphere microbiomes of four Pinot Noir blocks under two rootstocks (101-14 and 420A) and four scions (777, 828, Calera, Mt. Eden). Core microbiomes were consistent across all replicates. The most abundant bacterial phyla were Actinobacteriota, Proteobacteria, and Acidobacteriota …

Arkansas Cotton Variety Tests 2024, F. Bourland, J. Gann, B. Lovelady, B. Guest Jr., J. Mcalee, L. Martin, Z. Treadway, C. Henderson

Arkansas Agricultural Experiment Station Research Series

The primary goal of the Arkansas Cotton Variety Tests is to provide unbiased data regarding the agronomic performance of cotton varieties and advanced breeding lines in the major cotton-growing areas of Arkansas. This information helps seed companies establish marketing strategies and assists producers in choosing varieties to plant. These annual evaluations will then facilitate the inclusion of new, improved genetic material in Arkansas cotton production. Adaptation of varieties is determined by evaluating the lines at five University of Arkansas System Division of Agriculture research sites (Manila, Keiser, Judd Hill, Marianna, and Rohwer). The 2024 tests at Keiser were adversely affected …

Diversity And Distribution Of Macrofungi In The Mid-Hills Of Bagmati Province, Central Nepal, Hari Sharan Adhikari, Suman Shrestha, Manoj Gurung, Sushma Pandit, Sujan Balami

Makara Journal of Science

The current study was carried out at seven research sites in the mid-hills (900-2500m asl) across six districts in Bagmati province, central Nepal to analyze the variety and distribution of macrofungal communities. The survey was carried out in the wet seasons from August 2017 to September 2022, including frequent field visits to the selected forests. Vari-ous diversity indices were applied to ascertain the composition of the macrofungal communities in the study area. A total of 133 wild macrofungal species belonging to 80 genera, 50 families, and 19 orders were observed. The macro-fungal population in the Bagmati province was dominated by …

Corrigendum To “ Phylogenomics Of The Tribe Leonureae Reveals A New Genus: Paraleonurus (Lamiaceae, Lamioideae) , [Turkish Journal Of Botany 48 (Si-1) 2024 427-440] “, Mei-Lin Qian, Ya-Ping Chen, Tuncay Di̇rmenci̇, Yue Zhao, Guo-Xiong Hu, Fei Zhao, Ferhat Celep, Bo Li, Chunlei Xiang

Turkish Journal of Botany

This corrigendum is written to correct an error in our previous publication. The term “ Yi Mu Cao Shu (益母草属; Chinese name).” was incorrectly spelled as “Jia Yi Mu Cao Shu (假益母草属; Chinese name)” in the article. The correct term should be “Yi Mu Cao Shu (益母草属; Chinese name)”. The authors apologize for any inconvenience caused and state that the scientific conclusions are unaffected.

Link to the original article: https://doi.org/10.55730/1300-008X.2825

Noccaea Bulutii (Brassicaceae): A New Species From Northeast Anatolia, Bariş Özüdoğru, Hayri̇ Duman

Turkish Journal of Botany

Noccaea bulutii is described as a new species from Artvin, in NE Anatolia. It resembles N. phyrgia, N. aptera, N. kovatsii and N. ochroleuca, but easily distinguished from all these species by its dentate basal leaves and elongated sterile shoots. Phylogenetic analyses using the nuclear-encoded ribosomal internal transcribed spacer (ITS) region placed N. bulutii and closely related species in a large polytomic clade, but none of these species formed a subclade with N. bulutii, demonstrating that these species are clearly distinct from each other. The species is described with diagnostic characters, detailed photographs, and taxonomic comments provided. The morphological similarities …

Erratum To "A New Fossil Wood Species Of Ziziphus From The Middle Miocene Of Türkiye And Its Palaeoenvironmental Evaluation, [Turkish Journal Of Botany 48 (2) 2024 91-104] ", Ünal Akkemi̇k, Özlem Toprak

Turkish Journal of Botany

This erratum addresses an issue with the first author’s address in the original published version of this article. T he author regrets to note the omission of a word in the university name in the original address. To rectify this oversight and ensure the accuracy of the published work, the complete university name is provided below for your reference: Ünal AKKEMİK1,*Özlem TOPRAK2 1Department of Forest Botany, Faculty of Forestry, İstanbul University-Cerrahpaşa, İstanbul, Turkiye 2 Tokat Vocational School, Tokat Gaziosmanpaşa University , Tokat, Turkiye

Link to the original article: https://doi.org/10.55730/1300-008X.2798

Erratum To “Acetylcholine Treatments Enhance Growth, Photosynthesis Efficiency And Stress Resilience In Maize Seedlings Exposed To Arsenic, [Turkish Journal Of Botany 49 (1) 2025 13-24] “, Büşra Arikan Abdulveli̇

Turkish Journal of Botany

This erratum addresses an issue regarding the page headers of the article. We regret to note that an error occurred in the page headers of the originally published version of this article. Although Büşra ARIKAN ABDULVELİ was the sole author, the page headers were mistakenly typeset as “ARIKAN ABDULVELİ et al.”. To rectify this oversight and ensure the accuracy of the published work, the page headers have been corrected as follows: “ARIKAN ABDULVELİ

Link to the original Article: https://doi.org/10.55730/1300-008X.2838

Effects Of Humic Acid And Salt Stress On Growth, Physiological Parameters And Mineral Substance Uptake In Artemisia Dracunculus L. (Tarragon), Serhat Seven, Şener Akinci

Turkish Journal of Botany

In this study, the physiological changes in Artemisia dracunculus L. plants under salinity stress and the remediative roles of leonardite-derived liquid humic acid (HA) were investigated. Salt stress caused a significant decrease in measured growth parameters (plant height, fresh weight of leaves and stems, dry weight of leaves and stems, number of leaves and leaf area). HA had a positive effect on growth parameters at 75 mM NaCl concentration, except for leaf number, but its effect was limited at 150 mM NaCl concentration. The total amount of protein was found to be lower in the leaves of seedlings grown under …

Benzothiadiazole Maintains Redox Balance And Promotes Defense Against Sitobion Avenae (F.) In Wheat By Fine-Tuning The Antioxidant System, Secondary Metabolism, And Osmolyte Accumulation., Fayyaz Ahmed, Samina Tanwir, Jam Nazeer Ahmad, Aysha Kiran, Faiz Ahmad Joyia

Turkish Journal of Botany

Aphids are destructive cereal pests causing serious yield losses in the wheat crop. Since wheat is a staple food for more than 75% of the human population, therefore, proper management of insect pests is crucial to enhance its productivity and ensure food security. Aphid herbivory induces highly coordinated defense responses in plants at the cellular and molecular level. This innate plant defense system is activated by a signal transduction pathway mediated by plant hormones like Salicyclic acid (SA). In the present investigation an attempt was made to explore the impacts of Benzothiadiazole (BTH), an analogue of SA on wheat plants …