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Full-Text Articles in Botany

Estimating Economic Minimums Of Mowing, Fertilizing, And Irrigating Turfgrass, Douglas J. Soldat, James T. Brosnan, Ambika Chandra, Roch E. Gaussoin, Alec Kowalewski, Bernd Leinauer, Frank S. Rossi, John C. Stier, J. Bryan Unruh Jan 2020

Estimating Economic Minimums Of Mowing, Fertilizing, And Irrigating Turfgrass, Douglas J. Soldat, James T. Brosnan, Ambika Chandra, Roch E. Gaussoin, Alec Kowalewski, Bernd Leinauer, Frank S. Rossi, John C. Stier, J. Bryan Unruh

Department of Agronomy and Horticulture: Faculty Publications

The public health crisis and economic recession caused by the COVID-19 pandemic have forced turfgrass industry professionals to re-evaluate standard practices. Minimum costs required to fertilize, irrigate, and mow turfgrasses can be roughly estimated using climate data, turfgrass physiology information, and resource costs. Although the actual minimum costs vary situationally and regionally, mowing golf putting greens optimally requires about US$34 per acre per month, whereas other turfgrass areas cost less than US$11 per acre per growing month. Fertilizer applications to turfgrass cost US$22 or less per acre per growing month. Irrigation costs (water and electricity for pumping) vary widely, with …


Continuous Cropping Alters Multiple Biotic And Abiotic Indicators Of Soil Health, Pervaiz Ahmad, Javed Iqbal, Qingming Zhang, Dima Chen, Hui Wei, Muhammad Saleem Jan 2020

Continuous Cropping Alters Multiple Biotic And Abiotic Indicators Of Soil Health, Pervaiz Ahmad, Javed Iqbal, Qingming Zhang, Dima Chen, Hui Wei, Muhammad Saleem

Department of Agronomy and Horticulture: Faculty Publications

The continuous cropping (CC) of major agricultural, horticultural, and industrial crops is an established practice worldwide, though it has significant soil health-related concerns. However, a combined review of the effects of CC on soil health indicators, in particular omics ones, remains missing. The CC may negatively impact multiple biotic and abiotic indicators of soil health, fertility, and crop yield. It could potentially alter the soil biotic indicators, which include but are not limited to the composition, abundance, diversity, and functioning of soil micro- and macro-organisms, microbial networks, enzyme activities, and soil food web interactions. Moreover, it could also alter various …


Use Of Family Structure Information In Interaction With Environments For Leveraging Genomic Prediction Models, Reyna Persa, Hiroyoshi Iwata, Diego Jarquin Jan 2020

Use Of Family Structure Information In Interaction With Environments For Leveraging Genomic Prediction Models, Reyna Persa, Hiroyoshi Iwata, Diego Jarquin

Department of Agronomy and Horticulture: Faculty Publications

The characterization of genomes with great detail offered by the modern genotyping platforms have opened a venue for accurately predicting the genotype-by-environment interaction (GE) effects of untested genotypes in different environmental conditions. Already developed statistical models have shown the advantages of including the GE interaction component in the prediction context using molecular markers, pedigree, or both. In order to leverage the family information of highly structured populations when pedigree data is not available, we developed a model that uses the family membership instead. The proposed model extends the reaction norm model by including the interaction between families and environments (FE). …


Coal Char Affects Soil Ph To Reduce Ammonia Volatilization From Sandy Loam Soil, Dinesh Panday, Maysoon M. Mikha, Bijesh Maharjan Jan 2020

Coal Char Affects Soil Ph To Reduce Ammonia Volatilization From Sandy Loam Soil, Dinesh Panday, Maysoon M. Mikha, Bijesh Maharjan

Department of Agronomy and Horticulture: Faculty Publications

Ammonia (NH3) volatilization loss adversely affects N availability in soil-plant systems, reduces crop yield, and negatively impacts environment. Char (coal combus- tion residue), which contains up to 293 g kg−1 total C by weight, has been shown to reduce NH3 volatilization due to its considerably high surface area and cation exchange capacity. The NH3 loss can be greatly affected by a shift in soil pH or urea hydrolysis. A 21-d laboratory study was conducted to evaluate the effects of char on soil pH, N transformations, and subsequent NH3 volatilization in sandy loam soil. Two char rates (0 and 13.4 Mg …


Isoseq Transcriptome Assembly Of C3 Panicoid Grasses Provides Tools To Study Evolutionary Change In The Panicoideae, Daniel S. Carvalho, Aime Nishimwe, James Schnable Jan 2020

Isoseq Transcriptome Assembly Of C3 Panicoid Grasses Provides Tools To Study Evolutionary Change In The Panicoideae, Daniel S. Carvalho, Aime Nishimwe, James Schnable

Department of Agronomy and Horticulture: Faculty Publications

The number of plant species with genomic and transcriptomic data has been increasing rapidly. The grasses—Poaceae—have been well represented among species with published reference genomes. However, as a result the genomes of wild grasses are less frequently targeted by sequencing efforts. Sequence data from wild relatives of crop species in the grasses can aid the study of domestication, gene discovery for breeding and crop improvement, and improve our understanding of the evolution of C4 photosynthesis. Here, we used long-read sequencing technology to characterize the transcriptomes of three C3 panicoid grass species: Dichanthelium oligosanthes, Chasmanthium laxum, and …


The Lateral Root Density Gene Regulates Root Growth During Water Stress In Wheat, Dante F. Placido, Jaspreet Sandhu, Shirley Sato, Natalya Nersesian, Truyen Quach, Thomas Clemente, Paul Staswick, Harkamal Walia Jan 2020

The Lateral Root Density Gene Regulates Root Growth During Water Stress In Wheat, Dante F. Placido, Jaspreet Sandhu, Shirley Sato, Natalya Nersesian, Truyen Quach, Thomas Clemente, Paul Staswick, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

Drought stress is the major limiting factor in agriculture. Wheat, which is the most widely grown crop in the world, is predominantly cultivated in drought-prone rainfed environments. Since roots play a critical role in water uptake, root response to water limitations is an important component for enhancing wheat adaptation. In an effort to discover novel genetic sources for improving wheat adaptation, we characterized a wheat translocation line with a chromosomal segment from Agropyron elongatum, a wild relative of wheat, which unlike common wheat maintains root growth under limited-water conditions. By exploring the root transcriptome data, we found that reduced …


Adjusting Corn Nitrogen Management By Including A Mineralizable-Nitrogen Test With The Preplant And Presidedress Nitrate Tests, Jason Clark, Fabián G. Fernández, Kristen S. Veum, James J. Camberato, Paul R. Carter, Richard Ferguson, David W. Franzen, Daniel E. Kaiser, Newell R. Kitchen, C. A.M. Laboski, Emerson Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan Jan 2020

Adjusting Corn Nitrogen Management By Including A Mineralizable-Nitrogen Test With The Preplant And Presidedress Nitrate Tests, Jason Clark, Fabián G. Fernández, Kristen S. Veum, James J. Camberato, Paul R. Carter, Richard Ferguson, David W. Franzen, Daniel E. Kaiser, Newell R. Kitchen, C. A.M. Laboski, Emerson Nafziger, Carl J. Rosen, John E. Sawyer, John F. Shanahan

Department of Agronomy and Horticulture: Faculty Publications

The anaerobic potentially mineralizable N (PMN) test combined with the preplant (PPNT) and presidedress (PSNT) nitrate tests may improve corn (Zea mays L.) N fertilization predictions. Forty-nine corn N response experiments (mostly corn following soybean [Glycine max (L.) Merr.]) were conducted in the U.S. Midwest from 2014–2016 to evaluate the ability of the PPNT and PSNT to predict corn relative yield (RY) and N fertilizer over- and under-application rates when adjusted by PMN. Before planting and N fertilization, PPNT (0–30, 30–60, and 60–90 cm) and PMN (0–30 cm) samples were obtained. In-season soil samples were obtained at the …


Relating Four-Day Soil Respiration To Corn Nitrogen Fertilizer Needs Across 49 U.S. Midwest Fields, G. M. Bean, Newell R. Kitchen, Kristen S. Veum, James J. Camberato, Richard Ferguson, Fabian G. Fernandez, David W. Franzen, Carrie A.M. Laboski, Emerson Nafziger, John E. Sawyer, Matt Yost Jan 2020

Relating Four-Day Soil Respiration To Corn Nitrogen Fertilizer Needs Across 49 U.S. Midwest Fields, G. M. Bean, Newell R. Kitchen, Kristen S. Veum, James J. Camberato, Richard Ferguson, Fabian G. Fernandez, David W. Franzen, Carrie A.M. Laboski, Emerson Nafziger, John E. Sawyer, Matt Yost

Department of Agronomy and Horticulture: Faculty Publications

Soil microbes drive biological functions thatmediate chemical and physical processes necessary for plants to sustain growth. Laboratory soil respiration has been proposed as one universal soil health indicator representing these functions, potentially informing crop and soil management decisions. Research is needed to test the premise that soil respiration is helpful for profitable in-season nitrogen (N) rate management decisions in corn (Zea mays L.). The objective of this research was two-fold: (i) determine if the amount of N applied at the time of planting effected soil respiration, and (ii) evaluate the relationship of soil respiration to corn yield response to …


Adding A Late Fall Application Of Proxy (Ethephon) Before Two Traditional Spring Applications Improves Seedhead Control Of Annual Bluegrass, Zachary Reicher, Matthew Sousek, Aaron J. Patton, Adam Van Dyke, William C. Kreuser, John C. Inguagiato, Kevin M. Miele, John Brewer, Shawn D. Askew, Aaron Hathaway, Thomas A. Nikolai, Alec Kowalewski, Brian Mcdonald Jan 2020

Adding A Late Fall Application Of Proxy (Ethephon) Before Two Traditional Spring Applications Improves Seedhead Control Of Annual Bluegrass, Zachary Reicher, Matthew Sousek, Aaron J. Patton, Adam Van Dyke, William C. Kreuser, John C. Inguagiato, Kevin M. Miele, John Brewer, Shawn D. Askew, Aaron Hathaway, Thomas A. Nikolai, Alec Kowalewski, Brian Mcdonald

Department of Agronomy and Horticulture: Faculty Publications

Annual bluegrass (ABG) (Poa annua L.) is a prolific seed producer in the spring on golf courses that in turn decreases aesthetic quality and trueness of ball roll on coolseason putting greens. Proxy (ethephon) applied twice in the spring after green-up is the current industry standard after the loss of Embark (mefluidide) from the turf and ornamental market. However, plant growth regulators including Proxy have been used for years to help suppressABGseedheads with inconsistent success. The primary objective of this study was to determine if ABG seedhead suppression is improved by adding a late fall application of Proxy to …


Allelic Variation In Rice Fertilization Independent Endosperm 1 Contributes To Grain Width Under High Night Temperature Stress, Balpreet K. Dhatt, Puneet Paul, Jaspreet Sandhu, Waseem Hussain, Larissa Irvin, Feiyu Zhu, Maria Arlene Adviento-Borbe, Argelia Lorence, Paul Staswick, Hongfeng Yu, Gota Morota, Harkamal Walia Jan 2020

Allelic Variation In Rice Fertilization Independent Endosperm 1 Contributes To Grain Width Under High Night Temperature Stress, Balpreet K. Dhatt, Puneet Paul, Jaspreet Sandhu, Waseem Hussain, Larissa Irvin, Feiyu Zhu, Maria Arlene Adviento-Borbe, Argelia Lorence, Paul Staswick, Hongfeng Yu, Gota Morota, Harkamal Walia

Department of Agronomy and Horticulture: Faculty Publications

A higher minimum (night-time) temperature is considered a greater limiting factor for reduced rice yield than a similar increase in maximum (daytime) temperature. While the physiological impact of high night temperature (HNT) has been studied, the genetic and molecular basis of HNT stress response remains unexplored.

We examined the phenotypic variation for mature grain size (length and width) in a diverse set of rice accessions under HNT stress. Genome-wide association analysis identified several HNT-specific loci regulating grain size as well as loci that are common for optimal and HNT stress conditions.

A novel locus contributing to grain width under HNT …


Leveraging Genome-Enabled Growth Models To Study Shoot Growth Responses To Water Deficit In Rice, Malachy T. Campbell, Alexandre Grondin, Harkamal Walia, Gota Morota Jan 2020

Leveraging Genome-Enabled Growth Models To Study Shoot Growth Responses To Water Deficit In Rice, Malachy T. Campbell, Alexandre Grondin, Harkamal Walia, Gota Morota

Department of Agronomy and Horticulture: Faculty Publications

lucidating genotype-by-environment interactions and partitioning its contribution to phenotypic variation remains a challenge for plant scientists. We propose a framework that utilizes genome-wide markers to model genotype-specific shoot growth trajectories as a function of time and soil water availability. A rice diversity panel was phenotyped daily for 21 d using an automated, high-throughput image-based, phenotyping platform that enabled estimation of daily shoot biomass and soil water content. Using these data, we modeled shoot growth as a function of time and soil water content, and were able to determine the time point where an inflection in the growth trajectory occurred. We …


Voxel Carving-Based 3d Reconstruction Of Sorghum Identifies Genetic Determinants Of Light Interception Efficiency, Mathieu Gaillard, Chenyong Miao, James Schnable, Bedrich Benes Jan 2020

Voxel Carving-Based 3d Reconstruction Of Sorghum Identifies Genetic Determinants Of Light Interception Efficiency, Mathieu Gaillard, Chenyong Miao, James Schnable, Bedrich Benes

Department of Agronomy and Horticulture: Faculty Publications

Changes in canopy architecture traits have been shown to contribute to yield increases. Optimizing both light interception and light interception efficiency of agricultural crop canopies will be essential to meeting the growing food needs. Canopy architecture is inherently three-dimensional (3D), but many approaches to measuring canopy architecture component traits treat the canopy as a two-dimensional (2D) structure to make large scale measurement, selective breeding, and gene identification logistically feasible. We develop a high throughput voxel carving strategy to reconstruct 3D representations of sorghum from a small number of RGB photos. Our approach builds on the voxel carving algorithm to allow …


Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang Jan 2020

Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang

Department of Agronomy and Horticulture: Faculty Publications

Heterosis, or hybrid vigour, is a predominant phenomenon in plant genetics, serving as the basis of crop hybrid breeding, but the causative loci and genes underlying heterosis remain unclear in many crops. Here, we present a large-scale genetic analysis using 5360 offsprings from three elite maize hybrids, which identifies 628 loci underlying 19 yield-related traits with relatively high mapping resolutions. Heterotic pattern investigations of the 628 loci show that numerous loci, mostly with complete–incomplete dominance (the major one) or overdominance effects (the secondary one) for heterozygous genotypes and nearly equal proportion of advantageous alleles from both parental lines, are the …


Improving The Biological Control Of Persicaria Perfoliata (Polygonaceae) Using Rhinoncomimus Latipes Korotyaev (Coleoptera: Curculionidae), Jaewon Kim Jan 2020

Improving The Biological Control Of Persicaria Perfoliata (Polygonaceae) Using Rhinoncomimus Latipes Korotyaev (Coleoptera: Curculionidae), Jaewon Kim

Graduate Theses, Dissertations, and Problem Reports (ETD)

Persicaria perfoliata (L.) H. Gross (Polygonaceae; Mile-a-minute weed) is a rapid-growing invasive vine introduced from eastern Asia to northeastern United States in the 1930s. This vine has been invaded in disturbed areas and reforestation sites in 15 states in the U.S. and forms dense, monocultural patches that may inhibit natural forest regeneration. To control this weed, a host-specific biocontrol agent, Rhinoncomimus latipes Korotyaev (Coleoptera: Curculionidae) has been released in the P. perfoliata invaded states in the U.S. during the past 15 years. Currently, R. latipes is released by hand to the invaded area where the presence of the weed is …


Evolutionary Genomics Of Dynamic Sex Chromosomes In The Salicaceae, Ran Zhou Jan 2020

Evolutionary Genomics Of Dynamic Sex Chromosomes In The Salicaceae, Ran Zhou

Graduate Theses, Dissertations, and Problem Reports (ETD)

Identifying the sex-determination region (SDR) and other genomic features of sex chromosomes are of great importance in the studies of the evolution of sex. However, the process of accurately identifying the size and location of the SDR is often difficult, even when a genomic sequence is available. This usually is hindered by large repetitive elements and a lack of recombination in the SDR. In this thesis, I assemble sex chromosomes with whole genomic sequencing data, identify SDRs and explore their genomic features in two sister species from the Salicaceae family. I also develop an interpretation of the lability of the …


The Endogenous L-Cysteine Desulfhydrase And Hydrogen Sulfide Participate In Supplemented Phosphorus-Induced Tolerance To Salinity Stress In Maize (Zea Mays) Plants, Cengi̇z Kaya, Muhammad Ashraf Jan 2020

The Endogenous L-Cysteine Desulfhydrase And Hydrogen Sulfide Participate In Supplemented Phosphorus-Induced Tolerance To Salinity Stress In Maize (Zea Mays) Plants, Cengi̇z Kaya, Muhammad Ashraf

Turkish Journal of Botany

Although phosphorus supplementation (SP) has been shown to improve salinity tolerance in plants, crosstalk between hydrogen sulfide (H2S) or L-cysteine desulfhydrase (LDES) and SP-induced salinity tolerance needs to be elucidated. Thus, prior to initiation of stress treatment, young seedlings were transferred to aqueous solution containing the scavenger of H2S, 0.1 mM hypotaurine (HT), or the inhibitor of LDES, 0.3 mM DL-propargylglycine (PAG), for 12 h. The plants grown under control (no NaCl added) or salinity stress (SS; 100 mM NaCl) were then supplemented with SP (2.0 mM in total) as KH2PO4 for 5 weeks. SS caused a significant decrease in …


Russula Shanglaensis Sp. Nov. (Basidiomycota: Russulales), A New Species From The Mixed Coniferous Forests In District Shangla, Pakistan, Sadiq Ullah, Andrew William Wilson, Muhammad Fiaz, Shah Hussain, Gregory M. Mueller, Abdul Nasir Khalid Jan 2020

Russula Shanglaensis Sp. Nov. (Basidiomycota: Russulales), A New Species From The Mixed Coniferous Forests In District Shangla, Pakistan, Sadiq Ullah, Andrew William Wilson, Muhammad Fiaz, Shah Hussain, Gregory M. Mueller, Abdul Nasir Khalid

Turkish Journal of Botany

A new species in the genus Russula from the mixed coniferous forest of District Shangla, Khyber Pakhtunkhwa, Pakistan is described and illustrated. Phylogenetic data derived from DNA sequences of nuclear ribosomal internal transcribed spacer (ITS), along with morphological characterizations, indicate the species is novel.Russula shanglaensis sp. nov. is distinct from other known species in subsect. Virescentinae. It is characterized by the convex to slightly depressed grayish pilei that often reflect rusty brown to light purplish spots, with very lightly striated to tuberculate striated margins. The occurrence of subglobose to ellipsoidal basidiospores (6.5-8 × 6-7 µm) with irregular incomplete reticulation is …


Notes On The Genus Sauvetrea (Orchidaceae, Maxillariinae), With A Description Of A New Species, Dariusz L. Szlachetko, Natalia Oledrzynska, Monika M. Lipinska Jan 2020

Notes On The Genus Sauvetrea (Orchidaceae, Maxillariinae), With A Description Of A New Species, Dariusz L. Szlachetko, Natalia Oledrzynska, Monika M. Lipinska

Turkish Journal of Botany

The genus Sauvetrea Szlach. (Orchidaceae) was segregated from Maxillaria sensu lato in 2007. It embraces a group of from 10 to nearly 20 species, all initially defined as Maxillaria sect. Trigonae. Sauvetrea can be easily distinguished from closely related Rhetinantha M.A.Blanco by the lip callus. During the revision of the materials stored in AMES we came across specimens collected by Vargas in Peru, which were initially identified by Schweinfurth as Maxillaria brachypetala Schltr. We compared Vargas's discovery with the protologue of the latter species and other Sauvetrea, but it does not fit the description of any genus representatives known so …


Transcriptomic Insights Into The Molecular Aspects Of Salt Stress Responses In Kandelia Candel Roots, Jianhong Xing, Dezhuo Pan, Lingxia Wang, Fanglin Tan, Wei Chen Jan 2020

Transcriptomic Insights Into The Molecular Aspects Of Salt Stress Responses In Kandelia Candel Roots, Jianhong Xing, Dezhuo Pan, Lingxia Wang, Fanglin Tan, Wei Chen

Turkish Journal of Botany

The mangrove plant Kandelia candel is a type of woody halophyte that grows in tropical and subtropical ocean intertidal zones and exhibits a high salt tolerance. In this study, 61,970 unigenes were obtained from the roots of 60-day-old K. candel seedlings treated with 0 (control), 200, 400, and 600 mM NaCl for 3 days with an N50 of 1510 bp. Moreover, 454, 311, and 2663 genes were differentially expressed under 200, 400, and 600 mM NaCl treatments, respectively. These differentially expressed genes were primarily involved in plant hormone signal transduction, carbohydrate and energy metabolism, amino acid metabolism, stress response, and …


Effects Of Microalgal Biomass As Biofertilizer On The Growth Of Cucumber And Microbial Communities In The Cucumber Rhizosphere, Junping Lv, Shufang Liu, Jia Feng, Qi Liu, Jun Guo, Lige Wang, Xiaoyan Jiao, Shulian Xie Jan 2020

Effects Of Microalgal Biomass As Biofertilizer On The Growth Of Cucumber And Microbial Communities In The Cucumber Rhizosphere, Junping Lv, Shufang Liu, Jia Feng, Qi Liu, Jun Guo, Lige Wang, Xiaoyan Jiao, Shulian Xie

Turkish Journal of Botany

In the present study, microalgal biomass (Anabeana circinalis and Scenedesmus quadricauda) was used as biofertilizer in cucumber cultivation. The response of cucumber growth characters to microalgal biofertilizer was evaluated. Moreover, rhizosphere microbial diversity and community composition of cucumber was analyzed through 16S rRNA high-throughput Illumina sequencing data. The results showed that microalgal biomass as biofertilizer significantly promoted height, number of leaves and flower buds, and stem diameter of cucumber. The application of a high concentration of S. quadricauda to soil raised the diversity of rhizosphere fungi of cucumber. The rhizosphere microbial community of cucumber also responded to microalgal biofertilizer. The …


The Role Of Badh Gene In Oxidative, Salt, And Drought Stress Tolerances Of White Clover, Gürkan Demi̇rkol Jan 2020

The Role Of Badh Gene In Oxidative, Salt, And Drought Stress Tolerances Of White Clover, Gürkan Demi̇rkol

Turkish Journal of Botany

The aim of this study was to confirm the presence of BADH gene and control whether it plays an important role to protect white clover (Trifolium repens L.) against oxidative, salt, and drought stresses. Three genotypes possessing BADH and 1 genotype lacking BADH were selected, considering the expression levels of BADH in response to methyl viologen mediated oxidative stress. The genotypes possessing BADH displayed significantly less ion leakage under oxidative stress treatment, compared to that lacking BADH . In order to test salinity tolerance, the plants were treated with 300 mM NaCl for 2 weeks, and to mimic drought conditions, …


Effects Of Environmental Heterogeneity And Temporal Variation On Ecological Relationships Of Vegetation In A Seasonally Dry Tropical Forest In Brazil, Alisson Borges Miranda Santos, Nathalle Cristine Alencar Fagundes, Cleber Rodrigo Souza, Vinicius Andrade Maia, Wilder Bento Da Silva, Gabriela Gomes Pires De Paula, Felipe De Carvalho Araujo, Polyanne Coelho, Natália Aguiar-Campos, Diego Teixeira Girardelli, Jean Daniel Morel, Rubens Manoel Dos Santos Jan 2020

Effects Of Environmental Heterogeneity And Temporal Variation On Ecological Relationships Of Vegetation In A Seasonally Dry Tropical Forest In Brazil, Alisson Borges Miranda Santos, Nathalle Cristine Alencar Fagundes, Cleber Rodrigo Souza, Vinicius Andrade Maia, Wilder Bento Da Silva, Gabriela Gomes Pires De Paula, Felipe De Carvalho Araujo, Polyanne Coelho, Natália Aguiar-Campos, Diego Teixeira Girardelli, Jean Daniel Morel, Rubens Manoel Dos Santos

Turkish Journal of Botany

Species distribution patterns, community structure, and dynamics are determined on a small scale by soil and habitat heterogeneity. The aim of this work is to evaluate the temporal changes in composition and structure of a tree community, revealing the ecological drivers of the observed vegetation patterns. For 16 years (2000, 2005, 2010, and 2016) we monitored the temporal variations in structure and floristic composition of a semideciduous seasonal forest through 20 × 20 m2 (400 m2) plots, totaling 2.08 ha of sampled area encompassing Cambisol (0.4 ha), Oxysol (1.12 ha), and Nitosol (0.56 ha) soil classes. These tree communities were …


Tragopogon Abbreviatus (Asteraceae): A Little-Known Species Inferred From Morphological And Molecular Analysis, Kami̇l Çoşkunçelebi̇, Mutlu Gültepe, Murat Erdem Güzel, Serdar Makbul Jan 2020

Tragopogon Abbreviatus (Asteraceae): A Little-Known Species Inferred From Morphological And Molecular Analysis, Kami̇l Çoşkunçelebi̇, Mutlu Gültepe, Murat Erdem Güzel, Serdar Makbul

Turkish Journal of Botany

Tragopogon porrifolius occurs in Turkey with 3 taxonomically confused subspecies: T. porrifolius subsp. eriospermus, T. porrifolius subsp. longirostris, and T. porrifolius subsp. abbreviatus. In the present paper, T. porrifolius subsp. abbreviatus endemic to Turkey is raised at specific level based on morphological and molecular analysis. After detailed assessment of original herbarium specimens and literature studies, we found that this name is not typified yet. Thus, a lectotype is provided together with an emended diagnosis; synonym, distribution map, and conservation status for the first time. Additionally, a preliminary phylogenetic position of this little-known taxon is given on several newly sequenced data.


Comparative Anatomical Studies In Relation To Taxonomy Of Sedum S.L. (Crassulaceae) In Iran, Maryam Mohammadi Shahrestani, Marzieh Beygom Faghir, Mostafa Assadi Jan 2020

Comparative Anatomical Studies In Relation To Taxonomy Of Sedum S.L. (Crassulaceae) In Iran, Maryam Mohammadi Shahrestani, Marzieh Beygom Faghir, Mostafa Assadi

Turkish Journal of Botany

This study aimed to characterize the stem, peduncle, and leaf anatomy of 22 species of Sedum senso lato distributed in Iran. The results showed that the presence of tanniniferous storage cells in stems and leaves, distinct xylem vessels in stems, and the shape of peduncle cross sections, were taxonomically informative evidence, and isolated Phedimus from the other studied taxa of Sedum s.l. , whereas hairy leaves and peduncles containing starch storage cells were identified as Prometheum and Hylotelephium respectively. In addition, the current anatomical evidence confirmed the alliance of 2 sections of Sedum and Epeteium within Sedum sensu stricto. The …


Structural Characterization Of Its2 And Cbc Species Concept Applications In The Tribe Coluteocarpeae (Brassicaceae), Kurtuluş Özgi̇şi̇ Jan 2020

Structural Characterization Of Its2 And Cbc Species Concept Applications In The Tribe Coluteocarpeae (Brassicaceae), Kurtuluş Özgi̇şi̇

Turkish Journal of Botany

The taxonomic utility of internal transcribed spacer 2 (ITS2) secondary structures in different plant groups, as well as in Brassicaceae, has been addressed by many studies. Although characterization and applications of ITS2 secondary structures for the members of main Brassicaceae lineages (Lineages I, II, III, and expanded Lineage II) have been studied, the utility of compensatory base change (CBC) species concept has not been the subject of any studies thus far. In the current study, the ITS2 secondary structures of 49 Coluteocarpeae (expanded Lineage II) specimens were investigated to determine relationships among the species. In addition to the utility of …


An Ethnobotanical Survey Of Medicinal Plants In Ballakayati (Erbil, North Iraq), Awara Mohammed A.M.A. Kawarty, Lütfi̇ Behçet, Uğur Çakilcioğlu Jan 2020

An Ethnobotanical Survey Of Medicinal Plants In Ballakayati (Erbil, North Iraq), Awara Mohammed A.M.A. Kawarty, Lütfi̇ Behçet, Uğur Çakilcioğlu

Turkish Journal of Botany

This study aims to identify wild plants used for medical purposes by local people of the Ballakayati district of Erbil in North Iraq, and to determine the local names and uses of those plants. The study was carried out for approximately 3 years between 2016 and 2018. During this period of time, 85 plant specimens were collected. Demographic characteristics of the participants, names of the local plants, used parts of these plants and their preparation methods were investigated and recorded. In the literature analysis of the plants used in this study, 85 plants were found to be used for medicinal …


Enhanced Stress Tolerance In Transformed Ajuga Bracteosa Wall. Ex Benth. Regenerants By Upregulated Gene Expression Of Metabolic Pathways, Samina Rubnawaz, Waqas Kayani, Rashid Mahmood, Bushra Mirza Jan 2020

Enhanced Stress Tolerance In Transformed Ajuga Bracteosa Wall. Ex Benth. Regenerants By Upregulated Gene Expression Of Metabolic Pathways, Samina Rubnawaz, Waqas Kayani, Rashid Mahmood, Bushra Mirza

Turkish Journal of Botany

The rol oncogenes of Agrobacterium rhizogenes enhance the production of medicinally important compounds in plants and provide a first barrier against the overproduction of reactive oxygen species during biotic and abiotic stress. This study was designed to evaluate the expression of genes involved in biosynthetic pathways and their impact on metabolic contents and environmental stress tolerance in regenerated Ajuga bracteosa Wall. ex Benth. After successful transformation, real-time quantitative PCR confirmed the increased expression (1.94-6.59-fold) of HMGR, HDS, FDS, PAL, and TTG1 genes in transgenic lines. Furthermore, GC-MS coupled with principal component analysis revealed diverse concentrations of 97 metabolites in A. …


Will Ferulago Glareosa Kandemir And Hedge (Apiaceae) Be Extinct In The Near Future?, İdri̇s Sari, Ali̇ Kandemi̇r Jan 2020

Will Ferulago Glareosa Kandemir And Hedge (Apiaceae) Be Extinct In The Near Future?, İdri̇s Sari, Ali̇ Kandemi̇r

Turkish Journal of Botany

Turkey is one of the most important temperate countries on Earth in terms of plant diversity. There is a growing interest in understanding habitat suitability and future distributions of species in the scientific world. Because climate change has impacted ecosystems with major consequences, species are shifting and declining much faster than in the past. Some global climate models used for predicting climate in the future better represent and have higher reliability for some climate types.Ferulago glareosa , which lives in Turkey, is a rare endemic plant species. In this study, we investigated current and future distributions of the species determined …


Contribution To The Flora Of Asian And European Countries: New National And Regional Vascular Plant Records, 9, Marcin Nobis, Jolanta Marciniuk, Pawel Marciniuk, Mateusz Wolanin, Gergely Király, Arkadiusz Nowak, Beata Paszko, Ewelina Klichowska, Gonzalo Moreno-Moral, Renata Piwowarczyk, Óscar Sánchez-Pedraja, Anna Wróbel, Irina N. Egorova, Pavol Elia? Jun., Denis A. Krivenko Jan 2020

Contribution To The Flora Of Asian And European Countries: New National And Regional Vascular Plant Records, 9, Marcin Nobis, Jolanta Marciniuk, Pawel Marciniuk, Mateusz Wolanin, Gergely Király, Arkadiusz Nowak, Beata Paszko, Ewelina Klichowska, Gonzalo Moreno-Moral, Renata Piwowarczyk, Óscar Sánchez-Pedraja, Anna Wróbel, Irina N. Egorova, Pavol Elia? Jun., Denis A. Krivenko

Turkish Journal of Botany

The paper presents new records for 39 vascular plant species from eight Eurasian countries. Aniselytron treutleri (Poaceae), Hackelochloa granularis (Poaceae), Melica kozlovii (Poaceae) and Melica nutans (Poaceae) are reported from China; Dichondra micrantha (Convolvulaceae) from Hungary; Orobanche serbica (Orobanchaceae) and Viscum album subsp. austriacum (Santalaceae) from Italy; Petrorhagia prolifera (Caryophyllaceae), Puccinellia schischkinii and Stipa pulcherrima (Poaceae) from Kyrgyzstan; Megadenia speluncarum (Brassicaceae), Phelipanche lavandulacea (Orobanchaceae), Solanum physalifolium (Solanaceae), Thymus lenensis (Lamiaceae) from Russia; Rubus phoenicolasius (Rosaceae) from Slovakia; Atraphaxis karataviensis (Polygonaceae) from Tajikistan; as well as Rubus austroslovacus and R. crispomarginatus (Rosaceae) in addition to Taraxacum acervatulum, T. aequilobum, T. amplum, …


Genome Size Confirms The Presence Of Artemisia Verlotiorum (Asteraceae) In Lebanon, Filip Verloove, Attila Mesterházy, Marc El Beyrouthy, Ben Zonneveld Jan 2020

Genome Size Confirms The Presence Of Artemisia Verlotiorum (Asteraceae) In Lebanon, Filip Verloove, Attila Mesterházy, Marc El Beyrouthy, Ben Zonneveld

Turkish Journal of Botany

The Far Eastern weed Artemisia verlotiorum was formerly reported from Lebanon. However, for a number of reasons this record was questionable. In 2019, the genuine presence of this species was confirmed based on macromorphology and strengthened by assessing the somatic nuclear DNA content (genome size or 2C-value) of the Lebanese populations.