Agronomy and Crop Sciences Commons^™

Fine Mapping And Cloning Of The Major Seed Protein Quantitative Trait Loci On Soybean Chromosome 20, Christina E. Fliege, Russell A. Ward, Pamela Vogel, Hanh Nguyen, Truyen Quach, Ming Guo, João Paulo Gomes Viana, Lucas Borges Dos Santos, James Specht, Thomas Clemente, Matthew E. Hudson, Brian W. Diers

Department of Agronomy and Horticulture: Faculty Publications

Soybean [Glycine max (L.) Merr.] is a unique crop species because it has high levels of both protein and oil in its seed. Of the many quantitative trait loci (QTL) controlling soybean seed protein content, alleles of the cqSeed protein-003 QTL on chromosome 20 exert the greatest additive effect. The high-protein allele exists in both cultivated and wild soybean (Glycine soja Siebold & Zucc.) germplasm. Our objective was to fine map this QTL to enable positional-based cloning of its underlying causative gene(s). Fine mapping was achieved by developing and testing a series of populations in which the chromosomal region surrounding …

Soybean Gall Midge (Resseliella Maxima Gagné): Insecticide Efficacy And Seasonal Larval Abundance, Vilma Maria Montenegro Castro

Department of Entomology: Dissertations, Theses, and Student Research

Soybean gall midge, Resseliella maxima Gagné was recently identified as a new species injuring soybean in Nebraska, Iowa, South Dakota, Minnesota, and Missouri. Resseliella maxima injury is caused by its three instars that feed on tissues within the soybean stem. Infested plants exhibit a darkening of the stem, disrupting nutrient flow within the plant and can lead to wilting or death of plants. Total yield losses can occur in the first 30 m of the field in heavily infested sites. The biology and behavior of this newly described insects is not well understood and management strategies for the management of …

Arkansas Rice: Herbicide Resistance Concerns, Production Practices, And Weed Management Costs, Thomas R. Butts, K. Badou-Jeremie Kouame, Jason K. Norsworthy, L. Tom Barber

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

An online survey to better understand current weed management practices and concerns in Arkansas rice was distributed in the fall of 2020. A total of 123 respondents from across the Arkansas rice growing region returned the survey covering a total of 236,414 rice hectares, representing about 40% of the planted Arkansas rice hectares in 2020. The most problematic weeds were Echinochloa crus-galli (L.) P. Beauv. (ECG), Cyperus spp., and Oryza sativa L. (weedy rice), respectively, in flooded rice, and ECG, Amaranthus palmeri S. Wats., and Cyperus spp., respectively, in furrow-irrigated rice. Most respondents (78%) reported high concern with herbicide-resistant weeds, …

Water Quality Adjacent To Swine Slurry Holding Ponds Associated With A Concentrated Animal Feeding Operation, Andrew Sharpley, James Burke, Kristofor Brye, Larry Berry, Phillip Hays, Mike Daniels, Karl Vandevender, Tim Glover, Brian Haggard

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

Environmental concerns exist over extended storage of liquid animal waste in outdoor holding ponds before land application, particularly in regions with underlying karst geology. To determine the effects of holding ponds on water quality, belowground interceptor trenches, groundwater (well), and a downslope ephemeral stream were monitored for water quality parameters. Nitrate-nitrogen concentrations increased (p < .0001) in well and ephemeral stream samples but decreased in trench samples (Trench 1 with a p < .0001) near the swine production facility and holding ponds over a 5-yr monitoring period (April 2014–June 2019). In contrast, chloride, which is a conservative element that can move freely through the soil without chemical, physical, or biological modification, and electrical conductivity decreased (p < .0001 to .0203) over the monitoring period in well and Trench 1 samples. Flow in the interceptor trenches was highly responsive to rainfall, suggesting the trenches were mainly capturing shallow subsurface flows initiated by rainfall. A lack of any increasing trend in chloride and electrical conductivity for ephemeral stream, well, or trench samples suggests that elevated nitrate-nitrogen concentrations in well and ephemeral stream samples may have been influenced by sources other than the liquid manure holding ponds (i.e., sources that have low chloride and electrical conductivity values). In regions with underlying karst geology, surface and subsurface water resources may require more expansive monitoring to demonstrate liquid manure holding ponds effects on nearby water quality.

Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman

Department of Agronomy and Horticulture: Faculty Publications

Microbial symbionts play a significant role in plant health and stress tolerance. However, few studies exist that address rare species of core-microbiome function during abiotic stress. In the current study, we compared the microbiome composition of succulent dwarf shrub halophyte Zygophyllum qatarensis Hadidi across desert populations. The results showed that rhizospheric and endosphere microbiome greatly varied due to soil texture (sandy and gravel). No specific bacterial amplicon sequence variants were observed in the core-microbiome of bulk soil and rhizosphere, however, bacterial genus Alcaligenes and fungal genus Acidea were abundantly distributed across root and shoot endospheres. We also analyzed major nutrients …

Microbiome Variation Across Populations Of Desert Halophyte Zygophyllum Qatarensis, Abdul Latif Khan, Lucas Dantas Lopes, Saqib Bilal, Sajjad Asaf, Kerri M. Crawford, Venkatesh Balan, Ahmed Al-Rawahi, Ahmed Al-Harrasi, Daniel P. Schachtman

Department of Agronomy and Horticulture: Faculty Publications

Microbial symbionts play a significant role in plant health and stress tolerance. However, few studies exist that address rare species of core-microbiome function during abiotic stress. In the current study, we compared the microbiome composition of succulent dwarf shrub halophyte Zygophyllum qatarensis Hadidi across desert populations. The results showed that rhizospheric and endosphere microbiome greatly varied due to soil texture (sandy and gravel). No specific bacterial amplicon sequence variants were observed in the core-microbiome of bulk soil and rhizosphere, however, bacterial genus Alcaligenes and fungal genus Acidea were abundantly distributed across root and shoot endospheres. We also analyzed major nutrients …

Microgreens Grow Kit: A Novel Pilot Study To Improve Nutrition Awareness, Ben Haslund-Gourley, Chris Para, Swaksha Rachuri, Sascha Enders, Rayna Marshall, Vibhuti Mishra, Simone Udeh, Jessica Nwabeke, Annette Gadegbeku

Transformative Medicine

Obesity and associated non-communicable illnesses including coronary heart disease, type 2 diabetes, and stroke have steadily increased in prevalence over the last decade. Previous studies identified the involvement of individual, family, and community support intervention strategies used to prevent and manage obesity. Additionally, education on nutrition from the early stages of development is crucial for obesity prevention and control. Therefore, new preventative methods are needed to further engage and educate individuals and communities about health-conscious diets. Microgreen cultivation utilizes a reduced cost, low-footprint, recyclable, weather-independent, and transportable method to provide less nutrition-privileged communities with exposure to healthy foods within one …

Effect Of Sowing Date And Topping Process On Some Morphological And Productivity Traits Of Cotton Under A Zone Condition In Al Hasaka Governorate/ Syria, تأثير موعد الزراعة وعملية التطويش في بعض الصفات الشكلية والإنتاجية لمحصول القطن في ظروف منطقة الاستقرار الأولى لمحافظة الحسكة/سورية, Momena Rakkad

Arab Journal of Arid Environments المجلة العربية للبيئات الجافة

This research was carried out during growing season 2014 in Tel Half village (AL Hasaka governorate/Syria) In order to study the effect of sowing date and topping process on some morphological and productivity Traits of cotton (Var. Halab-90 ), planting were applied in tow dates, the first of date planting took place in 19/4/2014, and the second in 5/5/2014.and applying three methods of topping main stem topping, fruit shoots topping, total topping (main stem topping and fruit shoots topping) in addition to control treatment (without topping), The experiment was design according to spilt plot design with three replication, where main …

Management Strategies And Distribution Of Aphanomyces Root Rot Of Alfalfa (Medicago Sativa), A Continuing Threat To Forage Production In The United States, Jennifer M. Giles, Conner L. Tordsen, Travis R. Rebstock, Bruna Bucciarelli, Deborah A. Samac, Andrew E. Sathoff

Research & Publications

Alfalfa (Medicago sativa) is one of several legumes that is affected by Aphanomyces root rot (ARR) caused by Aphanomyces euteiches. Symptoms of ARR on alfalfa seedlings include a yellow-grey discolouration of roots, rotting and loss of lateral roots, stunted growth, chlorotic foliage and reduction of nitrogen-producing nodules on roots. Infection can also occur on adult plants leading to loss of lateral roots and nodules. At the seedling stage, ARR decreases alfalfa stand establishment, and field longevity is reduced when adult plants are infected. A. euteiches is an oomycete pathogen that has motile zoospores and thick-walled oospores that …

Extreme Development Of Dragon Fruit Agriculture With Nighttime Lighting In Southern Vietnam, Shenyue Jia, Son V. Nghiem, Seung-Hee Kim, Laura Krauser, Andrea E. Gaughan, Forest R. Stevens, Menas Kafatos, Khanh D. Ngo

Institute for ECHO Faculty Books and Book Chapters

Dragon fruit is widely grown in Southeast Asia and other tropical or subtropical regions. As a high-value cash crop ideal for exportation, dragon fruit cultivation has boomed during the past decade in southern Vietnam. Light supplementing during the winter months using artificial lighting sources is a widely adopted cultivation technique to boost productivity in the major dragon fruit planting regions of Vietnam. The application of electric lighting at night leads to a significant increase of nighttime light (NTL) observable by satellite sensors. The strong seasonality signal of NTL in dragon fruit cultivation enables identifying dragon fruit plantations using NTL images. …

Effect Of Solitary And Combined Use Of Cover Crops On Soilborne Disease Suppressiveness In Woody Ornamental Nursery Production Systems, Madhav Parajuli, Fulya Baysal-Gurel, Milan Panth

Student Research

Cover crops are known to be effective in reducing soilborne diseases in woody ornamentals. However, it remains unknown how solitary and combined uses of cover crops influence soilborne disease, and whether these effects differ with seed rate. The objective of this study was to explore the impacts of cover crops, in solitary and combined use, on soilborne disease suppressiveness in woody ornamental nursery production systems. Soils were sampled from the established red maple (Acer rubrum L.) plantation grown with and without cover crops [crimson clover (Trifolium incarnatum L.)] or triticale (× Triticosecale W.) or (their mixture)] following the cover crop …

Seabem: An Artificial Intelligence Powered Web Application To Predict Cover Crop Biomass, Aime Christian Tuyishime, Andrea Basche

Honors Program: Senior Projects (Public)

SEABEM, the Stacked Ensemble Algorithms Biomass Estimator Model, is a web application with a stacked ensemble of Machine Learning (ML) algorithms running on the backend to predict cover crop biomass for locations in Sub-Saharan. The SEABEM model was developed using a previously developed database of crop growth and yield that included site characteristics such as latitude, longitude, soil texture (sand, silt, and clay percentages), temperature, and precipitation. The goal of SEABEM is to provide global farmers, mainly small-scale African farmers, the knowledge they need before practicing and benefiting from cover crops while avoiding the expensive and time-consuming operations that come …

A Global Soil Spectral Calibration Library And Estimation Service, Keith D. Sheperd, Rich Ferguson, David Hoover, Fenny Van Egmond, Jonathan Sanderman, Yufeng Ge

Department of Agronomy and Horticulture: Faculty Publications

There is growing global interest in the potential for soil reflectance spectroscopy to fill an urgent need for more data on soil properties for improved decision-making on soil security at local to global scales. This is driven by the capability of soil spectroscopy to estimate a wide range of soil properties from a rapid, inexpensive, and highly reproducible measurement using only light. However, several obstacles are preventing wider adoption of soil spectroscopy. The biggest obstacles are the large variation in the soil analytical methods and operating procedures used in different laboratories, poor reproducibility of analyses within and amongst laboratories and …

Estimating Effects Of Radiation Frost On Wheat Using A Field-Based Frost Control Treatment To Stop Freezing Damage, Brenton A. Leske, Ben Biddulph

Grain and Other Field Crops Research Articles

Crop phenotyping experiments have long struggled to have a reliable control treatment that excludes frost and associated freezing damage to plants. Previous attempts used a barrier, such as a removable shelter or cloth to exclude frost. However, these methods were labour intensive and varied in their effectiveness. An automated diesel heater was used to protect field plots of wheat (Triticum aestivum L.) from frost damage. In 2018 and 2019 there were 22 and 33 radiation frost events from July to October at the field site. The heater maintained canopy air temperature above freezing (>0 °C) for the duration of …

Southeast Asia Must Narrow Down The Yield Gap To Continue To Be A Major Rice Bowl, Shen Yuan, Alexander M. Stuart, Alice G. Laborte, Juan I. Rattalino Edreira, Achim Dobermann, Le Vu Ngoc Kien, Lưu Thị Thúy, Kritkamol Paothong, Prachya Traesang, Khin Myo Tint, Su Su San, Marcelino Q. Villafuerte Ii, Emma D. Quicho, Anny Ruth P. Pame, Rathmuny Then, Rica Joy Flor, Neak Thon, Fahmuddin Agus, Nurwulan Agustiani, Nanyan Deng, Tao Li, Patricio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Southeast Asia is a major rice-producing region with a high level of internal consumption and accounting for 40% of global rice exports. Limited land resources, climate change and yield stagnation during recent years have once again raised concerns about the capacity of the region to remain as a large net exporter. Here we use a modelling approach to map rice yield gaps and assess production potential and net exports by 2040. We find that the average yield gap represents 48% of the yield potential estimate for the region, but there are substantial differences among countries. Exploitable yield gaps are relatively …

Editorial: Genomics-Enabled Triticeae Improvement, Xue-Feng Ma, Xianchun Xia, Shuyu Liu, P. Stephen Baenziger, Hakan Özkan

Department of Agronomy and Horticulture: Faculty Publications

No abstract provided.

Building Sustainable Rangeland Management Systems Through A One System Innovative Approach, Benedict C. Irwin, T. A. Ameha, M. Mangano, B. W. Solomon, T. Wood

IGC Proceedings (1977-2023)

Working through a collaborative working partnership between the USAID Feed the Future Resilience in Pastoralist Areas (RiPA)1 program and Land Governance Activity (LGA)2 and selected technical partners, these new rangeland programs aim to build on significant breakthrough successes in rangeland management from their previous lowland programs3. These new lowlands pastoralist development programs have been purposely positioned by USAID to coordinate, collaborate and combine working activities focused on the continued improvement and strengthening of rangeland management systems in the lowlands of Ethiopia. In light of this positioning, it is proposed that the programs work together to build a comprehensive sustainable rangeland …

Sustainable Development And The Transformation Of Female Rural Labor: The Case Of Woman Cattle Ranchers In Uruguay, Virginia Courdin

IGC Proceedings (1977-2023)

Internationally, rural women are considered key to sustainable development. However, in the Uruguayan livestock sector, women’s work is largely unrecognized by public policy makers, causing younger women to migrate, and resulting in the "masculinization" of livestock husbandry. In Uruguay, extensive livestock production (range livestock) analysis has historically ignored the genuinely productive role that women play in rangelands, limiting the visibility of their action to reproductive activities while ignoring their importance in terms of income generation, herd management, networking, strategic planning, etc. Although family production integrates women, their work is often invisible, subsumed within domestic chores or seen as "helping" the …

Source Of Off-Type Frequencies In Winter Wheat Varieties, Michaela Benes

Honors Program: Senior Projects (Public)

The enzyme polyphenol oxidase (PPO) is undesirable in most wheat products due to the discoloration it causes. Purifying wheat varieties through selective breeding is the best way at getting rid of PPO in a variety. The variety NW15443 was planted in both a field in McCook, NE, and in a greenhouse in Lincoln, NE. Individual heads were snapped from the field and the greenhouse seed was harvested in bulk. After completing a PPO test of the seed, it was determined that the percentages of off-type frequencies from the field seed and the greenhouse seed were 11% and 3.6%, respectively. Using …

Ruminant Livestock Production Systems And Imperatives For Sustainable Development, J. W. Smith

IGC Proceedings (1977-2023)

No abstract provided.

Biodiversity Conservation And Sustainable Livelihoods In Rangelands: Trends, Challenges And Opportunities, J. Waithaka

IGC Proceedings (1977-2023)

Rangelands cover about 54% of the earth’s surface and are essential for agricultural and livestock production, environmental protection and the in-situ conservation of genetic resources. Despite providing services that support life on earth, rangelands have been neglected to a large extent when compared to other types of ecosystems. This paper provides an overview of the importance of rangelands in conserving biodiversity and supporting the livelihoods of millions of people globally. Rangelands have lost ecological integrity due to unsustainable anthropogenic land-use changes and impacts. It is estimated that over 80% of Key Biodiversity Areas (KBAs) are either not adequately protected or …

Feasibility Of Organic Certification Of Sheep And Goats Produced In Pastoral Systems In Northern Kenya, F. Von Steimker, H. T. Wario, B. Kaufmann

IGC Proceedings (1977-2023)

In pastoral systems of Kenya, sale of small ruminants is the main regular income source for most households. Although the meat of small ruminants produced in Marsabit county is preferred in the domestic market, no mechanisms are in place that allow for a respective price differentiation. Establishing value chains for labelled sheep and goat meat would be an option to allow pastoralists to profit from their high process and product quality. The aim of the current study is to assess the requirements and feasibility to establish a value chain for labelled products (e.g. origin labelled, organic certified) together with the …

Uses Of Native Plant Species Of A Communal Rangeland Within ‘Sierra De Huautla’ Protected Area, México, E. Cortés-Díaz, T. González-Bonilla, L. López-Aguilar, Pedro A. Martínez-Hernández, A. Hernández-Tapia

IGC Proceedings (1977-2023)

Sustainability of communal rangelands has become a major concern at national and international levels because land use conflicts and associated social conflicts allows for over-utilization of selected species making a high pressure on them and given away their places to species with no use at all becoming lands degraded and unproductive. The objective of the study was to determine floristic composition and native plant uses by local peasants. The range surface is of 4262 ha, belongs to the communal land ‘El Limon’, in Tepalcingo, Morelos, Mexico, and it is within the Natural Reserve Area “Sierra de Huautla”. Native vegetation is …

Beta Macrophyta Diversity Analysis In The Temporary Pond Habitats Of Vettangudi Birds Sanctuary, Kannan Dorai Pandian, Mahesh Mony

IGC Proceedings (1977-2023)

Three temporary ponds of Vettangudi birds sanctuary situate in very close proximity, located in Sivaganga District, Tamil Nadu state of India. However similar eco-climatic conditions prevailing at these pond habitat, those ponds experience the varying nature of biotic interactions. Since the habitat conditions and their land-use pattern have the major role on the vegetation diversity. Temporary ponds of Vettangudi Birds Sanctuary has the characteristic alternate drying and inundation at varying levels and this environmental condition in addition to the biotic influence over the habitat ecology and its vegetation diversity. Understanding this specific relationship is pivotal in the development of management …

Sustainable Intensification In Crop-Livestock Systems, P. Rovira, Paulo C. De F. Carvalho, J. Terra, F. Lattanzi, R. Pizzio, W. Ayala

IGC Proceedings (1977-2023)

Extensive livestock production is the main animal source food system in the Pampas and Campos sub-regions in South America. Beef cattle and sheep convert forage biomass that humans cannot eat into nutrient-dense human-edible foods (meat and milk) and valuable co-products (wool). However, diverse global pressures are acting on Pampas systems including increasing demand for protein sources (food security), climate change, environmental footprint, and competition for land. The integration of small areas of pasture-crop rotations is an alternative for increasing efficiency and sustainable intensification of agroecosystems based on natural grasslands. Rotations led by improved pastures increase the carrying capacity and productivity …

Nutritional Sensitivity Per Morphological Component In Urochloa Hybrid Under Tropical Environments, Bernal-Flores Alvaro, E. A. Pizarro, Adrián R. Quero-Carrillo, Paulino Pérez-Rodríguez, Ramon Rodolfo Ruíz, Thiago Da Cruz Madeira

IGC Proceedings (1977-2023)

Camello^® (GP 3025) is a tolerant to drought Urochloa hybrid grass showing good forage production, early flowering with high regrowth rates. The objective was to define nutrient concentration changes by morphological component and, their differences for two tropical contrasting environments. Nutrient concentrations differences (P≤0.05) were observed among morphological components over time. In environments (Aw₁) the morphological components showed higher average protein content in comparison to that from hostile conditions (Aw₀); lamina (12.2% vs 10.4%), pseudostem (9.5% vs 6.6%) and sheath (9.8% vs 6.8%). Hostile environments (Aw0) promoted increases for FAD (47.9%, 46.9%, pseudostem …

The Comparative Effects Of Short Duration, High Density And Conventional, Rotational Grazing On Different Soil, Vegetation And Animal Parameters In Dry And Mesic Grasslands Of South Africa, Jamie Paulse, Paul Malan, Nico Smit

IGC Proceedings (1977-2023)

Short duration, high density grazing is a grazing management strategy that incorporates the rotation of large livestock herds, often at double or triple the normal prescribed stocking densities of the specific area. It is claimed that this type of grazing management can improve rangeland health by improving soil and vegetation condition, and subsequently influencing animal performance. Regardless of the scarcity of scientific evidence validating these claims, the change from conventional rotational grazing systems to short duration, high density grazing systems is on the increase in South Africa. This study aims to assess these claims, through the quantification of various rangeland …

Sustainable Management Of Rangelands: An Assessment Of Invasion Cover Trajectories And Their Contribution To Invasion Management In Marigat Sub-County, Kenya, Beatrice Adoyo, Albrecht Ehrensperger, Mikalitsa S. Mukhovi, Boniface Kiteme, Purity Mbaabu Rima, Sandra Eckert, Simon Choge, Urs Schaffner

IGC Proceedings (1977-2023)

Invasive alien species have complex spatiotemporal patterns of spread beyond geographical and jurisdictional boundaries. This calls for a coordinated management approach that is spatially explicit, extends beyond individual plot levels, and incorporates land users’ perceptions and decisions. This study, therefore, aims at assessing spatiotemporal invasion trajectories of the invasive tree Prosopis juliflora in Baringo County, Kenya, and evaluating their possible relation to land users’ management decisions. Pre-classified land cover data over a seven-year time period (1988–2016) were reclassified based on the presence or absence of P. juliflora and integrated into ArcGIS to produce P. juliflora cover trajectories for analysis. The …

Enhancing Grassland Biodiversity And Its Consequences For Grassland Management And Utilisation, Johannes Isselstein

IGC Proceedings (1977-2023)

Key points

1. Grasslands make an important contribution to the biodiversity of rural landscapes.

2. Biodiversity has the potential to support the production function of grassland. The conditions for this are largely unexplored.

3. The enhancement of biodiversity on agriculturally improved, species-poor grasslands is difficult to achieve due to seed limitation and high residual soil fertility.

4. Measures to overcome constraints are addition of propagules, depletion of soil nutrients, and the use of specific sward treatments.

5. Agri-environmental schemes will play an increasing role in achieving the biodiversity targets in the future, however, the efficiency of such schemes needs improvement.

Application Of Pheromone Is Potential Ecological Approach In Management Of Tuta Absoluta In Tomatoes: The Case Of Ruaha River Basin In Iringa, Tanzania, Theonest Kombe, Nicodemus D. Matojo, Fikira Kimbokota

Journal of Humanities and Social Sciences

Tomato leaf miner, Tuta absoluta (Meyrick) (Lepidoptera: Gelechiidae), is currently considered to be one of the most destructive insect pests of tomatoes worldwide. The present study was conducted in three study sites along Ruaha River Basin, Iringa, Tanzania, to assess community awareness about T. absoluta infestation and its management. The study also evaluated the susceptibility of three tomato varieties against T. absoluta in a greenhouse setting, as well as the effect of colours of traps and doses of pheromone in attracting T. absoluta in a field environment. The field survey revealed that 97% of the respondents were aware of the …