Oceanography and Atmospheric Sciences and Meteorology Commons^™

Semi-Supervised Adversarial Domain Adaptation For Seagrass Detection Using Multispectral Images In Coastal Areas, Kazi Aminul Islam, Victoria Hill, Blake Schaeffer, Richard Zimmerman, Jiang Li

Electrical & Computer Engineering Faculty Publications

Seagrass form the basis for critically important marine ecosystems. Previously, we implemented a deep convolutional neural network (CNN) model to detect seagrass in multispectral satellite images of three coastal habitats in northern Florida. However, a deep CNN model trained at one location usually does not generalize to other locations due to data distribution shifts. In this paper, we developed a semi-supervised domain adaptation method to generalize a trained deep CNN model to other locations for seagrass detection. First, we utilized a generative adversarial network loss to align marginal data distribution between source domain and target domain using unlabeled data from …

Flood Detection Using Multi-Modal And Multi-Temporal Images: A Comparative Study, Kazi Aminul Islam, Mohammad Shahab Uddin, Chiman Kwan, Jiang Li

Electrical & Computer Engineering Faculty Publications

Natural disasters such as flooding can severely affect human life and property. To provide rescue through an emergency response team, we need an accurate flooding assessment of the affected area after the event. Traditionally, it requires a lot of human resources to obtain an accurate estimation of a flooded area. In this paper, we compared several traditional machine-learning approaches for flood detection including multi-layer perceptron (MLP), support vector machine (SVM), deep convolutional neural network (DCNN) with recent domain adaptation-based approaches, based on a multi-modal and multi-temporal image dataset. Specifically, we used SPOT-5 and RADAR images from the flood event that …

Missing Data Imputation Of High-Resolution Temporal Climate Time Series Data, Eben Afrifa-Yamoah, Ute A. Mueller, S. M. Taylor, A. J. Fisher

Research outputs 2014 to 2021

© 2020 The Authors. Meteorological Applications published by John Wiley & Sons Ltd on behalf of the Royal Meteorological Society. Analysis of high-resolution data offers greater opportunity to understand the nature of data variability, behaviours, trends and to detect small changes. Climate studies often require complete time series data which, in the presence of missing data, means imputation must be undertaken. Research on the imputation of high-resolution temporal climate time series data is still at an early phase. In this study, multiple approaches to the imputation of missing values were evaluated, including a structural time series model with Kalman smoothing, …

Development Of An Infrared Pollution Index To Identify Ground-Level Compositional, Particle Size, And Humidity Changes Using Himawari-8, M. Sowden, D. Blake, D. Cohen, A. Atanacio, Ute Mueller

Research outputs 2014 to 2021

Speciated air quality data informs health studies and quantitates impacts. However, monitoring is concentrated around populated regions whilst, large remote and rural regions remain unmonitored despite risks of dust-storms or wild-fires. Sub-hourly, infrared, geostationary data, such as the 10-min data from Himawari 8, could potentially be used to quantify regional air quality continually. Monitoring of Aerosol Optical Depth (AOD) is restricted to visible spectra (i.e. daytime only), while newer quantification methods using geostationary infrared (IR) data have focused on detecting the presence, or absence, of an event. Limited attention has been given to the determination of particle size and aerosol …

Which Dual-Band Infrared Indices Are Optimum For Identifying Aerosol Compositional Change Using Himawari-8 Data?, Miles Sowden, D Blake

Research outputs 2014 to 2021

Aerosol optical depth algorithms predominantly use the visible portion of the electromagnetic spectrum. However, quantifying sporadic dust events throughout the full 24-h period requires using continuous wavelengths such as infrared (IR). Identifying aerosols, using IR from geostationary data, has relied on subtraction indices rather than normalised differences. Limited attention has been given to determining which IR indices could be suitable for identifying aerosol compositional change. Suitable IR indices could potentially result in multi-spectral data from geostationary satellites, such as Himawari, being used to separate dust from other types of aerosols.

This study evaluated three index types: subtraction (brightness temperature difference …

Annual And Seasonal Surface Circulation Over The Mid Atlantic Bight Continental Shelf Derived From A Decade Of High Frequency Radar Observations, Hugh Roarty, Scott Glenn, Joseph Brodie, Laura Nazzaro, Michael Smith, Ethan Handel, Josh Kohut, Teresa Updyke, Larry Atkinson, William Boicourt, Wendell Brown, Harvey Seim, Mike Muglia, Haixing Wang, Donglai Gong

CCPO Publications

A decade (2007–2016) of hourly 6‐km‐resolution maps of the surface currents across the Mid‐Atlantic Bight (MAB) generated by a regional‐scale High Frequency Radar network are used to reveal new insights into the spatial patterns of the annual and seasonal mean surface flows. Across the 10‐year time series, temporal means and interannual and intra‐annual variability are used to quantify the variability of spatial surface current patterns. The 10‐year annual mean surface flows are weaker and mostly cross‐shelf near the coast, increasing in speed and rotating to more alongshore directions near the shelfbreak, and increasing in speed and rotating to flow off‐shelf …

Developing A Uas-Deployable Methane Sensor Using Low-Cost Modular Open-Source Components, Gavin Demali

Williams Honors College, Honors Research Projects

This project aimed to develop a methane sensor for deployment on an unmanned aerial system (UAS), or drone, platform. This design is centered around low cost, commercially available modular hardware components and open source software libraries. Once successfully developed, this system was deployed at the Bath Nature Preserve in Bath Township, Summit County Ohio in order to detect any potential on site fugitive methane emissions in the vicinity of the oil and gas infrastructure present. The deliverables of this project (i.e. the data collected at BNP) will be given to the land managers there to better inform future management and …

Optimization Of Regional Scale Numerical Weather Prediction & Air Quality Model For The Paso Del Norte Region, Suhail Mahmud

Open Access Theses & Dissertations

Improvement of the Accuracy and Forecast capability of the Numerical Weather Prediction (NWP) models and Air Quality Models (AQM) are critical issues in today's scientific study of Meteorology and Air Pollution. The models for these predictions are dependent on topography, climate, initial and boundary conditions, domain size, and computational efficiency. Different techniques such as Data Assimilation, Ensemble Methods, Increased Computing Capacity to achieve higher model resolution, and Improved Physics Schemes can be used to address this problem. In this study, the NWP models, the Weather and Research Forecast (WRF), and the HYSPLIT models, were enhanced for the Paso Del Norte …

Internet Of Things For Environmental Sustainability And Climate Change, Abdul Salam

Faculty Publications

Our world is vulnerable to climate change risks such as glacier retreat, rising temperatures, more variable and intense weather events (e.g., floods, droughts, and frosts), deteriorating mountain ecosystems, soil degradation, and increasing water scarcity. However, there are big gaps in our understanding of changes in regional climate and how these changes will impact human and natural systems, making it difficult to anticipate, plan, and adapt to the coming changes. The IoT paradigm in this area can enhance our understanding of regional climate by using technology solutions, while providing the dynamic climate elements based on integrated environmental sensing and communications that …

Internet Of Things For Water Sustainability, Abdul Salam

Faculty Publications

The water is a finite resource. The issue of sustainable withdrawal of freshwater is a vital concern being faced by the community. There is a strong connection between the energy, food, and water which is referred to as water-food-energy nexus. The agriculture industry and municipalities are struggling to meet the demand of water supply. This situation is particularly exacerbated in the developing countries. The projected increase in world population requires more fresh water resources. New technologies are being developed to reduce water usage in the field of agriculture (e.g., sensor guided autonomous irrigation management systems). Agricultural water withdrawal is also …

Assessing Agricultural Risk Management Using Historic Crop Insurance Loss Data Over The Ogallala Aquifer, Julian Reyes, Emile Elias, Erin M.K. Haacker, Amy Kremen, Lauren Parker, Caitlin Rottler

Department of Earth and Atmospheric Sciences: Faculty Publications

Much of the agricultural production in the Ogallala Aquifer region relies on groundwater for irrigation. In addition to declining water levels, weather and climate-driven events affect crop yields and revenues. Crop insurance serves as a risk management tool to mitigate these perils. Here, we seek to understand what long-term crop insurance loss data can tell us about agricultural risk management in the Ogallala. We assess patterns and trends in crop insurance loss data from the U.S. Department of Agriculture Risk Management Agency. Indemnities, or insurance payments, totaled $22 billion from 1989–2017 for the 161 counties that overlie the Ogallala Aquifer. …

Soil Carbon Dynamics And Greenhouse Gas Emissions In Conservation Tillage Systems At Multiple Scales, Yawen Huang

Theses and Dissertations--Plant and Soil Sciences

Conservation tillage practices like no-tillage and reduced tillage have been widely implemented worldwide, with expectations they would provide multiple benefits (e.g., yield enhancement and soil carbon sequestration) for food security and climate adaptation and mitigation. However, the adoption of conservation tillage faces both opportunities and challenges. A knowledge gap still exists regarding the effects of conservation tillage on the carbon cycle in agroecosystems. This dissertation reflects a comprehensive evaluation of conservation tillage at multiple scales using an integrated systems approach, a combination of data synthesis, the agriculture ecosystem model, and field observations and measurements. I first conducted a meta-analysis to …

Assessing The Hierarchy Of Long-Term Environmental Controls On Diatom Communities Of Yellowstone National Park Using Lacustrine Sediment Records, Victoria Chraibi, Sherilyn C. Fritz

Department of Earth and Atmospheric Sciences: Faculty Publications

An ecosystem’s ability to maintain structure and function following disturbance, defined as resilience, is influenced by a hierarchy of environmental controls, including climate, surface cover, and ecological relationships that shape biological community composition and productivity. This study examined lacustrine sediment records of naturally fishless lakes in Yellowstone National Park to reconstruct the response of aquatic communities to climate and trophic cascades from fish stocking. Sediment records of diatom algae did not exhibit a distinct response to fish stocking in terms of assemblage or algal productivity. Instead, 3 of 4 lakes underwent a shift to dominance by benthic diatom species from …

The Fluxnet2015 Dataset And The Oneflux Processing Pipeline For Eddy Covariance Data, Gilberto Pastorello, Timothy Arkebauer, Dave P. Billesbach, Anatoly Gitelson, Adam Liska, Andrew Suyker, Elizabeth Walter-Shea, More Than 200 Other

Adam Liska Papers

The FLUXNET2015 dataset provides ecosystem-scale data on CO2, water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as …

Acoustic Space Occupancy: Combining Ecoacoustics And Lidar To Model Biodiversity Variation And Detection Bias Across Heterogeneous Landscapes, Danielle I. Rappaport, J. Andrew Royle, Douglas C. Morton

United States Geological Survey: Staff Publications

There is global interest in quantifying changing biodiversity in human-modified landscapes. Ecoacoustics may offer a promising pathway for supporting multi-taxa monitoring, but its scalability has been hampered by the sonic complexity of biodiverse ecosystems and the imperfect detectability of animal-generated sounds. The acoustic signature of a habitat, or soundscape, contains information about multiple taxa and may circumvent species identification, but robust statistical technology for characterizing community-level attributes is lacking. Here, we present the Acoustic Space Occupancy Model, a flexible hierarchical framework designed to account for detection artifacts from acoustic surveys in order to model biologically relevant variation in acoustic space …

Human-Associated Species Dominate Passerine Communities Across The United States, Helen R. Sofaer, Curtis H. Flather, Catherine S. Jarnevich, Kristin P. Davis, Liba Pejchar

United States Geological Survey: Staff Publications

Aim: Human development and agriculture can have transformative and homogenizing effects on natural systems, shifting the composition of ecological communities towards non-native and native species that tolerate or thrive under human-dominated conditions. These impacts cannot be fully captured by summarizing species presence, as they include dramatic changes to patterns of species abundance. However, how human land use patterns and species invasions intersect to shape patterns of abundance and dominance within ecological communities is poorly understood even in well-known taxa.

Location: Conterminous United States.

Time period: 2010–2012.

Major taxa studied: Passeriformes.

Methods: We analyse continental-scale monitoring data to study the proportional …

Ecosystem Processes, Land Cover, Climate, And Human Settlement Shape Dynamic Distributions For Golden Eagle Across The Western Us, J.D. Tack, Barry R. Noon, Zachary Bowen, Brad C. Fedy

United States Geological Survey: Staff Publications

Species–environment relationships for highly mobile species outside of the breeding season are often highly dynamic in response to the collective effects of everchanging climatic conditions, food resources, and anthropogenic disturbance. Capturing dynamic space-use patterns in a model-based framework is critical as model inference often drives place-based conservation planning. We applied dynamic occupancy models to broad-scale golden eagle Aquila chrysaetos survey data collected annually from 2006 to 2012 during the late summer post-fledging period in the western US. We defined survey sites as 10 km transect segments with a 1 km buffer on either transect side (n = 3540). Derived estimates …

Human-Associated Species Dominate Passerine Communities Across The United States, Helen R. Sofaer, Curtis H. Flather, Catherine S. Jarnevich, Kristin P. Davis

United States Geological Survey: Staff Publications

Aim: Human development and agriculture can have transformative and homogenizing effects on natural systems, shifting the composition of ecological communities towards non-native and native species that tolerate or thrive under human-dominated conditions. These impacts cannot be fully captured by summarizing species presence, as they include dramatic changes to patterns of species abundance. However, how human land use patterns and species invasions intersect to shape patterns of abundance and dominance within ecological communities is poorly understood even in well-known taxa.

Location: Conterminous United States.

Time period: 2010–2012.

Major taxa studied: Passeriformes.

Methods: We analyse continental-scale monitoring data to study the proportional …

Acoustic Space Occupancy: Combining Ecoacoustics And Lidar To Model Biodiversity Variation And Detection Bias Across Heterogeneous Landscapes, Danielle I. Rappaport, J. Andrew Royle, Douglas C. Morton

United States Geological Survey: Staff Publications

There is global interest in quantifying changing biodiversity in human-modified landscapes. Ecoacoustics may offer a promising pathway for supporting multi-taxa monitoring, but its scalability has been hampered by the sonic complexity of biodiverse ecosystems and the imperfect detectability of animal-generated sounds. The acoustic signature of a habitat, or soundscape, contains information about multiple taxa and may circumvent species identification, but robust statistical technology for characterizing community-level attributes is lacking. Here, we present the Acoustic Space Occupancy Model, a flexible hierarchical framework designed to account for detection artifacts from acoustic surveys in order to model biologically relevant variation in acoustic space …

Characterization Of Pallid Sturgeon (Scaphirhynchus Albus) Spawning Habitat In The Lower Missouri River, Caroline M. Elliott, Aaron J. Delonay, Kimberly Chojnacki, Robert B. Jacobson

United States Geological Survey: Staff Publications

Acipenseriformes (sturgeons and paddlefish) globally have declined throughout their range due to river fragmentation, habitat loss, overfishing, and degradation of water quality. In North America, pallid sturgeon (Scaphirhynchus albus) populations have experienced poor to no recruitment, or substantial levels of hybridization with the closely related shovelnose sturgeon (S. platorynchus). The Lower Missouri River is the only portion of the species’ range where successful reproduction and recruitment of genetically pure pallid sturgeon have been documented. This paper documents spawning habitat and behavior on the Lower Missouri River, which comprises over 1,300 km of unfragmented river habitat. The …