Oceanography Commons^™

Comment On "Using An Adcp To Estimate Turbulent Kinetic Energy Dissipation Rate In Sheltered Coastal Waters", Ann E. Gargett

CCPO Publications

Greene et al. revisit the suggestion that the turbulent kinetic energy dissipation rate could be estimated through a "large-eddy estimate," employing acoustic measurements of velocity fields associated with the largest energy-containing scales of ocean turbulence. While the large-eddy estimate as originally proposed used vertical velocity and a vertical eddy length scale, Greene et al. chose instead to substitute a horizontal length scale for the latter. This comment argues that combining a horizontal scale for length with a vertical velocity scale produces a large-eddy estimate of the dissipation rate that is accurate only if the energy-containing eddies are isotropic, and that …

Micro-Spi Sediment Profile Imaging Micro-Inspector, Andrew P. Corvin, Caleb T. Davies, Matt R. Ferrari

Mechanical Engineering

This project was proposed by Dr. Brian Paavo through a desire to more easily study the benthic sediment layers of the ocean. To do so, he asked us to build a simple and compact machine for use in sediment profile imagery (SPI). Although devices like this already exist, they are all large scale devices that require a ship with a crane to deploy, which is expensive and time consuming. Instead, he desired a “micro” SPI, which is capable of being deployed from a small vessel that can easily navigate shallow waters. Our interpretation of these requirements was as follows: a …

The Effect Of Watershed Runoff And Sediment Resuspension On Turbidity And Sediment Deposition In St. John, Us Virgin Islands: Implications For Watershed And Marine Development And Restoration In Bays With Coral Reefs, Stephen E. Campbell

Theses

In the US Virgin Islands (USVI), land-based (terrigenous) sedimentation has been identified as a major cause of coral stress. Development, such as the building of unpaved roads in steep coastal watersheds, has increased sediment yields and marine terrigenous sedimentation by up to an order of magnitude above background levels. When activated during storm events, ephemeral streams transport sediment from the watershed to coastal waters. Once deposited on the seafloor, resuspension of benthic sediments can further increase turbidity and deposition. However, isolating the relative contributions of runoff and resuspension to turbidity and deposition using conventional sediment trap monitoring has been challenging. …

Larval Rockfish Diversity Abundance Dynamics In Association With A Marine Protected Area In The Southern California Bight, Dustin Chen

Theses

Marine protected areas (MPAs) are areas aimed at protecting natural and cultural resources that are often proposed as a way to alleviate the effects of overfishing on populations of targeted species; these areas have varying degrees of fishing and recreational use restrictions. In order to assess MPA efficacy, it is important to determine the mechanisms by which the presence of MPAs affect reproductive output within and potentially even beyond their boundaries. I attempted to address this through studying the responses of rockfish (Sebastes spp.) larval abundances to the presence of the Cowcod Conservation Areas (CCAs) located within the Southern California …

Use Of First Pelvic, Second Pelvic, And Fourth Anal Rays For Estimating Age Of Muskellunge (Esox Masquinongy), Marinda R. Cornett

Honors Theses

While cleithra are the most popularly used calcified structure used to estimate age of Muskellunge (Esox masquinongy), the use of fin rays as an age estimation structure has been investigated as a nonlethal alternative. My objectives were to: (1) to compare the accuracy and precision of estimating age using first pelvic, second pelvic, and fourth anal rays from 46 known age Muskellunge and (2) to analyze a larger sample (n = 120) of fourth anal rays to estimate age. Ages were estimated blindly by three readers independently from all available structures. Different analyses of precision and accuracy had conflicting results, …

A Multibeam Bathymetric Investigation Of Changes In Bedform Morphology Of The Little River Inlet As A Result Of Hurricane Matthew, Malarie O'Brien

Honors Theses

A hybrid scholarly-research paper on the use of multibeam sonar data in seafloor mapping and seafloor analysis was written to satisfy Honors Program requirements. Literature review of multibeam sonar technology explored the improving concept of mapping the seafloor via acoustic methods. The review also investigated improvements and applications of multibeam data analysis techniques, which have the ability to map the seafloor as well as characterize the seafloor by morphology or sediment content. The review then explored previous studies conducted on the Little River Inlet, SC, finding the inlet to be particularly understudied in the field of sediment morphology. Three multibeam …

Do Halogenated Natural Products Bioaccumulate In Narragansett Bay?, Christine Gardiner, Anna Robuck, Rainer Lohmann

Senior Honors Projects

In recent decades, a new family of chemical compounds has begun to garner research attention—halogenated natural products, or HNPs. These chemicals are produced by algae, bacteria, worms, and sponges, and many are structurally similar to harmful manmade compounds, such as polychlorinated diphenyls (PCBs), or brominated flame retardants (PBDEs), which are known to cause cancer, reproduction issues, endocrine disruption, and death. While HNPs are produced naturally, they are still considered pollutants because of their bioaccumulative behavior and apparent toxicity.

Currently, there is limited research on their presence and effects, with a few studies from Europe and the Pacific highlighting their importance …

Age, Growth, And Reproduction Of Vermilion Snapper (Rhomboplites Aurorubens) In The North-Central Gulf Of Mexico, Trevor Dalton Moncrief

Master's Theses

Vermilion Snapper is a commonly harvested species of reef fish in the northern Gulf of Mexico (GOM). It supports both a large commercial and popular recreational fishery, however knowledge of this fish’s life history is limited spatially. Non-linear curve fitting was used to estimate growth parameters and Akaike information criteria (AIC) was used to determine relative model fit. The 2-parameter von Bertalanffy growth function provided the best model fit and lowest AIC score. Histological examination indicated that Vermilion Snapper are batch spawners with asynchronous oocyte development. Additionally, 17% of Vermilion Snapper in the actively spawning phase containing 24 hour POF’s …

Small-Scale Farming Of Sandfish (Holothuria Scabra) At Unguja Ukuu, Zanzibar, Claire Hacker

Independent Study Project (ISP) Collection

The biological and social components of sandfish farming were studied at Unguja Ukuu, Zanzibar. Measurement of temperature and depth, along with quadrat sampling of substrate and sea cucumbers, led to recommendations for future management of depth, biomass per area, disease and crabs, and substrate. Interviews revealed the role and potential benefits of sea cucumber farming for communities. Several barriers to, and complications with, the expansion of sea cucumber farming were also identified. This study provided information for improvement of this farm and hoped to spread knowledge of sandfish farming to Zanzibaris, who may benefit economically from the practice.

Separating Decadal Global Water Cycle Variability From Sea Level Rise, B. D. Hamlington, J. T. Reager, M.-H. Lo, K. B. Karnauskas, R. R. Leben

CCPO Publications

Under a warming climate, amplification of the water cycle and changes in precipitation patterns over land are expected to occur, subsequently impacting the terrestrial water balance. On global scales, such changes in terrestrial water storage (TWS) will be reflected in the water contained in the ocean and can manifest as global sea level variations. Naturally occurring climate-driven TWS variability can temporarily obscure the long-term trend in sea level rise, in addition to modulating the impacts of sea level rise through natural periodic undulation in regional and global sea level. The internal variability of the global water cycle, therefore, confounds both …

Actively Forming Kuroko-Type Volcanic-Hosted Massive Sulfide (Vhms) Mineralization At Iheya North, Okinawa Trough, Japan, Christopher J. Yeats, Steven P. Hollis, Angela Halfpenny, Juan-Carlos Corona, Crystal Laflamme, Gordon Southam, Marco Fiorentini, Richard J. Herrington, John Spratt

All Faculty Scholarship for the College of the Sciences

Modern seafloor hydrothermal systems provide important insights into the formation and discovery of ancient volcanic-hosted massive sulfide (VHMS) deposits. In 2010, Integrated Ocean Drilling Program (IODP) Expedition 331 drilled five sites in the Iheya North hydrothermal field in the middle Okinawa Trough back-arc basin, Japan. Hydrothermal alteration and sulfide mineralization is hosted in a geologically complex, mixed sequence of coarse pumiceous volcaniclastic and fine hemipelagic sediments, overlying a dacitic to rhyolitic volcanic substrate. At site C0016, located adjacent to the foot of the actively venting North Big Chimney massive sulfide mound, massive sphalerite-(pyrite-chalcopyrite ± galena)-rich sulfides were intersected (to 30.2% …

Groundwater And Tidal Controls On Wetland Hydrology, Julie J. Metz Wetland Mitigation Bank, Woodbridge, Virginia, Benjamin Stuart Hiza

OES Theses and Dissertations

Julie J. Metz Wetlands Mitigation Bank, a 92-hectare freshwater wetland located in Woodbridge, Virginia, borders the tidally-influenced Neabsco Creek. Seven pods separated by earthen berms were built by Wetland Studies and Solutions Inc. (WSSI) in 1995 and 1997 by removing the toe of small sandy alluvial fans and covering the underlying coarse gravel bed with a low permeability cap. The basal Quaternary gravels were deposited in a creek valley incised into a thick sand-and-clay Cretaceous delta. The alluvial-fan apron developed at the base of steep slopes along the sides of the valley. Pressure transducer data from five monitoring wells along …

Tourism In Raja Ampat: New Chances And Challenges, Chloe King

Independent Study Project (ISP) Collection

This study focuses on the ways in which the tourism industry in Raja Ampat has contributed to local livelihoods and encouraged the preservation of marine resources, looking specifically at the case of a dive operator and a volunteer tourism operation. The study illuminates the challenges that these operators face when engaging with the local community to protect the environment, and recommends more effective strategies for improving relations between tourism operators and the communities in which they reside. The study ultimately makes the case that the legacy of colonial rule in Western Papua must be a consideration in tourism planning, as …

Dollars From The Sea: Jacksonville And The Ocean Business, Committee Of 100 Jacksonville Area Chamber Of Commerce

City and Regional Planning -- Florida

Book details Jacksonville's oceanographic history 1967-1974

Cruise Data For Neuston Net And Paired Bongo Net Tows From 48 Stations In The Northern Gulf Of Mexico From R/V Blazing Seven Cruises Lf2016a And Lf2016b, June-July 2016, Jay R. Rooker, R.J. David Wells

DEEPEND Datasets

Shelf and slope waters in the Deep Water Horizon oil spill (DWHOS) area are known to serve as critical spawning, nursery, and foraging habitat of several important oceanic species including billfishes (e.g. blue marlin, white marlin, sailfish), tunas (bluefin tuna, yellowfin tuna), and other pelagic taxa (swordfish, dolphinfishes). The aim of this component was to further investigate potential ecological effects of the DWHOS on pelagic fishes during the early life period. Larval fishes were sampled from 48 stations in the northern Gulf of Mexico and cruise data was collected at each site including latitude/longitude, date, time and environmental data (sea …

Presence/Absence And Density Data For Epipelagic Tows From 48 Stations In The Northern Gulf Of Mexico From R/V Blazing Seven Cruises Lf2015a And Lf2015b June 2015 And July 2015, Jay R. Rooker, R.J. David Wells

DEEPEND Datasets

Larval catch data after the oil spill is being used to improve our understanding of the causes of temporal variability as it relates to the Deep Water Horizon oil spill (DWHOS). Bongo and neuston net tows were conducted at 48 stations in both June and July, 2015 in the northern Gulf of Mexico. Cruise data collected at each site included latitude/longitude, date, time and environmental data (temperature, salinity, dissolved oxygen). The occurrence and density of selected epipelagic (e.g., billfishes, tunas, dolphinfishes, flyingfishes) and deep pelagic (e.g., lanternfishes, bristlemouths, marine hatchetfishes) fish larvae were quantified and are being used to extend …

Latitudinal Position And Trends Of The Intertropical Convergence Zone (Itcz) And Its Relationship With Upwelling In The Southern Caribbean Sea And Global Climate Indices, Kaitlyn E. Colna

USF Tampa Graduate Theses and Dissertations

The Intertropical Convergence Zone (ITCZ) is a feature that results from the ocean-atmosphere interactions in the tropics around the world. The ITCZ is characterized by surface wind convergence, tall storm clouds, and it forms a belt of high time-averaged precipitation around the globe. The ITCZ undergoes seasonal migrations between 5°S and 15°N roughly following the subsolar point on Earth with the seasons, with a mean annual position located slightly above the Equator, between 2° and 5°N.

This study tested the hypothesis that there was a northward shift in the median position of the ITCZ in the first decade of the …

Southern Ocean Transport By Combining Satellite Altimetry And Temperature/Salinity Profile Data, Michael Kosempa

USF Tampa Graduate Theses and Dissertations

Zonal geostrophic velocity fields above 1975 dbar have been estimated for the Southern Ocean from 2004 to 2014 based on sea surface topography observed by Jason altimetry and temperature/salinity measured by Argo autonomous floats. The velocity at 1000 dbar estimated has been validated against Argo drift trajectory at the same pressure level available from the Asia Pacific Data Research Center (APDRC). Errors in mapping of dynamic ocean topography, temperature, and salinity have been quantified using the Southern Ocean State Estimate (SOSE). Analysis of errors reveals significant correlations between depth-dependent and –independent contributions to the integrated transport. Further analysis revealed optimal …

Climate Change Impacts On Southern Ross Sea Phytoplankton Composition, Productivity, And Export, Daniel E. Kaufman, Marjorie A. M. Friedrichs, Walker O. Smith Jr., Eileen E. Hofmann, Michael S. Dinniman, John C. P. Hemmings

CCPO Publications

The Ross Sea, a highly productive region of the Southern Ocean, is expected to experience warming during the next century along with reduced summer sea ice concentrations and shallower mixed layers. This study investigates how these climatic changes may alter phytoplankton assemblage composition, primary productivity, and export. Glider measurements are used to force a one-dimensional biogeochemical model, which includes diatoms and both solitary and colonial forms of Phaeocystis antarctica. Model performance is evaluated with glider observations, and experiments are conducted using projections of physical drivers for mid-21st and late-21st century. These scenarios reveal a 5% increase in primary productivity …

Impacts Of Oil Spills On Altimeter Waveforms And Radar Backscatter Cross Section, Yongcun Cheng, Jean Tournadre, Xiaofeng Li, Qing Xu, Bertrand Chapron

CCPO Publications

Ocean surface films can damp short capillary-gravity waves, reduce the surface mean square slope, and induce "sigma0 blooms" in satellite altimeter data. No study has ascertained the effect of such film on altimeter measurements due to lack of film data. The availability of Environmental Response Management Application (ERMA) oil cover, daily oil spill extent, and thickness data acquired during the Deepwater Horizon (DWH) oil spill accident provides a unique opportunity to evaluate the impact of surface film on altimeter data. In this study, the Jason-1/2 passes nearest to the DWH platform are analyzed to understand the waveform distortion caused by …