Oceanography Commons^™

Ecological Assessment Of Drainage Water Input On The Water Quality Of A Coastal Estuary, Mediterranean Coast Of Egypt, Fatma A. Zaghloul, Hoda A. E. Hemaida, Hayat M. Faragallah, Ahmed A. Radwan

Blue Economy

El Mex Bay, located west of Alexandria City, is identified as a hot spot of pollution along the Mediterranean coast of Egypt. It is a large, shallow, and turbid water body of socioeconomic importance. However, El Mex Bay receives a large amount of untreated industrial wastewater, as well as agricultural runoff from different land-based sources.

A comprehensive environmental study was carried out seasonally during 2020-2021. To evaluate the effect of this discharged wastewater on the water quality of El Mex Bay.

The physicochemical parameters were measured at both the surface and near-bottom water at nine stations.

Principal component analysis indicated …

Fluid Flow, Mineralization And Deformation In An Oceanic Detachment Fault: Microtextural, Geochemical And Isotopic Evidence From Pyrite At 13°30′N On The Mid-Atlantic Ridge, Andrew J. Martin, John W. Jamieson, Sven Petersen, Mostafa Fayek, Javier Escartin

Geoscience Faculty Research

Hydrothermal fluids in ultramafic-hosted hydrothermal systems associated with oceanic detachment faults can be more oxidizing compared to mafic-hosted vent sites. These fluids form a mineral assemblage of pyrite, magnetite and hematite. At 13°30′N on the Mid-Atlantic Ridge, chlorite-quartz breccias recovered from an exposed fault scarp contain pyrite, with abundant magnetite and hematite, indicating that the redox of the fluids was variable. In primary micron-scale zonations in pyrite, Ni, Co, and Se have a decoupled relationship, recording fluctuations in the chemical composition and temperature of hydrothermal fluid as the grains grew. Secondary zonations that erase and overprint primary zonations are limited …

Multimodel Approach To A Support Stock Assessment Of Standardized Catch And Effort Data: A Case Study Of Blue Shark (Prionace Glauca) In The Indian Ocean By The Taiwanese Large-Scale Longline Fishery, Chun-Yi Hung, Hoang Huy Huynh, Xing-Han Wu, Wen-Pei Tsai

Journal of Marine Science and Technology–Taiwan

In the context of stock assessment and fishery conservation, determining catch per unit effort (CPUE) accurately and reliably is essential. This study estimated trends in the relative abundance of blue sharks (Prionace glauca) in the Indian Ocean from 2005 to 2022. Blue sharks constitute a resilient bycatch species in pelagic tuna and swordfish longline fisheries. We employed a multimodel approach that included delta-lognormal, zero-inflated negative binomial, and vector autoregressive spatiotemporal (VAST) models to standardize catch rates recorded by observers in the Taiwanese large-scale longline fishery. Our analysis concentrated on the CPUE of blue sharks, including standardizing the number of fish …

Region-Specific Drivers Cause Low Organic Carbon Stocks And Sequestration Rates In The Saltmarsh Soils Of Southern Scandinavia, Carmen Leiva-Dueñas, Anna E. L. Graversen, Gary T. Banta, Jeppe N. Hansen, Marie L. K. Schrøter, Pere Masqué, Marianne Holmer, Dorte Krause-Jensen

Research outputs 2022 to 2026

Saltmarshes are known for their ability to act as effective sinks of organic carbon (OC) and their protection and restoration could potentially slow down the pace of global warming. However, regional estimates of saltmarsh OC storage are often missing, including for the Nordic region. To address this knowledge gap, we assessed OC storage and accumulation rates in 17 saltmarshes distributed along the Danish coasts and investigated the main drivers of soil OC storage. Danish saltmarshes store a median of 10 kg OC m−2 (interquartile range, IQR: 13.5–7.6) in the top meter and sequester 31.5 g OC m−2 yr−1 (IQR: 41.6–15.7). …

A Comparison Of Adenosine Triphosphate With Other Metrics Of Microbial Biomass In A Gradient From The North Atlantic To The Chesapeake Bay, Alexander B. Bochdansky, Amber A. Beecher, Joshua R. Calderon, Alison N. Stouffer, Nyjaee N. Washington

OES Faculty Publications

A new, simplified protocol for determining particulate adenosine triphosphate (ATP) levels allows for the assessment of microbial biomass distribution in aquatic systems at a high temporal and spatial resolution. A comparison of ATP data with related variables, such as particulate carbon, nitrogen, chlorophyll, and turbidity in pelagic samples, yielded significant and strong correlations in a gradient from the tributaries of the Chesapeake Bay (sigma-t = 8) to the open North Atlantic (sigma-t = 29). Correlations varied between ATP and biomass depending on the microscopic method employed. Despite the much greater effort involved, biomass determined by microscopy correlated poorly with other …

Re-Evaluating Hydrogen Sulfide As A Sink For Cadmium And Zinc In The Oxic To Suboxic Upper Water Column Of The Pacific Ocean, N. R. Buckley, E. E. Black, J. A. Kenyon, N. T. Lanning, M. Sieber, T. M. Conway, J. N. Fitzsimmons, G. A. Cutter

OES Faculty Publications

Hydrogen sulfide is produced by heterotrophic bacteria in anoxic waters and via carbonyl sulfide hydrolysis and phytoplankton emissions under oxic conditions. Apparent losses of dissolved cadmium (dCd) and zinc (dZn) in oxygen minimum zones (OMZs) of the Atlantic and Pacific Oceans have been attributed to metal-sulfide precipitation formed via dissimilatory sulfate reduction. It has also been argued that such a removal process could be a globally important sink for dCd and dZn. However, our studies from the North Pacific OMZ show that dissolved and particulate sulfide concentrations are insufficient to support the removal of dCd via precipitation. In contrast, apparent …

A Model For Community-Driven Development Of Best Practices: The Ocean Observatories Initiative Biogeochemical Sensors Data Best Practices And User Guide, Hilary I. Palevsky, Sophie Clayton, Heather Benway, Mairead Maheigan, Dariia Atamanchuk, Roman Battisi, Jennifer Batryn, Annie Bourbonnais, Ellen M. Briggs, Filipa Carvalho, Alison P. Chase, Rachel Eveleth, Rob Fatland, Kristen E. Fogaren, Jonathan Peter Fram, Susan E. Hartman, Isabela Le Bras, Cara C. M. Manning, Joseph A. Needoba, Merrie Beth Neely, Hilde Oliver, Andrew C. Reed, Jennie E. Rheuban, Christina Schallenberg, Ian Walsh, Christopher Wingard, Kohen Bauer, Baoshen Chen, Jose Cuevas, Susana Flecha, Micah Horwith, Melissa Melendez, Tyler Menz, Sara Rivero-Calle, Nicholas P. Roden, Tobias Steinhoff, Paulo Nicolás Trucco-Pignata, Michael F. Vardaro, Meg Yoder

OES Faculty Publications

The field of oceanography is transitioning from data-poor to data-rich, thanks in part to increased deployment of in-situ platforms and sensors, such as those that instrument the US-funded Ocean Observatories Initiative (OOI). However, generating science-ready data products from these sensors, particularly those making biogeochemical measurements, often requires extensive end-user calibration and validation procedures, which can present a significant barrier. Openly available community-developed and -vetted Best Practices contribute to overcoming such barriers, but collaboratively developing user-friendly Best Practices can be challenging. Here we describe the process undertaken by the NSF-funded OOI Biogeochemical Sensor Data Working Group to develop Best Practices for …

Intercalibration: A Cornerstone Of The Success Of The Geotraces Program, Ana Aguilar-Islas, Hélène Planquette, Maeve C. Lohan, Walter Geibert, Gregory Cutter

OES Faculty Publications

The international GEOTRACES program was developed to enhance knowledge about the distribution of trace elements and their isotopes (TEIs) in the ocean and to reduce the uncertainty about their sources, sinks, and internal cycling. Recognizing the importance of intercalibration from the outset, GEOTRACES implemented intercalibration efforts early in the program, and consensus materials were generated that included the full range of TEIs dissolved in seawater, in suspended particles, and from aerosols. The GEOTRACES section cruises include “crossover station(s)” that are occupied by two or more sections and whereby all aspects of sample collection, preservation, and processing can be compared and …

Nitrogen Fixation At The Mid-Atlantic Bight Shelfbreak And Transport Of Newly Fixed Nitrogen To The Slope Sea, C. R. Selden, M. R. Mulholland, K. E. Crider, S. Clayton, A. Macías-Tapia, P. Bernhardt, D. J. Mcgillicuddy Jr., W. G. Zhang, P. D. Chappell

OES Faculty Publications

Continental shelves contribute a large fraction of the ocean's new nitrogen (N) via N₂ fixation; yet, we know little about how physical processes at the ocean's margins shape diazotroph biogeography and activity. Here, we test the hypothesis that frontal mixing favors N₂ fixation at the Mid-Atlantic Bight shelfbreak. Using the ¹⁵N₂ bubble release method, we measured N₂ fixation rates on repeat cross-frontal transects in July 2019. N₂ fixation rates in shelf waters (median = 5.42 nmol N L⁻¹ d⁻¹) were higher than offshore (2.48 nmol N L⁻¹ d⁻¹) …

Nitrogen Uptake Rates And Phytoplankton Composition Across Contrasting North Atlantic Ocean Coastal Regimes North And South Of Cape Hatteras, Yifan Zhu, Margaret R. Mulholland, Peter W. Bernhardt, Aimee Renee Neeley, Brittany Widner, Alfonso Macías Tapia, Michael E. Echevarria

OES Faculty Publications

Understanding nitrogen (N) uptake rates respect to nutrient availability and the biogeography of phytoplankton communities is crucial for untangling the complexities of marine ecosystems and the physical, biological, and chemical forces shaping them. In the summer of 2016, we conducted measurements of bulk microbial uptake rates for six ¹⁵N-labeled substrates: nitrate, nitrite, ammonium, urea, cyanate, and dissolve free amino acids across distinct marine provinces, including the continental shelf of the Mid-and South Atlantic Bights (MAB and SAB), the Slope Sea, and the Gulf Stream, marking the first instance of simultaneously measuring six different N uptake rates in this dynamic region. …

Integrating Climatological-Hydrodynamic Modeling And Paleohurricane Records To Assess Storm Surge Risk, Amirhosein Begmohammadi, Christine Y. Blackshaw, Ning Lin, Avantika Gori, Elizabeth Wallace, Kerry Emanuel, Jeffrey P. Donnelly

OES Faculty Publications

Sediment cores from blue holes have emerged as a promising tool for extending the record of long-term tropical cyclone (TC) activity. However, interpreting this archive is challenging because storm surge depends on many parameters including TC intensity, track, and size. In this study, we use climatological-hydrodynamic modeling to interpret paleohurricane sediment records between 1851 and 2016 and assess the storm surge risk for Long Island in The Bahamas. As the historical TC data from 1988 to 2016 is too limited to estimate the surge risk for this area, we use historical event attribution in paleorecords paired with synthetic storm modeling …

Diel Vertical Migration Rates Of The Dinoflagellate Species Margalefidinium Polykrikoides In A Lower Chesapeake Bay Tributary, S. Clayton, Jacqueline B. Chrabot, Michael Echevarria, Leah Gibala-Smith, Kathryn Mogatas, Peter Bernhardt, Margaret R. Mulholland

OES Faculty Publications

Margalefidinium polykrikoides is a mixotrophic dinoflagellate harmful algal bloom (HAB) species that blooms annually in the lower Chesapeake Bay. M. polykrikoides undertakes a diel vertical migration (DVM) which may give it a competitive advantage over purely phototrophic organisms who cannot access deeper nutrient pools and allow it to form large toxic blooms. Laboratory-based estimates of M. polykrikoides’ DVM rates suggest that it is one of the fastest known dinoflagellate swimmers and understanding this behavior is likely important for modeling and predicting M. polykrikoides blooms. However, to date, no field-derived estimates of M. polykrikoides’ DVM rates have been made in the …

A Proxy System Modeling Approach To Combining Tree-Ring And Sediment-Based Paleotempestological Records, Elizabeth J. Wallace, Sylvia Dee, Joshua Bregy, Kerry A. Emanuel

OES Faculty Publications

The short and biased observational record of tropical cyclones (TCs) limits scientific understanding of how these destructive storms respond to climate forcing. Paleohurricane records use natural archives (tree rings, coarse-grained sediment) to reconstruct TC properties (frequency and intensity of rainfall, wind) over the past few hundreds to thousands of years. However, different sensitivities and sampling biases in the various paleohurricane proxies restrict our ability to compile these records into regional or basin-scale TC estimates. Here we test how well pseudo tree-ring records of paleohurricanes capture TC rainfall and occurrence. Using a large set of statistically downscaled storms forced with the …

Submarine Groundwater Discharge At A Mega-Tidal Beach, Raymond D. Craddock, Aaron A. Mohammed, Joseph J. Tamborski, Barret L. Kurylyk

OES Faculty Publications

Tidally influenced groundwater systems in coastal environments represent important mixing zones of fresh groundwater and circulating seawater, manifesting as submarine groundwater discharge (SGD). Water circulation induced by tidal pumping enhances the exchange of chemicals between aquifers and coastal waters and thereby influences the biogeochemistry of coastal zones. Here, we report the results of an SGD field study conducted at a steep, mega-tidal sand and gravel beach along the Canadian coast of the Bay of Fundy, a region with the world's highest tides (semi-diurnal tidal ranges exceeding 10 m). Several physical and geochemical measurement techniques were employed to document the spatiotemporal …

Contrasting Nitrogen Dynamics Across The Mid-Atlantic Bight Shelfbreak Front: Insights From Nitrate Dual Isotopes And Nitrifier Gene Abundance, Yifan Zhu, Margaret R. Mulholland, Corday R. Selden, Dennis J. Mcgillicuddy Jr., Josie Mottram, P. Dreux Chappell, Weifang Gordon Zhang, Julie Granger, Katherine E. Crider, Meredith G. Meyer, Peter W. Bernhardt, Hilde Oliver, Sophie Clayton

OES Faculty Publications

Observations and model studies suggest that front dynamics can enhance phytoplankton productivity. This study tested whether frontal systems also increase the abundance of nitrifying microbes and nitrogen recycling during repeat sampling transects across the Mid‐Atlantic Bight shelfbreak in July 2019. We measured ammonium concentrations, nitrate dual isotopes (δ¹⁵N, δ¹⁸O), and ammonia monooxygenase subunit A (amoA) genes of ammonia‐oxidizing archaea (AOA) and bacteria (AOB). In subsurface shelf waters, ammonium concentrations exceeded 2 μmol L⁻¹, due to a temporary imbalance in regeneration from sinking particles and subsequent nitrification. The inverse correlation between nitrate δ^{15 …}

Marine Emissions Of Methanethiol Increase Aerosol Cooling In The Southern Ocean, Charel Wohl, Julián Villamayor, Martí Galí, Anoop S. Mahajan, Rafael P. Fernández, Carlos A. Cuevas, Adriana Bossolasco, Qinyi Li, Anthony J. Kettle, Tara Williams, Roland Sarda-Esteve, Valérie Gros, Rafel Simó, Alfonso Saiz-Lopez

OES Faculty Publications

Ocean-emitted dimethyl sulfide (DMS) is a major source of climate-cooling aerosols. However, most of the marine biogenic sulfur cycling is not routed to DMS but to methanethiol (MeSH), another volatile whose reactivity has hitherto hampered measurements. Therefore, the global emissions and climate impact of MeSH remain unexplored. We compiled a database of seawater MeSH concentrations, identified their statistical predictors, and produced monthly fields of global marine MeSH emissions adding to DMS emissions. Implemented into a global chemistry-climate model, MeSH emissions increase the sulfate aerosol burden by 30 to 70% over the Southern Ocean and enhance the aerosol cooling effect while …

Submarine Groundwater Discharge As A Major Nutrient Source In River-Fed Vs. Tidally Dominated Estuaries, Stephanie J. Wilson, Joseph J. Tamborski, Bongkeun Song, Peter Bernhardt, Margaret R. Mulholland

OES Faculty Publications

The tidal tributaries of the lower Chesapeake Bay experience seasonally recurring harmful algal blooms and the significance of submarine groundwater discharge (SGD) as a nutrient vector is largely unknown. Here, we determined seasonal SGD nutrient loads in two tributaries with contrasting hydrodynamic conditions, river-fed (York River) vs. tidally dominated (Lafayette River). Radon surveys were performed in each river to quantify SGD at the embayment-scale during spring and fall 2021. Total SGD was determined from a ²²²Rn mass balance and Monte Carlo simulations. Submarine groundwater discharge rates differed by a factor of two during spring (Lafayette = 11 ± 17 cm …

Supply And Consumption Of Dissolved Organic Phosphorus Across The Subtropical Indian Ocean, Corinne Richard

Honors Theses and Capstones

The Indian Ocean is an understudied region for marine phosphorus (P) biogeochemistry. Emerging evidence indicates marine phytoplankton can adapt to decreasing supplies of inorganic P, a required nutrient for growth, by alternatively utilizing organic forms of P. Here we investigate the dissolved organic phosphorus concentration ([DOP]) distribution across the southern Indian Ocean using observations collected on the I05 US GO-SHIP Cruise (2023) across ~33ºS latitude. We quantify the longitudinal variability of [DOP] in the upper 350 m of the Indian Ocean and infer its rate of biological consumption from surface waters, contributing as an organic nutrient to sustain marine autotrophs …

Observations Of Lateral Salinity Variability At A Deltaic-Bay Transition Zone, Mobile Bay, Alabama, Clara Oxford, Brian Dzwonkowski, Josh Goff

Gulf and Caribbean Research

No abstract provided.

Delayed Coastal Inundations Caused By Ocean Dynamics Post-Hurricane Matthew, Kyungmin Park, Emanuele Di Lorenzo, Yinglong J. Zhang, Tal Ezer, Fei Yi

CCPO Publications

Post Hurricane Abnormal Water Level (PHAWL) poses a persistent inundation threat to coastal communities, yet unresolved knowledge gaps exist regarding its spatiotemporal impacts and causal mechanisms. Using a high-resolution coastal model with a set of observations, we find that the PHAWLs are up to 50 cm higher than the normal water levels for several weeks and cause delayed inundations around residential areas of the U.S. Southeast Coast (USSC). Numerical experiments reveal that while atmospheric forcing modulates the coastal PHAWLs, ocean dynamics primarily driven by the Gulf Stream control the mean component and duration of the shelf-scale PHAWLs. Because of the …