Terrestrial and Aquatic Ecology Commons^™

Fisheries Science Update – October 2021: West Coast Demersal Scalefish Resource, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Occasional Publications

Key points: 2021 stock assessment outcomes • The West Coast Demersal Scalefish Resource (WCDSR) is halfway into a 20-year recovery plan following a period of overfishing in the 1990s and 2000s. • This latest assessment provides an important “health check” on the recovery status. • The recovery plan is based on maintaining recreational (including charter) and commercial sector’s total fishing mortality below catch limits and protecting key spawning aggregations to recover the WCDSR by 2030. • The Department of Primary Industries and Regional Development (DPIRD) tracks recovery progress by undertaking weight of evidence stock assessments of WCDSR indicator species dhufish …

Free-Ranging And Feral Cats, Alex Dutcher, Kyle Pias, Grant Sizemore, Stephen M. Vantassel

Wildlife Damage Management Technical Series

Domestic cats (Felis catus) are a common household pet in the United States, with an estimated 25.4% of households owning cats (American Veterinary Medical Association 2018). While an increasing number of cat owners keep their pet cats exclusively indoors, a portion of society maintains that domestic cats are entitled to a free-ranging lifestyle and may even consider unowned domestic cats to be wildlife. Although wildlife managers recognize the beliefs of many concerned stakeholders, including advocates who use strong emotional appeals on behalf of cats, it remains that free-ranging and feral domestic cats are an invasive species spread by humans (Lowe …

Remote Detection Of Disturbance From Motorized Vehicle Use In Appalachian Wetlands, Walter Smith

Virginia Journal of Science

Wetland disturbance from motorized vehicle use is a growing concern across the Appalachian coalfields of southwestern Virginia and portions of adjacent states, particularly as both extractive industries and outdoor recreation development expand in regional communities. However, few attempts have been made in this region or elsewhere to adapt approaches that can assist researchers and land managers in remotely identifying and monitoring wetland habitats disturbed by motorized vehicle use. A comparative analysis of wetlands impacted and unimpacted by off-road vehicle activity at a public recreation area in Tazewell County, Virginia was conducted to determine if and how a common, satellite-derived index …

An Opportunistic Survey Reveals An Unexpected Coronavirus Diversity Hotspot In North America, Hon S. Ip, Kathryn M. Griffin, Jeffrey D. Messer, Megan E. Winzeler, Susan A. Shriner, Mary Lea Killian, Mia Kim Torchetti, Thomas J. Deliberto, Brian R. Amman, Caitlin M. Cossaboom, R. Reid Harvey, Natalie M. Wendling, Hannah Rettler, Dean Taylor, Jonathan S. Towner, Casey Barton Behravesh, David S. Blehert

United States Department of Agriculture Wildlife Services: Staff Publications

In summer 2020, Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) was detected on mink farms in Utah. An interagency One Health response was initiated to assess the extent of the outbreak and included sampling animals from on or near affected mink farms and testing them for SARS-CoV-2 and non-SARS coronaviruses. Among the 365 animals sampled, including domestic cats, mink, rodents, raccoons, and skunks, 261 (72%) of the animals harbored at least one coronavirus. Among the samples that could be further characterized, 127 alphacoronaviruses and 88 betacoronaviruses (including 74 detections of SARS-CoV-2 in mink) were identified. Moreover, at least 10% (n …

Variations, Validations, Degradations, And Noninvasive Determination Of Pregnancy Using Fecal Steroid Metabolites In Free-Ranging Pronghorn, Cole A. Bleke, Eric M. Gese, Susannah S. French

United States Department of Agriculture Wildlife Services: Staff Publications

Pregnancy status is a key parameter used to assess reproductive performance of a species as it represents a starting point for measuring vital rates. Vital rates allow managers to determine trends in populations such as neonate survival and recruitment; two important factors in ungulate population growth rates. Techniques to determine pregnancy have generally involved capture and restraint of the animal to obtain blood samples for determining serum hormone levels. Non-invasive pregnancy assessment, via feces, eliminates any hazards between handler and animal, as well as removes handling-induced physiological biases. Using noninvasive fecal sampling, we conducted hormone validations, investigated pregnancy rates, and …

Cytoarchitectural Characteristics Associated With Cognitive Flexibility In Raccoons, Joanna Jacob, Molly Kent, Sarah Benson-Amram, Suzana Herculano-Houzel, Mary Ann Raghanti, Emily Ploppert, Jack Drake, Bilal Hindi, Nick R. Natale, Sarah Daniels, Rachel Fanelli, Anderson Miller, Tim Landis, Amy Gilbert, Shylo Johnson, Annie Lai, Molly Hyer, Amanda Rzucidlo, Chris Anchor, Stan Gehrt, Kelly Lambert

United States Department of Agriculture Wildlife Services: Staff Publications

With rates of psychiatric illnesses such as depression continuing to rise, additional preclinical models are needed to facilitate translational neuroscience research. In the current study, the raccoon (Procyon lotor) was investigated due to its similarities with primate brains, including comparable proportional neuronal densities, cortical magnification of the forepaw area, and cortical gyrification. Specifically, we report on the cytoarchitectural characteristics of raccoons profiled as high, intermediate, or low solvers in a multiaccess problem-solving task. Isotropic fractionation indicated that high-solvers had significantly more cells in the hippocampus (HC) than the other solving groups; further, a nonsignificant trend suggested that this …

Satellite-Detected Ammonia Changes In The United States: Natural Or Anthropogenic Impacts, Yaqian He, Rongting Xu, Stephen A. Prior, Di Yang, Anni Yang, Jian Chen

United States Department of Agriculture Wildlife Services: Staff Publications

Ammonia (NH3) is the most abundant alkaline component and can react with atmospheric acidic species to form aerosols that can lead to numerous environmental and health issues. Increasing atmospheric NH3 over agricultural regions in the US has been documented. However, spatiotemporal changes of NH3 concentrations over the entire US are still not thoroughly understood, and the factors that drive these changes remain unknown. Herein, we applied the Atmospheric Infrared Sounder (AIRS) monthly NH3 dataset to explore spatiotemporal changes in atmospheric NH3 and the empirical relationships with synthetic N fertilizer application, livestock manure production, and climate factors across the entire US …

Adaptation Of An Artificial Bait To An Automated Aerial Delivery System For Landscape-Scale Brown Treesnake Suppression, Rafael A. Garcia, Thomas W. Mcauliffe, Lorelie P. Bumanlag, Shane R. Siers, Bruce A. Kimball

United States Department of Agriculture Wildlife Services: Staff Publications

Dead neonatal mice are currently used as bait for delivery of toxin to invasive brown treesnakes (Boiga irregularis) on Guam; once deployed in the field the mice are highly attractive to the snakes but only for about four days. An artificial bait containing a mixture of fats mimicking those in skin of the mice is also highly attractive to the snakes and remains attractive 2–3 times longer. The artificial bait, however, costs more than the mice, and is more difficult to attach to the capsules of a novel aerial bait delivery system. This paper describes a reformulation of the bait …

Movement, Space-Use And Resource Preferences Of European Golden Jackals In Human-Dominated Landscapes: Insights From A Telemetry Study, Skye Fenton, Paul R. Moorcroft, Duško Ćirović, József Lanszki, Miklós Heltai, Francesca Cagnacci, Stewart Breck, Neda Bogdanović, Ilija Pantelić, Kornél Ács, Nathan Ranc

United States Department of Agriculture Wildlife Services: Staff Publications

During the last half-century, the distribution of golden jackals (Canis aureus) has rapidly increased throughout Europe. Today, golden jackals are thriving in human-dominated landscapes across Southeastern and Central Europe. Most studies on golden jackals have focused on large-scale distribution patterns; to date, little is known about the species’ fine-scale spatial ecology. In this study, we analyzed the movement behavior, space-use and resource selection of six golden jackals fitted with GPS-GSM collars in two study areas in Hungary and Serbia. Two of the jackals were a breeding pair. We found that home range size averaged 11.2 km² (90% …

Effects Of Translocation On Survival Of Nuisance Bears, Javan Bauder, D. Ruid, N. M. Roberts, B. Kohn, M. L. Allen

United States Department of Agriculture Wildlife Services: Staff Publications

Effective mitigation of human–wildlife conflict should aim to reduce conflicts while also minimizing wildlife mortality. Translocation is often used to mitigate human–wildlife conflict but translocated individuals may have reduced survival, which could negatively affect population growth and social acceptance of translocation as a management tool. Yet, non-translocated nuisance individuals may also have low survival due to inherent risks associated with nuisance behavior. We used a 38-year dataset of 1233 marked and translocated nuisance American black bears (Ursus americanus) as a model system with which to evaluate the impacts of translocation on nuisance bear survival. We used multi-state mark-recapture models to …

Threading The Needle: How Humans Influence Predator–Prey Spatiotemporal Interactions In A Multiple-Predator System, Asia Murphy, Duane R. Diefenbach, Mark Ternent, Matt Lovallo, David Miller

United States Department of Agriculture Wildlife Services: Staff Publications

Perceived predation risk and the resulting antipredator behaviour varies across space, time and predator identity. Communities with multiple predators that interact and differ in their use of space, time of activity and hunting mode create a complex landscape for prey to avoid predation. Anthropogenic presence and disturbance have the potential to shift interactions among predators and prey and the where and when encounters occur. We examined how white-tailed deer Odocoileus virginianus fawn spatiotemporal antipredator behaviour differed along an anthropogenic disturbance gradient that had black bears Ursus americanus, coyotes Canis latrans, bobcats Lynx rufus and humans present. We quantified (a) spatial …

Predictors Of Marine Genetic Structure In The Indo-Australian Archipelago, Udhi E. Hernawan, Paul S. Lavery, Gary A. Kendrick, Kor-Jent Van Dijk, Yaya I. Ulumuddin, Teddy Triandiza, Kathryn M. Mcmahon

Research outputs 2014 to 2021

The spatial genetic structure of marine organisms is related to dispersal and life-history traits, historical processes, current oceanographic connectivity and habitat features. Here, we assessed the relative importance of these factors for the genetic structure of a broad range of marine species in the Indo Australian Archipelago (IAA). We collated published data on 99 marine species from eight taxonomic groups (ascidians, fishes, molluscs, crustaceans, echinoderms, corals, reptiles, and marine plants) and used generalized linear models (GLMs) to estimate the best predictors of genetic structure. Genetic structure was characterized by FST and the number of genetic clusters over the study area. …

Kelp Morphology And Herbivory Are Maintained Across Latitude Despite Geographic Shift In Kelp-Wounding Herbivores, Nicholas P. Burnett, Eric J. Armstrong, Rosemary Romero, Charlotte C. Runzel, Richelle L. Tanner

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Herbivores can drastically alter the morphology of macroalgae by directly consuming tissue and by inflicting structural wounds. Wounds can result in large amounts of tissue breaking away from macroalgae, amplifying the damage initially caused by herbivores. Herbivores that commonly wound macroalgae often occur over only a portion of a macroalga’s lifespan or geographic range. However, we know little about the influence of these periodic or regional occurrences of herbivores on the large-scale seasonal and geographical patterns of macroalgal morphology. We used the intertidal kelp Egregia menziesii to investigate how the kelp’s morphology and the prevalence of two prominent kelp-wounding herbivores …

Blue Carbon In South Florida's Mangroves: The Role Of Large Roots And Necromass, Zoë I. Shribman

LSU Master's Theses

Blue carbon sequestration and storage in mangroves largely result from belowground biomass allocation in response to flooded anaerobic soil conditions and nutrient availability. Biomass allocation to belowground roots is a major driver of mangrove soil formation and organic matter accumulation leading to blue carbon storage potential. Belowground biomass sampling in mangroves is labor intensive, limiting data availability on biomass stocks, particularly for large roots (>20 mm diameter) and necromass (dead roots). The mangrove nutrient model (NUMAN) uses mostly literature values to parameterize a soil cohort approach to simulate depth distribution of root mass and organic carbon concentration. We evaluated …

Use Of Soapweed Yucca (Yucca Glauca) By Rodents And Other Vertebrates In Western Nebraska, Michael L. Rohde, Keith Geluso, Carter Kruse, Mary J. Harner

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Soapweed Yucca (Yucca glauca) is a conspicuous and common shrub in the Great Plains of North America, characterized by tall woody flower stalks, large flowers and seed pods, and dense masses of ground-level evergreen leaves. These plant structures can provide a variety of resources or functions to animals. In general, studies focus on single species associated with Y. glauca. We examined three groups of vertebrates that interacted with Y. glauca and the functions this plant provided for organisms in western Nebraska. We experimentally examined small mammals in areas with and without Y. glauca, and we descriptively …

Center For Grassland Studies, September 2021

Center for Grassland Studies: Newsletters

Contents

Nebraska Grazing Conference Recap by Daren Redfearn

Center for Grassland Studies Policy Advisory Committee

Director's Column by Walt Schacht (Interim Director)

Land Use and Property Taxes by Jordan Johnson

Congratulations August 2021 Graduates

Wildfires are Changing the Future of Nebraska’s Woodland-Grassland Complexes by Amanda Hefner

PGA WORKS Scholarship Recipients Announced by PGA Reach

Grazing Livestock Systems Internships Provide Diverse Experience by Bryan Reiling

Jim Choquette Receives Lifetime Achievement Award

Otoliths Of South-Western Australian Fish: A Photographic Catalogue, Chris Dowling, Kim Smith, Elaine Lek, Joshua Brown

Fisheries Research Reports

Due to the species-specific nature of otoliths and given they are often the only part of the fish preserved when fish die, otolith catalogues can be used in numerous applications, such as diet studies in fish eating animals, including pinnipeds, fish and sea birds; archaeological purposes such as reconstructing indigenous people’s diets from otoliths found in middens or evolutionary history of fish species by comparing fossilized otoliths. Given the unique mixture of subtropical and temperate fish, including many endemic species that occur off the southwest corner of WA having a catalogue for this area is extremely important for people working …

Scaup Depredation On Arkansas Baitfish And Sportfish Aquaculture, Stephen A. Clements, Brian S. Dorr, J. Brian Davis, Luke A. Roy, Carole R. Engle, Katie Hanson-Dorr, Anita M. Kelly

United States Department of Agriculture Wildlife Services: Staff Publications

Lesser scaup (Aythya affinis) and greater scaup (A. marila), hereafter scaup, consume a variety of aquatic invertebrates, plants, and occasionally small fish. Scaup have foraged on commercial aquaculture farms in the southern United States for decades. However, the types, abundance, and rate of fish exploitation by scaup on baitfish and sportfish farms are not well documented. Thus, information is needed to understand how fish and other foods influence scaup use of aquatic resources, and any potential economic effects of depredation of fish. From November–March in winters 2016–2017 and 2017–2018, we conducted 1,458 pond surveys to …

Improving Animal Monitoring Using Small Unmanned Aircraft Systems (Suas) And Deep Learning Networks, Meilun Zhou, Jared A. Elmore, Sathishkumar Samiappan, Kristine O. Evans, Morgan Pfeiffer, Bradley F. Blackwell, Raymond B. Iglay

United States Department of Agriculture Wildlife Services: Staff Publications

In recent years, small unmanned aircraft systems (sUAS) have been used widely to monitor animals because of their customizability, ease of operating, ability to access difficult to navigate places, and potential to minimize disturbance to animals. Automatic identification and classification of animals through images acquired using a sUAS may solve critical problems such as monitoring large areas with high vehicle traffic for animals to prevent collisions, such as animal-aircraft collisions on airports. In this research we demonstrate automated identification of four animal species using deep learning animal classification models trained on sUAS collected images. We used a sUAS mounted with …

Spatial Variation In Direct And Indirect Contact Rates At The Wildlife-Livestock Interface For Informing Disease Management, Anni Yang, Raoul K. Boughton, Ryan S. Miller, Bethany Wight, Wesley M. Anderson, James C. Beasley, Kurt C. Vercauteren, Kim M. Pepin, George Wittemyer

United States Department of Agriculture Wildlife Services: Staff Publications

Little is known about disease transmission relevant contact rates at the wildlife-livestock interface and the factors shaping them. Indirect contact via shared resources is thought to be important but remains unquantified in most systems, making it challenging to evaluate the impact of livestock management practices on contact networks. Free-ranging wild pigs (Sus scrofa) in North America are an invasive, socially-structured species with an expanding distribution that pose a threat to livestock health given their potential to transmit numerous livestock diseases, such as pseudorabies, brucellosis, trichinellosis, and echinococcosis, among many others. Our objective in this study was to quantify …