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Articles 11461 - 11490 of 14771
Full-Text Articles in Agricultural Science
Validation Of Qtl Mapping And Transcriptome Profiling For Identification Of Candidate Genes Associated With Nitrogen Stress Tolerance In Sorghum, Malleswari Gelli, Anji Reddy Konda, Kan Liu, Chi Zhang, Thomas E. Clemente, David R. Holding, Ismail M. Dweikat
Validation Of Qtl Mapping And Transcriptome Profiling For Identification Of Candidate Genes Associated With Nitrogen Stress Tolerance In Sorghum, Malleswari Gelli, Anji Reddy Konda, Kan Liu, Chi Zhang, Thomas E. Clemente, David R. Holding, Ismail M. Dweikat
Department of Agronomy and Horticulture: Faculty Publications
Background: Quantitative trait loci (QTLs) detected in one mapping population may not be detected in other mapping populations at all the time. Therefore, before being used for marker assisted breeding, QTLs need to be validated in different environments and/or genetic backgrounds to rule out statistical anomalies. In this regard, we mapped the QTLs controlling various agronomic traits in a recombinant inbred line (RIL) population in response to Nitrogen (N) stress and validated these with the reported QTLs in our earlier study to find the stable and consistent QTLs across populations. Also, with Illumina RNA-sequencing we checked the differential expression of …
Effects Of Post Eviction Resettlement On Land-Use And Cover Change In Uganda’S Oil Exploration Areas, Joseph Ssekandi, John Mburu, Oliver Wasonga, Laban Macopiyo, Charles A. Francis
Effects Of Post Eviction Resettlement On Land-Use And Cover Change In Uganda’S Oil Exploration Areas, Joseph Ssekandi, John Mburu, Oliver Wasonga, Laban Macopiyo, Charles A. Francis
Department of Agronomy and Horticulture: Faculty Publications
Evaluation of the changes in land use and land cover change (LULCC) in respect to oil exploration across the Albertine region in Uganda has been focused around the exploration areas and protected areas, with no attention to the potential impacts of evictees’ activities on resettled areas. This study used LANDSAT images to analyze the land use and land cover changes (LULCC) among the period before eviction (2002 and 2005) at the climax of eviction and resettlements (2005-2011), and during the post-resettlement period (2011-2015) to quantify the impacts of resettlements on the environment. LANDSAT images were processed using ERDAS IMAGINE software …
Effects Of Silvopasture Establishment On Aqueous And Gaseous Soil N Losses At The University Of New Hampshire Organic Dairy Research Farm, Kathryn Ann Slebodnik
Effects Of Silvopasture Establishment On Aqueous And Gaseous Soil N Losses At The University Of New Hampshire Organic Dairy Research Farm, Kathryn Ann Slebodnik
Honors Theses and Capstones
The expansion of local agriculture in the New England region is putting increased pressure on farmers to expand their arable land base. While clear-cutting is a traditional method of converting forested land to agriculture, it is known for having adverse ecological impacts. To minimize these impacts, farmers can create a silvopasture which incorporates a portion of the original forest canopy into pastures or crop fields. This study evaluates the impact of land-use changes for agriculture on soil nitrogen (N) retention. In particular, this study investigates the differences in soil N turnover, gaseous loss, and aqueous loss among an established forest, …
Drivers And Feedbacks Of The Fire-Grazing Interaction In The Northern Great Plains, Jacob E. Powell
Drivers And Feedbacks Of The Fire-Grazing Interaction In The Northern Great Plains, Jacob E. Powell
Graduate Student Theses, Dissertations, & Professional Papers
The fire-grazing interaction is well studied in mesic grasslands worldwide, but research is lacking in semiarid systems. In addition, the fire-grazing interaction reduces the invasion of exotic forage species in mesic grasslands by increasing the scale of grazing selection and may be a tool to control invasive plants in other grasslands. We examined the principal drivers and feedbacks of the fire-grazing interaction on the strength of cattle grazing selection, forage quantity and quality, and vegetation structure and composition in two pastures in northeast Montana at The Nature Conservancy’s Matador Ranch. We also determined the influence of time since fire, within …
Pollen-Mediated Gene Flow From Glyphosate-Resistant Common Waterhemp (Amaranthus Rudis Sauer): Consequences For The Dispersal Of Resistance Genes, Debalin Sarangi, Andrew J. Tyre, Eric L. Patterson, Todd A. Gaines, Suat Irmak, Stevan Z. Knezevic, John L. Lindquist, Amit J. Jhala
Pollen-Mediated Gene Flow From Glyphosate-Resistant Common Waterhemp (Amaranthus Rudis Sauer): Consequences For The Dispersal Of Resistance Genes, Debalin Sarangi, Andrew J. Tyre, Eric L. Patterson, Todd A. Gaines, Suat Irmak, Stevan Z. Knezevic, John L. Lindquist, Amit J. Jhala
Department of Agronomy and Horticulture: Faculty Publications
Gene flow is an important component in evolutionary biology; however, the role of gene flow in dispersal of herbicide-resistant alleles among weed populations is poorly understood. Field experiments were conducted at the University of Nebraska-Lincoln to quantify pollen-mediated gene flow (PMGF) from glyphosate-resistant (GR) to -susceptible (GS) common waterhemp using a concentric donorreceptor design. More than 130,000 common waterhemp plants were screened and 26,199 plants were confirmed resistant to glyphosate. Frequency of gene flow from all distances, directions, and years was estimated with a double exponential decay model using Generalized Nonlinear Model (package gnm) in R. PMGF declined by 50% …
Estimating Yield Gaps At The Cropping System Level, Nicolas Guilpart, Patricio Grassini, Victor O. Sadras, Jagadish Timsina, Kenneth Cassman
Estimating Yield Gaps At The Cropping System Level, Nicolas Guilpart, Patricio Grassini, Victor O. Sadras, Jagadish Timsina, Kenneth Cassman
Department of Agronomy and Horticulture: Faculty Publications
Yield gap analyses of individual crops have been used to estimate opportunities for increasing crop production at local to global scales, thus providing information crucial to food security. However, increases in crop production can also be achieved by improving cropping system yield through modification of spatial and temporal arrangement of individual crops. In this paper we define the cropping system yield potential as the output from the combination of crops that gives the highest energy yield per unit of land and time, and the cropping system yield gap as the difference between actual energy yield of an existing cropping system …
Modeling Pollen-Mediated Gene Flow From Glyphosate-Resistant To -Susceptible Giant Ragweed (Ambrosia Trifida L.) Under Field Conditions, Zahoor A. Ganie, Amit J. Jhala
Modeling Pollen-Mediated Gene Flow From Glyphosate-Resistant To -Susceptible Giant Ragweed (Ambrosia Trifida L.) Under Field Conditions, Zahoor A. Ganie, Amit J. Jhala
Department of Agronomy and Horticulture: Faculty Publications
A field experiment was conducted to quantify pollen mediated gene flow (PMGF) from glyphosateresistant (GR) to glyphosate-susceptible (GS) giant ragweed under simulated field conditions using glyphosate resistance as a selective marker. Field experiments were conducted in a concentric design with the GR giant ragweed pollen source planted in the center and GS giant ragweed pollen receptors surrounding the center in eight directional blocks at specified distances (between 0.1 and 35 m in cardinal and ordinal directions; and additional 50 m for ordinal directions). Seeds of GS giant ragweed were harvested from the pollen receptor blocks and a total of 100,938 …
Gene Silencing Of Argonaute5 Negatively Affects The Establishment Of The Legume-Rhizobia Symbiosis, Maria Del Rocio Reyero-Saavedra, Zhenzhen Qiao, Maria Del Socorro Sanchez-Correa, M. Enrique Diaz-Pineda, Jose L. Reyes, Alejandra A. Covarrubias, Marc Libault, Oswaldo Valdes-Lopez
Gene Silencing Of Argonaute5 Negatively Affects The Establishment Of The Legume-Rhizobia Symbiosis, Maria Del Rocio Reyero-Saavedra, Zhenzhen Qiao, Maria Del Socorro Sanchez-Correa, M. Enrique Diaz-Pineda, Jose L. Reyes, Alejandra A. Covarrubias, Marc Libault, Oswaldo Valdes-Lopez
Department of Agronomy and Horticulture: Faculty Publications
The establishment of the symbiosis between legumes and nitrogen-fixing rhizobia is finely regulated at the transcriptional, posttranscriptional and posttranslational levels. Argonaute5 (AGO5), a protein involved in RNA silencing, can bind both viral RNAs and microRNAs to control plant-microbe interactions and plant physiology. For instance, AGO5 regulates the systemic resistance of Arabidopsis against Potato Virus X as well as the pigmentation of soybean (Glycine max) seeds. Here, we show that AGO5 is also playing a central role in legume nodulation based on its preferential expression in common bean (Phaseolus vulgaris) and soybean roots and nodules. We also …
Chemical Interruption Of Late Season Flowering To Improve Harvested Peanut Maturity, Marshall C. Lamb, Ronald B. Sorensen, Christopher L. Butts, Phat M. Dang, C. Y. Chen, Renée S. Arias
Chemical Interruption Of Late Season Flowering To Improve Harvested Peanut Maturity, Marshall C. Lamb, Ronald B. Sorensen, Christopher L. Butts, Phat M. Dang, C. Y. Chen, Renée S. Arias
United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications
Peanut (Arachis hypogaea) is a botanically indeterminate plant where flowering, fruit initiation, and pod maturity occurs over an extended time period during the growing season. As a result, the maturity and size of individual peanut pods vary considerably at harvest. Immature kernels that meet commercial edible size specifications negatively affect quality during processing due to their increased propensity for off flavors, higher moisture and water activity, and variable roasting properties. As peanuts progress toward maturation, late season flowers set within 40 days till harvest will not have sufficient time to develop into mature, marketable pods prior to harvest. …
Characterization Of Small Rna Populations In Non-Transgenic Andaflatoxin-Reducing-Transformed Peanut, Imana L. Power, Phat M. Dang, Victor S. Sobolev, Valerie Orner, Joseph L. Powell, Marshall C. Lamb, Renée S. Arias
Characterization Of Small Rna Populations In Non-Transgenic Andaflatoxin-Reducing-Transformed Peanut, Imana L. Power, Phat M. Dang, Victor S. Sobolev, Valerie Orner, Joseph L. Powell, Marshall C. Lamb, Renée S. Arias
United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications
Aflatoxin contamination is a major constraint in food production worldwide. In peanut (Arachis hypogaea L.), these toxic and carcinogenic aflatoxins are mainly produced by Aspergillus flavus Link and A. parasiticus Speare. The use of RNA interference (RNAi) is a promising method to reduce or prevent the accumula-tion of aflatoxin in peanut seed. In this study, we performed high-throughput sequencing of small RNApopulations in a control line and in two transformed peanut lines that expressed an inverted repeattargeting five genes involved in the aflatoxin-biosynthesis pathway and that showed up to 100% less aflatoxin B1 than the controls. The objective was …
Assessment Of Canopy Chlorophyll Content Retrieval In Maize And Soybean: Implications Of Hysteresis On The Development Of Generic Algorithms, Yi Peng, Anthony L. Nguy-Robertson, Timothy J. Arkebauer, Anatoly A. Gitelson
Assessment Of Canopy Chlorophyll Content Retrieval In Maize And Soybean: Implications Of Hysteresis On The Development Of Generic Algorithms, Yi Peng, Anthony L. Nguy-Robertson, Timothy J. Arkebauer, Anatoly A. Gitelson
Department of Agronomy and Horticulture: Faculty Publications
Canopy chlorophyll content (Chl) closely relates to plant photosynthetic capacity, nitrogen status and productivity. The goal of this study is to develop remote sensing techniques for accurate estimation of canopy Chl during the entire growing season without re-parameterization of algorithms for two contrasting crop species, maize and soybean. These two crops represent different biochemical mechanisms of photosynthesis, leaf structure and canopy architecture. The relationships between canopy Chl and reflectance, collected at close range and resampled to bands of the Multi Spectral Instrument (MSI) aboard Sentinel-2, were analyzed in samples taken across the entirety of the growing seasons in three irrigated …
The Effects Of Early Pruning On The Near-Ground Branch Density Of Four Live Fencing Species, Aric Devens
The Effects Of Early Pruning On The Near-Ground Branch Density Of Four Live Fencing Species, Aric Devens
Dissertations, Master's Theses and Master's Reports
Crop losses in home gardens greatly impact the wellbeing of rural West African families. Herbivory by migratory or local livestock represents a significant source of crop loss. Live-fencing gardens with thorny hedges is a low-cost and sustainable strategy for reducing losses due to herbivory. However, guidance on the establishment of thorny hedges is inconsistent, poorly publicized, and often anecdotal. Therefore, this study evaluated the effects of three early pruning treatments on near-ground branch density of four thorny species: Vachellia nilotica, Senegalia laeta, Senegalia mellifera, and Prosopis juliflora. Physical measurements and photographic data indicated that after one growing season, V. …
The Influence Of Native Woody Species, Combretum Glutinosum And Piliostigma Reticulatum, On Soil Fertility In Dialacoto, Senegal, Gwen Jacobson
The Influence Of Native Woody Species, Combretum Glutinosum And Piliostigma Reticulatum, On Soil Fertility In Dialacoto, Senegal, Gwen Jacobson
Dissertations, Master's Theses and Master's Reports
In the low-fertility soils of Senegal, West Africa, management of woody species in agricultural fields has the potential to improve soil fertility and crop production. However, optimal species for this purpose have not been clearly defined. Thus, the objective of this study was to evaluate the potential for two native woody species, Combretum glutinosum and Piliostigma reticulatum, to improve soil fertility. Soil samples were collected from beneath tree crowns of P. reticulatum and C. glutinosum and compared with fertilizer-amended and non-amended soil from adjacent open fields in a bioassay experiment. Two common crops, millet (Pennisetum glaucum) and maize (Zea mays), …
Stress-Responsive Pathways And Small Rna Changes Distinguish Variable Developmental Phenotypes Caused By Msh1 Loss, Mon-Ray Shao, Sunil Kumar Kenchanmane Raju, John D. Laurie, Robersy Sanchez, Sally A. Mackenzie
Stress-Responsive Pathways And Small Rna Changes Distinguish Variable Developmental Phenotypes Caused By Msh1 Loss, Mon-Ray Shao, Sunil Kumar Kenchanmane Raju, John D. Laurie, Robersy Sanchez, Sally A. Mackenzie
Department of Agronomy and Horticulture: Faculty Publications
Background: Proper regulation of nuclear-encoded, organelle-targeted genes is crucial for plastid and mitochondrial function. Among these genes, MutS Homolog 1 (MSH1) is notable for generating an assortment of mutant phenotypes with varying degrees of penetrance and pleiotropy. Stronger phenotypes have been connected to stress tolerance and epigenetic changes, and in Arabidopsis T-DNA mutants, two generations of homozygosity with the msh1 insertion are required before severe phenotypes begin to emerge. These observations prompted us to examine how msh1 mutants contrast according to generation and phenotype by profiling their respective transcriptomes and small RNA populations.
Results: Using RNA-seq, we analyze …
Influence Of Olfactory And Visual Cover On Nest Site Selection And Nest Success For Grassland-Nesting Birds, Dillon T. Fogarty, Dwayne Elmore, Samuel D. Fuhlendorf, Scott R. Loss
Influence Of Olfactory And Visual Cover On Nest Site Selection And Nest Success For Grassland-Nesting Birds, Dillon T. Fogarty, Dwayne Elmore, Samuel D. Fuhlendorf, Scott R. Loss
Department of Agronomy and Horticulture: Faculty Publications
Habitat selection by animals is influenced by and mitigates the effects of predation and environmental extremes. For birds, nest site selection is crucial to offspring production because nests are exposed to extreme weather and predation pressure. Predators that forage using olfaction often dominate nest predator communities; therefore, factors that influence olfactory detection (e.g., airflow and weather variables, including turbulence and moisture) should influence nest site selection and survival. However, few studies have assessed the importance of olfactory cover for habitat selection and survival. We assessed whether ground-nesting birds select nest sites based on visual and/or olfactory cover. Additionally, we assessed …
Patterns Of Gene Expression In Western Corn Rootworm (Diabrotica Virgifera Virgifera) Neonates, Challenged With Cry34ab1, Cry35ab1 And Cry34/35ab1, Based On Next-Generation Sequencing, Haichuan Wang, Seong-Il Eyun, Kanika Arora, Sek Yee Tan, Premchand Gandra, Etsuko N. Moriyama, Chitvan Khajuria, Jessica D. Jurzenski, Huarong Li, Maia Donahue, Kenneth E. Narva, Blair Siegfried
Patterns Of Gene Expression In Western Corn Rootworm (Diabrotica Virgifera Virgifera) Neonates, Challenged With Cry34ab1, Cry35ab1 And Cry34/35ab1, Based On Next-Generation Sequencing, Haichuan Wang, Seong-Il Eyun, Kanika Arora, Sek Yee Tan, Premchand Gandra, Etsuko N. Moriyama, Chitvan Khajuria, Jessica D. Jurzenski, Huarong Li, Maia Donahue, Kenneth E. Narva, Blair Siegfried
Department of Agronomy and Horticulture: Faculty Publications
With Next Generation Sequencing technologies, high-throughput RNA sequencing (RNAseq) was conducted to examine gene expression in neonates of Diabrotica virgifera virgifera (LeConte) (Western Corn Rootworm, WCR) challenged with individual proteins of the binary Bacillus thuringiensis insecticidal proteins, Cry34Ab1 and Cry35Ab1, and the combination of Cry34/Cry35Ab1, which together are active against rootworm larvae. Integrated results of three different statistical comparisons identified 114 and 1300 differentially expressed transcripts (DETs) in the Cry34Ab1 and Cry34/35Ab1 treatment, respectively, as compared to the control. No DETs were identified in the Cry35Ab1 treatment. Putative Bt binding receptors previously identified in other insect species were not identified …
Interaction Of 2,4-D Or Dicamba With Glufosinate For Control Of Glyphosate-Resistant Giant Ragweed (Ambrosia Trifida L.) In Glufosinate-Resistant Maize (Zea Mays L.), Zahoor A. Ganie, Amit J. Jhala
Interaction Of 2,4-D Or Dicamba With Glufosinate For Control Of Glyphosate-Resistant Giant Ragweed (Ambrosia Trifida L.) In Glufosinate-Resistant Maize (Zea Mays L.), Zahoor A. Ganie, Amit J. Jhala
Department of Agronomy and Horticulture: Faculty Publications
Glyphosate-resistant (GR) giant ragweed is a problematic broadleaf weed in crops including maize and soybean in the Midwestern United States. Commercialization of crops with 2,4-D or dicamba and glufosinate resistance will allow post-emergence (POST) applications of these herbicides. Therefore, information is needed on how 2,4-D/dicamba will interact with glufosinate in various rate combinations. The objectives of this study were to evaluate the interaction of glufosinate plus 2,4-D and/or dicamba for control of GR giant ragweed, and to determine their effect on GR giant ragweed density, biomass, maize injury, and yield. Field experiments were conducted in 2013 and 2014 in a …
Changes In Soil Microbial Communities After 10 Years Of Winter Wheat Cultivation Versus Fallow In An Organic-Poor Soil In The Loess Plateau Of China, Hui Tian, Hui Wang, Xiaoli Hui, Zhaohui Wang, Rhae A. Drijber, Jinshan Liu
Changes In Soil Microbial Communities After 10 Years Of Winter Wheat Cultivation Versus Fallow In An Organic-Poor Soil In The Loess Plateau Of China, Hui Tian, Hui Wang, Xiaoli Hui, Zhaohui Wang, Rhae A. Drijber, Jinshan Liu
Department of Agronomy and Horticulture: Faculty Publications
Agricultural management methods, such as cultivation or fallowing, have led to significant changes in soil fertility and hence, crop yield. Such changes may have stemmed from changes in soil microbial communities and associated biogeochemical processes. This phenomenon is particularly true in organic-poor soil in the Loess Plateau of China. In this study, we examined three existing soil management regimes as part of a 10-year field experiment and evaluated their effects on fungal and bacterial community structures by performing high-throughput 454 pyrosequencing. These management regimes were (i) fertilized winter wheat (Triticum aestivum L.) (FW), (ii) continuous …
Regeneration And Invasion Of Cottonwood Riparian Forest Following Wildfire, Carissa L. Wonkka, Dirac L. Twidwell Jr., Christine H. Bielski, Craig R. Allen, Michael C. Stambaugh
Regeneration And Invasion Of Cottonwood Riparian Forest Following Wildfire, Carissa L. Wonkka, Dirac L. Twidwell Jr., Christine H. Bielski, Craig R. Allen, Michael C. Stambaugh
Department of Agronomy and Horticulture: Faculty Publications
Populus deltoides is considered to be a weak resprouter and highly susceptible to wildfire, but few post-wildfire studies have tracked P. deltoides response and resprouting within the Great Plains of North America. Following a wildfire in southwestern Kansas, U.S.A., we surveyed burned and unburned areas of a cottonwood riparian forest along the Cimarron River that included a major understory invader, tamarisk (Tamarix ramosissima Ledeb.). We tested the following hypotheses, which are consistent with the current understanding of P. deltoides response to wildfire in the Great Plains: (1) regeneration of P. deltoides will be low in areas burned by the …
Genome-Guided Phylo-Transcriptomic Methods And The Nuclear Phylogentic Tree Of The Paniceae Grasses, Jacob D. Washburn, James C. Schnable, Gavin C. Conant, Thomas P. Brutnell, Ying Shao, Yang Zhang, Martha Ludwig, Gerrit Davidse, J. Chris Pires
Genome-Guided Phylo-Transcriptomic Methods And The Nuclear Phylogentic Tree Of The Paniceae Grasses, Jacob D. Washburn, James C. Schnable, Gavin C. Conant, Thomas P. Brutnell, Ying Shao, Yang Zhang, Martha Ludwig, Gerrit Davidse, J. Chris Pires
Department of Agronomy and Horticulture: Faculty Publications
The past few years have witnessed a paradigm shift in molecular systematics from phylogenetic methods (using one or a few genes) to those that can be described as phylogenomics (phylogenetic inference with entire genomes). One approach that has recently emerged is phylo-transcriptomics (transcriptome-based phylogenetic inference). As in any phylogenetics experiment, accurate orthology inference is critical to phylo-transcriptomics. To date, most analyses have inferred orthology based either on pure sequence similarity or using gene-tree approaches. The use of conserved genome synteny in orthology detection has been relatively under-employed in phylogenetics, mainly due to the cost of sequencing genomes. While current trends …
Genetic Basis Of The Very Short Life Cycle Of ‘Apogee’ Wheat, Genqiao Li, Rungravee Boontung, Carol Powers, Vikas Belamkar, Tianrong Huang, Fang Miao, P. Stephen Baenziger, Liuling Yan
Genetic Basis Of The Very Short Life Cycle Of ‘Apogee’ Wheat, Genqiao Li, Rungravee Boontung, Carol Powers, Vikas Belamkar, Tianrong Huang, Fang Miao, P. Stephen Baenziger, Liuling Yan
Department of Agronomy and Horticulture: Faculty Publications
Background: ‘Apogee’ has a very short life cycle among wheat cultivars (flowering 25 days after planting under a long day and without vernalization), and it is a unique genetic material that can be used to accelerate cycling breeding lines. However, little is known about the genetic basis of the super-short life of Apogee wheat.
Results: In this study, Apogee was crossed with a strong winter wheat cultivar ‘Overland’, and 858 F2 plants were generated and tested in a greenhouse under constant warm temperature and long days. Apogee wheat was found to have the early alleles for four flowering time …
Genome-Wide Characterization Of Non-Reference Transposable Element Insertion Polymorphisms Reveals Genetic Diversity In Tropical And Temperate Maize, Xianjun Lai, James C. Schnable, Zhengqiao Liao, Jie Xu, Gengyun Zhang, Chuan Li, Erliang Hu, Tingzhao Rong, Yunbi Xu, Yanli Li
Genome-Wide Characterization Of Non-Reference Transposable Element Insertion Polymorphisms Reveals Genetic Diversity In Tropical And Temperate Maize, Xianjun Lai, James C. Schnable, Zhengqiao Liao, Jie Xu, Gengyun Zhang, Chuan Li, Erliang Hu, Tingzhao Rong, Yunbi Xu, Yanli Li
Department of Agronomy and Horticulture: Faculty Publications
Background: Maize was originally domesticated in a tropical environment but is now widely cultivated at temperate latitudes. Temperate and tropical maize populations have diverged both genotypically and phenotypically. Tropical maize lines grown in temperate environments usually exhibit delayed flowering, pollination, and seed set, which reduces their grain yield relative to temperate adapted maize lines. One potential mechanism by which temperate maize may have adapted to a new environment is novel transposable element insertions, which can influence gene regulation. Recent advances in sequencing technology have made it possible to study variation in transposon content and insertion location in large sets of …
Long-Term Tillage Impact On Soil Hydraulic Properties, Humberto Blanco-Canqui, Brian J. Weinhold, Virginia L. Jin, Marty R. Schmer, Leonard C. Kibet
Long-Term Tillage Impact On Soil Hydraulic Properties, Humberto Blanco-Canqui, Brian J. Weinhold, Virginia L. Jin, Marty R. Schmer, Leonard C. Kibet
Department of Agronomy and Horticulture: Faculty Publications
An improved understanding of the impact of tillage systems on soil hydraulic properties is necessary to conserve and manage soil water under a changing climate. The objective of this study was to specifically measure soil hydraulic properties (total porosity, water infiltration, saturated hydraulic conductivity, and water retention characteristics) in no-till, chisel plow, disk, and moldboard plow systems under rainfed continuous corn (Zea mays L.) after 35 yr on silty clay loam soils in eastern Nebraska. We measured ponded water infiltration (positive soil water pressure) and tension (-1 kPa matric potential) infiltration to exclude macropore (>125 mm diameter) flow. …
Reversing Resistance To Tembotrione In An Amaranthus Tuberculatus (Var. Rudis) Population From Nebraska, Usa With Cytochrome P450 Inhibitors, Maxwel C. Oliveira, Todd A. Gaines, Franck E. Dayan, Eric L. Patterson, Amit J. Jhala, Stevan Z. Knezevic
Reversing Resistance To Tembotrione In An Amaranthus Tuberculatus (Var. Rudis) Population From Nebraska, Usa With Cytochrome P450 Inhibitors, Maxwel C. Oliveira, Todd A. Gaines, Franck E. Dayan, Eric L. Patterson, Amit J. Jhala, Stevan Z. Knezevic
Department of Agronomy and Horticulture: Faculty Publications
Background: A population of Amaranthus tuberculatus (var. rudis) was confirmed resistant to 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibitor herbicides (mesotrione, tembotrione, and topramezone) in a seed corn/soybean rotation in Nebraska. Further investigation confirmed a non-target-site resistance mechanism in this population. The main objective of this study was to explore the role of cytochrome P450 inhibitors in restoring the efficacy of HPPD-inhibitor herbicides on the HPPD-inhibitor resistant A. tuberculatus population from Nebraska, USA (HPPD-R).
Background: A population of Amaranthus tuberculatus (var. rudis) was confirmed resistant to 4-hydroxyphenylpyruvate dioxygenase (HPPD)-inhibitor herbicides (mesotrione, tembotrione, and topramezone) in a seed corn/soybean rotation in Nebraska. Further investigation confirmed …
Can Cover Crop Use Allow Increased Levels Of Corn Residue Removal For Biofuel In Irrigated And Rainfed Systems?, S. J. Ruis, Humberto Blanco-Canqui, Paul J. Jasa, R. B. Ferguson, G. Slater
Can Cover Crop Use Allow Increased Levels Of Corn Residue Removal For Biofuel In Irrigated And Rainfed Systems?, S. J. Ruis, Humberto Blanco-Canqui, Paul J. Jasa, R. B. Ferguson, G. Slater
Department of Agronomy and Horticulture: Faculty Publications
Corn (Zea mays L.) residue removal at high rates can result in negative impacts to soil ecosystem services. The use of cover crops could be a potential strategy to ameliorate any adverse effects of residue removal while allowing greater removal levels. Hence, the objective of this study was to determine changes in water erosion potential, soil organic C (SOC) and total N concentration, and crop yields under early- and late-terminated cover crop (CC) combined with five levels of corn residue removal after 3 years on rainfed and irrigated no-till continuous corn in Nebraska. Treatments were no CC, early- and …
Using An Unmanned Aerial Vehicle To Evaluate Nitrogen Variability And Height Effect With An Active Crop Canopy Sensor, Brian Krienke, Richard B. Ferguson, Michael Schlemmer, Kyle Holland, David B. Marx, Kent M. Eskridge
Using An Unmanned Aerial Vehicle To Evaluate Nitrogen Variability And Height Effect With An Active Crop Canopy Sensor, Brian Krienke, Richard B. Ferguson, Michael Schlemmer, Kyle Holland, David B. Marx, Kent M. Eskridge
Department of Agronomy and Horticulture: Faculty Publications
Ground-based active sensors have been used in the past with success in detecting nitrogen (N) variability within maize production systems. The use of unmanned aerial vehicles (UAVs) presents an opportunity to evaluate N variability with unique advantages compared to ground-based systems. The objectives of this study were to: determine if a UAV was a suitable platform for use with an active crop canopy sensor to monitor in-season N status of maize, if UAV’s were a suitable platform, is the UAV and active sensor platform a suitable substitute for current handheld methods, and is there a height effect that may be …
Dissecting The Genetic Basis Of Local Adaptation In Soybean, Nonoy B. Bandillo, Justin E. Anderson, Michael B. Kantar, Robert M. Stupar, James E. Specht, George L. Graef, Aaron J. Lorenz
Dissecting The Genetic Basis Of Local Adaptation In Soybean, Nonoy B. Bandillo, Justin E. Anderson, Michael B. Kantar, Robert M. Stupar, James E. Specht, George L. Graef, Aaron J. Lorenz
Department of Agronomy and Horticulture: Faculty Publications
Soybean (Glycine max) is the most widely grown oilseed in the world and is an important source of protein for both humans and livestock. Soybean is widely adapted to both temperate and tropical regions, but a changing climate demands a better understanding of adaptation to specific environmental conditions. Here, we explore genetic variation in a collection of 3,012 georeferenced, locally adapted landraces from a broad geographical range to help elucidate the genetic basis of local adaptation. We used geographic origin, environmental data and dense genome-wide SNP data to perform an environmental association analysis and discover loci displaying steep …
Comparison Of Organic And Integrated Nutrient Management Strategies For Reducing Soil N2O Emissions, Rebecca F. Graham, Samuel E. Wortman, Cameron M. Pittelkow
Comparison Of Organic And Integrated Nutrient Management Strategies For Reducing Soil N2O Emissions, Rebecca F. Graham, Samuel E. Wortman, Cameron M. Pittelkow
Department of Agronomy and Horticulture: Faculty Publications
To prevent nutrient limitations to crop growth, nitrogen is often applied in agricultural systems in the form of organic inputs (e.g., crop residues, manure, compost, etc.) or inorganic fertilizer. Inorganic nitrogen fertilizer has large environmental and economic costs, particularly for low-input smallholder farming systems. The concept of combining organic, inorganic, and biological nutrient sources through Integrated Nutrient Management (INM) is increasingly promoted as a means of improving nutrient use efficiency by matching soil nutrient availability with crop demand. While the majority of previous research on INM has focused on soil quality and yield, potential climate change impacts have rarely been …
Rooting For Food Security In Sub-Saharan Africa, Nicolas Guilpart, Patricio Grassini, Justin Van Wart, Haishun Yang, Martin K. Van Ittersum, Lenny G.J. Van Bussel, Joost Wolf, Lieven Claessens, Johan G.B. Leenaars, Kenneth G. Cassman
Rooting For Food Security In Sub-Saharan Africa, Nicolas Guilpart, Patricio Grassini, Justin Van Wart, Haishun Yang, Martin K. Van Ittersum, Lenny G.J. Van Bussel, Joost Wolf, Lieven Claessens, Johan G.B. Leenaars, Kenneth G. Cassman
Department of Agronomy and Horticulture: Faculty Publications
There is a persistent narrative about the potential of Sub-Saharan Africa (SSA) to be a ‘grain breadbasket’ because of large gaps between current low yields and yield potential with good management, and vast land resources with adequate rainfall. However, rigorous evaluation of the extent to which soils can support high, stable yields has been limited by lack of data on rootable soil depth of sufficient quality and spatial resolution. Here we use location-specific climate data, a robust spatial upscaling approach, and crop simulation to assess sensitivity of rainfed maize yields to root-zone water holding capacity. We find that SSA could …
Can Yield Gap Analysis Be Used To Inform R & D Prioritisation?, P. A. J. Van Oort, K. Saito, I. Dieng, P. Grassini, K. G. Cassman, M. K. Van Ittersum
Can Yield Gap Analysis Be Used To Inform R & D Prioritisation?, P. A. J. Van Oort, K. Saito, I. Dieng, P. Grassini, K. G. Cassman, M. K. Van Ittersum
Department of Agronomy and Horticulture: Faculty Publications
The phrase “biggest bang for a buck” is associated with the policy making question that governments and development agencies face: “Where and which crops should receive highest priority for improving local and global food supply?”. A first step of prioritisation is to identify region x crop combinations for which high impact can be anticipated. We developed a new method for this prioritisation exercise and applied it to data from the Global Yield Gap and Water Productivity Atlas (GYGA). Our prioritisation distinguishes between two policy objectives (humanitarian and economic) and builds upon the relative yield gap and climate risk. Results of …