Genetics Commons^™

Marine Farm Planning And Consultation Processes In Western Australia, Dave Everall

Fisheries Management Papers

The development of a sustainable aquaculture industry in Western Australia is considered to be a high priority by the Government. The marine farming industry has a bright future in Western Australia, but there is a need to balance its developing needs for suitable waters with those of existing activities, and with community expectations for accountability and transparency in the resolution of equity and resource sharing decisions. The purpose of this report is to review the existing planning and consultation processes for pearling and aquaculture in WA and recommend how they may be improved and incorporated into a single process. It …

Ms2 Coat Protein Mutants Which Bind Qβ Rna, Marc Spingola, David Peabody

Biology Department Faculty Works

The coat proteins of the RNA phages MS2 and Qβ are structurally homologous, yet they specifically bind different RNA structures. In an effort to identify the basis of RNA binding specificity we sought to isolate mutants that convert MS2 coat protein to the RNA binding specificity of Qβ. A library of mutations was created which selectively substitutes amino acids within the RNA binding site. Genetic selection for the ability to repress translation from the Qβ translational operator led to the isolation of several MS2 mutants that acquired binding activity for Qβ RNA. Some of these also had reduced abilities to …

Fluorescence In Situ Hybridization Analysis Of Human Embryos Derived From In Vitro And In Vivo Matured Oocytes, Constance Descisciolo

Theses and Dissertations in Biomedical Sciences

Despite adequate hormonal stimulation, oocytes collected for the purpose of in vitro fertilization and embryo transfer display several levels of nuclear maturity. Preovulatory or mature oocytes, technically those that are Metaphase I or II, are inseminated shortly after aspiration and assessed for fertilization the following day. Prophase I oocytes, also called germinal vesicle-bearing or immature oocytes, require a 24-36 hour period in culture before being exposed to spermatozoa. During this time, the majority of Prophase I oocytes complete nuclear maturation in vitro, progressing from germinal vesicle breakdown through first polar body extrusion. If inseminated, many in vitro matured oocytes fertilize …

Oral Cancer Screening, Damon Omar Watson

Honors Theses

Cancers of the oral cavity and pharynx have increased throughout the decades. Since oral cancer represents a small percentage of the total cancers in the United States, it is often overlooked. Though this is the case, the results of this cancer can be devastating. To address this issue, an Oral Cancer Screening was organized on August 14, 1996 at the West Michigan Cancer Center in Kalamazoo. This was a joint collaboration between the author, the West Michigan Cancer Center, and the Kalamazoo Valley Dental Society. This event allowed research to take place concerning the data obtained. Confidential results and information …

The Aquaculture Of Non-Endemic Species In Western Australia, Tina Thorne

Fisheries Management Papers

This Management Paper has been drafted in liaison with the Department of Environmental Protection in accordance with the principles of risk assessment and taking into account translocation issues of non-endemic species such as redclaw (Cheras quadricarninatus). It is considered that the implementation of this policy will protect the natural environment and native crayfish species. It will also allow for the development of a redclaw industry, and provide the first step towards self regulation of that industry.

Coming To Terms With Heritability, Scott F. Stoltenberg

Department of Psychology: Faculty Publications

The complex mechanisms of heredity are little appreciated by nonspecialists, in some measure, because of misunderstandings that are perpetuated when words used for technical terms have other, more widely understood, folk meanings. When a word has both technical and folk meanings, it is the responsibility of the specialist to avoid promoting confusion by either using extremely cautious and precise language when using the term or, in cases when confusion is inevitable, abandoning the term in favor of one without a widely understood folk meaning. The study of heredity is beset by such confusion, and the term heritability appears to be …

Management Arrangements For The Western Rock Lobster Fishery For The 1997/98 Season, F. B. Prokop

Fisheries Management Papers

This paper deals with the proposed management strategies for the 1997/98 seasons. The purpose of this paper is to present the views of RLIAC on management arrangements for the 1997/98 rock lobster season and to indicate the strategic directions that long term management of this important fishery might take so as to ensure both its biological sustainability and the optimisation of product value for both the State and the participants in the fishery.

Y-Chromosome Effects On Drosophila Geotaxis Interact With Genetic Or Cytoplasmic Background, Scott F. Stoltenberg, Jerry Hirsch

Department of Psychology: Faculty Publications

Previously, all of the major fruit fly, Drosophila melanogaster, chromosomes (I, II, and III) have been shown to be associated with geotaxis, but the Y chromosome has not. Using two methods (back-crossing and chromosome substitution), Y chromosomes from lines that have evolved stable, extreme expressions of geotaxis were placed into different genetic and cytoplasmic backgrounds to test the resulting males for geotaxis. The results of the back-crossing do not support the interpretation of Y-chromosome effects on geotaxis. These tests do not have sufficient statistical power, however, to detect small genetic effects. In the chromosome substitution experiment, the geotaxis-line Y …

Genetic Information And The Workplace: Legislative Approaches And Policy Challenges, Karen H. Rothenberg, Barbara Fuller, Mark Rothstein, Troy Duster, Mary Jo Ellis Kahn, Rita Cunningham, Beth Fine, Kathy Hudson, Mary-Claire King, Patricia Murphy, Gary Swergold, Francis Collins

Faculty Scholarship

No abstract provided.

Management Of The South Coast Purse Seine Fishery, J Fowler, K Donohue, R.C. J. Lenanton, M. Moran, D Gaughan

Fisheries Management Papers

This paper has presented a strategy for moving the management of the small pelagics fishery off the south coast to management of the whole fishery, which facilitates a more biologically sound and economically stable fishery.

A Pricing Policy For Fisheries Agencies, Management Committee Of Scfa, Standing Committee Of Fisheries And Aquaculture (Sfca), Department Of Primary Industries And Energy

Fisheries Management Papers

The intent of this paper is to inform members of Standing Committee for Fisheries and Aquaculture (SCFA) and the members of the Ministerial Council for Fisheries, Forestry and Aquaculture of the methods of fee setting that are currently applied by fisheries agencies in Australia, and alternative pricing policies for fisheries agencies.

Identification Of Poinsettia Cultivars Using Rapd Markers, Jing-Tian Ling, Roger Sauve, Nick Gawel

Agricultural and Environmental Sciences Faculty Research

Randomly amplified polymorphic DNA (RAPD) techniques were used to compare the DNA from leaf tissues of nine commercial poinsettia (Euphorbia pulcherrima Wild ex Klotzsch) cultivars. Amplification occurred in 57 out of 60 (95%) tested primers. Nine primers that revealed polymorphisms among cultivars were selected for further evaluation. Forty-eight RAPD bands were scored from these primers, and 33 (69%) were polymorphic. All tested cultivars could be discriminated with seven bands generated from primers OPB7 and OPC13. Results of a UPGMA cluster analysis and principal components analysis placed the nine cultivars into two groups: one group consisted of `Jingle Bells', `Supjibi', …

Selection Of Populations Of Puccinia Recondita F. Sp. Tritici For Shortened Latent Period On A Partially Resistant Wheat Cultivar, Jeffery S. Lehman, Gregory Shaner

Biology and Earth Science Faculty Scholarship

Wild-type fungal population 851-WT was selected for shortened latent period on cv. CI 13227 for five uredinial generations to study the adaptation of Puccinia recondita f. sp. tritici to partially resistant wheat cultivars. Differences among wild-type and selected populations for traits contributing to parasitic fitness (i.e., latent period, infection frequency, and uredinium area and growth rate) were assessed in monocyclic infection experiments on susceptible cv. Monon and partially resistant cvs. Suwon 85, Sw 72469-6, L-574-1, and CI 13227. Differences were greatest among fungal populations on cv. CI 13227. The mean latent period of selected population 851-C5 was 2 days shorter …

Better Flock Benchmarking From Wether Trials, David Windsor, Bronwyn Clarke

Journal of the Department of Agriculture, Western Australia, Series 4

Genetic links between wether trials put in place by Agriculture Western Australia's Wool Program are helping farmers benchmark the productivity of their flocks on a statewide basis. David Windsor and Bronwyn Cklarke report on the progress to date.

Comparisons Of Genetic Variance And Physiological Responses In Two Populations Of Western Mosquitofish, Gambusia Affinis, Brett Egger

Masters Theses

The study was conducted to determine the effects of lowered genetic variance in the Western mosquitofish (Gambusia affinis) on the physiological parameters of critical thermal maximum and minimum pH. Mosquitofish were obtained from two small central Illinois ponds, Lost Pond and Shadow Pond, by seines and dip nets. Once caught, fish were returned to the laboratory and acclimated for a minimum of five days at a temperature of 27°C and a pH of 8.25. At the beginning of each experimental run, fish were subjected to the physiological experiments for determination of critical thermal maximum and minimum pH, and then measured …

Achievements In Wool 1997, Agriculture Western Australia

Animal production and livestock published reports

The Wool Strategy Group, which I initiated in 1993, and Agriculture Western Australia's Wool Program are strategic partners working together with industry to develop and market this State's wool industry.

Wool is Western Australia's second most important agricultural industry, with a current export value of $643 million. It has the potential to return to a billion dollar industry in the next five years and the industry needs to be strongly focused on producing what the market requires to take advantage of this.

The Wool Strategy Group, led by Chairman Mr Philip Gardiner, and the Wool Program, have established an international …

A Study Of The Effects Of Consanguinity At The Genomic Level In Two Pakistani Bradaris, Sheena Sullivan

Theses : Honours

The purpose of the project was to assess the effects of inbreeding on the genetic constitution of two Pakistani bradaris (literally defined as brotherhoods). Both bradaris contain children born to consanguineous (first cousin) and nonconsanguineous marriages. DNA samples have been supplied by Dr Subaib Ahmed of the Armed Forces Institute of Pathology in Rawalpindi, for a total of 91 individuals. The specific allele frequencies, and levels of homozygosity of each bradari, were determined using twenty fluorescence-labelled microsatellite markers for chromosomes 13 and 15. Amplification of the DNA was performed using the polymerase chain reaction (PCR). The PCR products were separated …

Breeding For Improved Feed Conversion Efficiency, Alan Lymbery

Journal of the Department of Agriculture, Western Australia, Series 4

Alan Lymbery reports on a trial that has started at Vasse Research Atation to investigate the impact of genetic improvement on feed conversion efficiency on costs of production.

Homozygosity Levels In Consanguineous Populations: A Study Of The Sankethi Community, Karnataka, India, Janet Cahill

Theses : Honours

The project has studied the inheritance of microsatellite alleles across four chromosomes within two multi-generation families from a highly endogamous community, the Sankethi of Karnataka, India. The two families each have members from four generations participating in the study. Finger prick blood samples and detailed pedigree information were collected from subjects in India. DNA was extracted from the blood spot samples using a phenol-chloroform technique, and analysed by spectrophotometry to determine DNA concentrations. Fluorescent markers from chromosomes 15, 16, 17 & 18 were amplified using polymerase chain reaction (PCR) techniques on a Perkin Elmer 96 well thermocycler. The PCR products …

Parasite Biodiversity And Emerging Pathogens: A Role For Systematics In Limiting Impacts On Genetic Resources, Eric P. Hoberg

Harold W. Manter Laboratory of Parasitology: Faculty Publications

Emergence of pathogenic organisms continues as a threat to overall biodiversity and genetic resources. Macroparasites including helminths constitute a potential threat to economically important resources in agriculture and conservation biology. Limitation of this threat can be achieved through survey and inventory for biodiversity and the application of systematics to understand the host range , biogeography and history of faunas. Systematics constitutes the foundation for recognition of endemic and introduced elements of faunas and the basis for predicting the behavior of pathogens introduced to new ecological settings or host groups. The basis for emergence of pathogens has both a deep historical …

Assignment Of Fragile Site 8e (Fra8e) To Human Chromosome Band 8q24.11 Adjacent To The Hereditary Multiple Exostoses 1 Gene And Two Overlapping Langer-Giedion Syndrome Deletion Endpoints, April L. Hill, Y. Harada, E. Takahashi, J. Hou, M. J. Wagner, D. E. Wells

Biology Faculty Publications

The distamycin A inducible fragile site, FRA8E, Fra(8) (q24.11) has been previously mapped to 8q24.11, proximal to the MYC gene, by fluorescent in situ hybridization (Takahasi et al., 1991). This fragile site has been shown to be present in about 1 out of every 140 healthy Japanese individuals (Takahasi et al., 1988). To more precisely map FRA8E, we have used cosmids isolated from the Langer-Giedion chromosomal region (LGCR) for FISH analysis. Langer-Giedion syndrome (LGS) is a contiguous gene syndrome characterized by chromosome deletions in Sq24.11 (Ludecke et al., 1991). One of the genes known to be involved in the etiology …

Circadian Clock-Controlled Genes Isolated From Neurospora Crassa Are Late Night- To Early Morning-Specific, Deborah Bell-Pedersen, Mari L. Shinohara, Jennifer J. Loros, Jay C. Dunlap

Dartmouth Scholarship

An endogenous circadian biological clock controls the temporal aspects of life in most organisms, including rhythmic control of genes involved in clock output pathways. In the fungus Neurospora crassa, one pathway known to be under control of the clock is asexual spore (conidia) development. To understand more fully the processes that are regulated by the N. crassa circadian clock, systematic screens were carried out for genes that oscillate at the transcriptional level. Time-of-day-specific cDNA libraries were generated and used in differential screens to identify six new clock-controlled genes (ccgs). Transcripts specific for each of the ccgs …

Shark Bay World Heritage Property: Summary Of Public Submissions To The Draft Management Plan For Fish Resources, Kevin A. Francesconi

Fisheries Management Papers

In November 1994, the draft management plan for fish resources for the Shark Bay World Heritage Area (Fisheries Management Paper no 72) was released for public comment. This report summarises and analyses the 28 written public submissions received to the draft fisheries management plan.

Shark Bay Management Paper For Fish Resources, Fisheries Department Of Western Australia, Department Of Conservation And Land Management

Fisheries Management Papers

This paper deals with the management of fish resources in the Shark Bay World Heritage Property which are the responsibility of the Fisheries Department of Western Australia. It was prepared by the Fisheries Department in close liaison with the Department of Conservation and Land Management. The policies and guidelines proposed in this paper will be followed for a period not exceeding 10 years.

Pearling And Aquaculture In The Dampier Archipelago - Existing And Proposed Operations - A Report For Public Comment, Ben Fraser

Fisheries Management Papers

This discussion paper has been prepared by the Fisheries Department of WA as part of a consultative process to enable the public to comment on existing and proposed pearling and aquaculture activities in the Dampier Archipelago. This report follows on from Fisheries Management Report 90 - the Driscoll Report - and provides more detailed information about pearling and aquaculture to enable the public to consider and comment on individual projects.

Molecular Phylogeny And Typing Of Blackflies (Diptera: Simuliidae) That Serve As Vectors Of Human Or Bovine Onchocerciasis, Jianming Tang, Kenneth Pruess, Eddie W. Cupp, Thomas R. Unnasch

Department of Entomology: Faculty Publications

A subregion of the mitochondrial large subunit (16s) rRNA gene was amplified by polymerase chain reaction (PCR) from nine species of blackflies (Diptera: Simuliidae) which serve as natural or experimental vectors of human or bovine Onchocerca parasites. PCR products from each species of blackfly were tested by directed heteroduplex analysis (DHDA), and their genotypes established according to diagnostic banding patterns of the heteroduplex products. Three alleles of mitochondrial 16s rRNA were found to exist in members of the Simulium (Edwardsellum) damnosum sensu lato complex from West Africa, and two alleles were found in the Neotropical Simulium (Psilopelmia …

Offshore Constitutional Settlement 1995, H. G. Brayford, G. E. Lyon

Fisheries Management Papers

The Offshore Constitutional Settlement OCS is a legal arrangement between the Commonwealth and State Governments, and defines control over the fisheries which operate off each State of Australia. For the Western Australian coast, the first set of arrangements took effect in 1987. The OCS of 1995 specifies five arrangements, under which the fisheries inside the 200 nautical mile approximately 370 km limit of the Australian Fishing Zone AFZ come under either State, Commonwealth, or joint control.

A Report On The Issues Affecting The Use Of The Dampier Archipelago, Peter Driscoll

Fisheries Management Papers

This report was commissioned by the Minister for Fisheries following concerns about resource sharing, allocation of licences and leases for pearling and aquaculture, recreational and commercial fishing opportunities, and local residents continued ability to access the islands and marine areas of the Dampier Archipelago. The purpose of this report is to provide a scoping document for a marine planning study for the Dampier Archipelago for the Fisheries Department and the Minister for Fisheries.

Fishermen's Views On The Future Management Of The Rock Lobster Fishery: A Report Prepared On Behalf Of The Rock Lobster Industry Advisory Committee, The Marketing Centre, Rock Lobster Industry Advisory Committee

Fisheries Management Papers

In June 1995, a self-completion survey of fishermen in the rock lobster fishery was sent out by The Marketing Centre to 589 licensees. A total of 206 valid responses were received. The questionnaire was fairly long and dealt with a number of complex issues. As such, this response rate of 36.0% compares favorably with the average for postal surveys of around 40.0%. The following represents the main findings from the survey.

Same Fish - Different Rules - Proceedings Of The National Fisheries Management Network Workshop Held As Part Of The Third Australasian Fisheries Managers Conference August 1995, F. B. Prokop

Fisheries Management Papers

This workshop represents the third time that a specific recreational fisheries workshop has been held in conjunction with the Australasian Fisheries Managers Conference. It is designed to analyse the different management approaches from the various fisheries agencies which have responsibility for selected species. The case studies that make up the workshop have been selected to represent the diversity of situations including freshwater, marine, pelagic and invertebrate species.