Biodiversity Commons^™

Southern California Marine Protected Areas Promote Bolder Fish Populations, Lucian Himes, Florybeth F. La Valle

Summer Undergraduate Research in Biology Program

Marine protected areas (MPAs) aim to protect habitats and ecosystems to promote the diversity and health of marine populations. To evaluate the health of fish populations within and outside of MPAs in Southern California, we used flight initiation distance (FID). FID is the distance at which an individual will flee from a perceived predator and is a direct measure of boldness. Lower FIDs are indicative of bolder populations. Lower FID values indicate that fish will have the opportunity to dedicate less energy to fleeing from predators which could then be used for increased foraging. Data was collected from eight locations …

Textbook Tasks For Social Change: Instantiation Of Development Debates And Interposition Of Pedagogical Interventions In Media Literacy Education, John N. Ponsaran

Journal of Sustainable Social Impact

As materialization of their discursive stance as instructional communicators and media producers, textbook authors instantiate various development debates as well as interpose a wide range of pedagogical interventions for critical reflection and adoption by learners. This qualitative study sought to situate these development debates and the counterpart pedagogical interventions within the context of textbook task design as an application and embodiment of social justice communication. The development debates serve as the proposed contexts for media text analyses, reflective exercises, case studies, and media production, among others. Correspondingly, the interposition of interventions allows students to make sense of and act upon …

Conserving Nature's Chorus: Local And Landscape Features Promoting Frog Species Richness In Farm Dams, Martino E. Malerba, Jodi J L Rowley, Peter I. Macreadie, James Frazer, Nicholas J. Wright, Nayyar Zaidi, Asef Nazari, Dhananjay Thiruvady, Don A. Driscoll

Climate Science Research Articles

Habitat loss is a key factor in the ongoing freshwater biodiversity crisis. A promising way to help tackle the rapid decline in freshwater biodiversity is to improve the potential for artificial wetlands to provide habitat for aquatic wildlife. Farm dams (also known as agricultural ponds) are among the most abundant waterbodies in agricultural landscapes and can act as “oases” against droughts for many species. Despite their prominent role in agriculture, predictive models to evaluate their ecological potential are yet to emerge. Here we use a continental-scale data set of 104,013 audio recordings from citizen scientists to identify and locate 107 …

D-Shaped Nematode Eggs In The Feces Of Rangifer Tarandus: A Story In Pictures, Olga A. Loginova

MANTER: Journal of Parasite Biodiversity

D-shaped nematode eggs in the feces of Rangifer tarandus are expected to be oxyurid nematodes (Nemata: Oxyurida) of the genus Skrjabinema. The species S. tarandi is considered species-specific for this host. There is no consensus regarding the cross-infection of reindeer and sheep with S. ovis and S. tarandi. The drawings proposed by descriptors complicate differential diagnostics. Micrographs of S. tarandi eggs obtained via light microscopy and scanning electron microscopy as well as photographs of S. ovis eggs and drawings made on their basis are proposed to confidently distinguish between representatives of these two species, taking into account morphometric data. Thus, …

The Uses And Limitations Of Citizen Science For Monitoring The Australian Grey Nurse Shark (Carcharias Taurus) Population, Leah Corckran

Independent Study Project (ISP) Collection

iNaturalist is a citizen science photographic database, which is an underutilized resource in photographic identification research studies. Grey nurse sharks are critically endangered and there is a lack of knowledge regarding the estimated population size, longevity, and interactions with fisheries of this species off the coasts of Australia. To determine how photos submitted to iNaturalist can be used in Carcharias taurus conservation, the photographs were evaluated on a number of criteria including: location, date, visibility of spot patterns, visible sex characteristics, and visible injuries. In total, 814 photographs of grey nurse sharks were obtained from the iNaturalist database. Only 23.2% …

2023 Fall Newsletter, Plaster Creek Stewards

Newsletters

Highlights:

Our Year at a Glance

Marketing as Education

Plaster Creek Mystery

Insect Biodiversity Study

Green Team and Wellbeing

Coming in 2024

Community Complexity Of A Pollination Network: Analysis Of Plant-Pollinator Interactions In The Eastern Ecuadorian Cloud Forest, Anisa López-Ruiz

Independent Study Project (ISP) Collection

Global declines in pollinators and temporal/spatial mismatches between plants and pollinators threaten the integrity of plant-pollinator networks. Ecological network analysis provides a powerful framework for understanding the dynamics of plant-pollinator networks and measures of community complexity that can help inform areas of priority in conservation. This study observed a plant-pollinator network in a secondary forest close to the Río Zuñac Reserve in the eastern Ecuadorian cloud forest to identify assemblages of plants and pollinators and evaluate measures of community complexity, including specialization and nestedness. Flowering plants were identified and observed along a 1.2 km transect, and floral visitors to these …

Friends In High Places: Establishing Pollination Networks For The Páramos Of Central Ecuador, Emma Diaz

Independent Study Project (ISP) Collection

Well-known for being a global biodiversity hotspot, the Andean Páramos hosts a unique array of floristic diversity seen nowhere else in the world (Luteyn, n.d.). With the resiliency of this ecosystem dependent on the successful reproduction of these plants, it is crucial to understand the pollination network which sustains them. Modern-day research has outlined networks in the Chilean, Venezuelan, and Argentinean Páramos, but one has yet to be defined for Ecuador, despite being the suspected home to nearly half of floristic diversity in the Páramos (Arroyo et al., 1985; Pelayo et al., 2021; Medan et al., 2023; Caranqui et al., …

Reef Fish Wariness Behavior: Fish Flight Initiation Distance Mediated By Territoriality And Body Size In Three Reef Sites Off The Western Coast Of Isla Colón, Bocas Del Toro, Panamá, Alina G. Irvine

Independent Study Project (ISP) Collection

Coral reefs are highly productive and diverse underwater ecosystems, providing a variety of environmental services including sand generation, nutrient processing, fish supply, and tourism. However, coral reefs have been increasingly impacted by natural and anthropogenic disturbances, which has negatively affected fish security within their environment. A significant observation is the reduction in evasive behaviors among reef fish in marine reserves compared to those exposed to anthropogenic threats. The present research aims to investigate the factors mediating fish wariness behavior through an exploration of the roles of territoriality and body size on fish flight initiation distance (FID). FID is the distance …

Lha, Lu, And Shipda: Religious Landscape In A Conservation Area, Luke Stumpfl

Independent Study Project (ISP) Collection

Living in a political, cultural, and geographic border region between Nepal and Tibet (People’s Republic of China), the families of Tsum Valley face many demands from their sociopolitical, religious, and economic climate. Practicing Tibetan Buddhism, the people uphold a set of rules implemented by the community with leadership from Serap Dorje Drukpa Rinpoche over 100 years ago that prohibits the intentional murder of all animals. Hailed by leaders and scholars as a haven of biodiversity conservation due to this customary-turned- municipal law, Tsum Valley also exists within Manaslu Conservation Area governed by an entity of the federal government of Nepal …

Alfred Russel Wallace Notes 27. When Wallace Broke With Darwin., Charles H. Smith

Faculty/Staff Personal Papers

The year 1866 was the first year Alfred Russel Wallace showed definite signs of breaking with Darwin over the limits of natural selection. Attention is drawn to a July 1866 exchange of letters between the two, and how this foreshadowed what followed.

Civilian Oversight Of Police Through The Lens Of Polarities Of Democracy, Joseph A. Mcmillan, Jacqueline D. Smith, William J. Benet

Journal of Sustainable Social Impact

Following the murder of George Floyd, the U.S. Congress called upon the National Organization for Black Law Enforcement Executives (NOBLE) to play a role in the reimagining of policing in America, including a transformation of policing from a warrior to a guardian mentality. In turn, NOBLE partnered with the Institute for Polarities of Democracy (the Institute) to conduct an analysis of the 21st Century Policing Report (the Report), which focused on addressing a myriad of issues that challenged the relationship between the police and communities. The Report determined there were six “pillars” necessary for effective policing in America, including (1) …

The Himalayan Uplift And Evolution Of Aquatic Biodiversity Across Asia: Snowtrout (Cyprininae: Schizothorax) As A Test Case, Binod Regmi, Marlis R. Douglas, Karma Wangchuk, Zachery D. Zbinden, David R. Edds, Singye Tshering, Michael E. Douglas

Biological Sciences Faculty Publications and Presentations

Global biodiversity hotspots are often remote, tectonically active areas undergoing climatic fluctuations, such as the Himalaya Mountains and neighboring Qinghai-Tibetan Plateau (QTP). They provide biogeographic templates upon which endemic biodiversity can be mapped to infer diversification scenarios. Yet, this process can be somewhat opaque for the Himalaya, given substantial data gaps separating eastern and western regions. To help clarify, we evaluated phylogeographic and phylogenetic hypotheses for a widespread fish (Snowtrout: Cyprininae; Schizothorax) by sequencing 1,140 base pair of mtDNA cytochrome-b (cytb) from Central Himalaya samples (Nepal: N = 53; Bhutan: N = 19), augmented with 68 GenBank …

Flujos De Servicios Ecosistémicos En Un Área Marina Protegida Del Atlántico Sur: Perspectivas Desde El Análisis De La Teoría De Redes, Mitch Porter

Independent Study Project (ISP) Collection

En cuestiones de gestión de áreas protegidas, los servicios ecosistémicos se tienen cada vez más en cuenta junto con la conservación de la biodiversidad. Sin embargo, las decisiones que se toman sobre la conservación de los servicios ecosistémicos no suelen incluir los posibles efectos en cascada de la pérdida de biodiversidad sobre la provisión de servicios. Los conocimientos de la teoría de redes y los estudios de robustez pueden proporcionar una metodología para evaluar la vulnerabilidad de estos servicios frente la estructura trófica de los ecosistemas que los proveen. A través de una serie de simulaciones de extinción para la …

Bryophyte (Sl) Growth And Environmental Factors Along An Altitudinal Gradient On Cerro Gaital, El Valle, Coclé, Panamá, Julian Grace-Martin

Independent Study Project (ISP) Collection

Research on bryophytes (SL) in the tropics has been lacking compared with the high number of species found there and the potential benefit of bryophytes (SL) as indicators of pollutants and other forms of human disturbance. This study investigated whether or not bryophyte (SL) growth patterns showed relation when compared with environmental factors on the mountain Cerro Gaital in El Valley, Panamá. Whether or not bryophytes (SL) are present, extent of the area covered by their growth, and height of their growth are all aspects of bryophyte (SL) growth that were used. In this study, these three aspects are compared …

Patrimonio Cultural, Arqueología, Medio Ambiente Y Economía: ¿Cómo Ha Afectado La Construcción Del Aeropuerto Internacional De Chinchero-Cusco A Las Comunidades Y La Tierra De Chinchero?, Sydney Berenson

Independent Study Project (ISP) Collection

La urbanización gubernamental ha sido un problema para las poblaciones indígenas, el medio ambiente y la protección del patrimonio cultural durante numerosos años en todo el Perú. Más recientemente, en la pequeña ciudad de Chinchero, ubicada a unos 30 kilómetros al noroeste de Cusco, se está construyendo un nuevo aeropuerto internacional, Aeropuerto Internacional de Chinchero-Cusco (AICC), para reemplazar el actual aeropuerto nacional de Cusco. Chinchero es un importante centro urbano que está conformado por 13 comunidades campesinas que participan en la industria agrícola de la región, además consta con una importante comunidad artesanal, ruinas arqueológicas precolombinas y una gran biodiversidad. …

Ethnomedicinal Importance Of Family Lamiaceae And Family Rosaceae Among Local Communities Of Dir Kohistan, Khyber Pakhtunkhwa, Pakistan, Midrar Ullah, Atta Ullah, Akhtar Aman, Hamid Hussain Afridi, Muhammad Afzal Naeem

Journal of Bioresource Management

The present study was conducted to document the medicinal uses of Family Lamiaceae and Rosaceae in Dir Kohistan during the summer of 2016. Field visits were arranged to different resource-based areas of Dir Kohistan and plants were identified according to their phytogeographic locations. The study revealed that nine species of the family Lamiaceae and seven species of the family Rosaceae are used by the local community for the treatment of human ailments. They utilized these plants through personal experiences and ancestral prescriptions. The plants were used for different health disorders like kidney pain, lung infections, jaundice, as carminative, antimicrobial, antifungal, …

The First Record Of Orthochirus Glabrifrons (Kraepelin, 1903) (Scorpiones: Buthidae) From The United Arab Emirates, František Kovařík, Ersen A. Yağmur, Alexander Ullrich, Balázs Buzás

Euscorpius

Orthochirus glabrifrons (Kraepelin, 1903) (Scorpiones: Buthidae) was described from Oman (Muscat). Here, we summarize known localities from Oman as well as records from the United Arab Emirates, which is the new country record for this species. Illustrations of morphology of both sexes are given together with a map of distribution. A lectotype of Orthochirus glabrifrons (Kraepelin, 1903) is designated. Paraorthochirus kaspareki Lourenço & Huber, 2000 and Paraorthochirus kinzelbachi Lourenço & Huber, 2000 are synonymized with Orthochirus glabrifrons (Kraepelin, 1903), syn. n.

In Memoriam Rolando Teruel Ochoa (1974 – 2023), Luis F. De Armas, Sheyla Yong

Euscorpius

This is an obituary of Rolando Teruel Ochoa (1974–2023), a great Cuban arachnologist. A full list of his works is appended, as well as a list of scorpions and other arachnids described by Rolando.

Newly Recorded Panus Lecomtei (Fr.) Corner (Basidiomycota: Panaceae) For Indonesia, Ivan Permana Putra, Rudy Hermawan, Ali Bin Abithalib Salman

Makara Journal of Science

Panus lecomtei (Polyporales) is reported for the first time from Indonesia at the IPB University Campus Forest (IPBUCF). This species has similar macroscopic features to P. strigellus and P. neostrigosus. This study aimed to confirm the taxonomic position of P. lecomtei found at IPBUCF based on morphological and molecular evidence. The specimens were described by their macroscopic and microscopic characteristics. A phylogenetic approach was used with the internal transcribed spacer 1/2 sequence data. The combination of morphological and molecular analyses confirmed the taxonomic position of our specimens as P. lecomtei. The recorded species was distinguished by gregarious basidiomata, an …

The Influence Of Hiking Trails On Salamanders, Emily M. Macdonald

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

Over half of the World’s salamanders are facing extinction. It is important to understand the impact Humans have on them in all parts of their ranges so we can better understand what they need and how we can prevent further extinctions. I conducted this study to try to determine if the human activity on the official hiking trails in the Arcata Community Forest in Arcata California; as designated by the official map of the Forest; is negatively impacting the salamanders that live in the Forest. I thought there would be an increase in the number of species and the overall …

Lichens Of Iller Creek: A Checklist For The Iller Creek Unit, A Division Of Dishman Hills Conservation Area, Spokane Valley, Wa, Devin M. Mumey, Giovanna Bishop, Jessica L. Allen

2023 Symposium

The field of biodiversity documentation encompasses a broad range of research including new species discovery and description, compilation of species present in a given area, and investigation of interspecies interaction. In an era of increasingly devastating and rapid environmental change, documenting biodiversity has become increasingly important. Anthropogenic effects on urban-adjacent natural areas are especially significant, as they can cause numerous, often drastic, responses in ecosystems. Our objective here was to document the lichen biodiversity in a large urban-adjacent protected area: the Iller Creek Unit of the Dishman Hills Conservation Area in Spokane Valley, Washington. This unit encompasses a diversity of …

Developing Cryopreservation Methods Of Wheat Roots, Ramanpreet Singh, Nguyen Khoi Nguyen, Taylor S. Matteucci

2023 Symposium

In the midst of record breaking rates of plant species extinction due to climate change and fungal diseases, a universal cryopreservation method would provide a means for preservation of these many different species. The concept of plant root cryopreservation first emerged in the late 1960’s, and with it came new avenues of preserving tissue for the purposes of agriculture and research. Frozen tissues can be transported and stored more reliably than other more conventional means. When thawed, they have the potential to be cultured and grown. Several different methods of cryopreservation exist. This experiment used the Fast (3°C/minute) and Slow …

Four New State Records Of Delphacid Planthopper Species (Hemiptera: Fulgoroidea) From Illinois, Usa, Morgan E. Brown, Christopher H. Dietrich

The Great Lakes Entomologist

Four planthopper species– Aethodelphax aetocephalus (Beamer 1948), Bakerella cinerea Beamer, 1945, Bakerella minuta Beamer, 1950, and Pissonotus aphidioides Van Duzee, 1897 – are newly recorded from Illinois based on collections obtained in the summers of 2005 and 2022. Specimens were collected via net-sweeping and vacuuming of herbaceous vegetation and identified using external morphology and male genitalia morphology. Locality and collection data for each species are summarized; and relevant taxonomic and ecological information for each species is provided. Photographs of pinned specimens and male genital capsules are also provided. These new records reveal apparently disjunct populations of A. aetocephalus and B. …

Description Of The Adult Male Scorpiops Tongtongi Tang, 2022, With Further Comments On The Genus Scorpiops Peters, 1861 In China (Scorpiones: Scorpiopidae), Victoria Tang

Euscorpius

Adult male Scorpiops tongtongi Tang, 2022 is described based on recently collected specimens, which revealed a strong sexual dimorphism in the pedipalp finger lobe of this species (present in males, absent in females), lending more support to the separation from its geographic neighbors, S. jendeki Kovařík, 1994, S. shidian (Qi et al., 2005), S. zhangshuyuani Ythier, 2019, and S. beccaloniae (Kovařík, 2005). The morphological studies of Chinese Scorpiops are further discussed. A refined mensurational method of Scorpiops pedipalp chela is proposed. Morphological comparisons of both quantitative and qualitative characters for all Scorpiops from Yunnan are provided, along with a dichotomous …

Characterizing Insect Communities Within Thin-Soil Environments, Katherine Mcnamara Manning, Kayla I. Perry, Christie A. Bahlai

The Great Lakes Entomologist

Natural thin-soil environments are those which have little to no soil accumulation atop hard substrates. Many of these natural thin-soil environments, such as alvars, rocky lakeshores or glades, cliffs and cliff bluffs, and barrens, are found in the Great Lakes Region of North America. Due to their ubiquity and ecosystem services they provide, characterizing insects in sensitive environments such as these is important. This study monitored insects in nine thin-soil sites, within three regions, on a 630 km latitudinal gradient in the Southeastern Great Lakes Region of North America from June - August 2019. Over 22,000 insect specimens collected were …

Expanding The Role Of The Temporal Dimension In Ecological Niche Models: A Study On Mexican Montane Small Mammals, Gonzalo E. Pinilla Buitrago

Dissertations, Theses, and Capstone Projects

Ecological niche models (ENMs) are commonly used to estimate the potential geographic distributions of species and have various uses, such as predicting invasive species' potential distribution, assessing vulnerability to climate change, or estimating paleodistributions. However, ENM developments have primarily focused on solving spatially related issues, underemphasizing the temporal dimensionality of occurrence and environmental data collected over the last century. One limitation of ENMs is the common practice of using recent environmental averages that fail to capture the gradual environmental change over the time span of the occurrence records and can hide trends in environmental variables, a critical piece of information …

Gregarine Parasites In Zygoptera Of Keith County, Ne, Anisha Kadubandi, B. Gage Kircher Ii, Scott L. Gardner

UCARE: Research Products

Prevalence of Gregarine Protozoa Infection in Zygoptera Sourced from Varying Collection Sites in Keith County, Nebraska

B.G Kircher II, A. Kadubandi, and S.L. Gardner S. H.W. Manter Laboratory of Parasitology, University of Nebraska-Lincoln and Cedar Point Biological Station, University of Nebraska-Lincoln

Damselflies are ubiquitous flying insects of the order Odonata with thousands of species found around the world. The parasites associated with damselfly species are equally as ubiquitous, with the most common being gregarine protozoa and water mites, though other parasitic organisms such as trematodes are also found in these animals. Gaining an understanding of the relationships among hosts and …

Population Genomics, Ecology And Conservation Of Asterias Sea Stars In The North Atlantic, Melenia I. Giakoumis

Dissertations, Theses, and Capstone Projects

Uncovering how species respond to environmental change is a central question in biology (Ehrlén & Morris 2015; Habibullah et al. 2022). It is the key to elucidating the past, understanding the present and predicting the future of species’ population dynamics. This dissertation investigates the influence of environmental change on intertidal species’ distributions and genomics at several timescales, with implications for conservation.

Environmental changes have occurred throughout history, on a geological scale, and have shaped the global patterns of species’ distributions and population sizes. Biologists have long studied how geological history has shaped species distributions (Sanmartín 2012) in both terrestrial (Liu …

Remote Sensing Characterization Of Ecosystem Structure And Functional Types To Inform On Biodiversity Conservation In The Lowland Chocó Rainforest, Derek Tesser

Dissertations, Theses, and Capstone Projects

This dissertation focuses on the utilization of remote sensing techniques to characterize ecosystem structure and functional types to inform on biodiversity conservation. This work is motivated by a guiding hypothesis that increased degradation of tropical forest biodiversity due to human activity results in in measurable changes in ecosystem processes that can be detected using remote sensing technologies. Throughout this dissertation, testing of aspects of this hypothesis involve comparing areas with varying degrees of human-induced degradation in a biodiverse tropical ecoregion, the lowland Chocó rainforest of Ecuador. Remote sensing data is used to evaluate changes in vegetation structure, thermal regimes, and …