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Full-Text Articles in Biodiversity

Book Review: Habitantes De La Obscuridad (Fauna Ibero-Balear De Las Cuevas) – Inhabitants Of The Darkness (Ibero-Baleric Fauna Of Caves), Oana Teodora Moldovan Oct 2023

Book Review: Habitantes De La Obscuridad (Fauna Ibero-Balear De Las Cuevas) – Inhabitants Of The Darkness (Ibero-Baleric Fauna Of Caves), Oana Teodora Moldovan

International Journal of Speleology

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Book Review: Australian Caves And Karst Systems, John Webb, Susan White, Garry K. Smith, Jo De Waele Oct 2023

Book Review: Australian Caves And Karst Systems, John Webb, Susan White, Garry K. Smith, Jo De Waele

International Journal of Speleology

No abstract provided.


Why The Delay In Recognizing Terrestrial Obligate Cave Species In The Tropics?, Francis G. Howarth Feb 2023

Why The Delay In Recognizing Terrestrial Obligate Cave Species In The Tropics?, Francis G. Howarth

International Journal of Speleology

“Nothing could possibly live there!” They believed. Indeed, until recently, few specialized cave- adapted animals were known from volcanic, tropical, or oceanic island caves, and plausible theories had been put forward to explain their absence. But assume nothing in science! One must illuminate, explore, and survey habitats before declaring them barren. Our understanding of cave biology changed dramatically about 50 years ago following the serendipitous discovery of cave-adapted terrestrial arthropods in Brazil and on the young oceanic islands of the Galápagos and Hawai‘i. These discoveries and subsequent studies on the evolutionary ecology of cave animals have revealed a remarkable hidden …


Worldwide Distribution Of Cave-Dwelling Chelodesmidae (Diplopoda, Polydesmida), Rodrigo Salvador Bouzan, Jackson C. Means, Kaloyan Ivanov, Rodrigo L. Ferreira, Antonio Domingos Brescovit, Luiz Felipe Moretti Iniesta Dec 2022

Worldwide Distribution Of Cave-Dwelling Chelodesmidae (Diplopoda, Polydesmida), Rodrigo Salvador Bouzan, Jackson C. Means, Kaloyan Ivanov, Rodrigo L. Ferreira, Antonio Domingos Brescovit, Luiz Felipe Moretti Iniesta

International Journal of Speleology

Chelodesmidae is one of the most species rich families within the Myriapoda. However, little is known regarding their association with caves. We provide a list of all Chelodesmidae taxa reported from caves, map their worldwide distribution, and discuss the troglomorphic features of the group. A total of 25 species and subspecies from 20 genera and 2 subfamilies have been recorded from 59 caves and cave systems in 11 countries. These numbers represent a surprisingly modest proportion (~3%) of the approximately 800 described species in the family. Records of cave-dwelling chelodesmids appear to be geographically biased with most taxa reported from …


Molecular Phylogeny Of Cave Dwelling Eremogryllodes Crickets (Orthoptera, Myrmecophilidae) Across Zagros Mountains And Southern Iran, Mohadeseh Sadat Tahami, Mina Hojat-Ansari, Anna Namyatova, Saber Sadeghi Jun 2021

Molecular Phylogeny Of Cave Dwelling Eremogryllodes Crickets (Orthoptera, Myrmecophilidae) Across Zagros Mountains And Southern Iran, Mohadeseh Sadat Tahami, Mina Hojat-Ansari, Anna Namyatova, Saber Sadeghi

International Journal of Speleology

Recently, several new species and subspecies from the genus Eremogryllodes Chopard, 1929 (Insecta: Orthoptera: Myrmecophilidae) inhabiting caves of Iran, have been described based on morphology. The high variation of genitalia structure along with high similarity of external morphology between populations hamper the precise species identification. Thus, molecular approaches are critical to determine the taxonomic positions of species/subspecies of this genus. Here we provide the molecular phylogeny, based on the 16S rRNA mitochondrial gene, of recently described species of Eremogryllodes along with some unidentified specimens from the same region. The results support the monophyly of the family Myrmecophilidae. The topology of …


Protura (Arthropoda: Hexapoda) In Slovenian Caves, Loris Galli, Franc Janžekovič, Peter Kozel, Tone Novak Mar 2021

Protura (Arthropoda: Hexapoda) In Slovenian Caves, Loris Galli, Franc Janžekovič, Peter Kozel, Tone Novak

International Journal of Speleology

Protura is a small class of Hexapoda, generally poorly known, and rather scarce data on its occurrence in caves are scattered throughout literature on fauna in caves and in some papers on Protura. Although the cave-dwelling fauna is relatively well studied in Slovenia, published records on Protura are rare. In this paper, data on the occurrence and abundance of Protura in Slovenian caves are considered. Various statistical analyses were performed to compare caves with Protura to those without in 60 intensively monitored cavities to detect any differences in the selected environmental conditions. No significant difference was obtained. Samples collected from …


Microhabitat Selection Of A Sicilian Subterranean Woodlouse And Its Implications For Cave Management, Giuseppe Nicolosi, Stefano Mammola, Salvatore Costanzo, Giorgio Sabella, Rosolino Cirrincione, Giovanni Signorello, Marco Isaia Mar 2021

Microhabitat Selection Of A Sicilian Subterranean Woodlouse And Its Implications For Cave Management, Giuseppe Nicolosi, Stefano Mammola, Salvatore Costanzo, Giorgio Sabella, Rosolino Cirrincione, Giovanni Signorello, Marco Isaia

International Journal of Speleology

Human activities in subterranean environments can affect different ecosystem components, including the resident fauna. Subterranean terrestrial invertebrates are particularly sensitive to environmental change, especially microclimatic variations. For instance, microclimate modifications caused by the visitors may directly affect local fauna in caves opened to the public. However, since numerous factors act synergistically in modulating the distribution and abundance of subterranean species, it remains challenging to differentiate the impact of human intervention from that of other factors. Therefore, evidence of the impact of tourism on cave invertebrate fauna remains scarce. Over a year and with approximately two visits a month, we investigated …


The Role Of Microhabitats In Structuring Cave Invertebrate Communities In Guatemala, Gabrielle S.M. Pacheco, Marconi Souza Silva, Enio Cano, Rodrigo L. Ferreira Sep 2020

The Role Of Microhabitats In Structuring Cave Invertebrate Communities In Guatemala, Gabrielle S.M. Pacheco, Marconi Souza Silva, Enio Cano, Rodrigo L. Ferreira

International Journal of Speleology

Several studies have tried to elucidate the main environmental features driving invertebrate community structure in cave environments. They found that many factors influence the community structure, but rarely focused on how substrate types and heterogeneity might shape these communities. Therefore, the objective of this study was to assess which substrate features and whether or not substrate heterogeneity determines the invertebrate community structure (species richness and composition) in a set of limestone caves in Guatemala. We hypothesized that the troglobitic fauna responds differently to habitat structure regarding species richness and composition than non-troglobitic fauna because they are more specialized to live …


Anchialine Biodiversity In The Turks And Caicos Islands: New Discoveries And Current Faunal Composition, Brett C. Gonzalez, Alejandro Martínez, Jørgen Olesen, Sarit B. Truskey, Lauren Ballou, Marc Allentoft-Larsen, Joost Daniels, Paul Heinerth, Mark Parrish, Naqqi Manco, Jon Ward, Thomas M. Iliffe, Karen J. Osborn, Katrine Worsaae May 2020

Anchialine Biodiversity In The Turks And Caicos Islands: New Discoveries And Current Faunal Composition, Brett C. Gonzalez, Alejandro Martínez, Jørgen Olesen, Sarit B. Truskey, Lauren Ballou, Marc Allentoft-Larsen, Joost Daniels, Paul Heinerth, Mark Parrish, Naqqi Manco, Jon Ward, Thomas M. Iliffe, Karen J. Osborn, Katrine Worsaae

International Journal of Speleology

Lying at the southernmost point of the Lucayan Archipelago, the Turks and Caicos Islands are amongst the better studied localities for anchialine cave biodiversity. For nearly five decades, novel invertebrate fauna, comprised primarily of crustaceans, have been collected from these tidally influenced pools – but new findings are always on the horizon. Herein we present new records of crustaceans and annelids from anchialine blue holes and horizontal caves of the Turks and Caicos. These findings include two potentially new species of meiofaunal annelids and a new species of remipede collected from a shallow water cave pool. Our 2019 expedition additionally …


Impacts Of Invasive Rats On Hawaiian Cave Resources, Francis G. Howarth, Fred D. Stone Feb 2020

Impacts Of Invasive Rats On Hawaiian Cave Resources, Francis G. Howarth, Fred D. Stone

International Journal of Speleology

Although there are no published studies and limited data documenting damage by rodents in Hawaiian caves, our incidental observations during more than 40 years of surveying caves indicate that introduced rodents, especially the roof rat, Rattus rattus, pose significant threats to vulnerable cave resources. Caves, with their nearly constant and predictable physical environment often house important natural and cultural features including biological, paleontological, geological, climatic, mineralogical, cultural, and archaeological resources. All four invasive rodents in Hawai‘i commonly nest in cave entrances and rock shelters, but only the roof rat (Rattus rattus) habitually enters caves and utilizes areas …


Screening The Cultivable Cave Microbial Mats For The Production Of Antimicrobial Compounds And Antibiotic Resistance, Jerneja Ambrožič Avguštin, Patricia Petrič, Lejla Pašić Dec 2019

Screening The Cultivable Cave Microbial Mats For The Production Of Antimicrobial Compounds And Antibiotic Resistance, Jerneja Ambrožič Avguštin, Patricia Petrič, Lejla Pašić

International Journal of Speleology

The current work extends the phenotypic characterization of a bacterial culture collection obtained from white, yellow, grey or pink microbial cave wall colonies that are common in the caves of Slovenian Karst. We have determined antibiotic resistance to 22 natural and synthetic antibiotics in 69 isolates from the microbial mats. Thirty-eight isolates (52%) were resistant to 1-5 antibiotics; another 27 isolates (37%) were resistant to 6-10 antibiotics; and 7 isolates (0.1%) were resistant to 11-17 antibiotics. We screened for production of antimicrobial compounds by growing cave isolates on five different media and overlaying individual cultures with ten Gram-positive and Gram …


The Multifaceted Effects Induced By Floods On The Macroinvertebrate Communities Inhabiting A Sinking Cave Stream, Octavian Pacioglu, Nicoleta Ianovici, Mărioara N. Filimon, Adrian Sinitean, Gabriel Iacob, Henrietta Barabas, Alexandru Pahomi, Andrei Acs, Hanelore Muntean, Lucian Pârvulescu Jul 2019

The Multifaceted Effects Induced By Floods On The Macroinvertebrate Communities Inhabiting A Sinking Cave Stream, Octavian Pacioglu, Nicoleta Ianovici, Mărioara N. Filimon, Adrian Sinitean, Gabriel Iacob, Henrietta Barabas, Alexandru Pahomi, Andrei Acs, Hanelore Muntean, Lucian Pârvulescu

International Journal of Speleology

First-order sinking cave streams experience considerable hydrological variability, including spates and periods of base-flow during dry seasons. Early-summer flooding on a first-order stream sinking in Ciur-Ponor Cave (Romania) represented a suitable opportunity to test the response of the macroinvertebrate community and of basal food resources quantity and diversity to such a disturbance event. The invertebrate community and basal resources (i.e., woody debris, leaves, fine particulate organic matter and epilithon) were collected from three sampling sites, before and after the flood. The sampling strategy followed an up-downstream gradient of both species diversity and quantity of allochtonous organic matter decrease as the …


Species-Area Model Predicting Diversity Loss In An Artificially Flooded Cave In Brazil, Rodrigo L. Ferreira, Thais G. Pellegrini Jul 2019

Species-Area Model Predicting Diversity Loss In An Artificially Flooded Cave In Brazil, Rodrigo L. Ferreira, Thais G. Pellegrini

International Journal of Speleology

Subterranean environments are poorly known regarding many ecological aspects, such as community structure and its response to different disturbances. To estimate the effects of ground area lost in a limestone cave community in Southeastern Brazil, the invertebrate fauna was sampled before 76% of the cave floor was submerged by the filling of a hydroeletric power plant reservoir. Then, a 2-year monitoring was conducted. A species-area curve based on empiric data was constructed and the z-value of the species-area equation was calculated, what allowed estimating the expected cave richness after flooding comparing with data obtained during the monitoring. The results support …


Culture-Based Analysis Of ‘Cave Silver’ Biofilms On Rocks In The Former Homestake Mine In South Dakota, Usa, Amanpreet K. Brar, David Bergmann Jun 2019

Culture-Based Analysis Of ‘Cave Silver’ Biofilms On Rocks In The Former Homestake Mine In South Dakota, Usa, Amanpreet K. Brar, David Bergmann

International Journal of Speleology

Tunnels in a warm, humid area of the 1478 m level of the Sanford Underground Research Facility (SURF), located in a former gold mine in South Dakota, USA, host irregular, thin whitish, iridescent biofilms, which appear superficially similar to ‘cave silver’ biofilms described from limestone and lava tube caves, despite the higher rock temperature (32°C) and differing rock surface (phyllite) present at SURF. In this study, we investigated the diversity of cultivable bacteria constituting the cave silver by using several media: CN agar, CN gellan gum and 0.1X R2A agar. The highest colony count (CFU/g of sample) was observed on …


Fifty Years Of Cave Arthropod Sampling: Techniques And Best Practices, J. Judson Wynne, Francis G. Howarth, Stefan Sommer, Brett G. Dickson Feb 2019

Fifty Years Of Cave Arthropod Sampling: Techniques And Best Practices, J. Judson Wynne, Francis G. Howarth, Stefan Sommer, Brett G. Dickson

International Journal of Speleology

Ever-increasing human pressures on cave biodiversity have amplified the need for systematic, repeatable, and intensive surveys of cave-dwelling arthropods to formulate evidence-based management decisions. We examined 110 papers (from 1967 to 2018) to: (i) understand how cave-dwelling invertebrates have been sampled; (ii) provide a summary of techniques most commonly applied and appropriateness of these techniques, and; (iii) make recommendations for sampling design improvement. Of the studies reviewed, over half (56) were biological inventories, 43 ecologically focused, seven were techniques papers, and four were conservation studies. Nearly one-half (48) of the papers applied systematic techniques. Few papers (24) provided enough information …


A Unique Small-Scale Microclimatic Gradient In A Temperate Karst Harbours Exceptionally High Diversity Of Soil Collembola, Natália Raschmanová, Dana Miklisová, Ľubomír Kováč Jul 2018

A Unique Small-Scale Microclimatic Gradient In A Temperate Karst Harbours Exceptionally High Diversity Of Soil Collembola, Natália Raschmanová, Dana Miklisová, Ľubomír Kováč

International Journal of Speleology

The collapse doline of the Silická ľadnica Ice Cave, 351 m2 in area, is a unique phenomenon, a steep microclimate gradient in a low-altitude temperate karst in the Western Carpathian Mts, Slovakia, with a remarkable temperature decrease from the edge of karst plateau towards the doline bottom, which harbours perennial ice deposits. Collembola communities were studied in detail at seven sites along the 117.5 m long gradient slope during 2005–2007. An exceptionally high species richness of soil Collembola was observed, 129 species, which is about 91% of the total species richness generated by Chao1/ACE estimator. Species richness positively correlated …


Mitigating The Conflict Between Pitfall-Trap Sampling And Conservation Of Terrestrial Subterranean Communities In Caves, Peter Kozel, Tanja Pipan, Nina Šajna, Slavko Polak, Tone Novak May 2017

Mitigating The Conflict Between Pitfall-Trap Sampling And Conservation Of Terrestrial Subterranean Communities In Caves, Peter Kozel, Tanja Pipan, Nina Šajna, Slavko Polak, Tone Novak

International Journal of Speleology

Subterranean habitats are known for their rich endemic fauna and high vulnerability to disturbance. Many methods and techniques are used to sample the biodiversity of terrestrial invertebrate fauna in caves, among which pitfall trapping remains one of the most frequently used and effective ones. However, this method has turned out to be harmful to subterranean communities if applied inappropriately. Traditionally, pitfall traps have been placed in caves solely on the ground. Here we present an optimized technique of pitfall trapping to achieve a balance between sampling completeness and minimal disturbance of the fauna in the cave. Monthly we placed traps …


Diversity And Biocide Susceptibility Of Fungal Assemblages Dwelling In The Art Gallery Of Magura Cave, Bulgaria, Milena M. Mitova, Mihail Iliev, Alena Nováková, Anna A. Gorbushina, Veneta I. Groudeva, Pedro M. Martin-Sanchez Feb 2017

Diversity And Biocide Susceptibility Of Fungal Assemblages Dwelling In The Art Gallery Of Magura Cave, Bulgaria, Milena M. Mitova, Mihail Iliev, Alena Nováková, Anna A. Gorbushina, Veneta I. Groudeva, Pedro M. Martin-Sanchez

International Journal of Speleology

Magura Cave, north-western Bulgaria, possesses valuable rock-art paintings made with bat guano and dated from the period between the Eneolithic and Bronze Ages. Since 2008, the Art Gallery is closed to the general public in order to protect the paintings from vandalism, microclimatic changes caused by visitors and artificial illumination, and the consequent growth of fungi and phototrophs. Nevertheless, some tourist visits are allowed under the supervision of cave managers. This study provides the first scientific report on cultivable fungal assemblages dwelling different substrata in the Art Gallery. A total of 78 strains, belonging to 37 OTUs (Ascomycota 81%, Zygomycota …


Diversity Of Cultured Bacteria From The Perennial Ice Block Of Scarisoara Ice Cave, Romania, Corina Iţcuş, Mădălina-Denisa Pascu, Traian Brad, Aurel Perşoiu, Cristina Purcarea Jan 2016

Diversity Of Cultured Bacteria From The Perennial Ice Block Of Scarisoara Ice Cave, Romania, Corina Iţcuş, Mădălina-Denisa Pascu, Traian Brad, Aurel Perşoiu, Cristina Purcarea

International Journal of Speleology

Cave ice ecosystems represent a poorly investigated glacial environment. Diversity of cave ice bacteria and their distribution in perennial ice deposits of this underground glacial habitat could constitute a proxy for microbial response to climatic and environmental changes. Scarisoara Ice Cave (Romania) hosts one of the oldest and largest cave ice blocks worldwide. Here we report on cultured microbial diversity of recent, 400, and 900 years-old perennial ice from this cave, representing the first characterization of a chronological distribution of cave-ice bacteria. Total cell density measured by SYBR Green I epifluorescence microscopy varied in the 2.4 x 104 – …


Fungi On White-Nose Infected Bats (Myotis Spp.) In Eastern Canada Show No Decline In Diversity Associated With Pseudogymnoascus Destructans (Ascomycota: Pseudeurotiaceae), Karen J. Vanderwolf, David Malloch, Donald F. Mcalpine Dec 2015

Fungi On White-Nose Infected Bats (Myotis Spp.) In Eastern Canada Show No Decline In Diversity Associated With Pseudogymnoascus Destructans (Ascomycota: Pseudeurotiaceae), Karen J. Vanderwolf, David Malloch, Donald F. Mcalpine

International Journal of Speleology

The introduction of the fungal pathogen Pseudogymnoascus destructans (Pd) to North America has stimulated research on the poorly known mycology of caves. It is possible that the introduction of Pd reduces the diversity of fungi associated with bats hibernating in caves. To test this hypothesis we examined the fungal assemblages associated with hibernating bats (Myotis spp.) pre- and post- white-nose syndrome (WNS) infection in eastern Canada using culture-dependent methods. We found the mean number of fungal taxa isolated from bats/hibernaculum was not significantly different between pre-infection (29.6 ± 6.1SD) and post-infection with WNS (32.4 ± 4.3). Although …


Genetic Analyses Determine Connectivity Among Cave And Surface Populations Of The Jamaican Endemic Freshwater Crab Sesarma Fossarum In The Cockpit Country, Manuel Stemmer, Christoph D. Schubart Nov 2015

Genetic Analyses Determine Connectivity Among Cave And Surface Populations Of The Jamaican Endemic Freshwater Crab Sesarma Fossarum In The Cockpit Country, Manuel Stemmer, Christoph D. Schubart

International Journal of Speleology

The Jamaican freshwater crab Sesarma fossarum (Decapoda: Brachyura: Sesarmidae) is endemic to western central Jamaica where it occurs in cave and surface streams of karst regions. In the present study, we examine the population genetic structure of the species, providing evidence for intraspecific differentiation and genetic substructure among twelve sampled populations. Interestingly, crabs from caves appear genetically undistinguishable from representatives of nearby surface waters, despite previously observed and described morphometric differentiation. In contrast, genetic isolation takes place among populations from rivers and caves belonging to different watersheds. In one case, even populations from different tributaries of the same river were …


Seasonal Dynamics And Micro-Climatic Preference Of Two Alpine Endemic Hypogean Beetles, Stefano Mammola, Elena Piano, Pier Mauro Giachino, Marco Isaia Jun 2015

Seasonal Dynamics And Micro-Climatic Preference Of Two Alpine Endemic Hypogean Beetles, Stefano Mammola, Elena Piano, Pier Mauro Giachino, Marco Isaia

International Journal of Speleology

Hypogean beetles generally live in stable environments, characterized by constant temperature and high relative humidity. Changes in the underground microclimatic conditions generally induce local migrations of the beetles through the hypogean environment in search of suitable microhabitats. We studied the seasonal dynamics and the micro-climatic preference of two Alpine endemic hypogean beetles - Sphodropsis ghilianii (Coleoptera, Carabidae) and Dellabeffaella roccae (Coleoptera, Cholevidae) - in the hypogean complex of Pugnetto (Graian Alps, Italy). We surveyed the two species for one year, using baited pitfall traps and measuring temperature and humidity along the two main caves. We used logistic regression mixed models …


The Show Cave Of Diros Vs. Wild Caves Of Peloponnese, Greece - Distribution Patterns Of Cyanobacteria, Vasiliki Lamprinou, Daniel B. Danielidis, Adriani Pantazidou, Alexandra Oikonomou, Athena Economou-Amilli Jul 2014

The Show Cave Of Diros Vs. Wild Caves Of Peloponnese, Greece - Distribution Patterns Of Cyanobacteria, Vasiliki Lamprinou, Daniel B. Danielidis, Adriani Pantazidou, Alexandra Oikonomou, Athena Economou-Amilli

International Journal of Speleology

The karst cave ‘Vlychada’of Diros, one of the oldest show caves in Peloponnese, sustains extended phototrophic biofilms on various substrata – on rocks inside the cave including speleothems, and especially near the artificial lighting installation (‘Lampenflora’). After a survey of the main abiotic parameters (Photosynthetically Active Radiation -PAR, Temperature -T, Relative Humidity -RH, Carbon Dioxide -CO2) three clusters of sampling sites were revealed according to Principal Component Analysis (PCA): i) the water gallery section predominately influenced by CO2, ii) the dry passages influenced by RH and PAR, and iii) the area by the cave exit at …


Fossil Vertebrate Database From Cova Des Pas De Vallgornera (Llucmajor, Mallorca), Anna Díaz, Pere Bover, Josep Antoni Alcover May 2014

Fossil Vertebrate Database From Cova Des Pas De Vallgornera (Llucmajor, Mallorca), Anna Díaz, Pere Bover, Josep Antoni Alcover

International Journal of Speleology

The data set presented in this paper includes the fossil fauna collected in the cave named Cova des Pas de Vallgornera (CPV), located on the southern coast of Mallorca (Balearic Islands, Spain). It holds 1481 catalogued items, 97.5% identified at species level. Mammalia, Aves, Reptilia, and Amphibia are represented in the Database. The fauna collected in the cave includes the three endemic mammals present on Mallorca during the Early Pleistocene (Myotragus aff. kopperi, Hypnomys onicensis, and Nesiotites aff. ponsi). There are also represented two taxa of Chiroptera (Rhinolophus aff. mehelyi and Pipistrellus sp.), 16 taxa …


Molecular Analyses Of Microbial Abundance And Diversity In The Water Column Of Anchialine Caves In Mallorca, Spain, Damian Menning, Liana M. Boop, Elaina D. Graham, James R. Garey May 2014

Molecular Analyses Of Microbial Abundance And Diversity In The Water Column Of Anchialine Caves In Mallorca, Spain, Damian Menning, Liana M. Boop, Elaina D. Graham, James R. Garey

International Journal of Speleology

Water column samples from the island of Mallorca, Spain were collected from one site in Cova des Pas de Vallgornera (Vallgornera) and three sites (Llac Martel, Llac Negre, and Llac de les Delícies) in Coves del Drac (Drac). Vallgornera is located on the southern coast of Mallorca approximately 57 km southwest of Coves del Drac. Drac is Europe's most visited tourist cave, whereas Vallgornera is closed to the public. Water samples were analyzed for water chemistry using spectrophotometric methods, by quantitative PCR for estimated total abundance of microbial communities, and by length heterogeneity PCR for species richness and relative species …


Hypogenic Versus Epigenic Subterranean Ecosystem: Lessons From Eastern Iberian Peninsula, Alberto Sendra, Policarp Garay, Vicente M. Ortuño, José D. Gilgado, Santiago Teruel, Ana Sofia P.S. Reboleira Apr 2014

Hypogenic Versus Epigenic Subterranean Ecosystem: Lessons From Eastern Iberian Peninsula, Alberto Sendra, Policarp Garay, Vicente M. Ortuño, José D. Gilgado, Santiago Teruel, Ana Sofia P.S. Reboleira

International Journal of Speleology

Over the last 40 years, hypogenic karst/caves have become well known and hypogene speleogenesis has been used to explain the formation of some of the largest subterranean maze caves. These hypogenic systems involve confined aquifers with upwards flow, responsible for their karstification. Such spaces begun and could be remain isolated from the surface and the contiguous subterranean habitats, including the shallow ones. We studied the invertebrate fauna and the geology/speleogenesis of two recently opened caves from Eastern Iberian Peninsula, which clearly showed features of hypogenic origin. Their scarce faunistic composition, formed by non cave-adapted fauna, is similar to other hypogenic …


Diversity Of Cultivable Bacteria Involved In The Formation Of Macroscopic Microbial Colonies (Cave Silver) On The Walls Of A Cave In Slovenia, Blagajana Herzog Velikonja, Rok Tkavc, Lejla Pašić Dec 2013

Diversity Of Cultivable Bacteria Involved In The Formation Of Macroscopic Microbial Colonies (Cave Silver) On The Walls Of A Cave In Slovenia, Blagajana Herzog Velikonja, Rok Tkavc, Lejla Pašić

International Journal of Speleology

Karstic caves often support white, yellow, grey or pink microbial colonies that are termed ‘cave silver’ by speleologists. Using various sample pre-treatments and culture media, a wide variety of bacteria associated with these colonies were recovered from a cave in Slovenia, Pajsarjeva jama. Decreasing the inoculum size resulted in significant increases in viable counts, while pre-treatments had the opposite effect with the exception of microwave irradiation. While all growth media yielded viable counts, the maximal counts were observed on a low-nutrient TWA medium.

Based on the 16S rRNA gene sequence of OTU representatives, the majority of the 80 isolates examined …


Mycological Study For A Management Plan Of A Neotropical Show Cave (Brazil), Erika Linzi Silva Taylor, Maria Aparecida De Resende Stoianoff, Rodrigo Lopes Ferreira Oct 2013

Mycological Study For A Management Plan Of A Neotropical Show Cave (Brazil), Erika Linzi Silva Taylor, Maria Aparecida De Resende Stoianoff, Rodrigo Lopes Ferreira

International Journal of Speleology

Caves are stable environments with characteristics favoring the development of microorganisms. The allocthonous input of organic matter and microbes into the warm Neotropical caves may favor the development of filamentous fungi, including pathogenic species. Histoplasma capsulatum is a pathogenic species commonly found in caves and associated with bat and bird guano. Many Brazilian caves have been historically visited due to scenic and religious tourism. The objective of this study was to perform a microbiology study for a management plan of a show cave in Brazil, focusing on the presence and distribution of pathogenic and opportunistic fungi in the cave. Statistics …


Comparative Microbial Community Composition From Secondary Carbonate (Moonmilk) Deposits: Implications For The Cansiliella Servadeii Cave Hygropetric Food Web, Annette Summers Engel, Maurizio G. Paoletti, Mattia Beggio, Luca Dorigo, Alberto Pamio, Tiziano Gomiero, Claudio Furlan, Mauro Brilli, Angelo Leandro Dreon, Roberto Bertoni, Andrea Squartini Jul 2013

Comparative Microbial Community Composition From Secondary Carbonate (Moonmilk) Deposits: Implications For The Cansiliella Servadeii Cave Hygropetric Food Web, Annette Summers Engel, Maurizio G. Paoletti, Mattia Beggio, Luca Dorigo, Alberto Pamio, Tiziano Gomiero, Claudio Furlan, Mauro Brilli, Angelo Leandro Dreon, Roberto Bertoni, Andrea Squartini

International Journal of Speleology

The microbial diversity of moonmilk, a hydrated calcium carbonate speleothem, was evaluated from two Italian caves to provide context for the food web of highly-specialized troglobitic beetles, Cansiliella spp. (Leptodirinae), with distinctive carbon and nitrogen isotope values indicative of a novel food source. The moonmilk and associated percolating waters had low to no extractable chlorophyll, with an average organic C:N ratio of 9, indicating limited allochthonous input and a significant contribution from microbial biomass. The biomass from moonmilk was estimated to be ~104 micro- and meiofaunal individuals per m2 and ~107 microbial cells/ml. Betaproteobacteria dominated the …


Cure From The Cave: Volcanic Cave Actinomycetes And Their Potential In Drug Discovery, Naowarat (Ann) Cheeptham Dr., Tara Sadoway, Devon Rule, Kent Watson, Paul Moote, Laiel C. Soliman, Nicholas Azad, Kingsley Donkor, Derrick Horne Jan 2013

Cure From The Cave: Volcanic Cave Actinomycetes And Their Potential In Drug Discovery, Naowarat (Ann) Cheeptham Dr., Tara Sadoway, Devon Rule, Kent Watson, Paul Moote, Laiel C. Soliman, Nicholas Azad, Kingsley Donkor, Derrick Horne

International Journal of Speleology

Volcanic caves have been little studied for their potential as sources of novel microbial species and bioactive compounds with new scaffolds. We present the first study of volcanic cave microbiology from Canada and suggest that this habitat has great potential for the isolation of novel bioactive substances. Sample locations were plot ted on a contour map that was compiled in ArcView 3.2. Over 400 bacterial isolates were obtained from the Helmcken Falls cave in Wells Gray Provincial Park, British Columbia. From our preliminary screen, of 400 isolates tested, 1% showed activity against extended spectrum ß-lactamase E. coli, 1.75% against Escherichia …