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Full-Text Articles in Biodiversity

Further Considerations On The Species Of The Genus Orthochirus Karsch, 1891 From Africa, With Description Of Three New Species (Scorpiones: Buthidae), Wilson R. Lourenço, Elise-Anne Leguin Aug 2011

Further Considerations On The Species Of The Genus Orthochirus Karsch, 1891 From Africa, With Description Of Three New Species (Scorpiones: Buthidae), Wilson R. Lourenço, Elise-Anne Leguin

Euscorpius

New considerations are proposed regarding the African species of the genus Orthochirus Karsch, 1891. Two species, Orthochirus aristidis (Simon, 1882) and Orthochirus innesi Simon, 1910 have been the subject of several publications in the past decades; however, doubts remain about their exact identity and range of geographical distribution. In this note, their taxonomic status is reinvestigated. The type material is revised and the lectotype and paralectotypes are designated for O. aristidis. Revised diagnoses and illustrations are proposed for both species, and these are confirmed as valid. Three new species are described from Algeria, Morocco, and Mauritania. The total number …


Polymorphism And Hybridization In Species Of Hottentotta Birula, 1908 (Scorpiones: Buthidae), Wilson R. Lourenço, Eric Ythier, Mark Stockmann, John L. Cloudsley-Thompson Aug 2011

Polymorphism And Hybridization In Species Of Hottentotta Birula, 1908 (Scorpiones: Buthidae), Wilson R. Lourenço, Eric Ythier, Mark Stockmann, John L. Cloudsley-Thompson

Euscorpius

A new and well documented case of hybridization among scorpions is presented. It was obtained under laboratory conditions between Hottentotta jayakari (Pocock) and Hottentotta salei (Vachon) specimens of which had been collected in the northern and southern regions of Oman. Hybrids were successfully produced not only from F0 males and females, but also from F1 males and females, thereby attesting to the fact that the first generation obtained (F1), was completely fertile. Both F1 and F2 broods were composed of dark and pale morphs, indicating that the juveniles could inherit either one or …


Redescription Of Tityus Pictus Pocock, 1893 And Tityus Smithii Pocock, 1893, With Notes On The Tityus Species From The Lesser Antilles (Scorpiones: Buthidae), Rolando Teruel Aug 2011

Redescription Of Tityus Pictus Pocock, 1893 And Tityus Smithii Pocock, 1893, With Notes On The Tityus Species From The Lesser Antilles (Scorpiones: Buthidae), Rolando Teruel

Euscorpius

In the present paper, the taxonomic status of Tityus pictus Pocock, 1893 and all of its junior synonyms is revised. Tityus smithii Pocock, 1893 is restored as a valid species, and the subspecies Tityus smithii microdon Pocock, 1893 (currently T. pictus microdon) is regarded as its junior synonym. Both T. pictus and T. smithii are redescribed, supplementary information on their morphological variability are given, and their geographical distribution is up- dated, including a new locality record for the latter. Also, the taxonomic position and relationships of all Lesser Antillean species of the genus are clarified: it is demonstrated that …


Historical Diversification Of Montane Herpetofauna Within And Between The Sierras Of Mexico, Robert William Bryson Jr. Aug 2011

Historical Diversification Of Montane Herpetofauna Within And Between The Sierras Of Mexico, Robert William Bryson Jr.

UNLV Theses, Dissertations, Professional Papers, and Capstones

The Mexican highlands consist of four major mountain ranges spanning most of mainland Mexico. The evolutionary history of the Mexican highlands has been shaped by various geological and climatic events over the past several million years. The relative impacts of these historical events on diversification in montane taxa, however, remains uncertain. I used mitochondrial DNA data from three widely distributed species complexes of lizards as a model system to exemplify the potential roles of Neogene mountain formation and Quaternary climate change on timing and tempo of diversification across the Mexican highlands. My results suggested strong geographic partitioning of genetic variation …


Phylogeography Of A Vanishing North American Songbird: The Painted Bunting (Passerina Ciris), Connie Ann Herr Aug 2011

Phylogeography Of A Vanishing North American Songbird: The Painted Bunting (Passerina Ciris), Connie Ann Herr

UNLV Theses, Dissertations, Professional Papers, and Capstones

Studies of genetic variation within and between species can provide insights into their evolutionary history as well as important information for conserving biodiversity. An understanding of population processes can assist in the conservation of biodiversity by contrasting current versus historical patterns, and the processes that have generated these patterns. Genetic differentiation often coincides with significant geological or climatic changes that have shaped the sizes and locations of the species geographic range and altered the connectivity between populations over time. Phylogenetic and population genetic analyses can also provide a statistical framework for the investigation of how human processes such as habitat …


Survival, Breeding Frequency, And Migratory Orientation In The Jefferson Salamander, Ambystoma Jeffersonianum, Stephen P. De Lisle, Kristine L. Grayson Jul 2011

Survival, Breeding Frequency, And Migratory Orientation In The Jefferson Salamander, Ambystoma Jeffersonianum, Stephen P. De Lisle, Kristine L. Grayson

Biology Faculty Publications

Accurate estimates of demographic parameters, such as survival and breeding frequency, are necessary for the conservation and management of animal populations. Additionally, life-history data are required for gaining an empirical understanding of the ecology of natural populations. We monitored a population of Jefferson Salamanders (Ambystoma jeffersonianum) breeding in a permanent mountain-top pond at the southern limit of this species’ geographic range in Virginia over four years. We used closed multistate mark-recapture models with Pollock's robust design to estimate the demographic parameters of this population. Additionally, we used point-of-capture data to compare the orientation of migrations into and out …


Phylogeography Of The Reef Fish Cephalopholis Argus(Epinephelidae) Indicates Pleistocene Isolation Across The Indo-Pacific Barrier With Contemporary Overlap In The Coral Triangle, Michelle R. Gaither, Brian W. Bowen, Tiana-Rae Bordenave, Luiz A. Rocha, Stephen J. Newman, Juan A. Gomez, Lynne Van Herwerden, Matthew T. Craig Jul 2011

Phylogeography Of The Reef Fish Cephalopholis Argus(Epinephelidae) Indicates Pleistocene Isolation Across The Indo-Pacific Barrier With Contemporary Overlap In The Coral Triangle, Michelle R. Gaither, Brian W. Bowen, Tiana-Rae Bordenave, Luiz A. Rocha, Stephen J. Newman, Juan A. Gomez, Lynne Van Herwerden, Matthew T. Craig

Fisheries Research Articles

Background

The Coral Triangle (CT), bounded by the Philippines, the Malay Peninsula, and New Guinea, is the epicenter of marine biodiversity. Hypotheses that explain the source of this rich biodiversity include 1) the center of origin, 2) the center of accumulation, and 3) the region of overlap. Here we contribute to the debate with a phylogeographic survey of a widely distributed reef fish, the Peacock Grouper (Cephalopholis argus; Epinephelidae) at 21 locations (N = 550) using DNA sequence data from mtDNA cytochrome b and two nuclear introns (gonadotropin-releasing hormone and S7 ribosomal protein).

Results

Population structure was significant …


Redescription And Taxonomic Position Of Tityus Atriventer Pocock, 1897 (Scorpiones: Buthidae), Rolando Teruel, František Kovařík Jun 2011

Redescription And Taxonomic Position Of Tityus Atriventer Pocock, 1897 (Scorpiones: Buthidae), Rolando Teruel, František Kovařík

Euscorpius

The largely neglected Lesser Antillean scorpion Tityus atriventer Pocock, 1897 is herein redescribed, after study of the two syntypes and one additional adult male. The latter was recently collected from Union Island (about 55 km northeast of Grenada), and it implies the first published finding of this species after its original description, and the first record of the species both outside the type-locality and from the Grenadines islands. The taxonomic position of T. atriventer is clarified (including designation of a lectotype and a paralectotype), its diagnosis is updated, a fully illustrated redescription is presented according to the current taxonomy of …


Effects Of Species, Water, And Nitrogen On Competition Among Three Prairie Grasses, Jerry L. Weatherford, Randall W. Myster Jun 2011

Effects Of Species, Water, And Nitrogen On Competition Among Three Prairie Grasses, Jerry L. Weatherford, Randall W. Myster

The Prairie Naturalist

We conducted an experiment to investigate effects of species, water (W), and nitrogen (N) on competition among little bluestem (Schizachyrium scoparium), sideoats grama (Bouteloua curtipendula), and indiangrass (Sorghastrum nutans). All biomass parameters and the root:shoot ratio of little bluestem were reduced by the presence off 1 of 2 other species, and its shoot biomass and total biomass were both increased by addition of N. Root and shoot biomass of sideoats grama were reduced by the presence of indiangrass and its total biomass was reduced by the presence of itself, whereas its shoot biomass was increased by addition of W at …


Assessing The Role Of Conspecific Attraction In Habitat Restoration For Henslow’S Sparrows In Iowa, Jennifer A. Vogel, Rolf R. Koford, David L. Otis Jun 2011

Assessing The Role Of Conspecific Attraction In Habitat Restoration For Henslow’S Sparrows In Iowa, Jennifer A. Vogel, Rolf R. Koford, David L. Otis

The Prairie Naturalist

The presence of conspecific individuals may provide important cues about habitat quality for territorial songbirds. We tested the ability of a conspecific song playback system to attract Henslow’s sparrows to previously unoccupied restored habitat. We successfully attracted Heslow’s sparrows to 3 of 7 treatment plots using conspecific song playbacks and we found no Henslow’s sparrows in control plots. The addition of social cues using playback systems in restored grassland habitats may aid conservation efforts of Henslow’s sparrows to available habitat.


Notes: River Otters Use Agricultural Field Along The Turtle Riveri In Eastern North Dakota As Crossover And Latrine Area, Maggie D. Triska, Steven C. Loughry, Thomas L. Sergass Jun 2011

Notes: River Otters Use Agricultural Field Along The Turtle Riveri In Eastern North Dakota As Crossover And Latrine Area, Maggie D. Triska, Steven C. Loughry, Thomas L. Sergass

The Prairie Naturalist

Recently, the Nearctic river otter (Lontra canadensis) has been re-colonizing portions of eastern North Dakota. The landscape in eastern North Dakota is dominated by agricultural fields and pastures, habitats which have received little research attention related to otter habitat use. During 2008, we searched shorelines to detect otter latrines, which is a common method for determining otter presence. Generally, latrines are locations along bodies of water where otters deposit scats, urine, and glandular secretions for olfactory communication, and groom, wrestle, and play, which may mat vegetation. In the northeastern United States, inland riverine system studies have shown latrines …


Calodium Hepaticum In White-Tailed Jackrabbits In South Dakota, Dustin J. Schaible, Charles D. Dieter, Regg D. Neiger, Michael B. Hildreth Jun 2011

Calodium Hepaticum In White-Tailed Jackrabbits In South Dakota, Dustin J. Schaible, Charles D. Dieter, Regg D. Neiger, Michael B. Hildreth

The Prairie Naturalist

White-tailed jackrabbits (Lepus townsendii) are common on the prairie, and an important species in prairie food webs (Lim 1987). Although it has been suggested that jackrabbits have cyclic populations (Donoho 1972, Gross et al. 1974, Anderson and Shumar 1986), there is concern that a general downward trend exists in populations in the Northern Great Plains (Feldhamer et al. 2003). Disease incidence in white-tailed jackrabbits is poorly known (Feldhamer et al. 2003), but may be an important factor in population changes. Tularemia, a disease caused by bacteria (Francisella tularensis), occurs throughout the Northern Hemisphere and can affect many mammals including hares, …


Resource Selection By Elk At Two Spatial Scales In The Black Hills, South Dakota, Mark A. Rumble, R. Scott Gamo Jun 2011

Resource Selection By Elk At Two Spatial Scales In The Black Hills, South Dakota, Mark A. Rumble, R. Scott Gamo

The Prairie Naturalist

Understanding resource selection by elk (Cervus elaphus) at multiple spatial scales may provide information that will help resolve the increasing number of resource conflicts involving elk. We quantified vegetation at 412 sites where the precise location of elk was known by direct observation and 509 random sites in the Black Hills of South Dakota during 1998– 2001. We obtained stand level variables from geographic information system coverages for a 250 m buffer around elk and random sites. We used classification and regression trees to simultaneously evaluate environmental thresholds of resources selected by feeding and bedded elk at the site and …


Multiple Bats Entangled On Cactus, Jon C. Pigage, Richard L. Bunn Jun 2011

Multiple Bats Entangled On Cactus, Jon C. Pigage, Richard L. Bunn

The Prairie Naturalist

Accidental deaths of bats by entanglement on plants and barbed wire are common (McNicholl 1988, Norquay et al. 2010). It has been hypothesized these incidents involve miscalculations by bats on how close they fly to plants or barbed wire or when chasing insects highly concentrated around vegetation (Norquay et al. 2010). Once the bats hit the plants or barbed wire, they become entangled and or impaled while struggling to free themselves. The earliest reports involved little brown bats (Myotis lucifugus) and unidentified bats entangled on burdock, Arctium sp. (Lyon 1925, Little 1925). Additional reports of bats becoming entangled in plants …


First Record Of The Least Weasel In The Black Hills Of South Dakota, Tim R. Mullican Jun 2011

First Record Of The Least Weasel In The Black Hills Of South Dakota, Tim R. Mullican

The Prairie Naturalist

The least weasel (Mustela nivalis) is a circumboreal species, occurring in North America from Alaska to the Appalachian Mountains (Jones et al. 1983). In the Great Plains, the least weasel recently expanded its range southward through Nebraska (Benedict et al. 2000) and Kansas (Choate et al. 1979, Bailey and Terman 1986) into Oklahoma (Clark and Clark 1988). Also, in recent decades, the least weasel has expanded from eastern and central Nebraska into western Nebraska (Benedict et al. 2000). In South Dakota, least weasels have been previously reported from the eastern 3/4 of the state (Jones et al. 1983, Higgins et …


Phragmites Australis In South Dakota: Historical Distribution And Environment, Carol A. Johnston, Kayla L. Miller Jun 2011

Phragmites Australis In South Dakota: Historical Distribution And Environment, Carol A. Johnston, Kayla L. Miller

The Prairie Naturalist

Common reed, Phragmites australis, has long been a component of Northern Plains wetlands, but impending invasion by the non-native P. australis haplotype M may displace native haplotypes in the future. To increase understanding of historical Phragmites occurrence, we developed a geographic information system (GIS) protocol to improve the georeferencing of specimens from South Dakota herbaria, and mapped the distribution of Phragmites relative to geology, physiographic regions, and water bodies. There were 91 Phragmites herbarium specimens from South Dakota and adjacent Wyoming. Phragmites collections occurred in nearly all physiographic regions of the state, with concentrations occurring in the Prairie Coteau of …


Crustaceous Zooplankton Transfer Between A Floodplain Wetland And The Missouri River, Shannon J. Fisher Jun 2011

Crustaceous Zooplankton Transfer Between A Floodplain Wetland And The Missouri River, Shannon J. Fisher

The Prairie Naturalist

Floodplain interactions are a critical riverine ecosystem function, including zooplankton transfer. Floodplain alternations have had an assumed impact on zooplankton productivity. I assessed floodplain wetland and main channel densities of crustaceous zooplankton, alluding to organism transfer in the Missouri River, North Dakota. Significant t-test differences (P < 0.05) were present between backwater and channel habitat zooplankton densities in 83, 75, 83, and 50% of the sample periods for cyclopoid copepods, copepod nauplii, Daphnia spp., and Bosmina spp. respectively, suggesting the presence of uncoupled zooplankton dynamics during portions of each annual cycle. Two relationships with increased flows were found, including a biologically significant decrease (P = 0.09) of backwater copepod nauplii numbers and a significant increase (P = 0.02) in the channel density of Daphnia spp. During the highest flow periods, fewer significant differences in zooplankton densities were present between the backwater and channel habitats, indicating moderate homogenization.


Population Dynamics Of The Western Prickly Pear, Opuntia Macrorhiza (Cactaceae), Kathleen H. Keeler, Brigitte Tenhumberg Jun 2011

Population Dynamics Of The Western Prickly Pear, Opuntia Macrorhiza (Cactaceae), Kathleen H. Keeler, Brigitte Tenhumberg

School of Biological Sciences: Faculty Publications

Although most cacti that have been studied are long lived, following individually marked plants in Boulder County, Colorado, for >7 years, we determined that average life span of Opuntia macrorhiza, the western prickly pear, is 3 years. A few individuals probably live >10 years. Vegetative reproduction, produced by rooting of cladodes, exceeded reproduction by germination and establishment from seeds. Both types of new recruits, from vegetative reproduction and seeds, had higher death rates than established plants. Size and frequency of flowering increased with age, although size both increased and decreased, sometimes dramatically, between years. Flowering correlated more strongly with …


Habitat Selection By Female Swift Foxes (Vulpes Velox) During The Pup- Rearing Season, Indrani Sasmal, Jonathan A. Jenks, Troy W. Grovenburg, Shubham Datta, Greg. M. Schroeder, Robert W. Klaver, Kevin M. Honness Jun 2011

Habitat Selection By Female Swift Foxes (Vulpes Velox) During The Pup- Rearing Season, Indrani Sasmal, Jonathan A. Jenks, Troy W. Grovenburg, Shubham Datta, Greg. M. Schroeder, Robert W. Klaver, Kevin M. Honness

The Prairie Naturalist

The swift fox (Vulpes velox) was historically distributed in western South Dakota including the region surrounding Badlands National Park (BNP). The species declined during the mid-1800s, largely due to habitat loss and poisoning targeted at wolves (Canis lupis) and coyotes (C. latrans). Only a small population of swift foxes near Ardmore, South Dakota persisted. In 2003, an introduction program was initiated at BNP with swift foxes translocated from Colorado and Wyoming. We report on habitat use by female swift foxes during the pup-rearing season (May–July) in 2009. Analyses of location data from 13 radiomarked female foxes indicated disproportional use (P < 0.001) of some habitats relative to their availability within swift fox home ranges. Swift foxes used grassland (ŵ = 1.01), sparse vegetation (ŵ = 1.43) and prairie dog towns (ŵ = 1.18) in proportion to their availability, whereas they were less likely to use woodland (ŵ = 0.00), shrubland (ŵ = 0.14), pasture/agricultural-land (ŵ = 0.25) and development (ŵ = 0.16) relative to availability. Swift foxes typically are located in habitats that provide greater visibility, such as shortgrass prairie and areas with sparse vegetation; which allow detection of approaching coyotes (e.g., primary predator of swift foxes).


Distribution Of Crayfish Species In Select North Dakota Streams, Cari-Ann Hayer, Terrance L. Velazquez, Mclain S. Johnson, Brian Graeb Jun 2011

Distribution Of Crayfish Species In Select North Dakota Streams, Cari-Ann Hayer, Terrance L. Velazquez, Mclain S. Johnson, Brian Graeb

The Prairie Naturalist

Crayfish have an integral role in aquatic ecosystems, serving as herbivores, predators, detritivores, and prey for fishes and other aquatic and terrestrial animals (Momot 1995, Taylor et al. 1996, Martin 1997). Many crayfish populations are currently declining as a result of habitat alteration (Taylor et al. 1996) and invasive predators (e.g., rusty crayfish Orconectes rusticus [Girard; Lodge et al. 2000]). Knowledge of crayfish distribution and biology in North America and specifically North Dakota is sparse or lacking (Taylor et al. 1996) and baseline information is necessary to identify effects of anthropogenic alterations. Early inventories documented 3 crayfish species in North …


A New Species Of Vaejovis From Prescott, Arizona (Scorpiones: Vaejovidae), Richard F. Ayrey, Michael E. Soleglad May 2011

A New Species Of Vaejovis From Prescott, Arizona (Scorpiones: Vaejovidae), Richard F. Ayrey, Michael E. Soleglad

Euscorpius

A new scorpion species, Vaejovis crumpi, sp. nov., is described from Prescott, Yavapai Co., Arizona. This species is related to V. paysonensis Soleglad, 1973, and the “sky island” species of southern Arizona. V. crumpi is compared to the seven Vaejovis species currently reported for Arizona, in particular to V. paysonensis.


Wetland Management Guidelines For Nebraska's Wildlife Management Areas, Ted Lagrange, Randy Stutheit Apr 2011

Wetland Management Guidelines For Nebraska's Wildlife Management Areas, Ted Lagrange, Randy Stutheit

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

Prior to Euro-American settlement, wetlands covered about 6% of the Nebraska landscape. Since settlement, the state’s wetlands have suffered serious decline. For example, approximately 90% of Rainwater Basin playa wetlands and 90% of the eastern saline wetlands have been destroyed or are highly degraded. Remaining wetlands are threatened by conversion to other uses (e.g. agriculture), invasive and aggressive vegetation, siltation, and lack of proper management. Only through sound management can the wetlands on our Wildlife Management Areas (WMA) be preserved for the citizens of Nebraska, as well as the native plants and wildlife dependent on them.

This section is directed …


Traversing Swanton Road, 5th Ed., James A. West Apr 2011

Traversing Swanton Road, 5th Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Paradoxically, the use/abuse that the watershed has sustained over the past 140+ years, has not necessarily diminished the biodiversity and perhaps parallels the naturally disruptive but biologically energizing processes (fire, flooding, landslides and erosion), which have also been historically documented for the area for +60 years. This is an early edition of an extensive document by James A. West. Please visit the …


The Genus Butheoloides Hirst, 1925 (Scorpiones, Buthidae) In Morocco, With A Description Of А New Species, Wilson R. Lourenço, Oulaid Touloun, Ali Ali Boumezzough Apr 2011

The Genus Butheoloides Hirst, 1925 (Scorpiones, Buthidae) In Morocco, With A Description Of А New Species, Wilson R. Lourenço, Oulaid Touloun, Ali Ali Boumezzough

Euscorpius

A new species belonging to the genus Butheoloides Hirst, 1925 (subgenus Butheoloides Hirst, 1925) (Scorpiones, Buthidae) is described from two localities in Morocco: north of Sidi Ifni in the southern coast and Sidi Moussa west of Tiznit. With the description of Butheoloides (Butheoloides) littoralis sp. n., the total number of species of this genus known from Morocco is raised to five. This makes Morocco the region in Africa with the highest diversity for Butheoloides species.


Section Abstracts: Natural History And Biodiversity Apr 2011

Section Abstracts: Natural History And Biodiversity

Virginia Journal of Science

Abstracts of the Natural History and Biodiversity Section for the 89th Annual Meeting of the Virginia Academy of Science, May 25-27, 2011, University of Richmond, Richmond VA.


Review Of Nature's Ghosts: Confronting Extinction From The Age Of Jefferson To The Age Of Ecology. By Mark V. Barrow, Jr., Peter A. Bednekoff Apr 2011

Review Of Nature's Ghosts: Confronting Extinction From The Age Of Jefferson To The Age Of Ecology. By Mark V. Barrow, Jr., Peter A. Bednekoff

Great Plains Research: A Journal of Natural and Social Sciences (through 2013)

The saving of bison occupies a central place in Nature's Ghosts, but Mark Barrow's chronicle extends over a century both before and after. The story starts with Thomas Jefferson and fossils that came to be recognized as mastodons, mammoths, and giant ground sloths. "Jefferson and most of his contemporaries were certain that the natural world was orderly, static, and new." In such a worldview, extinction was unthinkable. Fossil evidence plus the historical extinctions of dodos, moas, and great auks forced reconsideration.

This book ranges across centuries and continents, and only a few parts of it are explicitly about the Great …


Wpa News 87 (2011), World Pheasant Association Apr 2011

Wpa News 87 (2011), World Pheasant Association

Galliformes Specialist Group and Affiliated Societies: Newsletters

WPA News (Springr 2011), number 87

Published by the World Pheasant Association


Draft Western Rock Lobster Fishery Environmental Management Strategy November 2010 – October 2015, Department Of Fisheries Apr 2011

Draft Western Rock Lobster Fishery Environmental Management Strategy November 2010 – October 2015, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.


Draft Genome Of The Red Harvester Ant Pogonomyrmex Barbatus, Chris R. Smith, Christopher D. Smith, Hugh M. Robertson, Martin Helmkampf, Aleksey Zimin, Mark Yandall, Carson Holt, Hao Hu, Ehab Abouheif, Richard Benton, Elizabeth Cash, Vincent Croset, Cameron R. Currie, Eran Elhaik, Christine G. Elsik, Marie-Julie Favé, Vilaiwan Fernandes, Joshua D. Gibson, Dan Graur, Wulfila Gronenberg, Kirk J. Grubbs, Darren E. Hagen, Ana Sofia Ibarraran Viniegra, Brian R. Johnson, Reed M. Johnson, Abderrahman Khila, Jay W. Kim, Kaitlyn A, Mathis, Monica C. Munoz-Torres, Marguerite C. Murphy, Julie A. Mustard, Rin Nakamura, Oliver Niehuis, Surabhi Nigam, Rick P. Overson, Jennifer E. Placek, Rajendhran Rajakumar, Justin T. Reese, Garret Suen, Shu Tao, Candice W. Torres, Neil D. Tsutsui, Lumi Viljakainen, Florian Wolschin, Jürgen Gadau Apr 2011

Draft Genome Of The Red Harvester Ant Pogonomyrmex Barbatus, Chris R. Smith, Christopher D. Smith, Hugh M. Robertson, Martin Helmkampf, Aleksey Zimin, Mark Yandall, Carson Holt, Hao Hu, Ehab Abouheif, Richard Benton, Elizabeth Cash, Vincent Croset, Cameron R. Currie, Eran Elhaik, Christine G. Elsik, Marie-Julie Favé, Vilaiwan Fernandes, Joshua D. Gibson, Dan Graur, Wulfila Gronenberg, Kirk J. Grubbs, Darren E. Hagen, Ana Sofia Ibarraran Viniegra, Brian R. Johnson, Reed M. Johnson, Abderrahman Khila, Jay W. Kim, Kaitlyn A, Mathis, Monica C. Munoz-Torres, Marguerite C. Murphy, Julie A. Mustard, Rin Nakamura, Oliver Niehuis, Surabhi Nigam, Rick P. Overson, Jennifer E. Placek, Rajendhran Rajakumar, Justin T. Reese, Garret Suen, Shu Tao, Candice W. Torres, Neil D. Tsutsui, Lumi Viljakainen, Florian Wolschin, Jürgen Gadau

Department of Entomology: Faculty Publications

We report the draft genome sequence of the red harvester ant, Pogonomyrmex barbatus. The genome was sequenced using 454 pyrosequencing, and the current assembly and annotation were completed in less than 1 y. Analyses of conserved gene groups (more than 1,200 manually annotated genes to date) suggest a high-quality assembly and annotation comparable to recently sequenced insect genomes using Sanger sequencing. The red harvester ant is a model for studying reproductive division of labor, phenotypic plasticity, and sociogenomics. Although the genome of P. barbatus is similar to other sequenced hymenopterans (Apis mellifera and Nasonia vitripennis) in …


A Molecular Phylogeny Of Living Primates, Polina L. Perelman, Warren E. Johnson, Christian Roos, Hector Seuanez, Julie E. Horvath, Miguel A. M. Moreira, Bailey Kessing, J. U. Pontius, Melody E. Roelke, Yves Rumpler, Maria P. C. Schneider, Artur Silva, Stephen J. O'Brien, Jill Pecon-Slattery Mar 2011

A Molecular Phylogeny Of Living Primates, Polina L. Perelman, Warren E. Johnson, Christian Roos, Hector Seuanez, Julie E. Horvath, Miguel A. M. Moreira, Bailey Kessing, J. U. Pontius, Melody E. Roelke, Yves Rumpler, Maria P. C. Schneider, Artur Silva, Stephen J. O'Brien, Jill Pecon-Slattery

Biology Faculty Articles

Comparative genomic analyses of primates offer considerable potential to define and understand the processes that mold, shape, and transform the human genome. However, primate taxonomy is both complex and controversial, with marginal unifying consensus of the evolutionary hierarchy of extant primate species. Here we provide new genomic sequence (~8 Mb) from 186 primates representing 61 (~90%) of the described genera, and we include outgroup species from Dermoptera, Scandentia, and Lagomorpha. The resultant phylogeny is exceptionally robust and illuminates events in primate evolution from ancient to recent, clarifying numerous taxonomic controversies and providing new data on human evolution. Ongoing speciation, reticulate …