Biodiversity Commons^™

Ethnoecological Studies Of Herbs And Shrubs Of Miani Sahib Graveyard, Lahore City, Punjab, Pakistan, Anis Ali Shah, Zaheer -Ud-Din Khan, Musarrat Ramzan, Rabia Saba

Journal of Bioresource Management

This survey was carried out to prepare a plant inventory for the exploration of the ethnobotanical importance of the plants in the Miani Sahib Graveyard and to understand the effectiveness of graveyards in conserving plant diversity. Plants were collected in different seasons of the year and were dried, pressed, mounted and identified with the help of Flora of Pakistan. Our ethnobotanical study was carried out by interviewing the herbal drug dealers, timber dealers, fuel wood sellers, and the local elderly people residing in the adjacent areas of Miani Sahib and hakims through a questionnaire. Cyperaceae was noticed as the dominant …

Management Of Sclerotium Rolfssi Through Methanolic Leaf Extract Of Alstonia Scholaris (L.) R. Br. And Azadirachta Indica L., Beenish Zia Butt, Nighat Sana, Saba Butt

Journal of Bioresource Management

Sclerotium rolfsii is a polyphagous soil borne fungus infecting more than 500 plant species across the world that is causing vast losses. Although the fungus is soil and seed borne, soil borne inoculum is most vital in infection-causing and syndrome development. Treating soil borne pathogens with fungicides is not reasonable due to very high costs. Environmental hazards are also involved. Therefore, integrated management of pathogens using biological controlling agents is the paramount alternative. Extracts of higher plants have demonstrated a wide range of activity against plant pathogenic organisms. The present research work was carried out to manage the pathogen and …

Effect Of Canopy Cover Of Capparis Decidua Forsk. On Soil Conditions In Thal Desert, Ghulam Yasin, Muhammad Farrakh Nawaz, Faiz Rasool, Muhammad Talha Bin Yousuf, Muhammad Qaisar Nazir, Atif Javed

Journal of Bioresource Management

Desert shrubs have a deep root system which allows them to explore the soil minerals and moisture from deeper horizons of soil and strongly support the local dwellers’ livelihoods. Capparis decidua (Forsk.) Edgew, generally known as karir, a xerophytic, densely branched shrub, is widely found in arid and semi-arid areas of Pakistan. The present study was conducted at four different sites in the Thal desert to determine the canopy effect of C. decidua on soil nutrients. Soil nutrients under the plant canopy (UC), at a distance of 150 cm away from the canopy (D150) and 300 cm away from the …

Microwave Assisted Extraction Of Phenolics From Trachyspermum Ammi (L.) Sprague, Sumera Javad, Maimoona Mubarik, Arusa Aftab, Amina Tariq

Journal of Bioresource Management

Trachyspermum ammi (L.) Sprague is an annual herbaceous plant belonging to the family Apiaceae and is mostly administered for stomach disorders. During the present research work, cold maceration and Microwave Assisted Extraction (MAE) of T. ammi Sprague was done by using methanol, dichloromethane and n-hexane separately as extracting solvents. For cold maceration, 2, 4, 6, 18 and 24 hours of time durations were used for each solvent. Maximum extract (50mg/g) was obtained at 18 hours of cold maceration with methanol, while maximum phenolics were also obtained from the same extract, which were calculated to be 170.89μg/g equivalent of Gallic acid. …

Evaluation Of Diver® Concentration Against Cotton Mealybug, Phenacoccus Solenopsis (Hemiptera: Pseudococcidae) And Its Parasitoid, Aenasius Bambawalei (Hymenoptera: Encyrtidae) In Laboratory, Muhammad Arfat Ashraf, Saif -Ur- Rehman, Nazeer Ahmed, Muhammad Salman Hameed, Saeed Ahmed, Zelle Huma

Journal of Bioresource Management

Bio-assay of Diver® for mealy-bug and its parasitoid, A. bambawalei, was carried out during 2010-2011 in the IPM Laboratory, Department of Agri. Entomology, University of Agriculture, Faisalabad. All the concentrations of Diver®, which were applied in laboratory conditions, were effective against mealy-bug. Diver® is the best mineral oil to control mealy-bug when compared to other synthetic pesticides. On the numerical basis of data, which were recorded on mortality basis, the highest concentration of Diver® was most effective against mealy-bug, followed by the other concentrations. All the concentrations of Diver® on the parasitoid of mealy-bug swerve less and their effects …

Impact Of Pre-Emergence Herbicides For The Control Of Weeds In Chick Pea (Cicer Arietinum L.) Under Hot Arid Climate, Ghulam Abbas, Aziz Ahmed, Marghub Amer, Zafar Abbas, Mudassir -Ur- Rehman, Aamir Hussain, Ghulam Abbas Khan

Journal of Bioresource Management

The experiments were conducted at Adaptive Research Farm Karor Lal Eason and farmers’ field, i.e. Mouza Nawan Kot, Tehsil Choubara during Rabi 2014-15. The purpose of the experiment was to evaluate the effect of different herbicides for the control of weeds on chick pea.Two pre-emergence herbicides with two different doses, viz. Pendimethalin330 EC @ 2500 ml ha-1 before sowing, Pendimethalin330 EC @ 3750 ml ha-1before sowing, Top Max 90% EC. (Metachlor 83% + Pendimethalin13%) @ 2250 ml ha-1 before sowing and TopMax 96% (Metachlor83% + 13%)@ 3350 ml ha-1, were tested. An untreated plot was also included in the experiment. …

Green Roofs And Urban Biodiversity: Their Role As Invertebrate Habitat And The Effect Of Design On Beetle Community, Sydney Marie Gonsalves

Dissertations and Theses

With over half the world's population now living in cities, urban areas represent one of earth's few ecosystems that are increasing in extent, and are sites of altered biogeochemical cycles, habitat fragmentation, and changes in biodiversity. However, urban green spaces, including green roofs, can also provide important pools of biodiversity and contribute to regional gamma diversity, while novel species assemblages can enhance some ecosystem services. Green roofs may also mitigate species loss in urban areas and have been shown to support a surprising diversity of invertebrates, including rare and endangered species. In the first part of this study I reviewed …

Neotype Designation For Scorpiops Pachmarhicus Bastawade, 1992 (Scorpiones: Euscorpiidae), With Redescription And Notes On The Species, Zeeshan A. Mirza, Gaurang Gowande

Euscorpius

Scorpiops pachmarhicus Bastawade, 1992 was described based on specimens collected from Pachmarhi, Madhya Pradesh. An expedition to the type locality led to discovery of a population at the type locality which permit us to designate a neotype for the species as types of the species are presently not traceable.

Characterization Of The Marine Sponge Amphimedon Compressa Microbiome Across A Spatial Gradient, Renee Michelle Potens

HCNSO Student Theses and Dissertations

Diverse and ecologically important microbial communities (microbiomes) are symbiotic within marine sponges. In this study, the microbiome of Amphimedon compressa from three sample locations (Broward and Dade Counties, Southeast Florida, USA and the Southern Caribbean, Bocas del Toro, Panama) is characterized using 16S rRNA Illumina sequencing. The predominant taxa are Proteobacteria and Cyanobacteria, as expected for Low Microbial Abundance sponges, accounting for over 53% of the total microbiome community. The numbers of Operational Taxonomic Units (OTUs) decrease from Broward County (2,900) to Dade County (2,300) and then Bocas del Toro (1,200). The correlates to a decreasing north-south gradient of …

Preserving Biodiversity For A Climate Change Future: A Resilience Assessment Of Three Bay Area Species--Adenostoma Fasciculatum (Chamise), Arctostaphylos Canescens (Hoary Manzanita), And Arctostaphylos Virgata (Marin Manzanita), Alison S. Pollack

Master's Projects and Capstones

Anthropogenic climate change is an undeniable threat to the future of the natural world and human civilization. These shifts will have profound impacts on vegetation, especially for species endemic to isolated regions or sensitive to climate change factors. However, species resilience can predict success into the next century. Resilience is defined as the ability to withstand climate change factors, whereas vulnerability is defined as susceptibility to climate induced stress or damage.

Chaparral and coastal scrub ecosystems within the Bay Area of California provide a unique context for examining resilience, as many species are adapted to high temperatures, drought, and wildfire—all …

The Mexican Water Forest: Benefits Of Using Remote Sensing Techniques To Assess Changes In Land Use And Land Cover, Maria F. Lopez Ornelas

Master's Projects and Capstones

In the past 30 years, anthropogenic activities like urbanization, agriculture, road fragmentation and deforestation have resulted in changes in the land use and land cover (LULC) in the Mexican Water Forest. Due to the important ecosystem services, and the natural resources this forest provides, in Mexico, it has become increasingly necessary to use new technologies and tools to support the planning, implementation and integration of forest management and conservation plans, as well as ecological and socioeconomic analysis of this ecosystem. Remote Sensing techniques and Geographic Information Systems (GIS) have been a true technological and methodological revolution in the acquisition, management …

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Daniel Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan

Selected Works Temporary Series

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, areincreasingly threatened. There is a need to accelerate collection efforts in these regionsbefore threatened or endangered species become extinct. The diverse geographical, ecological,genetic, morphological, and behavioral data generated from the on-site collection ofan individual specimen are useful for many scientific purposes. However, traditional methodsfor specimen preparation in the field do not permit researchers to retrieve neuroanatomicaldata, disregarding potentially useful data for increasing our understanding of braindiversity. These data have helped clarify brain evolution, deciphered relationships betweenstructure and function, and revealed constraints and selective pressures that provide contextabout the evolution …

Rescuing Perishable Neuroanatomical Information From A Threatened Biodiversity Hotspot: Remote Field Methods For Brain Tissue Preservation Validated By Cytoarchitectonic Analysis, Immunohistochemistry, And X-Ray Microcomputed Tomography, Hughes, Ellen Walker, Paul Gignac, Anais Martinez, Kenichiro Negishi, Carl Lieb, Eli Greenbaum, Arshad Khan

Departmental Papers (Biology)

Biodiversity hotspots, which harbor more endemic species than elsewhere on Earth, areincreasingly threatened. There is a need to accelerate collection efforts in these regionsbefore threatened or endangered species become extinct. The diverse geographical, ecological,genetic, morphological, and behavioral data generated from the on-site collection ofan individual specimen are useful for many scientific purposes. However, traditional methodsfor specimen preparation in the field do not permit researchers to retrieve neuroanatomicaldata, disregarding potentially useful data for increasing our understanding of braindiversity. These data have helped clarify brain evolution, deciphered relationships betweenstructure and function, and revealed constraints and selective pressures that provide contextabout the evolution …

Bone-Associated Gene Evolution And The Origin Of Flight In Birds, Joao P. Machado, Warren E. Johnson, M. Thomas P. Gilbert, Guojie Zhang, Erich D. Jarvis, Stephen J. O'Brien, Agostinho Antunes

Biology Faculty Articles

Background

Bones have been subjected to considerable selective pressure throughout vertebrate evolution, such as occurred during the adaptations associated with the development of powered flight. Powered flight evolved independently in two extant clades of vertebrates, birds and bats. While this trait provided advantages such as in aerial foraging habits, escape from predators or long-distance travels, it also imposed great challenges, namely in the bone structure.

Results

We performed comparative genomic analyses of 89 bone-associated genes from 47 avian genomes (including 45 new), 39 mammalian, and 20 reptilian genomes, and demonstrate that birds, after correcting for multiple testing, have an almost …

Review: Living In Obscurity: Danté Fenolio – Life In The Dark., Aldemaro Romero Jr.

Publications and Research

The reduction and/or disappearance of phenotypic features is a biological phenomenon that has intrigued humans ever since prehistoric times. The earliest known anthropological representation of a creature showing the loss of phenotypic features dates back to ca. 22,000 YBP (Upper Paleolithic). It is a carved drawing of a wingless cave cricket, Troglophilus sp., on a bison (Bison bonasus) bone found in the Grotte des Trois Frères (Three Brothers Cave) in the central Pyrénées, France. Since then, we have witnessed how the study of organisms living in lightless environments went through a number of scientific historical periods. First was the age …

Resilient Rivers Hpr 132g, Joanna Burkhardt

Library Impact Statements

No abstract provided.

Tropical Trees As Islands: Diversity Accumulation Of Armored Scale Insects (Hemiptera: Diaspididae) On Trees As A Function Of Forest Age, Hannah Shapiro

Undergraduate Honors Theses

Armored scale insects (Hemiptera: Diaspididae) are some of the most invasive insects in the world. These cryptic plant parasites are most often encountered in managed agricultural ecosystems, but very little is known about their distribution, abundance, and diversity in tropical rainforest canopies, where they are likely to have their highest diversity. Because these ubiquitous insects are extreme generalists with undirected dispersal, their diversity (alpha and beta) accumulation can conceivably be modeled according to tenets derived from island biogeography theory. For example, one expectation is that older established trees should boast a higher species diversity and abundance than younger ones. Other …

Revelation Of Yin-Yang Balance In Microbial Cell Factories By Data Mining, Flux Modeling, And Metabolic Engineering, Gang Wu

McKelvey School of Engineering Graduate Student Theses & Dissertations

The long-held assumption of never-ending rapid growth in biotechnology and especially in synthetic biology has been recently questioned, due to lack of substantial return of investment. One of the main reasons for failures in synthetic biology and metabolic engineering is the metabolic burdens that result in resource losses. Metabolic burden is defined as the portion of a host cells resources either energy molecules (e.g., NADH, NADPH and ATP) or carbon building blocks (e.g., amino acids) that is used to maintain the engineered components (e.g., pathways). As a result, the effectiveness of synthetic biology tools heavily dependents on cell capability to …

The Origin And Expansion Of The Eastern Red Fox, Adrienne Egge Kasprowicz

LSU New Orleans Theses and Dissertations

When new populations are first identified in a region there are multiple potential sources: introduction of a non-native species, extra-range expansion of a nearby population, or demographic growth of a previously unnoticed species. Red foxes were absent or rare in the mid-eastern portion United States until the late 1800s. Their origins potentially include natural population increase/expansion, translocations from Europe, and, eventually, 20th century fur farming. In this study I attempt to identify the relative impact of native expansion versus human mediated introductions of both colonial era European foxes and early 20^th century fur-farm foxes on the establishment of red …

Sensory Modalities Underlying The Escape Response Of The Cricket, Acheta Domesticus, To Looming Stimuli, Ariel M. Childs

Senior Honors Projects, 2010-2019

In order to prevent injury or capture by a predator, animals have evolved escape behavior. Despite offering a more realistic, multimodal, approximation of an approaching predator, looming stimuli have rarely been used to evoke escape behavior in crickets. Wind stimuli, however, have been used on a variety of insects, including crickets where it has been found that direction of escape is directly correlated to the angle of incoming wind stimuli. Wind stimuli are detected by sensilla trichodea, small filiform hairs covering the cerci of crickets, locusts and cockroaches. Despite having other complex sensory systems, such as antennae and vision, …

Plastic Pollution And The Global Throwaway Culture: Environmental Injustices Of Single-Use Plastic, Kristin L. Mcdermott

ENV 434 Environmental Justice

The global throwaway culture has created a cross-ecosystem plastic pollution injustice. The first to suffer this injustice will be the most vulnerable. Our oceans have become our dumpsters. The throwaway culture has created a disrespect of material goods that has turned the earth’s resources into rubbish after a single use. Eighty percent of the yearly 8 million tons of plastic that enter the ocean is single use plastic, such as plastic bottles, plastic shopping bags, or cigarette lighters.[1] Plastic has destroyed ecosystems, robbing impoverished communities of natural resources and of a healthy and safe living environment. First to suffer …

Hydroelectric Dams: The Lao Government's Luxury Trap, M.K. Laurel

ENV 434 Environmental Justice

The research of the Lao government, its hydroelectric dams, and its responses to its project was done through an environmental justice lens. It is an interdisciplinary research that explores the political corruption, the role of media, and the environment in order to frame the Lao government and the reasoning behind their unjust activities.

The Impacts Of Elephant Grazing On Plant Succession In Tropical Forests Of Africa, Nadia Swit

The Downtown Review: An Interdisciplinary Journal Written and Peer-Reviewed by Mandel Honors College Students at Cleveland State University

Succession occurs in an ecosystem when there is a change in the species structure and diversity in an ecological community over time. While this can allow for greater biodiversity, occasionally diversity can be stunted based on the level of disturbance and the invasiveness of the first pioneering species. As in the case of arrested succession, continual disturbance prohibits changes in the environment and suppresses species establishment. The effects of this continued disturbance are seen in the tropical forests in national parks in Uganda and Tanzania in Eastern Africa with African elephants (Loxodonta africana). The continuous browsing on trees …

Estimated Effects Of Climate Change On The Reproductive Fitness Of The Northern Spotted Owl, Strix Occidentalis Caurina, Nadia Swit

The Downtown Review: An Interdisciplinary Journal Written and Peer-Reviewed by Mandel Honors College Students at Cleveland State University

In this paper, the trends for current and future climate change were utilized to evaluate the potential reproductive success of the Spotted Owl, particularly the Northern Spotted Owl (Strix occidentalis caurina) subspecies. As breeding season would exert additional stressors on the animal, a time period of five months, from January to June, was selected for the spring breeding season in which to evaluate temperature change. Previous research performed by Weathers and colleagues (2001) concerning the California Owl (Strix occidentalis occidentalis) formulated a thermodynamic equation that was utilized to compare the metabolic rate of the owl at …

The Ecological Impacts Of Non-Native Species On River Otter Populations, Nadia Swit

The Downtown Review: An Interdisciplinary Journal Written and Peer-Reviewed by Mandel Honors College Students at Cleveland State University

Most nonindigenous species invasions can have negative consequences on an environment. Trophic systems may become altered as prey sources are depleted, which can have further implications on community and habitat structure. However, some species invasions can be positive as it can provide another food source for key stone species. The effects of invasive species are reviewed in the following paper for the North American river otter (Lontra canadensis) and the Eurasian otter (Lutra lutra). In the case of the North American river, the introduction of the lake trout (Salvelinus namaycush) has negatively impacted otter …

The Influence Of Beached Harmful Algal Blooms On Terrestrial Arthropods On The Shore Of Lake Erie, Nadejda Mirochnitchenko, Kevin E. Mccluney

Honors Projects

Marine primary inputs, such as sea wrack and algae, offer a great niche for insects and other animals to exploit. The existence of a similar niche on the coast of lakes has received less attention. To complicate matters, many freshwater systems are seeing increases in proliferation of toxic and non-toxic cyanobacteria blooms. This study examined patterns in lake shore terrestrial arthropod abundance, diversity, and community composition across gradients of beached algae, with varying toxicity. We detected water microcystin effects on arthropod richness in survey three, beached material effects on Shannon’s Diversity in survey two, and water microcystin effects on the …

Changes In Floristic Composition In The State Forests In Worcester County (Massachusetts) Over 34 Years, Flor A. Monroe

Sustainability and Social Justice

ABSTRACT

CHANGES IN FOREST DIVERSITY OF STATE FOREST IN WORCESTER COUNTY, MASSACHUSETTS, OVER 34 YEARS PERIOD

The forest in Massachusetts has changed since the earliest colonial settlement and today the floristic composition is more homogeneous. This study investigates the potential change in the floristic composition over thirty years in Worcester County State Forests. Shannon, richness and evenness indices for two periods were compared, and Jaccard index was used to analyze similarity in composition between the periods. The possible influence of severe weather events was also analyzed.

It was found Changes in the floristic composition, but the magnitude of the changes …

Summer 2015 Gis Analyst Internship At The Connecticut Department Of Energy & Environmental Protection, Old Lyme, Connecticut, Stuart R. Deland

Sustainability and Social Justice

I worked as the Geographic Information Systems (GIS) Internee for the Connecticut Department of Energy & Environmental Protection (CT DEEP) from May 18, 2015 through August 14th of the same year. I was stationed at the Old Lyme Field office and worked under the direct supervision of Deb Pacileo, my boss and GIS analyst for CT DEEP. My function in the agency was similar to my supervisor's as I had no single project that dominated my time, but was given a multitude of projects to create, edit, oversee, and produce. Some of these project included editing python scripts of former …

Relationships Between Nutrients, Periphyton Abundance, And Benthic Macroinvertebrate Scrapers In Ozark Highland Streams, Harrison Smith

Biological Sciences Undergraduate Honors Theses

We collected samples from seven Arkansas streams during the months of August 2014 and February 2015 with the objective of determining possible relationships between nutrients, periphyton abundance and benthic macroinvertebrates. We hypothesized that periphyton would be positively associated with nutrients, and that increases in periphyton biomass would increase the abundance and diversity of benthic scraper families. Samples were collected from three transects at each site. The periphyton was analyzed for carbon, nitrogen, phosphorus, and ash free dry mass and Chl-a content. Macroinvertebrates families belonging to the feeding group of grazers/scrapers were compared with water column and periphyton nutrient concentrations, as …

Cover Crop Mixture Diversity And Function, Angela Florence

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The objective of this study was to evaluate the effect of cover crop mixture diversity on cover crop function. Specifically, this study evaluated the effect of cover crop species and functional richness on aboveground biomass productivity, weed suppression, soil nutrient retention, soil microbial community characteristics, and performance stability. Twenty to forty cover crop treatments were replicated three to four times at eleven sites across southeastern Nebraska using a pool of eighteen species representing three cover crop species each from six pre-defined functional groups: cool-season grasses, cool-season legumes, cool-season brassicas, warm-season grasses, warm-season legumes, and warm-season broadleaves. Each species was planted …