Biodiversity Commons^™

Takeover On The Tallgrass Prairie: How Lespedeza Cuneata Establishes Dominance, Morgan Rae Walder

Theses and Dissertations

Invasion ecology aims to study mechanisms by which invasive species are able to enter, establish, and spread within an ecosystem. This study analyzed Darwin’s naturalization and the biotic resistance hypotheses as the most likely explanations for invasion by an exotic legume, Lespedeza cuneata, into a tallgrass prairie. Darwin’s naturalization hypothesis posits that exotic species are less able to establish in communities that have related species, because similarity in morphology and function promotes intense competition for resources. The biotic resistance hypothesis states that competitors, herbivores, and pathogens already present in the community limit the colonization, naturalization, and persistence of invaders, therefore …

Beyond What Is Heard: A Documentary Film About Acoustic Ecology As Sustainability Activism, Jesse Rolfe

Independent Study Project (ISP) Collection

Acoustic ecology is an interdisciplinary field that studies the relationship between sounds, sound sources, and environment they exist within. From an environmental perspective, this involves a holistic consideration of ecosystems, and how the various organisms within that ecosystem, including humans, impact and interact with each other through sound. Biosphere Soundscapes, an international, interdisciplinary project directed by Australian acoustic ecologist Dr. Leah Barclay, operates to engage communities within UNESCO Biosphere Reserves through acoustic-ecological concepts, monitoring, and techniques. In November 2016, I undertook the process of creating a short documentary film entitled Beyond What is Heard, which aimed to explore how the …

Coral Disease In Chumbe Island Coral Park: A Baseline Survey Of The Prevalence Of Coral Disease And Other Afflictions Within Chumbe Marine Protected Area, Hannah Turley

Independent Study Project (ISP) Collection

Coral mortality from disease and other afflictions is a rising concern for reefs around the world. The aim of this study was to provide to a baseline for the prevalence of coral disease and other afflictions, which indicate compromised coral health, in Chumbe Island Coral Park, Zanzibar, Tanzania. Chumbe's reef experienced a widespread bleaching event earlier this year and this baseline study will provide a starting point to see how the bleaching event affected the prevalence of disease and other afflictions within the reef. A baseline study will also allow the park to investigate if their current monitoring procedures are …

Fish Diversity And Coral Health Of Tanzania's Reefs: A Comparative Study Between The Ushongo Village Reef And The Fungu Zinga Reef Over Time, Della Turque, Corinne Casper

Independent Study Project (ISP) Collection

The world’s oceans are becoming increasing acidic due to global climate change, posing a threat to marine ecosystems, including coral carbonate systems. Environmental threats are exacerbated by human development stressors as well: growing populations, dependency on marine resources, and unsustainable practices invaluable marine ecosystems at risk. Tanzania’s coral reef system extends for 3580 km2 (Muhando et al. 2008) near the Tanga region, serving over half a million people who are highly dependent on fishing and other marine resources as their livelihoods (Samoilys et. al. 2008). With Tanzania’s population rapidly growing, the unsustainable pressure on coral reefs for sustenance and livelihood …

Cedar Waxwings, Michael L. Avery, Anthony G. Duffiney

Wildlife Damage Management Technical Series

Prevention and control of cedar waxwing (Bombycilla cedrorum) damage to small fruits such as blueberry, cherry, and strawberry is vexing to growers in many parts of the United States. Cedar waxwings (Figure 1) travel in flocks and descend in large numbers on berry crops, especially during winter and migration. In short feeding bouts, waxwings eat, peck, or knock substantial amounts of fruit from the plants. These frugivores are difficult to discourage once they become established at a given location. Harassment early and often using pyrotechnics or other sudden noisemakers can help prevent flocks from being established. The most effective preventative …

A Study Of Defensive Mechanisms Employed By Two Species Of Nudibranchs Using Toxicity And Unpalatability Analyses, Sean Youn

Independent Study Project (ISP) Collection

Nudibranchs are marine invertebrates that have developed an intriguing defense mechanism, including warning coloration and the use of chemicals accumulated through their sponge diet. The goal of this study was to determine whether the strength of chemical defenses differs between dietary and accumulated secondary metabolites for two species: Glossodoris vespa and Ceratosoma brevicaudatum. First, NMR spectroscopy was used to not only identify specific compounds in the mantle (outer covering) and the viscera (gut) but also to analyze the possibility of nudibranch species transporting more toxic compounds for defensive purposes. Next, toxicity (brine shrimp) and palatability (Palaemon shrimp) assays …

The Effects Of Sub-Lethal Predation On The Reproductive Output Of Acanthaster Planci (Crown-Of-Thorns Starfish), Emily Mucha

Independent Study Project (ISP) Collection

Wide-scale declines in live coral cover have been observed throughout history. Modern day coral populations face a multitude of environmental disturbances, however one of the most devastating to the reefs in the Indo-Pacific is the crown-of-thorns starfish (Acanthaster planci), which feeds on the tissues of live corals. The rate at which these individuals feed combined with the explosion of populations in times of outbreak have been seen to exert some of the biggest pressures on coral reefs to date. Following recent episodes of crown-of-thorns starfish (COTS) outbreaks, research on the organism has become increasingly prevalent on the scientific …

Phylogeny, Systematics And Biogeography Of Short-Tailed Opossums (Didelphidae: Monodelphis), Silvia E. Pavan

Dissertations, Theses, and Capstone Projects

Short-tailed opossums (genus Monodelphis) comprise the most species-rich genus of New World marsupials, with 25 currently recognized species. Monodelphis comprise small, terrestrial species collectively widespread in South America, which makes the group potentially informative about biogeographic processes that have shaped the continental fauna. The genus exhibits striking variation in several phenotypic characters, notably pelage coloration, behavior, and reproductive strategies. This diversity is unique among Neotropical marsupials, and makes the group particularly interesting to investigate the evolution and the adaptive significance of phenotypic trait variation. Despite this potential, missing knowledge on phylogeny and basic taxonomy precludes broader studies on evolution …

Comparative Population Genomics And Speciation Of Snakes Across The North American Deserts, Edward A. Myers

Dissertations, Theses, and Capstone Projects

Understanding the process of speciation is of central interest to evolutionary biologists. Speciation can be studied using a phylogeographic approach, by identifying regions that promote lineage divergence, addressing whether speciation has occurred with gene flow, and when extended to multiple taxa, addressing if the same patterns of speciation are shared across codistributed groups with different ecologies. Here I examine the comparative phylogeographic histories and population genomics of thirteen snake taxa that are widely distributed and co-occur across the arid southwest of North America. I first quantify the degree to which these species groups have a shared history of population divergence …

Viral Zoonoses That Fly With Bats: A Review, Alfonso Calderon, Camilo Guzman, Jorge Salazar-Bravo, Luiz Tadeu Figueiredo, Salim Mattar, German Arrieta

MANTER: Journal of Parasite Biodiversity

Emerging infectious diseases are a growing threat to human health and a great challenge for global medical attention systems. Governmental agencies in tropical regions with abundant zoonotic pathogens should implement an active vigilance/monitoring model in bat reservoir populations because of their species richness, abundance and dispersal capabilities. Chiropterans represent approximately 20% of all mammal species, the second largest order in terms of number of species after rodents. Importantly, bats constitute natural reservoirs for potential infection of humans of several infectious disease agents such as Coronavirus, Filovirus, Lyssavirus, Paramyxovirus, and Flavivirus. Local disease outbreaks caused by new pathogens can …

Traversing Swanton Road, 23rd Ed., James A. West

Academic, Government & Associated Organizational Research Resources

Situated at the northwest end of Santa Cruz County and occupying circa 30 square miles of sharply contrasted terrain, the Scott Creek Watershed concentrates within its geomorphological boundaries, at least 10-12% of California's flora, both native and introduced. Incorporated within this botanical overview but technically not part of the watershed sensustrictu, are the adjacent environs, ranging from the coastal strand up through the Western Terrace to the ocean draining ridge tops..... with the Arroyo de las Trancas/Last Chance Ridge defining the western/northwestern boundary and the Molino Creek divide, the southern demarcation. Paradoxically, the use/abuse that the watershed has sustained over …

Histomorphology Of Cutaneous Glands Associated With Conspicuous Coloration In Selected Arkansas Anurans, Christopher Shelton Thigpen

Student Theses and Dissertations

The histology and histochemistry of serous glands of Hyla chrysoscelis, H. cinerea, Lithobates palustris and L. sphenocephalus are described, herein for the first time. Light microscopy was used for examination of glands. The glands are merocrine, externally secreting and composed of a syncytium of secretory cells surrounding a central lumen bordered superficially by melanophores. Serous gland numbers were compared within individuals and between species within a genus to test for differences between skin patches and species with and without conspicuous coloration. It was hypothesized no significant differences would exist within individuals and between species of a genus. Significant differences were …

Another New Species Of Euscorpius Thorell, 1876 From The Taurus Mountains In Antalya Province, Southern Turkey (Scorpiones: Euscorpiidae), Gioele Tropea, Ersen Aydın Yağmur, Aristeidis Parmakelis, Kadir Boğaç Kunt

Euscorpius

A new scorpion species, Euscorpius alanyaensis sp. n., is described based on specimens collected from the Taurus Mountains in Antalya Province (Alanya District) in southern Turkey. It is a sibling species of the recently described E. gocmeni Tropea et al., 2014, and similarly, the new species is also characterized by a high trichobothrial count (Pv = 9–11, et = 7, em = 4, and eb = 4), a high pectinal teeth count (Dp = 9–11 in males, 8 in females), medium-small size, and light to medium brown-reddish colour. In addition, for the first time a phylogenetic …

Population Characteristics Of Human-Commensal Rodents Present In Households From Mérida, Yucatán, México, Jesús Alonso Panti-May, Silvia F. Hernández-Betancourt, Marco A. Torres-Castro, Carlos Machaín-Williams, Nohemi Cigarroa-Toledo, Lorenzo Sodá, Gabriela López-Manzanero, Josué R. Meza-Sulú, Victor M. Vidal-Martínez

MANTER: Journal of Parasite Biodiversity

Anthropocommensal rodents live in close proximity to humans in many habitats around the world. They are a threat to public health because of the pathogens they carry. Recent studies in Mérida, Yucatán, México, have shown that commensal rodents harbor potential zoonotic pathogens such as bacteria, helminths, and viruses. In this study, we describe reproductive and demographic parameters of house mice and black rats present in households from Mérida, Yucatán, México, a municipality located in a tropical region in southern México. Rodents were trapped in 142 households within the municipality of Mérida from 2011 to 2014. A total of 832 rodents …

Bibliography To Current Knowledge Of Studies Of Pathogens In Colombian Mammals, Viviana Gonzalez-Astudillo, Héctor E. Ramírez-Chaves, Joerg Henning, Thomas R. Gillespie

MANTER: Journal of Parasite Biodiversity

Mammals provide an important ecological habitat or niche space to microbial diversity, protistans (or protozoans) and metazoan parasites that can have profound effects on both human and animal health. Thus, understanding the status of mammalian species as hosts for pathogens holds relevance, especially during this time of anthropogenic environmental change. Despite the great diversity in the mammal fauna of Colombia, data in the literature on the occurrence of parasites and pathogens in these mammals are scarce and widely scattered. In order to understand the state of the knowledge of pathogens carried by wild mammals in Colombia, a systematic review of …

Current Knowledge Of Studies Of Pathogens In Colombian Mammals, Viviana Gonzalez-Astudillo, Héctor E. Ramírez-Chaves, Joerg Henning, Thomas R. Gillespie

MANTER: Journal of Parasite Biodiversity

Mammals provide an important ecological habitat or niche space to microbial diversity, protistans (or protozoans) and metazoan parasites that can have profound effects on both human and animal health. Thus, understanding the status of mammalian species as hosts for pathogens holds relevance, especially during this time of anthropogenic environmental change. Despite the great diversity in the mammal fauna of Colombia, data in the literature on the occurrence of parasites and pathogens in these mammals are scarce and widely scattered. In order to understand the state of the knowledge of pathogens carried by wild mammals in Colombia, a systematic review of …

The Importance Of Mammalogy, Infectious Disease Research, And Biosafety In The Field, Matthew R. Mauldin, Jeffrey B. Doty, Yoshinori Nakazawa, Ginny L. Emerson, Darin S. Carroll

MANTER: Journal of Parasite Biodiversity

Large amounts of data and multitudes of publications have been independently generated by researchers in mammalogy and infectious diseases. The frequent confluence of these fields in epidemiological research as well as the facility of the data generated to be used in applied methods (e.g., conservation, public outreach, public health interventions) suggests that the intersection of these fields is important not only to their committed scientists but also to other areas of investigation, including public health. Given the increased frequency with which researchers in these fields interact with potentially infected humans, animals, and tissues, their occupations present a higher risk of …

Butheoloides Grosseri Sp. N. (Scorpiones: Buthidae) From Uganda, František Kovařík

Euscorpius

A new species Butheoloides grosseri sp. n. is described and fully complemented with color photos of female holotype, as well as its habitat. This is the first species assigned to this genus from Uganda and represents southern limits of genus Butheoloides distribution.

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Viii. Pandinops Birula, 1913 (Scorpionidae), With Description Of Two New Species, František Kovařík

Euscorpius

Complete Pandinops trichobothrial pattern and spiniform formula of tarsomeres of legs are published for the first time. P. friedrichi sp. n. from Somalia and P. turieli sp. n. from Ethiopia and Kenya are described. Information is provided about all Pandinops species, their taxonomy, and distribution, and P. turieli sp. n. discovered during scorpiological expeditions in 2011–2016 is fully complemented with color photos of live and preserved specimens, as well as its habitat.

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Vii. Parabuthus Pocock, 1890 (Buthidae), With Description Of P. Hamar Sp. N. And P. Kajibu Sp. N. From Ethiopia, František Kovařík, Graeme Lowe, Jana Plíšková, František Šťáhlavský

Euscorpius

All Parabuthus species from Eritrea, Ethiopia, and Somaliland were newly collected and are revised for the first time. The complex of Parabuthus liosoma is split into three sibling species with separate areas of distribution: P. abyssinicus Pocock, 1901 (Eritrea, Djibouti, central and north-eastern parts of Ethiopia), P. liosoma (Ehrenberg, 1828) (Yemen and Saudi Arabia), and P. maximus Werner, 1913 (Tanzania and Kenya). P. hamar sp. n. and P. kajibu sp. n., discovered during scorpiological expeditions in 2011–2016, are described. Information is provided about all Parabuthus species from the Horn of Africa, their taxonomy, distribution, and ecology, fully complemented with …

Phylogenetic Relationships And Evolution Of Snakes, Alex Figueroa

LSU New Orleans Theses and Dissertations

Snakes represent an impressive evolutionary radiation of over 3,500 widely-distributed species, categorized into 515 genera, encompassing a diverse range of morphologies and ecologies. This diversity is likely attributable to their distinctive morphology, which has allowed them to populate a wide range of habitat types within most major ecosystems. In my first chapter, I provide the largest-yet estimate of the snake tree of life using maximum likelihood on a supermatrix of 1745 taxa (1652 snake species + 7 outgroup taxa) and 9,523 base pairs from 10 loci (5 nuclear, 5 mitochondrial), including previously unsequenced genera (2) and species (61). I then …

Breeding Season Avian Community Composition And Prey Availability In Eucalyptus And Slash Pine Plantations Of Southwestern Louisiana, Elizabeth J. Messick

Electronic Theses and Dissertations

The increased demand for wood products related to industries such as bioenergy and paper has resulted in a need for a consistent supply of raw materials. Eucalyptus (Eucalyptus spp.) plantations have the potential to boost wood production for pulpwood and biomass feedstocks. Species characteristics such as rapid, indeterminate growth, coppice regrowth, resistance to disease and insects, and tolerance of a range of environmental conditions make these species successful short-rotation woody crops (SRWCs). Camden white gum (Eucalyptus benthamii), a more cold tolerant species, has made management of eucalyptus plantations viable in southern portions of the United States such …

Effects Of Invasive Shrub Honeysuckle (Lonicera Maackii) And Forest Composition On Bird Communities In Woodland Stands., Katie Rae Lynch

Electronic Theses and Dissertations

Invasive species pose a threat to aquatic and terrestrial ecosystems by decreasing biodiversity (Didham et al. 2005). Amur bush honeysuckle (Lonicera maackii) has typically reduced native plant diversity and altered animal communities by influencing animal abundance and activity (Collier and Vankat 2002). This study was intended to determine whether honeysuckle density or other characteristics of forested stands influence avian diversity, whether impacts are seasonally dependent, and whether correlations exist between attributes of forested stands and honeysuckle density. In order to test the hypotheses, thirteen forest stands within the Louisville Metropolitan Area were selected. They had similar tree composition …

Guideline For Stakeholder Engagement On Aquatic Resource Management-Related Processes, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Do Novel Weapons That Degrade Mycorrhizal Mutualisms Explain Invasive Species Success?, Philip L. Pinzone Mr.

Biology Theses

Invasive plants often dominate novel habitats where they did not co-evolve with local species. Several hypotheses suggest mechanisms that explain increased exotic plant success, including 'novel weapons' and 'degraded mutualisms'. Japanese knotweed (Fallopia japonica) and European buckthorn (Rhamnus cathartica) are widespread plant invaders in North America that can dominate ecosystems. The goal of this study is to test whether these impacts are more consistent with novel weapons or degraded mutualism hypotheses. I examine tree seedling recruitment, (germination and initial survival) growth, (biomass) and mycorrhizal invasion (AMF content) as a function of F. japonica and R. cathartica …

Blackbirds, Richard A. Dolbeer, George M. Linz

Wildlife Damage Management Technical Series

The term blackbird loosely refers to a diverse group of about 10 species of North American birds that belong to the avian family Icteridae. The most common species include: Red-winged blackbird (Agelaius phoeniceus) Common grackle (Quiscalus quiscula) Great-tailed grackle (Quiscalus mexicanus) Brown-headed cowbird (Molothrus ater) Yellow-headed blackbird (Xanthocephalus xanthocephalus) Brewer’s blackbird (Euphagus cyanocephalus) Rusty blackbird (Euphagus carolinus) In addition to blackbirds, this family includes orioles, meadowlarks, and bobolinks.

Human-Wildlife Conflicts 1 Damage Identification 3 Management Methods 4 Economics 7 Species Overview 8 Legal Status 11 Glossary …

Double-Crested Cormorants, Brian S. Dorr, Kristi L. Sullivan, Paul D. Curtis, Richard Chipman, Russell D. Mccullough

Wildlife Damage Management Technical Series

The history of conflict between double-crested cormorants (Figure 1) and human interest in fisheries is long and convoluted. Following a low point in the 1970s, populations of cormorants expanded in North America, as did concerns about impacts on fisheries. By the late 1990s, natural resource agencies in 27 states reported losses of free-ranging fish stocks to cormorants. Agencies in 10 states, ranging from the Southwest to the Northeast, considered cormorant predation to be of moderate to major concern to fishery management.

Overall, double-crested cormorants are not major consumers of commercial and sportfish species. However, exceptions have been recorded at specific …

Bird Dispersal Techniques, Thomas W. Seamans, Allen L. Gosser

Wildlife Damage Management Technical Series

Conflicts between humans and birds likely have existed since agricultural practices began. Paintings from ancient Greek, Egyptian, and Roman civilizations depict birds attacking crops. In Great Britain, recording of efforts at reducing bird damage began in the 1400s, with books on bird control written in the 1600s. Even so, the problem persists. Avian damage to crops remains an issue today, but we also are concerned with damage to homes, businesses, and aircraft, and the possibility of disease transmission from birds to humans or livestock. Successful dispersal techniques should capitalize on bird sensory capabilities. If birds cannot perceive the dispersal technique, …

Geese, Ducks And Coots, John L. Cummings

Wildlife Damage Management Technical Series

Canada geese, snow geese, ducks, and American coots all have been implicated in agricultural crop and turf damage. Canada geese and snow geese that graze on winter wheat and rye crops can reduce subsequent grain and vegetative yields. Canada geese also cause serious damage to sprouting soybeans in spring and to standing cornfields in the autumn. The most common damage to agricultural resources associated with geese results from consumption of crops. Other impacts involve unacceptable accumulations of feces in pastures, trampling of emerging crops, and increased erosion and runoff from fields where the cover crop has been grazed. Canada geese …

Rare, Threatened And Endangered Species Of Oregon (2016), James S. Kagan, Sue Vrilakas, John A. Christy, Eleanor P. Gaines, Lindsey Wise, Cameron Pahl, Kathy Howell

Institute for Natural Resources Publications

Extinction is a natural process. Today, however, plant and animal species are disappearing world-wide at an accelerated pace. Based on current trends, half of the species on earth will be extinct within the next 100 years. The major reasons for this are human caused changes to the environment, which continue to increase - in Oregon and throughout the world.

Once lost, a species can never be recovered, and there is no way of knowing how useful it may have been. We do know that human beings and many of their industries depend on plant and animal products. About 50% of …