Biodiversity Commons^™

Yardwork: A Biography Of An Urban Place By Daniel Coleman, Vivian M. Hansen

The Goose

Review of Daniel Coleman's Yardwork: A Biography of an Urban Place.

Green Tea Polyphenol Epigallocatechin-3-Gallate-Stearate Inhibits The Growth Of Streptococcus Mutans: A Promising New Approach In Caries Prevention, Amy Lynn Melok, Lee Lee, Siti Ayuni Mohamed Yussof, Tinchun Chu

Department of Biology Faculty Scholarship and Creative Works

Streptococcus mutans (S. mutans) is the main etiological bacteria present in the oral cavity that leads to dental caries. All of the S. mutans in the oral cavity form biofilms that adhere to the surfaces of teeth. Dental caries are infections facilitated by the development of biofilm. An esterified derivative of epigallocatechin-3-gallate (EGCG), epigallocatechin-3-gallate-stearate (EGCG-S), was used in this study to assess its ability to inhibit the growth and biofilm formation of S. mutans. The effect of EGCG-S on bacterial growth was evaluated with colony forming units (CFU) and log reduction; biofilm formation was qualitatively determined by Congo red assay, …

Analysis Of Temperature And Salinity Effects On Growth And Mortality Of Oysters (Crassostrea Virginica) In Louisiana, Troy Sehlinger

LSU New Orleans Theses and Dissertations

Salinity (S) and temperature (T) control every facet of the eastern oyster (Crassostrea virginica) life cycle, principally reproduction, development, growth, and mortality. Previous studies conducted in in the Breton Sound (BR) and Barataria (BA) estuaries have reported differences in growth and mortality rates between the basins. In the present study, environmental conditions were synchronized to compare growth and mortality rates between basins at similar combinations of T and S. Results indicate that when T and S are the same (synchronized), seasonal oyster growth and mortality rates differ between BR and BA. Seasonal analyses revealed that as salinities increased …

Genetic Diversity In An Invasive Clonal Plant? A Historical And Contemporary Perspective, Elliot D. Weidow

LSU New Orleans Theses and Dissertations

Introduced populations of Eichhornia crassipes (Pontederiaceae) possess extremely low levels of genetic diversity due to severe bottleneck events and clonal reproduction. While populations elsewhere have been well studied, North American populations of E. crassipes remain understudied. We used Amplified Fragment Length Polymorphism markers to assess genetic diversity and population structure in North American E. crassipes populations. Patterns of diversity over the past fifty years were analyzed using herbarium specimens. Furthermore, we sampled populations across the Gulf Coast of the United States throughout a year to determine contemporary genetic diversity and assess potential seasonal effects. Genetic diversity was found to be …

2017 Annual Report, Christopher C. Witt

Annual Reports

No abstract provided.

Establishing Hematology And Serum Chemistry Reference Intervals For Wild Hawaiian Monk Seals (Neomonachus Schauinslandi), Angela C. Kaufman, Stacie J. Robinson, Dori L. Borjesson, Michelle Barbieri, Charles L. Littnan

United States Department of Commerce: Staff Publications

Hematology and serum chemistry reference intervals have been previously established for the endangered Hawaiian monk seal (Neomonachus schauinslandi) as an imperative measure for health assessments. Monitoring the health of the wild population depends upon reference intervals that are context specific; hence we developed reference intervals from fresh samples, as opposed to frozen, from wild monk seals. This study builds on the number of parameters from previous efforts by using samples collected between 2004 and 2015 from wild monk seals. Blood samples were analyzed by a single veterinary diagnostic laboratory within 24 hr of collection from apparently healthy, wild …

Impacts Of Nutrient Enrichment On Native And Non-Native Plants In Serpentine Soil, Amber R. Williams, Mary Devlin, N. Rajakaruna

STAR Program Research Presentations

Serpentine soil, derived from serpentinite, California’s state rock, is characterized by its harsh nature - due to its low levels of essential nutrients and exceptionally high levels of toxic heavy metals.In California, serpentine soils are characterized by high levels of plant endemism and rarity. Plants occurring in serpentine soil exhibit extreme tolerance of harsh soil conditions, and are typically out-competed in ‘normal’ soils due to the cost associated with physiological specialization. Atmospheric nutrient deposition is contributing to a greater invasion of non-native grass species on serpentine soils, outcompeting the native species and threatening them with local extinction. Our greenhouse study …

Biodiversity And Conservation Study Of The St. Norbert Abbey, De Pere, Wisconsin - 2017 Annual Report, Mikaela Nowak, Mackenzie Hennes, Adam L. Brandt

Student Creative and Scholarly Works

Long term biological studies are rare but incredibly valuable for examining natural phenomena. Data collected over many years or decades allows for analyses of trends that would never be apparent in a single season. The research presented here is for the completion of the first field season in a long term study analyzing biodiversity trends at the St. Norbert Abbey. Using visual searches, live trapping, and trail cameras, the biodiversity and abundance of species was examined. Special emphasis was placed on small mammals, though other species were observed and documented. The goals of this project were to (1) provide preliminary …

Crossing Corridors: Wildlife Use Of Jumpouts And Undercrossings Along A Highway With Wildlife Exclusion Fencing, Alex J. Jensen

Master's Theses

Roads pose two central problems for wildlife: wildlife-vehicle collisions (WVCs) and habitat fragmentation. Wildlife exclusion fencing can reduce WVCs but can exacerbate fragmentation. In Chapter 1, I summarize the relevant studies addressing these two problems, with a focus on large mammals in North America. Chapters 2 and 3 summarize field assessments of technologies to reduce WVCs and maintain connectivity, specifically jumpout ramps and underpasses, along Highway 101 near San Luis Obispo, CA. In a fenced highway, some animals inevitably breach the fence and become trapped, which increases the risk of a wildlife-vehicle collision. Earthen escape ramps, or “jumpouts”, can allow …

The Usefulness Of Gps Telemetry To Study Wolf Circadian And Social Activity, Samuel B. Merrill, L. David Mech

United States Geological Survey, Northern Prairie Wildlife Research Center: Publications

This study describes circadian and social movement patterns of 9 wolves and illustrates capabilities and limitations of Global Positioning System (GPS) telemetry for analysis of animal activity patterns. Wolves were studied at the Camp Ripley National Guard Training Site in Little Falls, Minnesota, and were captured via helicopter net-gunning. All study wolves showed nocturnal movement patterns regardless of time of year. One wolf's movement pattern switched to diurnal when he conducted an extraterritorial foray from his natal territory. All data sets with GPS intervals <1 hour (n=4) showed crepuscular movement peaks. We identified patterns of den visitation and attendance, estimated minimum distances traveled and minimum rates of movement, and observed that GPS location intervals may affect perceived rates of wolf travel. Global Positioning System telemetry was useful in determining when pack members were traveling together or apart and how long a breeding female wolf spent near her pups (e.g., 0-month-old pups were left unattended by their mother for as long as 17 days).

Successional Processes In The Benthic Invertebrate Communities At Gray’S Reef National Marine Sanctuary, Alexis A. Bivens

Honors College Theses

While the process of community development has been studied in terrestrial habitats since the turn of the 20th century, similar information is not as readily available in marine systems. Understanding patterns of community development is essential to predicting recovery potential and to designing effective marine protected areas. In the South Atlantic Bight, invertebrate communities on hard substrata can differ significantly from one rocky outcrop to another, but the factors driving these differences are not well understood. I documented the initial development of the benthic invertebrate community at Gray’s Reef National Marine Sanctuary (GRNMS) to address the prediction that this system …

Prioritizing Phylogenetic Diversity Captures Functional Diversity Unreliably, Florent Mazel, Matthew W. Pennell, Marc W. Cadotte, Sandra Diaz, Giulio Valentino Dalla Riva, Richard Grenyer, Fabien Leprieur, Arne O. Mooers, David Mouillot, Caroline M. Tucker, William D. Pearse

Biology Faculty Publications

In the face of the biodiversity crisis, it is argued that we should prioritize species in order to capture high functional diversity (FD). Because species traits often reflect shared evolutionary history, many researchers have assumed that maximizing phylogenetic diversity (PD) should indirectly capture FD, a hypothesis that we name the “phylogenetic gambit”. Here, we empirically test this gambit using data on ecologically relevant traits from >15,000 vertebrate species. Specifically, we estimate a measure of surrogacy of PD for FD. We find that maximizing PD results in an average gain of 18% of FD relative to random choice. However, this average …

A New Scorpion Species From Kenya, Gint Childsi Sp. N. (Scorpiones: Buthidae), Frantíšek Kovařík

Euscorpius

Gint childsi sp. n. from Kenya is described and compared with other species of the genus. Additional information is provided on the taxonomy and distribution of the genus Gint, fully complemented with color photos of preserved specimens of both sexes of the new species, as well as of their habitat.

Two New Hottentotta Species From Iran, With A Review Of Hottentotta Saulcyi (Scorpiones: Buthidae), Frantíšek Kovařík, Ersen Aydin Yağmur, Mohammed Moradi

Euscorpius

Two new buthid species from Iran, Hottentotta navidpouri sp. n. (Hormozgan Province) and H. sistanensis sp. n. (Sistan and Baluchestan Province) are described, compared with H. saulcyi (Simon, 1880), and fully illustrated with color photos. The two new species differ from H. saulcyi mainly in shape of chela, which is strongly elongated in both new species.

A New Species Of Microtityus From The British Virgin Islands, West Indies, And New Localities For Other Scorpions (Scorpiones: Buthidae, Scorpionidae), Luis F. De Armas

Euscorpius

Microtityus (Parvabsonus) eustatia sp. n. is herein described from the British Virgin Islands (West Indies): Eustatia Island (type locality), Virgin Gorda Island, and Camanoe Island, based on seven specimens (three males and four females). The new species closely resembles M. waeringi Francke & Sissom, 1980 from St. John Island and St. Thomas Island, U.S. Virgin Islands, differing mainly by the fixed finger of pedipalp having ten rows of denticles (nine in M. waeringi) and more attenuated metasoma. Also, new localities are recorded for Heteronebo yntemai Francke & Sissom, 1980 (Scorpionidae) and Centruroides griseus (C. L. Koch, 1844) …

Physiological Responses Of Species To Microclimate Help Explain Population Dynamics Along Succession In A Tropical Dry Forest Of Yucatan, Mexico, Paula C. Jackson, José Luis Andrade, Casandra Reyes-García, Olivia Hernández-González, Thomas C. Mcelroy, Roberth Us-Santamaría, José Luis Simá, Juan Manuel Dupuy

Faculty Articles

We investigated relationships between population dynamics and microclimate, physiology, and the degree of mycorrhizal colonization, for three species (Piscidia piscipula L.(Sarg.)) (Fabaceae), Bunchosia swartzianaGriseb. (Malpighiaceae) and Psidium sartorianum (Bergius) Nied. (Myrtaceae)) of a tropical sub deciduous forest in Yucatan, Mexico that were growing in plots of different successional ages. We hypothesized that abundance and persistence were related to increased plasticity in CO2assimilation. We found that Piscidia piscipula had greater abundance in intermediate plots (18 to 21 years), presented higher levels of plasticity in CO2 assimilation (greater variability among individuals, plots, and seasons), presented the highest CO2 assimilation rates, …

A Unique Small-Scale Microclimatic Gradient In A Temperate Karst Harbours Exceptionally High Diversity Of Soil Collembola, Natália Raschmanová, Dana Miklisová, Ľubomír Kováč

International Journal of Speleology

The collapse doline of the Silická ľadnica Ice Cave, 351 m² in area, is a unique phenomenon, a steep microclimate gradient in a low-altitude temperate karst in the Western Carpathian Mts, Slovakia, with a remarkable temperature decrease from the edge of karst plateau towards the doline bottom, which harbours perennial ice deposits. Collembola communities were studied in detail at seven sites along the 117.5 m long gradient slope during 2005–2007. An exceptionally high species richness of soil Collembola was observed, 129 species, which is about 91% of the total species richness generated by Chao1/ACE estimator. Species richness positively correlated …

Biodiversity And Conservation Study Of Chambers Island, Wisconsin - 2017 Annual Report, Mackenzie Hennes, Mikaela Nowak, Adam L. Brandt

Student Creative and Scholarly Works

Long term biological studies are rare but incredibly valuable for examining natural phenomena. Data collected over many years or decades allows for analyses of trends that would never be apparent in a single season. The research presented here is for the completion of the first field season in a long term study analyzing biodiversity trends on Chambers Island. Using visual searches, live trapping, and trail cameras, the biodiversity and abundance of species was examined. Special emphasis was placed on small mammals, though other species were observed and documented. The goals of this project were to (1) provide preliminary diversity and …

Mindfulness Of Minnows, Will Hollis

Masters Theses & Specialist Projects

Literature is a deeply personal and interpersonal act from the author to the reader. In some way the author is attempting to capture their interpretation of space and time inside the vehicle of language. Through metaphor and enjambment, syntax and imagery, this thesis attempts to render the contemporary experience of the artist as he is grounded in location and interpretation. The lens used in inspecting the world is biological and philosophical, seeking and hiding from the truth.

Nature and science are used as linking languages in the collections of poems, seeking to be united with emotion based in the bedrock …

Wpa News 106 (2018), World Pheasant Association

Galliformes Specialist Group and Affiliated Societies: Newsletters

WPA News (Summer 2018), number 106

Published by the World Pheasant Association

Wildlife Translocation, Michael T. Mengak

Wildlife Damage Management Technical Series

Many people enjoy wildlife. It enriches their lives in many ways. Nationwide, Americans spend over $144 billion annually on fishing, hunting, and wildlife-watching activities. However, wildlife is not always welcome in or near homes, buildings, or other property and can cause significant damage or health and safety issues (Figure 1). In one study, 42% of urban residents reported experiencing a wildlife problem during the previous year and more than half of them said their attempts to resolve the problem were unsuccessful. Many people who experience a wildlife conflict prefer to resolve the issue without harming the offending animal. Of the …

Wildlife Carcass Disposal, Stephen M. Vantassel, Mark A. King

Wildlife Damage Management Technical Series

Many wildlife management situations require the disposal of animal carcasses. These can include the lethal removal of wildlife to resolve damage or conflicts, as well as clean-up after mortalities caused by vehicle collisions, disease, oil spills (Figure 1) or other natural disasters. Carcasses must be disposed of properly to protect public sensitivities, the environment, and public health. Improper disposal of carcasses can result in public outrage, site contamination, injury to animals and people, and the attraction of other animals that may lead to wildlife damage issues. Concern over ground water contamination and disease transmission from improper carcass disposal has resulted …

Status Of Jackals And Foxes (Family: Canidae) From Selected Hill Areas Of Pakistan, Andleeb Batool, Asif Gondal, Inayat Ullah Malik, Safdar Ali Shah

Journal of Bioresource Management

The family Canidae consists of coyotes, dogs, foxes, jackals, and wolves. The IUCN red list reports 38 species under this family. This study was conducted in Azad Jammu and Kashmir, Pakistan. Conserved areas of Tolipir National Park, Banjosa Game Reserve, Pir Chanasi National Park, Pir Lasura National Park and Dhirkot Nature Reserve were studied from 2008 to 2010. Vulpes vulpes griffithi (Kashmir or hill fox) is a flexible hunter. It mainly feeds on hares, rodents, reptiles and occasionally small birds. In absence of vertebrate prey, they may subsist on insects and fruit. Canis aureus (Golden Jackal) is a very adaptable …

Biotime: A Database Of Biodiversity Time Series For The Anthropocene, Maria Dornelas, Laura H. Antão, Faye Moyes, Amanda E. Bates, Anne E. Magurran, Dušan Adams, Asem A. Akhmetzhanova, Ward Appeltans, José Manuel Adam, Frank P. Day

Biological Sciences Faculty Publications

Motivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community-led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene.

Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of 2 years, which need not necessarily be consecutive. In addition, the database contains …

Plants And Their Uses; How Communities Of Tolipir, Pakistan Get Benefit, Abu Ul Hassan Faiz, Mehboob Ul Hassan, Fida Muhammad Khan, Lariab Zahra Faiz, Hina Farooq

Journal of Bioresource Management

The present study documented ethnobotanical uses of 156 plant species belonged to 93 genera and 51 families listed from five villages of Tolipir landscape (Ali Sojhal, Kanchi Kot, Khori Chana, Kahoo Kot and Noor Kot villages). Study revealed that most of the species were used medicinally, leaves found to be the most frequently used part, for preparation of indigenous recipes and fodder purpose. The current study empirically contributes a huge chunk of ethnobotanical knowledge and depicts its strong connection with indigenous traditions. It is an urgent need to document indigenous uses of plants for future domestication.

Oaks (Family: Fagaceae) Diversity From Moist Temperate Forests Of Lesser Himalayas, Pakistan, Sher Wali, Kishwar Sultana, Fida Muhammad Khan

Journal of Bioresource Management

A detailed survey was conducted in five national parks and game reserves of Azad Jammu and Kashmir, Pakistan to assess the biodiversity of family Fagaceae. Identification of the species was done using literary sources and comparison of samples with herbaria from Quaid-i-Azam University, Islamabad and Pakistan Museum of Natural History, Islamabad, Pakistan. A total of eight different species belonging to two genera were identified, including Quercus spp., Castanea sativa, Quercus glauca, Quercus baloot, Quercus incana, Quercus velutina, Quercus alba and Quercus dilatata. The greatest biodiversity was found in Banjosa Game Reserve (BGR) and Tolipir National Park (TNP), while Pir …

Small Mammals Of Family Muridae In Protected Areas Of Pakistan, Fakhra Nazir, Andleeb Batool, Inayat Ullah Malik, Safdar Ali Shah, Sabiha Shamim

Journal of Bioresource Management

Murids to have more than 1300 species globally, forming the largest mammal group. Murids are found nearly everywhere in the world, though many subfamilies have narrower ranges. Murids are not found in Antarctica and many oceanic islands. Five National Parks from Northern areas of Pakistan were physically surveyed. The parks were studied at different times. Dhirkot National Park (DNP) in February 2008, Banjosa National Park (BJNP) from May to June 2009, Pir Lasura National Park (PLNP) from June to July 2009 and Pir Chanasi National Park (PCNP) from April to May 2010. A total of 6 species belonging to the …

Identifying Marine Key Biodiversity Areas In The Greater Caribbean Region, Michael S. Harvey

Biological Sciences Theses & Dissertations

Anthropocene biodiversity extinction rates are increasing, suggesting a possible sixth global mass extinction event. Biological conservation planners are consequently seeking ways to more effectively protect species at national, regional and global scales. In 2010, the Convention on Biological Diversity (CBD) issued a number of conservation goals (Aichi Targets), including the establishment of protected areas (PA) in terrestrial, freshwater and marine areas of eminent conservation concern by 2020 to reduce and eventually eliminate species’ extinctions, as well as preserve hotspots of biodiversity and dynamic ecosystems. While well-established, adequately enforced PAs increase the likelihood of preserving species and habitats most at risk …

Review Of Microbuthus With Description Of M. Satyrus Sp. N. (Scorpiones, Buthidae) From Oman And Yemen, Graeme Lowe, František Kovařík, Mark Stockmann, František Šťáhlavský

Euscorpius

The taxonomy of the genus Microbuthus is reviewed, and a new species from Oman and Yemen, M. satyrus sp. n., is described and fully illustrated with color photographs of live and preserved specimens, as well as of its habitat. It is compared to the closely similar species M. litoralis, which we also illustrate. Synonymy of the type species M. pusillus Kraepelin, 1898 with M. litoralis (Pavesi, 1885) is confirmed, and the species is recorded for the first time from Yemen. Hemispermatophores of M. satyrus sp. n., M. gardneri Lowe, 2010, and …

When The Cure Kills—Cbd Limits Biodiversity Research, Zhiwei Liu, Kaniyarikkal Divakaran Prathapan, Rohan Pethiyagoda, Kamaljit Bawa, Peter Raven, Priyadarsanan Rajan

Faculty Research & Creative Activity

The Convention on Biological Diversity(CBD) commits its 196 nation partiesto conserve biological diversity, useits components sustainably, and sharefairly and equitably the benefits fromthe utilization of genetic resources. Thelast of these objectives was further codifiedin the Convention’s Nagoya Protocol (NP),which came into effect in 2014. Althoughthese aspirations are laudable, the NP andresulting national ambitions on Access andBenefit Sharing (ABS) of genetic resourceshave generated several national regulatoryregimes fraught with unintended consequences(1). Anticipated benefits from thecommercial use of genetic resources, especiallythose that might flow to local or indigenouscommunities because of regulatedaccess to those resources, have largely beenexaggerated and not yet realized. Instead,national regulations …