Biodiversity Commons^™

Andean Condor Cliff And Parental Care Behavior: A Behavioral Study Of A Chick And His Free-Living Parents On The Peñón Del Isco, Ecuador, Ellie Cohn

Independent Study Project (ISP) Collection

Andean condors (Vultur gryphus) are a Near Threatened species of New World Vulture found throughout the Andes region of South America. Their population has been significantly diminished in the country of Ecuador due to threats primarily related to habitat loss and persecution by humans. High chick and juvenile mortality also threaten populations and as a result, investigation of wild Andean condors’ cliff behavior and parental care are necessary in order to develop informed and effective conservation management plans. A 22-day observational study was conducted, monitoring a known breeding pair of Andean condors and their approximately three-month-old male chick on the …

Effectiveness Of Different Agricultural Management Styles As Insect Biological Corridors: A Comparison Of Insect Populations In Fragmented Chocó Cloud Forest, Ecuador, Tara M. Krantz

Independent Study Project (ISP) Collection

Insects are part of the most diverse class of animals on the planet and are essential to various ecological functions such as pollination, nutrient cycling, providing a food source for other taxa, and more. The diversity and ecological services of insects are necessary to the operation of agriculture because of pest control and pollination of crops. However, the diversity of insects is severely reduced due to fragmentation. It is currently not well understood if certain types of agriculture can lessen the impact of fragmentation on natural and crop-based insect communities. In this study, insect populations in four different agricultural management …

Which Factors Influence The Usage And Perceptions Of Medicinal Plants In Kizanda Village (Lushoto District) And Ushongo Village (Tanga District)?, Callie Smith

Independent Study Project (ISP) Collection

The objective of this study was to compare and examine which factors impact usage and perceptions of traditional medicine in Ushongo Mtoni and Kizanda villages. More specifically, this study aimed to gain an understanding of the usages, with a specific focus on gendered usages of medicinal plants in Kizanda village and Ushongo Mtoni village and to try to examine the differences in perceptions towards traditional medicine usage in Kizanda and Ushongo. Additionally, this study aimed to determine if there are any major themes that are constant with medicinal plants in both Ushongo and Kizanda. In order to conduct this study …

Impacts Of Agricultural Practices On Soil Quality And The Resulting Soil Conservation Implication In Kizanda Village, Lushoto Region, Tanzania, Sarah Maccormick

Independent Study Project (ISP) Collection

This study examined soil conservation in Kizanda Village which is in the Lushoto District, Tanga Region in the West Usambara Mountains of Tanzania. In Tanzania, and more specifically, the rural montane area, agriculture is an important part of both social and economic development. Due to a reported high rate of land degradation in Tanzania, this development is threatened though the lack of soil conservation. This study conducted structured interviews with farmers in Kizanda through snowball sampling to collect information about local agricultural practices and farmers’ perceptions on soil conservation issues. Soil samples were then collected from the corresponding farms (n= …

Leopards Are Good To Think With: Spotting The Zanzibar Leopard In Jozani Forest, Andrew Weier

Independent Study Project (ISP) Collection

In this project, the modern narrative of the Zanzibar leopard was studied in Jozani-Chwaka Bay National Park. Game cameras were installed and various locations around the national park to try and gather primary evidence that supported the existence of a leopard population in the forest. In addition, local community members were interviewed about recent leopard related activities. No biological evidence was gathered that supported the existence of the Zanzibar leopard and information collected from interviews indicated a potential shift in which other organisms are considered leopards. Recommendations were made for future research to be able to better understand the complex …

The Diversity And Distribution Of Spiders (Arachnida: Araneae) Along An Outdoor – Indoor Habitat Gradient: Preliminary Findings From Piedmont Virginia, William Kish, Sujan Henkanaththegedara

Virginia Journal of Science

Although the United States supports a considerable diversity of spiders, some aspects of spider habitat use and niche specialization are poorly documented. Specifically, little attention has been given to explore how urban development affects the diversity and abundance of arthropods. We sampled spiders along an outdoor – indoor habitat gradient at Longwood University to understand the impact of urbanization on species diversity and abundance. We found 50 taxa of spiders belonging to 43 genera and 16 families. Overall, the most abundant spider family across three sampling sites was Araneidae (orb-weavers; 18.2%) followed by Lycosidae (wolf spiders; 14.8%), Salticidae (jumping spiders; …

Rose-Ringed Parakeets, Page E. Klug, William P. Bukoski, Aaron B. Shiels, Bryan M. Kluever, Shane R. Siers

Wildlife Damage Management Technical Series

Rose-ringed parakeets (Psittacula krameri; hereafter RRPA; Figure 1) are an invasive species in the United States, present in Alabama, Louisiana, Texas, and Virginia, and with established populations in California, Florida, and Hawaii. They are also the most successful species of invasive parakeet, worldwide. RRPA can cause significant damage to agriculture, including grains, oilseeds, fruits, and ornamental plants. Large flocks of RRPA roost near human infrastructure resulting in concerns about human health and safety (e.g., collisions with aircraft, disease transmission, feces accumulation, and noise complaints). The population growth and spread of RRPA is of conservation concern given the potential impact on …

Vulnerability And Adaptability Of Mangrove Forests On Misali Island, Zanzibar, Tanzania, Samantha A. Smith

Independent Study Project (ISP) Collection

As climate change threatens to cause heightened sea levels and decreased rainfall patterns in the Indian Ocean, mangrove forests are forced to adapt or suffer. This study aims to analyze the persistence of four prominent mangrove forests on Misali Island based on vulnerability and adaptability. The study focuses on three types of forests: overwash, coastal fringing, and scrub. Forest A, an overwash forest, was the main site of study and was surveyed for species type and seedling/sapling counts using ten transects which ranged from 40 to 91.7 meters in length. Data was analyzed in order to determine biodiversity, zonation, and …

Araneae Biodiversity In The Amazonian Foothills: An Analysis Of Family And Guild Presence Across Habitat Types, Rae Lewark

Independent Study Project (ISP) Collection

The activity of the order Araneae within ecosystems is often considered an ecological mystery. Considered top-level trophic predators, spiders act as regulators of insect populations and have influence upon the foundation of the trophic web. In the Ecuadorian Amazonian foothills, it is important to address the lack of knowledge of the biodiversity of spiders in the region. Conducting biodiversity studies across land use gradients can begin to characterize anthropogenic impacts on neotropical spider species. This study quantifies the araneae biodiversity in the transition between the Cloud and Amazon forests in Ecuador. Populations in primary forest, secondary forest, cultivated fields and …

From Traps To Snapshots: Examining The Ecology Of Feral Predators And Native Small Mammals In Southeastern Australia Through Case Studies Of Two Faunal Sampling Methods, Katherine Karson

Independent Study Project (ISP) Collection

The red fox (Vulpes vulpes) and feral cat (Felis catus) are introduced mesopredators that significantly threaten native small mammal species in Australia. For decades, environmental managers have attempted to mitigate the effects of these introduced species. However, ecosystems are highly complex, making it difficult to assess the impacts of feral predators on communities of native fauna independent of other disturbances such as fire regime and habitat fragmentation. Cost-effective ecological monitoring programs are imperative for evaluating threats to native species and informing environmental decisions. New technology has become increasingly present in wildlife monitoring, and camera trapping has provided an alternative to …

Global Conservation Status And Threat Patterns Of The World’S Most Prominent Forage Fishes (Teleostei, Clupeiformes), Tiffany L. Birge

Biological Sciences Theses & Dissertations

Conserving biodiversity is one of the greatest ethical responsibilities and challenges humans face. Understanding the conservation status of taxonomic groups provides a systematic way to prioritize efforts to combat biodiversity loss. The 405 species within the order Clupeiformes are the herrings, shads, sardines, anchovies, menhadens and relatives that include many of the most important marine forage fishes. These small, schooling fishes are economically, ecologically and culturally significant globally. Despite their contribution to global fisheries and our increasing reliance on these fishes for food and industrial commodities, they are generally poorly known with limited information regarding basic biology and population trends. …

Taxonomic Reassessment Of The Genera Lychas, Mesobuthus, And Olivierus, With Descriptions Of Four New Genera (Scorpiones: Buthidae), František Kovařík

Euscorpius

The diagnostic characters are reassessed and defined for the genera Lychas C. L. Koch, 1845, Mesobuthus Vachon, 1950, and Olivierus Farzanpay, 1987 (the latter is restored from synonymy with Mesobuthus). Four new genera are described: Aegaeobuthus gen. n. (type species Buthus gibbosus Brullé, 1832), Afrolychas gen. n. (type species Isometrus burdoi Simon, 1882), Janalychas gen. n. (type species Lychas srilankensis Lourenço, 1997), and Spelaeolychas gen. n. (type species Isometrus hosei Pocock, 1891). Type species are designated for subgenera Lychas (Distotrichus) Tikader & Bastawade, 1983 (type species Isometrus nigristernis Pocock, 1899), Lychas (Alterotrichus) Tikader & Bastawade, 1983 (type species Scorpio …

Seven New Alpine Species Of The Genus Alpiscorpius Gantenbein Et Al., 1999, Stat. N. (Scorpiones: Euscorpiidae), František Kovařík, Jana Štundlová, Victor Fet, František Šťáhlavský

Euscorpius

Two subgenera of Euscorpius Thorell, 1876 (Scorpiones: Euscorpiidae) are elevated to the genus status: Alpiscorpius Gantenbein et al., 1999, stat. n. and Tetratrichobothrius Birula, 1917, stat. n. Seven new Alpine scorpion species are described and illustrated: Alpiscorpius delta sp. n. (Italy) from the “alpha group” (“germanus complex”); A. kappa sp. n. (Slovenia) and A. lambda sp. n. (Slovenia) from the “germanus group” (“germanus complex”); A. omega sp. n. (Slovenia), A. omikron sp. n. (Slovenia), A. sigma sp. n. (Italy, Slovenia), and A. ypsilon sp. n. (Austria, Slovenia) …

Developmental And Molecular Changes Underlying The Vernalization-Induced Transition To Flowering In Aquilegia Coerulea (James), Bharti Sharma, Timothy A. Batz, Rakesh Kaundal, Elena M. Kramer, Uriah R. Sanders, Valerie J. Mellano, Naveen Duhan, Rousselene B. Larson

Center for Integrated Biosystems Publications

Reproductive success in plants is dependent on many factors but the precise timing of flowering is certainly among the most crucial. Perennial plants often have a vernalization or over-wintering requirement in order to successfully flower in the spring. The shoot apical meristem undergoes drastic developmental and molecular changes as it transitions into inflorescence meristem (IM) identity, which then gives rise to floral meristems (FMs). In this study, we have examined the developmental and gene expression changes underlying the transition from the vegetative to reproductive phases in the basal eudicot Aquilegia coerulea, which has evolved a vernalization response independently relative …

Reorganization Of Surviving Mammal Communities After The End-Pleistocene Megafaunal Extinction, Anikó B. Tóth, S. Kathleen Lyons, W. Andrew Barr, Anna K. Behrensmeyer, Jessica L. Blois, René Bobe, Matt Davis, Andrew Du, Jussi T. Eronen, J. Tyler Faith, Danielle Fraser, Nicholas J. Gotelli, Gary R. Graves, Advait M. Jukar, Joshua H. Miller, Silvia Pineda-Munoz, Laura C. Soul, Amelia Villaseñor, John Alroy

School of Biological Sciences: Faculty Publications

Large mammals are at high risk of extinction globally. To understand the consequences of their demise for community assembly, we tracked community structure through the end- Pleistocene megafaunal extinction in North America.We decomposed the effects of biotic and abiotic factors by analyzing co-occurrence within the mutual ranges of species pairs. Although shifting climate drove an increase in niche overlap, co-occurrence decreased, signaling shifts in biotic interactions. Furthermore, the effect of abiotic factors on cooccurrence remained constant over time while the effect of biotic factors decreased. Biotic factors apparently played a key role in continental-scale community assembly before the extinctions. Specifically, …

Stakeholders’ Perceptions Of Geographical Criteria For Loblolly Pine Management For Bioenergy Production In Virginia, Meghann Smith, Gia Nguyen, Taylor Wieczerak, Bernabas Wolde, Pankaj Lal, John Munsell

Department of Earth and Environmental Studies Faculty Scholarship and Creative Works

This study analyzed the perceptions of four stakeholder groups (forest landowners, private forest consultants, forest management researchers or educators, and federal or state agency foresters), regarding their management practices and preferred geographic growing conditions of loblolly pine in Virginia by combining AHP (analytical hierarchy process) and regression modeling. By ranking the importance of different geographical conditions for managing loblolly pine, we aimed to identify ways to support loblolly growth as a potential feedstock for biofuel generation. We achieved this through collecting survey responses from 43 stakeholders during the 2019 Virginia Forestry Summit. The results showed that the landowner, researcher/educator, and …

Diversity And Abundance Of Soil Microbes Differ Along A Forest-Pasture Transect, Hannah Suli, Ashley Schumann, Cleo Bickley, Jasmine Rodriguez

IdeaFest: Interdisciplinary Journal of Creative Works and Research from Cal Poly Humboldt

No abstract provided.

Information Resources For Animal Control And Wildlife Damage Management, Stephen M. Vantassel, Michael W. Fall, Serge Lariviére

Wildlife Damage Management Technical Series

A bumper sticker reads, “If you think education is expensive, you oughta try ignorance.” That statement could not be truer in regard to wildlife damage management. Being willing to learn is a critical attitude for everyone involved in wildlife damage management. Since wildlife damage management intersects so many other disciplines, no single person can be an expert in all of them. In addition, the arrival of an invasive species, changes in building practices (e.g., egress windows, ridge vents), or the implementation of new regulations can confound traditional practices and require new control methods. Thus, it is important to provide a …

Systematics Of Carex Section Laxiflorae (Cyperaceae), Jenna Dorey

Dissertations, Theses, and Capstone Projects

Carex, with more than 2100 species, is the most species-rich genus of flowering plants in temperate regions of the world. Members of the family Cyperaceae are colloquially known as sedges, and members of the genus Carex are called “true sedges.” Carex occur on every continent except for Antarctica, they thrive in a panoply of habitats, and are ecologically important as a forage source for wildlife, carbon sequestration, prevention of soil erosion, and providing habitat for fresh water invertebrates. Despite their importance many sedges are still poorly known, such as the woodland sedges in Carex section Laxiflorae, which is …

Role Of Dietary Flavonoid Compounds In Driving Patterns Of Microbial Community Assembly, Kerry L. Ivey, Andrew T. Chan, Jacques Izard, Aedin Cassidy, Geraint B. Rogers, Eric B. Rimm

Department of Food Science and Technology: Faculty Publications

Flavonoids are a group of polyphenolic dietary compounds found in many different plant-based foods. There is increasing evidence that higher flavonoid intake may be causally linked to a reduced risk of cardiovascular disease and other chronic diseases. The bioactivity and bioavailability of many dietary flavonoids can be influenced by gastrointestinal microbiome metabolism. However, the role that habitual flavonoid intake plays in shaping the human gut microbiome is poorly understood. We describe an application of an ecosystem-based analytic approach to nutritional, microbiome, and questionnaire data from a cohort of more than 240 generally healthy adult males to assess the role of …

Isolation Of Caldatribacterium (Op9) And Investigation Of Its Potential Interactions With A Novel, Co-Cultivated Thermodesulfobacterium Species, Toshio Alvarado

Electronic Theses, Projects, and Dissertations

Atribacteria (OP9), candidate phylum with no representatives in pure culture, is found in various anaerobic environments worldwide. “Caldatribacterium”, a lineage within Atribacteria that is predicted to be a strictly anaerobic sugar fermenter based on cultivation-independent genomic analyses, is currently being maintained in lab enrichment cultures with fucose as its sole growth substrate. Metagenomics and 16S rRNA gene tag sequencing indicated that the fucose culture was a co-culture of “Caldatribacterium” and an uncultivated member of the genus Thermodesulfobacterium. Due to failed attempts to isolate “Caldatribacterium” by dilution-to-extinction and plating, it was hypothesized that “Caldatribacterium” is dependent in some way on the …

Using Single-Cell Sorting, Fish And 13c-Labeling To Cultivate And Assess Carbon Substrate Utilization Of ‘Aigarchaeota’ And Other Novel Thermophiles, Damon Kurtis Mosier

Electronic Theses, Projects, and Dissertations

‘Aigarchaeota’, a deeply branching lineage in the domain Archaea with no cultivated representatives, includes both thermophilic and hyperthermophilic microorganisms that reside in terrestrial and marine geothermal environments. The ‘Aigarchaeota’ consists of at least nine proposed genus-level groups that have been confirmed via 16S rRNA sequencing, with ‘Aigarchaeota’ Group 1 (AigG1) being the focus of this study. Based on cultivation-independent genomic data available from several AigG1 members in Great Boiling Spring (GBS), NV, and Yellowstone National Park, 22 different types of growth media were designed and tested for their ability to support growth of AigG1. One of these cultures, G1-10, was …

Neotype Designation For Pectinibuthus Birulai Fet, 1984 (Scorpiones: Buthidae) From Turkmenistan, With Remarks On Pectine Teeth Of Psammophile Scorpions, Victor Fet, František Kovařík, Graeme Lowe

Euscorpius

A neotype is designated for a very rare Central Asian scorpion, Pectinibuthus birulai Fet, 1984, the sole species of the genus Pectinibuthus Fet, 1984. It is the only currently known specimen, collected by Victor Fet in July 1985, and deposited in ZISP (St. Petersburg, Russia). The original types are considered lost. Detailed photographs of the neotype are provided, as well as comments on this unique psammophile buthid. We also discuss and compare pectinal tooth counts of psammophile scorpions relative to other scorpions.

Uncovering The True Diversity Of Chanterelles In Indiana, Jairus Chittenden

The Journal of Purdue Undergraduate Research

No abstract provided.

A New Species Of Catalinia Soleglad Et Al., 2017 (Scorpiones: Vaejovidae) From Southern California, Usa, Rolando Teruel, Brandon Myers

Euscorpius

Herein we describe a new species of the vaejovid scorpion genus Catalinia Soleglad, Ayrey, Graham & Fet, 2017. It was collected in a single locality of the northwestern foothills of the Santa Ana Mountains. It is most closely related to both Catalinia andreas (Gertsch & Soleglad, 1972) and C. minima (Kraepelin, 1911), but is clearly distinguished by tegumentary sculpture, morphometric ratios and pectinal tooth counts. The new species is described and illustrated in detail, with some ecological data included; moreover, a minor correction is introduced to the diagnosis of the genus.

Factors Affecting Waterfowl Diversity At Wetland Area, Punjab (Pakistan), Zahid Bhatti, Fakhra Nazir, Inayatullah Malik

Journal of Bioresource Management

Different wetlands are being selected through WWF to improve their conditions and to create awareness about their importance in public of Pakistan. The study will help in providing sound basis for the future conservation activities and management of waterfowl population, on sounder footing. The study was conducted at Marala wetlands from October 2000 to September 2001. The State of Jammu and Kashmir lies in the north. Three rivers, i.e., Tawi, Chenab and Manawar Tawi, coming from Jammu and Kashmir, flow into Game Reserve and meet to enter the Head Marala water storage reservoir. At river Jammu Tawi, 58 species of …

Shrews From Moist Temperate Forests Of Azad Jammu And Kashmir, Andleeb Batool, Muhammad Asif Gondal, Jibran Haider

Journal of Bioresource Management

The soricidae family comprises of nearly 23 genera out of which approximately 200 species have been associated with the Eurasian region (IUCN, 1995). A lot of ambiguity surrounds this family, especially where taxonomic classification is concerned; also, not much is known about their geographic location. Five protected parks from Azad Jammu and Kashmir (AJK) were explored for population trend studies of family soricidae. Dhirkot Nature Reserve (DNR) was observed in February, 2008, Banjosa Nature Reserve (BNR) in May-June, 2009, Tolipir National Park (TNP) in April to May, 2008, Pir Chanasi National Park (PCNP) in April to May, 2010 and Pir …

Insect Diversity In Some Rural Areas District Bagh Jammu And Kashmir (Pakistan), Abu Ul Hassan Faiz, Mehboob Ul Hassan, Mikhail F Bagaturov, Ghazal Tariq, Lariab Zahra Faiz

Journal of Bioresource Management

The present study was designed to find species composition and diversity of insects in (Cultivated area, wild area, suburban) existing at different trophic level of food chain in Bagh. The study was conducted from November, 2017 to September, 2018. Fifty-two species of insects belonging to 33 families were recorded. The diversity of insects in all studied area were same but significant difference in density of insects was found.

Phytological Study Of Freshwater Wetland Ecosystem Of Bajwat Area, Zahid Bhatti, Asad Ghufran, Sher Wali Khan

Journal of Bioresource Management

Freshwater wetlands are individual ecosystems that support a variety of wildlife, vegetation and microscopic life. The type of plants that exist in these areas describe the physico-chemical characteristics of their locality and vice-versa. This study was carried out at Marala wetlands in Bajwat Game Reserve. The study found 39 species of higher plants in the areas of the wetland and its associated terrain. The total species were arranged into 5 vegetation types, named on the basis of the dominant plant species, with their own composition of the species and present in different habitat conditions. The vegetative community Phragmites karka constituted …

Integrated Pest Management In The Academic Small Greenhouse Setting: A Case Study Using Solanum Spp. (Solanaceae)., Daniel S. Hayes, Ingrid E. Jordon-Thaden, Jason T. Cantley, Angela J. Mcdonnell, Christopher T. Martine

Faculty Journal Articles

Premise

Botanical faculty and staff at academic institutions are often tasked with establishing and/or caring for plant collections held in small greenhouse facilities. Once plants are in place, an especially acute challenge is managing plant pest/pathogen populations. Integrated pest management (IPM) approaches are an excellent option, but few examples exist in the literature of successful programs that have been developed in academic small greenhouse settings.

Methods and Results

Over several years, we developed an IPM program for two small research greenhouses on the campus of a primarily undergraduate institution where hundreds of plants have been grown for studies in the …