Biodiversity Commons^™

Conservation Status And Natural History Of Ctenomys, Tuco-Tucos In Bolivia, Scott Lyell Gardner, Sebastian Botero-Cañola, Enzo Aliaga Rossel, Altangerel Tsogtsaikhan Dursahinhan, Jorge A. Salazar-Bravo

Scott L. Gardner Publications

The genus Ctenomys consists of about 70 species and in addition to the Geomyidae of the Nearctic, Neotropical tuco-tucos represent a well-documented case of diversification in the subterranean biotype. Here we will: i) Provide an updated summary of the natural history of the 12 species of extant tuco-tucos from Bolivia; ii) Update information on distributions of each species; and iii) Using ecological niche modeling, evaluate recent and projected habitat transformation or habitat degradation within the known range of each species to provide a preliminary assessment of the preservation or conservation status of ctenomyids within Bolivia. We follow Gardner et al. …

Lichens And Biofilms: Common Collective Growth Imparts Similar Developmental Strategies, Erin C. Carr, Steven D. Harris, Joshua R. Herr, Wayne Riekhof

Department of Plant Pathology: Faculty Publications

Lichens are traditionally defined as a symbiotic relationship between fungi and algae and/or cyanobacteria. This union forms a unique structure called the thallus, which attaches to surfaces such as rocks and tree bark. Recent reports challenge the view that lichens are comprised of one fungus and one photobiont, and instead suggest that they are a consortium of microbes. Much of lichen biology remains unknown as most of our knowledge of lichens is limited to morphological characteristics with little to no functional analysis of lichen genes. However, lichens and biofilms share many similar physiological traits which when compared may assist in …

Incorporation Of Summer Annual Mixtures Into Grazing Systems In Kentucky, Kelly Marie Mercier

Theses and Dissertations--Plant and Soil Sciences

Utilizing summer annual grass-legume forage mixtures has the potential to improve forage yield and nutritive characteristics, and/or animal performance during times when cool-season pasture growth is limited by high temperatures. Legumes can utilize atmospheric nitrogen, which can increase crude protein and forage digestibility in mixtures. As nitrogen application generally improves both the yield and nutritive characteristics of summer annual forages, but can have a negative effect on legume competitiveness, nitrogen fertilizer recommendations for legume-containing summer annual mixtures are not well established.

Two experiments were conducted to determine the feasibility of utilizing summer annual mixtures in Kentucky, USA. The first experiment …

Environmental Controls On The Spatial Distribution Of Greenfin Darters And Biodiversity In The Blue Ridge Mountains, Dri Tattersfield

CMC Senior Theses

Disproportionate concentrations of biodiversity in mountains worldwide suggest linkages between geologic processes and biodiversity that are not yet well understood. The Tennessee River Basin in the Blue Ridge Mountains of the southeastern U.S. is a global hotspot for freshwater fish biodiversity. To investigate drivers of biodiversity in the Tennessee River Basin, and explore links to geologic processes, I study the Greenfin Darter (Nothonotus chlorobranchius), a small fish endemic to the upper Tennessee River Basin. I use generalized linear models (GLMs) to evaluate the influence of topography, lithology, climate and land use on the distribution of the Greenfin Darter, …

Plant Communities In Dynamic Systems: How Disturbance Influences Coastal Plant Community Structure And Function, Joseph K. Brown

Theses and Dissertations

As the climate continues to change it is difficult to predict how barrier island function will respond to global change drivers accompanying predicted climate change. Disturbance frequency and nutrient enrichment in coastal regions are drivers of plant community change that increase with climate change. Plant communities on barrier islands are not only tightly connected to barrier island function but are also some of the first communities affected by environmental change, making them a critical piece in understanding how current drivers of global change will impact the future of barrier islands. The objective of my dissertation was to observe and manipulate …

Alfred Russel Wallace Notes 8: Wallace's Earliest Exposures To The Writings Of Alexander Von Humboldt, Charles H. Smith

Faculty/Staff Personal Papers

For many years it has been known that the German geographer and naturalist Alexander von Humboldt (1769-1859) exercised a considerable influence on Alfred Russel Wallace’s (1823-1913) decision to become a travelling naturalist. Almost no attention, however, has been given to the real possibility that von Humboldt exerted an even greater influence on Wallace’s general worldview. In this note, Wallace’s probable earliest contacts with von Humboldt’s writings are described.

A Reintroduction Retrospective: Comparative Fisher (Pekania Pennanti) Survival And Prey Habitat Use In The Cascade Mountains Of Washington State, Tanner S.T. Humphries

Graduate Student Theses, Dissertations, & Professional Papers

Increasing human impacts on biodiversity highlight the global need for ecological restoration. For many wildlife species, reintroduction is necessary to re-establish populations in parts of their historic range where they have been extirpated. Reintroduction efforts are commonly used to help restore ecosystem integrity, but are often expensive, time consuming, and unsuccessful at generating self-sustaining populations. Thus, a more complete understanding of the factors affecting restoration success is important for ensuring successful outcomes and responsible stewardship. Fishers (Pekania pennanti) are one of the most commonly reintroduced carnivores in North America, but the success of such efforts is highly variable, …

The Conservation Status Of Marine Biodiversity Of The Western Indian Ocean, R. Bullock, Gina Ralph, E. Stump, F. Al Abdali, J. Al Asfoor, B. Al Buwaiqi, A. Al Kindi, A. Ambuali, Tiffany Birge, P. Borsa, F. Di Dario, B. Everett, S. Fennessy, C. Fonseca, Claire Gorman, A. Govender, H. Ho, W. Holleman, N. Jiddawi, M. Khan, H. Larson, Christi Linardich, P. Matiku, K. Matsuura, C. Maunde, H. Motomura, T. Munroe, R. Nair, C. Obota, B. Polidoro, B. Russell, S. Shaheen, Y. Sithole, W. Smith-Vaniz, F. Uiblein, S. Weerts, A. Williams, S. Yahya, Kent Carpenter

Biological Sciences Faculty Publications

The Western Indian Ocean (WIO) is comprised of productive and highly diverse marine ecosystems that are rich sources of food security, livelihoods, and natural wonder. The ecological services that species provide are vital to the productivity of these ecosystems and healthy biodiversity is essential for the continued support of economies and local users. The stability of these valuable resources, however, is being eroded by growing threats to marine life from overexploitation, habitat degradation and climate change, all of which are causing serious reductions in marine ecosystem services and the ability of these ecosystems to support human communities. Quantifying the impacts …

Resource Characterization And Utilization Of Lepironia Articulata (Retz.) Domin At Kg. Beris Tok Kuand Kg. Beting Lintang, Terengganu, Shoma Tani

Student Works (2020-2029)

This research focused on how handicrafts could contribute to sustainable community development with natural resource management. This research aims to characterize Lepironia articulata as a resource by taxonomy and distribution patterns, examine its utilization through group and semi-structured interviews with ten local residents who got involved in handicraft productions at two selected villages in Setiu Wetlands of Terengganu state and identify their capacity development opportunities by following a guideline provided by United Nations Development Programme. This research clarified that the height of Lepironia articulata in Setiu Wetlands was shorter than the records of the other description and the other site …

Bird Abundance And Diversity In Shade Coffee And Natural Forest Kenya, Frank J. Ong'ondo

Cal Poly Humboldt theses and projects

Coffee, one of the major traded commodities in the world, has captured attention of both the international business class and conservation community due to its value as a beverage and for the habitat it can provide for wildlife. Previous work in Central Kenya has demonstrated that when cultivated with shade trees, coffee farms can host high levels of bird diversity. However, questions of how the bird community in shade coffee farms compares to those in natural forest remained unanswered. Using three visits to each of 160-point count locations in natural forest (80) and shade coffee sites (80) in Central Kenya, …

Population Density, Habitat Characteristics And Preferences Of Red Fox (Vulpes Vulpes) In Chakwal, Pakistan, Amir Naseer, Muhammad Bilal, Umar Naseer, Naureen Mustafa, Bushra Allah Rakha

Journal of Bioresource Management

The Red fox (Vulpes vulpes) is a least concern carnivore according to the IUCN Red List of Threatened Species (2016). However, in Pakistan Red fox is considered as Near Threatened (NT), due to habitat destruction and depletion of food resources. The objective of the study was to identify habitat preferences and population density of Red fox in District Chakwal, Pakistan. Line transect census method was used to estimate the population density of Red fox through direct sighting and indirect method of burrow counting, presence of footprints and scats. A total of 10 transects were carried out at three …

Avifauna Diversity Of Darmalak Ali Kach Game Reserve At District Kohat, Khyber Pakhtunkhwa, Pakistan, Gauhar Zaman, Naveed Ullah Atif, Nazim Ali, Hamid Ullah

Journal of Bioresource Management

Darmalak Ali Kach Game Reserve (District Kohat, Khyber Pakhtunkhwa, Pakistan), has variety of habitats. Field survey was conducted using count method; block method etc. The total number of individuals counted during study was 528. Shannon-Wiener Diversity Index was 3.195 which indicate a high level of biodiversity. The highest number of each bird species observed and data was tabulated and statistical analysis was carried out using Microsoft Excel sheets. Relative Abundance of bird species was also calculated along with species evenness, richness and Shannon-Wiener Diversity Index. During the present survey 27 bird species, belonging to 8 orders and 15 families, were …

New Record Of Two Rodent Species From Khenchela Region (East Of Algeria), Hakim Drouai, Yassine Nouidjem, Fateh Mimeche

Journal of Bioresource Management

Mus spretus is endemic to the Mediterranean region and Jaculus orientalis is only found in North Africa and Saudi Arabia. Their presence in Algeria was previously evidenced in other studies, the present paper focuses on the recent discovery of the Jaculus orientalis Erxleben, 1777 and Mus spretus Lataste, 1883 in a new locality of the East of Algeria, in Khenchela region (Aurès Mountain), based on weight and external measurements. The sampling period took four months between April and July 2019. This observation will enrich the knowledge of Algerian Rodents fauna in general and of Khenchela in particular.

Evaluation Of The Diversity Of Durum Wheat Coleoptera (Triticum Durum Desf.) In The Region Of Sigus Oum El Bouaghi (Eastern Algeria), Amokrane Assia, Khammar Hichem, Hadjab Ramzi, Saheb Menouar

Journal of Bioresource Management

The Oum El Bouaghi region in Eastern Algeria, long considered as a cereal-growing area is nowadays a durum wheat production region par excellence. Although the damage caused by Coleoptera is very significant, studies on the knowledge of their diversity are few and remain limited for some entomological groups. Our work is the first step to evaluate the diversity of Coleoptera and the long-term impact of taking biological management measures against harmful fauna in favour of more environment friendly agriculture. To assess the beetle community, different sampling methods were combined (Barber trap, coloured traps, mowing net and sight hunting). Evaluation of …

A New Cryptic Species Of Scorpiops Peters, 1861 (Scorpiones: Scorpiopidae) From The Northern Western Ghats, India, Shauri Sulakhe, Shubhankar Deshpande, Nikhil Dandekar, Makarand Ketkar, Anand Padhye, Deshabhushan Bastawade

Euscorpius

A new cryptic species of Scorpiops (Scorpiopidae) is described from northern Western Ghats of India with integrated taxonomic approach. Scorpiops telbaila sp. n. is closely related to S. tenuicauda and differs from all species of Scorpiops in morphological features and raw genetic divergence of 5.4-14.1 %.

Diagnosis And Distribution Of Florida Sand Darter, Ammocrypta Bifascia (Teleostei; Percidae), In The Flint River, Georgia, Camm C. Swift, Gregory R. Moyer, Christine E. Fallon, Brett Albanese

Southeastern Fishes Council Proceedings

Abstract: In 2013, we observed the presence of an undocumented Ammocrypta species in the lower Flint River, Georgia. The occurrence represents the first record of the genus in Georgia. Subsequent surveys at 24 sites, using seining or snorkeling, documented additional specimens from mainstem sites (n = 3) between Albany and Bainbridge and from Ichawaynochaway Creek (n = 5 sites), a large tributary to the Flint River. We used morphological and genetic data to identify specimens to species. Morphological examination included 23 morphometric and 8 meristic characters from fifteen specimens that were compared to specimens from Williams (1975). For genetic analyses, …

George Argus’S List Of Salix References, Yulia Kuzovkina-Eischen

Plant Science Articles

This bibliographical list, containing more than 3600 publications related to the genus Salix, was compiled by Dr. Argus during his long scientific career.

Effects Of Wollastonia Biflora Expansion On The Soil Seed Bank In Native Forest Communities On A Tropical Coral Island, Yao Huang, Hai Ren, Jun Wang, Nan Liu, Shuguang Jian, Hongyue Cai, Dafeng Hui, Qinfeng Guo

Biology Faculty Research

Invasive plants and native weeds (i.e., undesirable plant species) often have negative effects on native ecosystems. However, the effects of weed expansion on soil seed banks and seedling emergence in native forests have not been well investigated. In this study, we used a seedling emergence assay to assess the effects of expansion by a native weed, the perennial C4 herb Wollastonia biflora, on the soil seed bank and above-ground vegetation in forests on Yongxing Island, a coral island in the South China Sea. We found that W. biflora expansion was associated with a reduced abundance of native species in the …

Climate Warming’S Alteration Of Host-Parasite Dynamics, Ting-Hsuan Wu

Binghamton University Undergraduate Journal

Parasites and pathogens have significant roles in host population control, and thus host-parasite interactions affect biodiversity. The important question reviewed in this paper is how changes in temperature due to climate change affect host-parasite interactions. There is mounting evidence that elevated temperatures have both beneficial and detrimental effects on parasites and independently on hosts. These independent changes result in altered host-parasite dynamics through various mechanisms. If elevated temperatures enhance parasite survival, risk of disease transmission among hosts is enhanced as well. This enhancement is dependent on temperature-induced shifts in the host lifecycle, as asynchrony in host and parasite development can …

A Hydrodynamics Assessment Of The Hammerhead Shark Cephalofoil, Matthew K. Gaylord, Eric L. Blades, Glenn Parsons

Faculty and Student Publications

© 2020, The Author(s). Hammerhead sharks are characterized by a conspicuous lateral expansion of the head forming a structure known as a cephalofoil. Two theories regarding the function of this structure suggest that it may increase maneuverability as well as produce dynamic lift similar to a cambered airplane wing. Here we report on a family-wide computational fluid dynamics analysis of all eight hammerhead shark species and three sharks with typical head shape. Models cast of the heads of fresh and museum specimens of hammerhead and typical sharks were used to produce pressure surface maps and lift and drag polar diagrams …

Biodiversity And Ecology Of Lichens Of Kenai Fjords National Park, Alaska, Roger Rosentreter

Biology Faculty Publications and Presentations

We inventoried lichens in Kenai Fjords National Park in Alaska, USA We assembled the known information on occurrence and ecology of lichens in this park by combining field, herbarium, and literature studies. Our results provide baseline data on lichen occurrence that may be used in resource condition assessments, vulnerability assessments, long-term ecological monitoring, and resource management. We report a total of 616 taxa of lichenized fungi from the Park, plus an additional five subspecies and three varieties, all of which are new additions to the National Park Service database for this park unit. An additional five species of nonlichenized lichenicolous …

The Prairie Naturalist, Vol. 52, Issue 2, December 2020

The Prairie Naturalist

Comparing Native Bee Communities on Reconstructed and Remnant Prairie in Missouri • Joseph LaRose, Elisabeth B. Webb, and Deborah Finke

Patterns and Potential Causes of Changing Winter Bird Distributions in South Dakota • David L. Swanson, Reza Goljani Amipkhiz, and Mark D. Dixon

Greater prairie-chickens and sharp-tailed grouse have similarly high nest survival in the Nebraska Sandhills • Larkin A. Powell, Walter H. Schacht, Julia P. Ewalt, and Katie R. McCollum

Captive Ring-necked Pheasant Response to Very High Experimental Doses of Lead • Travis J. Runia and Alex J. Solem

Trends in a Greater Prairie Chicken Population Established by Translocation …

An Economic Analysis Of Using Retired Vessels To Create Artificial Reefs In Costa Rica, Josué González

Electronic Theses and Dissertations

ABSTRACT

The Republic of Costa Rica is a Central American country with only 0.03% of the world’s landmass, but 5% of the world’s biodiversity, making it a leading ecotourism destination. Ecotourism is one of the main sources of revenue for the country, but the degradation of coastal reefs has resulted in a significant loss of financial income for developing areas. As a result, many of these areas are searching for methods to revert the degradation of coral reefs.

Artificial reefs play an important ecological role in marine ecosystems due to their complexity and size. They help in the development of …

Spatial Use By Mammals Within Two State Parks In The Ozarks National Scenic Riverways, Benjamin Aaron Smith

Graduate Theses/Dissertations

A mammalian species inventory with comparisons between sampled sites was conducted via multiple methodologies to document presence of mammals at two Missouri state parks within the Ozark National Scenic Riverways. Camera traps, small mammal traps, acoustic detectors, and mist nets were used to detect species at the parks, and species similarity indices and occupancy analyses were used to discern use of space. A mammalian inventory was compiled for each area of inquiry. Greater diversity was found at the park with more variable habitat types. Bat activity was more in the park with a known hibernaculum, though species specific activity differed …

Larval Fish Sampling And Scaphirhynchus Sturgeon Drift Dynamics In The Mississippi And Missouri Rivers, Hae Hyun Kim

Graduate Theses/Dissertations

Humans have been altering the natural ecosystem for centuries. These alterations provide many socioeconomic benefits (e.g., navigation and flood-control). However, these alterations can have negative ecological consequences. Large rivers across the country have been manipulated to facilitate various human activities. Rivers are dynamic systems governed by various abiotic and biotic factors. Ultimately these alterations change the natural biogeochemical cycles and reduce available habitats. These impacts likely affect riverine fishes’ ability to carry out their lifecycle. Riverine organisms, and particularly fish, have adapted to survive in free-flowing systems. Population dynamics (i.e., recruitment, growth and mortality) are the basis of fisheries management. …

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …

Drivers Of Decadal Vegetation Change In Northern Alaska, Jacob Allen Harris

Masters Theses

The Arctic is experiencing rapid climate change. This research documents vegetation change near Atqasuk and Utqiaġvik, Alaska. At each location, 30 plots distributed in a matrix across the landscape, were sampled annually from 2010 to 2019 using a point frame. For every encounter we recorded the height and classified it into eight broad functional groups (deciduous shrubs, evergreen shrubs, forbs, graminoids, bryophytes, lichens, litter and standing dead vegetation); for vascular plants we also identified the species. We found a consistent increase in plant stature and cover over time which was dramatic at Atqasuk. Graminoid cover and height increased at both …

Hunting Contests In New York State, Tyler Caffrey

Honors College Theses

The world is currently in a biodiversity crisis and hunting contests cannot continue. Hunting contests are not legitimate wildlife management tools, but exist for entertainment and killing for a prize. Many of the species targeted can be killed without bag limits. Additionally, many wildlife management practices are retroactive, meaning they are in response to an issue. Within New York State, these contests are not regulated by the NYSDEC beyond adhering to hunting regulations. With these factors together, animals targeted by these contests can be hunted to a detrimental point, and then management agencies would step in. These contests face significant …

Global Conservation Status Of Croaker And Drum (Family: Sciaenidae) And Role Of The Maw Trade, Claire E. Gorman

Biological Sciences Theses & Dissertations

Understanding threats and drivers of extinction risk is critical to conserving marine biodiversity. Although marine bony fishes are some of the most diverse and abundant vertebrates in the world, overexploitation is the major threat to these taxa. Species in the family Sciaenidae are important marine resources in many parts of the world, supporting small- and large-scale fisheries for consumption and the international maw (dried swimbladder) trade. Sciaenids exhibit a diverse array of life history characteristics, such as high fecundity, large body size, formation of spawning aggregations, and longevity. Some characteristics increase their susceptibility to anthropogenic stressors. Despite being ecologically and …

Euscorpius Thracicus Sp. N. (Scorpiones: Euscorpiidae) From Bulgaria, František Kovařík, Graeme Lowe, Markéta Byronová, František Šťáhlavský

Euscorpius

Euscorpius thracicus sp. n. from eastern Bulgaria is described, fully complemented with color photographs of both live and preserved specimens, as well as their habitats. This species is described based on morphology and the cytochrome oxidase I (COI) DNA barcoding marker. In addition to the analyses of external morphology and hemispermatophore, we also describe the karyotype of E. thracicus sp. n. (2n=92).