Biodiversity Commons^™

Review Of Orthochiroides Kovařík, 1998 With Description Of A New Species (Scorpiones: Buthidae), František Kovařík, Graeme Lowe

Euscorpius

The genus Orthochiroides Kovařík, 1998 is reanalyzed. Revised diagnoses and new illustrations for the genus and all four of its species are presented. A new species, O. somalilandus sp. n. from Somaliland is described and illustrated. Phylogenetic relationships of the genus with several other similar genera of small buthids are inferred from a parsimony analysis of 43 discrete morphological characters. The recent synonymy of Orthochiroides with Orthochirus is refuted and the genus is revalidated.

Evaluating Soil Health Changes Following Cover Crop And No-Till Integration Into A Soybean (Glycine Max) Cropping System In The Mississippi Alluvial Valley, Alexandra Gwin Firth

Theses and Dissertations

The transition of natural landscapes to intensive agricultural uses has resulted in severe loss of soil organic carbon (SOC), increased CO₂ emissions, river depletion, and groundwater overdraft. Despite negative documented effects of agricultural land use (i.e., soil erosion, nutrient runoff) on critical natural resources (i.e., water, soil), food production must increase to meet the demands of a rising human population. Given the environmental and agricultural productivity concerns of intensely managed soils, it is critical to implement conservation practices that mitigate the negative effects of crop production and enhance environmental integrity. In the Mississippi Alluvial Valley (MAV) region of Mississippi, USA, …

Diversity-Productivity Relationships In Forests Of The Southeastern United States: Leveraging National Inventory Data And Tree Functional Traits, Elizabeth Baach

Theses and Dissertations

Numerous studies have evaluated the relationship between biodiversity and productivity, with general trends suggesting a positive relationship. While most studies only use species richness, this study also analyzed how productivity changes with functional diversity and Shannon’s diversity index. Functional diversity gives important context to the examination of biodiversity-productivity relationships due to the direct link between organisms’ functional traits and their role in a given ecosystem. This study used data from the USDA Forest Service Forest Inventory and Analysis (FIA) database collected in Alabama, Louisiana, and Mississippi to estimate plot-level productivity and diversity. Structural equation modeling was used to determine the …

Ontogenetic Niche Shift As A Driver Of Community Structure And Diversity In Non-Avian Dinosaurs, Katlin M. Schroeder

Biology ETDs

As some of the most charismatic megafauna to ever walk the earth, the physiology, morphology, growth and evolution of non-avian theropods has been studied exhaustively, yet little is understood about their roles in ecosystems as juveniles. For carnivorous megatheropods, which exceed 1,000kg in mass yet hatched from eggs of limited size, the likelihood of utilizing different prey through ontogeny was high, simply by proxy of the immense difference in size between adults and juveniles. We found these ontogenetic niche shifts, evidenced by significantly different dental microwear in Tyrannosaurids, to have excluded dinosaurian mesocarnivores from Mesozoic communities. The few dinosaurian mesocarnivores …

Detection, Occupancy, Abundance, And Mercury Accumulation Of The Alligator Snapping Turtle (Macrochelys Temminckii) In Texas, David Rosenbaum

Electronic Theses and Dissertations

Land use practices and physical alterations of ecosystems result in habitat loss and fragmentation, while chemical alterations, such as pollutant input, reduce habitat quality and health of exposed organisms. Here, I investigated the effects of watershed- and local-scale environmental variables on the occupancy, abundance, and mercury accumulation of a threatened aquatic species (Macrochelys temminckii, i.e., alligator snapping turtle) within the southwestern periphery of its distribution. Hierarchical modeling suggested the distribution of the species is more affected by watershed-scale land-cover than local habitat, and provided a baseline estimate of average species abundance across its range in eastern Texas. Abundance …

Trophish: Building A Global Database Of Freshwater Trophic Interactions, Jacob M. Ridgway

Honors Thesis

Freshwater management and research frequently use the trophic data of freshwater fishes. Despite this fact, it is difficult to perform a simple search of dietary information for any one fish species. FishBase represents, to our knowledge, the largest compilation of freshwater dietary information to date. However, it excludes a large portion of the ecological literature due to its development taking place prior to the creation of most modern scientific search engines. Our project (TroPhish) is building upon FishBase by digitizing approximately 130 years of data from the fish predation literature. Data from the primary and grey (e.g. theses, dissertations, reports) …

Using Color To Identify Neotropical Parrots In Early Modern European Art: Recognizing Limitations And Avoiding Pitfalls Through Integration Of Scientific And Artistic Knowledge, Deniz Martinez

The Confluence

Colorful Neotropical parrots were amongst the first and most frequent exotic animals to be imported by Europeans from the “New World” of the Americas, becoming key figures in what would become known as the Columbian exchange. There has been an ongoing effort to locate and identify images of Neotropical parrots in the visual record of early modern Europe, with the classification of many remaining unsettled in the scholarship. Proper identification of these images can be valuable data for reconstructing historical biogeography and transatlantic trade; especially compelling is the potential of certain “mystery parrots” in the visual record to support the …

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield

Biological Sciences Undergraduate Honors Theses

Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …

Fish Community Assembly At Multiple Spatial Scales In East Texas Streams, Jake R. Swanson

Electronic Theses and Dissertations

Stream communities are structured by environmental processes that vary in strength across different spatiotemporal scales. Therefore, revealing how stream fish communities are influenced by environmental gradients may clarify how communities respond to disturbance associated with anthropogenic change. I investigated the relative role environmental variables play in the processes that structure the taxonomic and functional diversity of stream fish communities, as well as historical trends in occurrence and local habitat associated with a species of greatest conservation need within east Texas. The results of this study indicate that stream sites with more habitat complexity and stability support a more taxonomically and …

Describing The Effect Of Thin Layer Sediment Placement On Coastal Microbial Communities Using Foraminifera Diversity, Elizabeth B. Billings

Senior Honors Projects

Salt marshes are rich ecosystems that play an important role in aquatic food systems and prevent erosion while also providing essential habitats for wildlife. Climate change has resulted in rising sea levels and erosion of these coastal wetlands. Thin Layer Sediment Placement (TLP) is a restoration effort being implemented to mitigate the effects of climate change on coastal ecosystems. The TLP process raises elevation of the marsh and provides substrates for vegetative growth by spraying dredged sediment over existing marsh. The impacts of TLP on microbial populations is not widely understood, therefore metrics are required to study the effects of …

Nitrogen Availability In Dune Systems And Its Effect On Root Fungal Endophyte Communities., Haley E. Sage

College of Arts & Sciences Senior Theses

As global change persists, changes in resource availability can influence plant-microbe interactions. To understand how resource availability can influence these interactions and species diversity, I focused this research on how varying nitrogen (N) levels affect root endophyte communities in the plant species Ammophila breviligulata, an ecosystem engineer in the dune system. I analyzed the relationship between nitrogen addition and microbial community composition across 60 plots treated with three nitrogen addition levels (control, low, and high) in a long-term experimental field site in the Lake Michigan dunes. I identified Ammophila breviligulata's root endophyte community after creating a culture collection and …

Risk-Prone And Risk-Averse Foraging Strategies Enable Niche Partitioning By Two Diurnal Orb-Weaving Spider Species, Mitchell D. Long

Electronic Theses and Dissertations

Niche partitioning is a major component in understanding community ecology and how ecologically similar species coexist. Temporal and spatial partitioning and differences in foraging strategy, including sensitivity to risk (variance), likely contribute to partitioning as well. Here, we approach this partitioning with fine resolution to investigate differences in overall strategy between two species of diurnal, orb-weaving spiders, Verrucosa arenata and Micrathena gracilis (Araneae: Araneidae), that share similar spatial positioning, temporal foraging window, and prey. Through field observation, we found that V. arenata individuals appear to increase spatial and temporal sampling to compensate for an overall risk-prone strategy that depends on …

Community Structure Analysis Of Mammals Found At The Gray Fossil Site, Tn, Sarah Clark

Electronic Theses and Dissertations

The early Pliocene Gray Fossil Site (GFS) is a biodiverse site with a unique faunal assemblage that represents one of few sites of its age in eastern North America. A community structure analysis of the mammals at GFS was done to characterize species and better understand the paleoenvironment. Data and was gathered from twenty modern communities and five late Neogene sites to compare with GFS. Species from these 26 sites were categorized by body size, locomotor mode, cheek tooth crown height, and diet to characterize niches occupied. Descriptive statistics contrasted proportions of species within categories across communities. Discriminant function analyses …

Operatic Mysticisms: Mountains, Deserts, Waterscapes, Andrew Demczuk

Electronic Theses and Dissertations

Operatic Mysticisms: Mountains, Deserts, Waterscapes examines the ways we encounter environments as readers/viewers of operas, literature, film, and sound recordings, and how each medium requires different detail-gathering techniques. Respective to the previously mentioned mediums, Sun & Sea (2017), Mount Analogue (1952), El Mar La Mar (2017), and Energy Field (2010) are analyzed by engaging with environmental media studies and invention. Reflecting the nature of each landscape—summits of mountains, aporias of deserts, and mysteries of waterscapes—an elemental approach is taken in investigating how these spaces may be noticed, internalized, recorded, and traversed by both the artist and viewer. …

The Effect Of Age On The Mating Call Of The Tungara Frog, Zaizhen Xu

Pacific Undergraduate Research and Creativity Conference (PURCC)

No abstract provided.

Diversity Of Bacteriophage In Burkholderia Species, Abigail Price

Honors Projects

Bacteriophages are viruses that infect and replicate within bacteria and offer the potential of a therapeutic alternative to chronic infections that do not respond to antibiotic-based therapies. B. vietnamiensis is one of a number of Burkholderia species involved with chronic drug resistant infections in the lungs of individuals with compromised respiratory systems, as found in those with chronic obstructive pulmonary disease and, most especially, are of particular significance in patients with cystic fibrosis. The diversity of the Burkholderia species is explored by using online databases and looking at bacteriophage or phage-encoding viruses found in B. vietnamiensis. The open reading frames …

Accumulation Of Persistent Organic Pollutants In Marine Mammals: A Case Study On Cetaceans, Pinnipeds, And Sirenians, Alydia Moorhead

All HCAS Student Capstones, Theses, and Dissertations

Persistent organic pollutants (POPs) are lipophilic semi-volatile organic chemicals that present a range of challenges to marine biota, specifically marine mammals that often occupy a high trophic position in the food web. POPs have become a global problem since they have been shown to cause immunologic, teratogenic, carcinogenic, neurological, and reproductive complications in living organisms due to their resistance to biodegradation and their lipophilic nature. Marine mammals can accumulate these toxic substances through direct ingestion, trophic transfer, adsorption, and maternal offloading. They are susceptible to both bioaccumulation and biomagnification of POPs. Accumulation of POPs is affected by many variables, including …

Genetic Variation In The Ohio Population Of Tonguetied Minnow (Exoglossum Laurae), Emmily Moses, Sarah Armstrong, Madeline Williams

ONU Student Research Colloquium

A singular population of tonguetied minnow (Exoglossum laurae) inhabits a ~50-km segment of the Mad River of western Ohio. Tonguetied minnow is Endangered in Ohio as a consequence of its small geographic range and low abundance. For this study, the polymerase chain reaction (PCR) was used amplify five genetic loci from 35 tonguetied minnow captured from the Mad River. Loci included two mitochondrial genes, the NADH-dehydrogenase 2 (ND2) and the control region (D-loop). From the nuclear genome, myosin heavy chain 6 (myh6) and β-actin (β-act) introns were amplified, as well as a portion of the major histocompatibility (Mhc-IIB) …

Assessing Environmental Factors That Influence Cyanobacterial Blooms In Skinn Lake, Kloe Atwood

Honors Projects

Global lakes are experiencing an increase in toxic algal blooms that can be damaging to the environment. These blooms are caused by cyanobacteria, specifically a species called Planktothrix. Skinn Lake, in Ohio, is a location of a cyanobacterial bloom that is mainly populated by Planktothrix rubescens. This lake was further examined to identify the major toxin-producing bacteria and identify environmental microbes surrounding the bloom. When the data was examined it was found that the microbiomes of the lake greatly differed between the winter (bloom) months and the summer (non-bloom) months. This difference can be viewed within the nutrient analysis from …

Microbial Diversity And Community Structure In Sediments Associated With The Seagrass (Thallassia Testudinum) In Apalachicola Bay, Florida, Rahma Ahmed, Thomas Mcelroy, Troy Mutchler

Symposium of Student Scholars

Seagrass is an angiosperm which provides many ecosystem services in coastal areas, such as providing food, shelter and nurseries for many species, and decreasing the impact of waves on shorelines. A global assessment reported that 29% of known seagrass meadows are in a state of decline due to the effects of human activity. Seagrass is commonly found in shallow marine waters where they form meadows containing a microbiome that plays an important role in providing nutrients for seagrass growth, though little is known about the microorganisms within the seagrass meadow sediments. Our project collected sediments from seagrass meadows and adjacent …

Improving Photosynthetic Efficiency In Microalgae Through The Genetic Engineering Of Energy Sensors And Photoreceptors, Taylor L. Britton

Biology ETDs

Through photosynthesis microalgae can convert sunlight, water, and CO₂ into chemical energy that can be used to generate carbon neutral biofuels and biomass. With an ever-increasing demand and need for petroleum substitutes it is imperative that we improve the output of industrial-relevant crops such as microalgae. One important way of improving output in algae is by understanding the roles that stress and energy conversion is regulated in these organisms. Photosynthetic organisms fundamentally depend on light- and sugar-driven metabolic and signaling networks, which integrate environmental cues to govern and sustain growth and survival. SnRKs (SNF1-related protein kinases) and the photoreceptor …

Leaf Phenology Of Callery Pear: Frost Damage, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan

Five Rivers MetroParks Collaboration Data Archive

This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."

The other two datasets are:

• Leaf Phenology of Callery Pear: Spring
• Leaf Phenology of Callery Pear: Fall

Leaf Phenology Of Callery Pear: Spring, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan

Five Rivers MetroParks Collaboration Data Archive

This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."

The other two datasets are:

• Leaf Phenology of Callery Pear: Fall
• Leaf Phenology of Callery Pear: Frost Damage

Wpa News 117 (2022), World Pheasant Association

Galliformes Specialist Group and Affiliated Societies: Newsletters

WPA News (Spring 2022), number 117

Published by the World Pheasant Association

Conservation And Variation In Agricultural Landscapes: A Survey Of Insect Populations Across Naranjilla Cultivation Methods In The Eastern Andean Cloud Forest, Ian Zakelj

Independent Study Project (ISP) Collection

This study compared insect biodiversity among five sites in agricultural landscapes and natural forest in the El Placer community in the valley of the Rio Pastaza in the eastern Andean cloud forest. The area is of vital importance to conservation, as it falls in the ecological corridor between the Sangay and Llanganates national parks. The primary crop produced by the residents of El Placer is naranjilla, and it is cultivated in a variety of manners, mostly with intensive chemical use. The goal of the study was to find out which types of practices were the least harmful to the insect …

From River To Ridge: The Influence Of Elevation And Habitat On Herpetofauna Species Abundance And Diversity In The Llanganates-Sangay Ecological Corridor, Ecuador, Elle Hankin

Independent Study Project (ISP) Collection

Ecuador is one of the most reptile-diverse countries and is home to the highest abundance of amphibians per unit area, with new species being discovered frequently. The Río Pastaza basin is located to the east of the Andes and is characterized by a steep elevational gradient, converging tropical forest types, and high levels of biodiversity and endemicity. Visual surveying was conducted at night for a total of 48 hours in four different study sites to investigate the influence of elevation and habitat on herpetofauna diversity and abundance. Two comparisons were drawn between the four study sites, grouping SKIS and Waska …

Assessing The Threat Of Coral Decline On Fish Diversity In Response To Temperature, Ryland Talmadge

Independent Study Project (ISP) Collection

Misali, a PECCA-protected island off the east coast of Pemba, Tanzania, is considered to be a marine biodiversity hotspot with a protected Non-Extractive Zone (NEZ) and remaining Extractive Zone (EZ). Upon protection, the island’s fringe reefs faced severe coral bleaching during the 1998 bleaching event, estimated to kill up to 70% of corals. Since the event, several others have occurred in addition to restructuring the management plan in 2006 to expand the region to 1000km. While the damage from the most recent coral bleaching event in 2020 has yet to be surveyed, this study investigates the current reef health in …

Aquatic Diversity In A Changing Tropical Andean Glacierized Catchment: Macroinvertebrates Reveal Possible Important Consequences To The Chimborazo Region As Glaciers Recede And The Climate Continues To Change, Tanner Thomas

Independent Study Project (ISP) Collection

Tropical Andean glaciers are retreating rapidly, and their disappearance will have drastic consequences for the people and ecosystems that depend on them. While they have begun to receive the attention they deserve in scientific literature, much is still not known. Majority of these investigations have taken place on the Volcán Antisana, while other important glacierized systems, like the Volcán Chimborazo have received little attention. This investigation aimed to a) evaluate the possible effects of glacier loss and climate change on aquatic ecosystems by comparing glacial meltwater, non-glacial and mixed streams, and b) to evaluate the effects of pasture intensity on …

Leaf Phenology Of Callery Pear: Fall, Margaret E. Maloney, Abby Hay, Eric B. Borth, Ryan W. Mcewan

Five Rivers MetroParks Collaboration Data Archive

This dataset is one of three affiliated with the paper "Leaf phenology and freeze tolerance of the invasive tree Pyrus calleryana Roseaceae) and potential native competitors."

The other two datasets are:

• Leaf Phenology of Callery Pear: Spring
• Leaf Phenology of Callery Pear: Frost Damage

A Natural Experiment Identifies An Impending Ecological Trap For A Neotropical Amphibian In Response To Extreme Weather Events, Morgan A. Clark, William M. Ota, Sierra J. Smith, Brett K. Muramoto, Summer Ngo, Gabriella E. Chan, Maxwell A. Kenyon, Matthew C. Sturtevant, Max G. Diamond, Gary M. Bucciarelli, Lee B. Kats

All Faculty Open Access Publications

Extreme weather events are predicted to increase as a result of climate change, yet amphibian responses to extreme disturbance events remain understudied, especially in the Neotropics. Recently, an unprecedented windstorm within a protected Costa Rican rainforest opened large light gaps in sites where we have studied behavioral responses of diurnal strawberry poison frogs (Oophaga pumilio) to ultraviolet radiation for nearly two decades. Previous studies demonstrate that O. pumilio selects and defends perches where ultraviolet radiation (UV-B) is relatively low, likely because of the lethal and sublethal effects of UV-B. In this natural experiment, we quantified disturbance to O. pumilio habitat, …