Biodiversity Commons^™

Genetic And Environmental Contributions To Wolbachia-Induced Cytoplasmic Incompatibility, Kelley Van Vaerenberghe

Graduate Student Theses, Dissertations, & Professional Papers

Maternally-transmitted Wolbachia infect the cells of most insect species, but their frequencies in host populations vary. While much of their success can be attributed to their ability to manipulate host reproduction, these manipulations are context-dependent, varying due to several biotic and abiotic factors. Wolbachia’s most common manipulation, cytoplasmic incompatibility (CI), is a conditional sterility phenotype where male-female host compatibility depends on their infection status. Specifically, CI occurs when infected males produce modified sperm that cause increased embryonic lethality unless the female carries a similar infection. Rescuing their eggs from CI increases the relative fitness of infected females, promoting Wolbachia spread …

Use Of Foreign Edna Tracers To Resolve Site- And Time-Specific Edna Distributions In Natural Streams, Braden A. Herman

Cal Poly Humboldt theses and projects

Substantial uncertainty in how to interpret eDNA observations motivates a need for a technique to effectively and efficiently measure of system- and time-specific eDNA distributions. Using a technique to robustly calibrate eDNA dynamics in a given system would improve established eDNA methods such as presence and absence and has the potential to refine estimates of organism abundance using eDNA concentration that are less well understood. Particles of eDNA are present in a wide variety of size and type resulting in varying transport dynamics, persistence, decay, among others. This variation likely makes eDNA transport more complex than that of conservative tracers …

Diversity And Distribution Of Bryozoans Of The Northern To Central Rocky Outer Coast Of California, Ismael Chowdhury

Cal Poly Humboldt theses and projects

The phylum Bryozoa is one of the most diverse groups of marine invertebrates, with a global distribution that spans marine and fresh waters. This study analyzes the Bryozoa in infralittoral communities on rocky surfaces from northern California (Point Saint George) to central California (Estero Bay), spanning 940 kilometers and encompassing 12 rocky intertidal sites. Although recent studies on bryozoan taxonomy and phylogeny have increased due to scanning electron microscopy (SEM) and high throughput sequencing, there is still a lack of studies on species found in shallow waters at intertidal depths, particularly in the northeastern Pacific. This study aims to expand …

Comparing The Microbiomes Of Dental Plaques In 19th Century Ancestral Remains, Ananya Udyaver

UROP Posters

During the construction of VCU’s Hermes A. Kontos Medical Sciences Building in April 1994, nineteenth century ancestral remains were found in an abandoned well on the Medical College of Virginia (MCV) campus. This well, now known as the East Marshall Street Well (EMSW), is thought to have been used as a disposal location for cadaver dissection for surgical and other medical waste in the past. VCU is now seeking to use DNA sequencing technology to match and assemble bones from each individual for a proper burial, uncover the cultural and historical context in which these people lived, and bring a …

Microbial Communities In The Guana Tolomato Matanzas National Estuarine Research Reserve: An Assessment Of The Responses Of Spartina Alterniflora Epiphytes To Nitrogen Enrichment, And A Characterization Of Benthic Cyanobacterial Diversity, Anne C. Hurley

UNF Graduate Theses and Dissertations

Elevated nitrogen and phosphorus inputs from anthropogenic sources, which can lead to significant increases in algal biomass and changes in algal community composition, poses a serious threat to estuarine ecosystems worldwide. While numerous studies have addressed the impacts of nutrient enrichment on epiphytic algae in seagrass habitats, few have investigated potential nutrient-driven changes to epiphytes on emergent salt marsh plants, such as Spartina alterniflora. Epiphytic microalgae on S. alterniflora play an important role in food availability in salt marsh ecosystems, and epiphytic nitrogen-fixing cyanobacteria also provide an important source of nitrogen for salt marsh consumers. The first study included …

Aquatic Invasive Species Survey And Treatment On Lake Umatilla And Lake Celilo 2022-2023 Report, Gabriel E. Campbell, Jacob Rose

Center for Lakes and Reservoirs Publications and Presentations

Flowering Rush (Butomus umbellatus) is an invasive aquatic plant in the Pacific Northwest that threatens salmon habitat. The Center for Lakes and Reservoirs staff surveyed for this and other aquatic species from 2022 and 2023 in the Columbia River in Lake Umatilla and Lake Celilo. This document summarizes their survey efforts including their protocols, data, and small-scale removal efforts.

Hide And Seek: An Exploration Of Antipredator And Predator Avoidance Mechanisms In Orthopodomyia Signifera In Response To Predation From Toxorhynchites Rutilus, Nathaniel Dahlberg

Master's Theses

There have been many observations of larval Orthopodomyia signifera coexisting with the predator Toxorhynchites rutilus. There are three hypotheses that could explain how Or. signifera resists predation from Tx. rutilus. The first hypothesis states that larvae adapt behavioral changes that limit predation. The second hypothesis states thoracic setae serve as a physical defense that prevents Tx. rutilus from grasping Or. signifera. The third hypothesis states Or. signifera possess a chemical defense indicated by aposematic coloration. To test the first hypothesis larval Or. signifera were exposed to conspecific and heterospecific predation cues and their behavior was observed. Both cues …

Developing Best Practices For The Propagation Of Spartina Alterniflora For Use In Salt Marsh Restortaion, Justin Hinson

College of Graduate Studies: Theses & Dissertations

Coastal salt marshes are valuable ecosystems under threat from climate change and sea level rise. Living shorelines offer a promising solution, often incorporating the foundational salt marsh species Spartina alterniflora due to its ability to tolerate natural stressors and maintain sediment stability. However, research suggests that seed-based propagation protocols should be developed on a local scale due to the genetic heterogeneity within and between S. alterniflora populations. Here, we attempt to contribute to the development of one such protocol for coastal Georgia S. alterniflora.

In Fall 2021, seeds were collected bi-monthly from four marshes of varying ocean proximity and …

Natural Variation In Temperature-Modulated Immunity To Pseudomonas Syringae Pv. Tomato (Pst Dc3000) In Arabidopsis Thaliana Plants, Christina A. M. Rossi

Theses and Dissertations (Comprehensive)

Studies conducted on the model plant-pathogen system Arabidopsis thaliana-Pseudomonas syringae pv. tomato (Pst) showed that elevated temperature suppresses the pathogen-induced production of salicylic acid (SA), which is a key plant defence hormone. This increased host vulnerability at higher temperatures is due to downregulated expression of CALMODULIN BINDING PROTEIN 60-LIKE G (CBP60g) and SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1), which encode master regulators of SA production. Collectively, these previous studies only focused on one natural accession of Arabidopsis called Columbia-0 (Col-0). However, the intraspecific variation in Arabidopsis immunity phenotypes under elevated temperature remains unknown. To fill this critical knowledge gap, my …

Ecological Diagnosis And Diversity Structure Of The Forest Birds Community In Machroha Forest (Souk Ahras – Northeastern Algeria), Abdelhak Boucif, Mouslim Bara, Moussa Houhamdi

Journal of Bioresource Management

Machroha forest is a large hot spot of biodiversity of northeastern region of Algeria. It is dominated by several species of oak tree that can contribute to the conservation of many animals such as birds. Our study was carried out from February 2019 to July 2021, in order to diagnosis the ecological status of forest birds and their dynamics. Our results reported that this forest was including 19.21% of the Algerian avifauna diversity. We recorded 78 species of birds classified in 32 families. The main species were sedentary with an insectivorous trophic categories and terrestrial guild. Three species observed in …

Assessing Markhor Habitat Effectiveness In Toshi Shasha Community Game Reserve Chitral Lower Pakistan, Syed Fazal Baqi Kakakhel

Journal of Bioresource Management

Toshi Shasha Community Game Reserve Chitral is located in dry temperate forest of Hindu Kush Mountains. Among the key parameters for assessing habitat effectiveness include plant abundance, density and frequency. Resultantly, plant abundance, densities and frequencies of woody plants were estimated. A total of 50 sampling plots 10 m X 10 m were laid down covering different altitudes. The Toshi Shasha community game reserve Chitral is well known for its diverse flora and fauna that harboring the near threatened markhor (Capar falconeri falconeri). We found occurrence of 11 woody plant species with abundance 165 over an area of …

First Case Of Leucism In The House Bunting Emberiza Sahari In Algeria, Abdelwahab Chedad, Djamel Bendjoudi, Brahim Beladis, Omar Guezoul

Journal of Bioresource Management

Continue to monitor the bioecology of the House bunting in Algeria and mentioned the birds that carry abnormalities and genetic mutation (Albinism and leucism), including passerines species. A male House bunting Emberiza sahari with leucism (partial albinism) was recorded on December 6, 2021, in the city center of the M'Zab Valley at Ghardaïa (Algerian Sahara).

A Comparison Of Seasonal Reproductive Pattern In Two Sympatric Darters Of The Simoperca Clade, Etheostoma Duryi And Etheostoma Simoterum, Tiffany Bell, Elizabeth Cantrell, Bruce Stallsmith

Southeastern Fishes Council Proceedings

We present results from an examination of the seasonal reproductive patterns of two closely related sympatric darter species of the Simoperca clade, Etheostoma duryi and Etheostoma simoterum. Most members of the genus Etheostoma exhibit striking sexual dimorphism, making reproductive strategy a logical point of study. Monthly collections of specimens over a one-year period were performed at a single site on the Flint River near Huntsville, Alabama. Standard length and gross somatic mass were measured for all individuals. Sex ratio was examined for possible skew. Measures of reproductive effort were monthly means of gonadosomatic index of both sexes, total oocyte count, …

An Emerging Infectious Disease Surveillance Platform For The 21st Century, Eloy Ortiz, Alicia Juarrero

MANTER: Journal of Parasite Biodiversity

Current vector surveillance programs are insufficient for coping with the emerging infectious disease crisis. In particular, current practices do not deploy sufficient information technology (IT) tools to generate actionable insights that can inform interventions and contain and mitigate the spread of vector-borne diseases. VectorAnalytica has developed a highly configurable and adaptable IT platform that imports, harmonizes, and integrates a range of data sources. The state-of-the-art backend development allows users to fully appreciate and understand the complexity of infectious disease dynamics without having to resort to additional statistical and GIS software packages. The platform yields actionable insights into outbreak patterns of …

Let Emerging Plant Diseases Be Predictable, Valeria Trivellone

MANTER: Journal of Parasite Biodiversity

A prevalent concept for colonization and evolution among plant pathogens and their hosts stems from a post-Darwinian paradigm rooted in the formalized assumption of “specialized parasitism.” Seminal studies on rust fungi of socioeconomic importance integrated such an evolutionary perspective driven by the assumption of strict coevolution among pathogens and their plant hosts. Following this fundamentally unfalsifiable assumption, theories regarding host-switching for parasites were dismissed. If colonization occurred, this process would depend upon the origin of specific and novel mutations that allow infections of previously unexploited hosts or host groups, the acquisition of a broader host range. After a specific mutation …

Polyphenol Characterization And Antioxidant Capacity Of Multi-Species Swards Grown In Ireland—Environmental Sustainability And Nutraceutical Potential, Samuel Rapisarda, Nissreen Abu-Ghannam

Articles

Ruminant production systems are major contributors to greenhouse gases emissions, with animal feeding practices being the main cause for methane and nitrous oxide’s release. Although feeding animals forages has been proven to be more sustainable, traditional ryegrass monocultures still require a lot of input (e.g., fertilisers and pesticides). Multi-species swards, consisting of different swards, such as grasses, forage legumes and herbs, need less management and fertiliser, produce more dry matter, and also add a variety of phytochemicals into the animal diet. In particular, polyphenols have been associated with a positive impact on animal health and productivity. However, data on the …

Taking Action: Turning Evolutionary Theory Into Preventive Policies, Orsolya Molnár, Marina Knickel, Christine Marizzi

MANTER: Journal of Parasite Biodiversity

The emerging infectious disease (EID) crisis has been challenging global health security for decades, dealing substantial damage to all socioeconomic landscapes. Control measures have failed to prevent or even mitigate damages from an accelerating wave of EIDs, leading to the emergence and devastation caused by the COVID-19 pandemic. In the wake of the pandemic, we must critically review our public health policies and approaches. Current health security measures are based on the evolutionary theorem of host-parasite coevolution, which falsely deems EIDs as rare and unpredictable. The DAMA protocol (Document, Assess, Monitor, Act) is nested in a novel evolutionary framework that …

A Report Of Intraguild Predation By Orthochirus Sp. On Hottentotta Tamulus (Scorpiones: Buthidae) In Maharashtra, India, Mihir Joshi, Shubhankar Deshpande

Euscorpius

We report an event of intraguild predation by Orthochirus sp. feeding on a juvenile individual of Hottentotta tamulus (Fabricius,1798) from Maharashtra, India. This is the first report of intraguild predation among Indian scorpions.

The Genus Barbaracurus In Saudi Arabia (Scorpiones: Buthidae), With Description Of A New Species, František Kovařík, Graeme Lowe, František Šťáhlavský, Pavel Just

Euscorpius

The genus Barbaracurus (Scorpiones: Buthidae) is recorded for the first time from Saudi Arabia. B. yemenensis Kovařík et al., 2018 was found in the extreme southwest of the country, near its border with Yemen. The diagnosis of the species is emended based on the finding of adult males and a large adult female. The proximal margins of the pedipalp fingers of male B. yemenensis are strongly undulate, leaving a gap with the fingers closed. This character differentiates it from all other species of Barbaracurus in the Arabian Peninsula. A second species, B. kabateki sp. n. from Saudi Arabia is described …

Checklist Of Mosses Of Oregon, 2022, John Christy, David H. Wagner, David Kofranek

Institute for Natural Resources Publications

This list is based on Christy et al. (1982) and supersedes any online versions posted prior to the date shown above. Additions to the flora since 1982 are marked by asterisks, with the earliest known verified sources noted in square brackets. Unless noted otherwise, nomenclature conforms to Flora of North America Volumes 27 and 28. Most family placements follow Goffinet et al. 2014. For convenience, synonyms used by Lawton (1971) and more recent works are provided in square brackets. In general, sources for nomenclatural changes can be found in the TROPICOS database. The checklist is followed by annotated lists of …

The Stockholm Paradigm Explains The Dynamics Of Darwin’S Entangled Bank, Including Emerging Infectious Disease, Salvatore J. Agosta

MANTER: Journal of Parasite Biodiversity

Pathogens and their hosts are embedded within the larger biosphere, what Darwin called the “entangled bank.” Emerging infectious disease occurs when a parasite “switches” to a new host. Understanding the dynamics of emerging disease requires understanding the dynamics of host-switching, which requires a more general understanding of how the biosphere and its constituent members cope when conditions change. The Stockholm paradigm is an integrative evolutionary framework that describes how living systems cope with change by oscillating between exploiting and exploring the geographical and functional dimensions of their environments. It combines organismal capacity, ecological opportunity, and the repeated external perturbations to …

Knowing The Biosphere: Documentation, Specimens, Archives, And Names Reveal Environmental Change And Emerging Pathogens, Eric P. Hoberg, Valeria Trivellone, Joseph A. Cook, Jonathan L. Dunnum, Walter A. Boeger, Daniel R. Brooks, Salvatore J. Agosta, Jocelyn P. Colella

MANTER: Journal of Parasite Biodiversity

One Health programs and trajectories are now the apparent standard for exploring the occurrence and distribution of emerging pathogens and disease. By definition, One Health has been characterized as a broadly inclusive, collaborative, and transdisciplinary approach with connectivity across local to global scales, which integrates the medical and veterinary community to recognize health outcomes emerging at the environmental nexus for people, animals, plants, and their shared landscapes. One Health has been an incomplete model, conceptually and operationally, focused on reactive and response-based foundations, to limit the impact of emerging pathogens and emerging infectious diseases and, as such, lacks a powerful …

Establishment Of The Invasive Cactus Moth, Cactoblastis Cactorum (Berg) (Lepidoptera: Pyralidae) In Pakistan: A Potential Threat To Cultivated, Ornamental And Wild Opuntia Spp. (Cactaceae), Muhammad Ather Rafi, Harry Pavulaan, Muhammad Islam, Muhammad Ashfaq, Haseeb Kamran, Walija Fayaz, Gul Naz Parveen, Riffat Sultana, Ahmad Zia, Waqar Ahmed, Qudrat Ullah, Muhammad Qasim, Falak Naz, Nazeer Ahmed, Muhammad Tariq Khan, Muhammad Saeed, Jalal Hayat Khan

The Taxonomic Report of the International Lepidoptera Survey

Subsequent to the significant accomplishment of biological control of Opuntia weeds in Australia, the larvae of the cactus moth, Cactoblastis cactorum (native to parts of South America), were released in many countries for the biological control of native Opuntia species (Simmonds and Bennett, 1966). Inauspiciously, larvae were also released in the Caribbean, where the moth spread naturally and by the human support all over the region (García-Turudi et al., 1971). Its enhanced dissemination rate and the biological potential for invasiveness, suggests that the cactus moth is likely to become an invasive pest of Opuntia in the Southeast United States, Mexico, …

Is There An Economic Advantage To Planting Diverse Summer Annual Forage Mixtures?, Kelly Mercier, Chris Teutsch, Ray Smith, Kenny Burdine, Edwin Ritchey, Eric Vanzant

Journal of Extension

This study examined economic implications of planting summer annual mixtures of grasses, legumes, and forbs at varying nitrogen rates. No differences in yield occurred between the three mixtures, indicating that mixtures with lowest seed cost will be most economical. Applying N resulted in yield increases of 12.26 lb DM per lb N applied. Although yield responses to N were positive, sensitivity analyses showed that applying N resulted in positive net returns only when hay prices were high and N prices were low. When utilization rates are accounted for, enterprise budgets determined grazing to be 18% cheaper to implement than haying.

Selection Strategy Of Small Mammalian Preys By The Common Genet Genetta Genetta Between Natural And Anthropized Environments In Edough Forest Massif (Northeastern Algeria), Fatma Belbel, Mehdi Boukheroufa, Camelia Hesni Benotmane, Rym Sakraoui, Lina Rania Ikram Henada, Feriel Sakraoui

Journal of Bioresource Management

We analyzed fluctuations in of small mammals’ biodiversity through the winter diet of the common genet Genetta genetta (Linnaeus, 1958), to deduce the predator - adopted strategy according to the habitat conditions in which it occurs, particularly in anthropogenic environments. The field sampling was conducted during the 2020 winter season, in two contrasting environments of the Edough mountain range: natural site (Ain Boukal), and anthropized site (Bouzizi landfill). The analysis of 30 collected excrements in each of the two sites, allowed us to identify different food categories including small mammals. The result shows that the common genet is an excellent …

The Evolutionary Dynamics Of Infectious Diseases On An Unstable Planet: Insights From Modeling The Stockholm Paradigm, Angie T. C. Souza, Sabrina B. L. Araujo, Walter A. Boeger

MANTER: Journal of Parasite Biodiversity

Emerging infectious diseases (EIDs) are, besides a question of food safety and public health, an ecological and evolutionary issue. The recognition of this condition combined with the accumulation of evidence that pathogens are not specialists in their original hosts evidences the need for understanding how the dynamics of interaction between pathogens and hosts occurs. The Stockholm Paradigm (SP) provides the theoretical fundaments to understand the dynamics of diseases and design proactive measures to avoid the emergence and reemergence of infectious diseases. In this review, we revisit the models that evaluate several aspects of the proposed dynamics of the SP, including …

Influence Of Environmental Factors On Surface Activity Of Paruroctonus Marksi (Scorpiones: Vaejovidae) In The Mojave Desert, Zia Nisani, Destiny Frederick, Alejandro Garcia-Plascencia, Daian Lopez, Robert Miller, Linhsan Trinh-Nguyen

Euscorpius

Many environmental factors may influence the activity pattern of scorpions in arid ecosystems. We investigated the seasonal variations of Paruroctonus marksi scorpion activity in the Mojave Desert (California, USA). Black light surveys were carried out within two 100 ×100 m plots from August 2017 to September 2018. The majority (85%) of scorpions were found in open areas compared with being in vegetation. The presence of P. marksi was positively correlated with both water vapor pressure and soil temperature, while moon illumination had no significant effect on P. marksi foraging behavior. Scorpions might be using humidity as an indicator of prey …

Indicadores De Sustentabilidad Vba Mesmis, Geovanny Andres Martinez Jimenez

Ciencias Administrativas, Económicas y Contables

El presente libro se ha diseñado con el propósito de que el lector tenga una experiencia satisfactoria al momento de emplear los indicadores VBA MESMIS. Por tanto, el documento se estructura de manera minuciosa en dos apartados; el primero que trata acerca de los criterios de diagnóstico, en el que se plantea un ejemplo con información de tres unidades productivas, con el fin de i) desarrollar los indicadores correspondientes a los criterios; ii) conocer el nivel de desempeño de los indicadores; iii) realizar un análisis general y proponer recomendaciones para el fortalecimiento de la sustentabilidad de las unidades productivas; en …

Distribution And Soil Characteristics Associated With The Neches River Rose-Mallow (Hibiscus Dasycalyx), Morgan E. Langlinais

Electronic Theses and Dissertations

The Neches River rose-mallow, Hibiscus dasycalyx, is a rare herbaceous perennial endemic to East Texas. The threatened, obligate wetland species is currently at risk of being lost in the wild due to habitat loss, encroachment of nonnative and native plant species, and hybridization with two other Hibiscus congeners, Hibiscus laevis and Hibiscus moscheutos. Known locations of each of the three Hibiscus species were used to measure select soil characteristics and habitat variables associated with each of the rose-mallows. H. dasycalyx was concluded to be associated with more fertile soils and slightly more canopy coverage than H. laevis and …

Direccionamiento Estratégico Para La Integración Agroindustrial Frutícola En La Provincia Del Sumapaz En Cundinamarca, Nelson Enrique Fonseca Carreño

Ciencias Administrativas, Económicas y Contables

Un factor común une a los diferentes nichos del mercado y son los productos de la cadena hortofrutícola que necesitan de un enfoque sistémico y propiedades organolépticas para poder competir en el mercado, dentro de los cuales está los grados brix, colorimetría, humedad, tamaño y perecebilidad, los cuales son importantes para cumplir con los requerimientos mínimos de comercialización; lo anterior con el propósito de mitigar los efectos causados dentro de la pos-cosecha como componentes exógenos de temperatura, sequia, presión de plagas y enfermedades y trazas químicas. De ahí la importancia de la dirección de acciones en la cosecha, pos-cosecha, adecuación, …