Life Sciences Commons^™

Contrastive Learning For Unsupervised Auditory Texture Models, Christina Trexler

Computer Science and Computer Engineering Undergraduate Honors Theses

Sounds with a high level of stationarity, also known as sound textures, have perceptually relevant features which can be captured by stimulus-computable models. This makes texture-like sounds, such as those made by rain, wind, and fire, an appealing test case for understanding the underlying mechanisms of auditory recognition. Previous auditory texture models typically measured statistics from auditory filter bank representations, and the statistics they used were somewhat ad-hoc, hand-engineered through a process of trial and error. Here, we investigate whether a better auditory texture representation can be obtained via contrastive learning, taking advantage of the stationarity of auditory textures to …

"Blazing The Trail" For The Future: Bipoc Students' Experiences With Colleges Of Agriculture, Logan Moss

Agricultural Education, Communications and Technology Undergraduate Honors Theses

Since its founding, the United States has faced a constant turmoil surrounding the equitable treatment of people from non-Caucasian backgrounds, especially regarding education. This study sought to examine BIPOC (Black, Indigenous and People of Color) students experiences prior to entry and during their studies in colleges of agriculture within the State of Arkansas. Research has shown that across the country there are discrepancies between the percentage of BIPOC students in the State, university, and colleges of agriculture. This study used a qualitative interview method to determine the factors influencing minority students to enter and stay within a program of study …

Applying Artificial Intelligence In The Hotel Industry: Exploring Perspectives Of Employees, Logan O'Hara

Human Nutrition and Hospitality Management Undergraduate Honors Theses

Robots, Artificial Intelligence, and Service Automation, or RAISA, has become increasingly accessible and affordable for a wider demographic of businesses, including hospitality operations, to implement over the last couple of decades. Especially over the past five years, we’ve seen a significant surge of interest in automating within the service industry and a coupled sense of uneasiness that this technological development would in turn displace the human workers, due to factors such as cost of labor and perceived removal of human error; however, this thesis will posit that automation is most effectively used by augmenting the capabilities of the present workforce. …

Recreational Fishing For Western Rock Lobster: Estimates Of Participation, Effort And Catch From 1986/87 – 2017/18. Fisheries Research Report 299, Fabian I. Trinnie, Cameron J. Desfosses, Brent S. Wise, Karina L. Ryan

Fisheries Research Reports

The Western Rock Lobster (WRL) fishery is one of Australia’s largest single-species recreational and commercial fisheries. The recreational sector has a long history of harvesting this resource, and there is an ongoing need to provide annual estimates of the recreational catch due to the formal resource sharing policy adopted in 2004. Mailrecall surveys, supplemented with occasional phone-recall surveys, provide costeffective monitoring, since WRL is a single-species, licensed recreational fishery operating across large spatial and temporal scales. This report presents estimates of participation, fishing effort and retained catch from annual mail-recall surveys of randomly selected licensed Rock Lobster (RL) recreational fishers …

The Drosophila Melanogaster Neprilysin Nepl15 Is Involved In Lipid And Carbohydrate Storage, Surya Jyoti Banerjee, Christine Woods, Micheal Burnett, Scarlet J. Park, William W. Ja, Jennifer Curtiss

Faculty Publications - Biological Sciences

The prototypical M13 peptidase, human Neprilysin, functions as a transmembrane “ectoenzyme” that cleaves neuropeptides that regulate e.g. glucose metabolism, and has been linked to type 2 diabetes. The M13 family has undergone a remarkable, and conserved, expansion in the Drosophila genus. Here, we describe the function of Drosophila melanogaster Neprilysin-like 15 (Nepl15). Nepl15 is likely to be a secreted protein, rather than a transmembrane protein. Nepl15 has changes in critical catalytic residues that are conserved across the Drosophila genus and likely renders the Nepl15 protein catalytically inactive. Nevertheless, a knockout of the Nepl15 gene reveals a reduction in triglyceride and …

South Dakota Farmers’ Usage Of Conservation Tillage, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted producer surveys in the eastern part of South Dakota in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, and their values. Using publicly available addresses from the Farm Service Agency, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked …

South Dakota Farmers’ Perceived Extreme Weather Frequency And Adaptation Measures, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys of eastern South Dakota (SD) commodity crop producers with the support of the South Dakota Corn Utilization Council. Using publicly available addresses of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked to take a follow up survey. 94 were ineligible, and 350 responded for a 59% response rate. Producers could take the survey online or via …

South Dakota Farmer Survey Chemical Use On Cropland, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys with South Dakota (SD) commodity crop producers in the eastern part of the state in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, challenges, and benefits to using conservation practices, and their attitudes about the environment. Using publicly available addresses from the Farm Service Agency of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the …

South Dakota Farmers’ Usage Of Integrated Crop & Livestock Management, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted producer surveys in the eastern part of South Dakota in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, and their values. Using publicly available addresses from the Farm Service Agency, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked …

Determining The Psychosocial Needs Of The Nurses Of Covid-19 Patients, Allison Stevens

ATU Theses and Dissertations 2021 - Present

Nurses are a vital element of the COVID-19 healthcare crisis and have been since the beginning of the COVID-19 response. The professional strain put on nurses included, but is not limited to: changing professional roles, rapidly changing policies and procedures, an influx of patients—particularly of high acuity, and change in workplace morale. However, nurses also had to carry the burdens of living as a member of society, family member, friend, community member, and above all, simply as a person surviving a pandemic themselves. With all of the stressors nurses have endured, it stands to reason that their psychosocial needs have …

Perceptions Of High Achieving High School Students Regarding The Professionalization Of Teaching And Their Interest In Becoming Teachers, Jonathan Crossley

ATU Theses and Dissertations 2021 - Present

This study was designed to highlight the factors that contribute to high-achieving high school students not deciding to join the teaching profession. There is growing evidence to indicate that the teaching profession is comprised mostly of educators in their first five years in the profession and educators with more than 25 years of teaching experience. Increasing numbers of educators are leaving the profession within their first five years in a classroom. On the other end of the spectrum, as teachers with more than 25 years of experience ultimately retire, the question remains about the viability of the profession for younger …

Predicting Lifespan Of Drosophila Melanogaster: A Novel Application Of Convolutional Neural Networks And Zero-Inflated Autoregressive Conditional Poisson Model, Yi Zhang, V. A. Samaranayake, Gayla R. Olbricht, Matthew S. Thimgan

Mathematics and Statistics Faculty Research & Creative Works

A model to classify the lifespan of Drosophila, the fruit fly, into short- and long-lived categories based on a sleep characteristic, extracted from activity data, is developed using a two-stage process. Stage 1 models the per-minute activity counts of each fly using a zero-inflated autoregressive conditional Poisson model. These probabilities are allowed to vary hourly, reflecting the circadian and other cycles present in a fly's sleep architecture. A 5-day moving window is used to model data allowing the model parameters to vary over the course of the fly's life. The resulting probabilities capture information about changes in sleep patterns with …

Post-Czu Lightning Complex Regeneration In The Año Nuevo Monterey Pine Stand, Allison Trutna

Master of Science in Environmental Sciences and Management Projects

Climate induced increases in fire frequency and severity along with years of fire suppression and drought are predicted for California. The recent CZU Lightning Complex, a high severity wildfire, burned in the Santa Cruz Mountains on California’s central coast and affected an assortment of vegetation, including the survival and recovery of the native Año Nuevo Monterey pine (Pinus radiata (D. Don)) stand. This stand is partially located in Cal Poly’s Swanton Pacific Ranch and has been monitored for over 20 years for the presence of pitch canker (Fusarium circinatum) fungal disease. This study characterized the survival and initial recovery of …

South Dakota Farmers’ Perceived Value Of Carbon Credits, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted surveys with South Dakota commodity crop producers in the eastern part of the state in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, challenges and benefits to using conservation practices, and their attitudes about the environment. Using publicly available addresses from the Farm Service Agency of government program participants, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey …

South Dakota Farmers’ Usage Of Cover Crops, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted producer surveys in the eastern part of South Dakota in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, farming practices including usage of soil and water conservation practices, and their values. Using publicly available addresses from the Farm Service Agency, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked …

Probiotic Intervention Improves Recovery Of Hippocampal Memory And Hippocampal Atrophy Following Disruption From High-Fat Diet In Adult Rats, Sanyourah A. El-Hulu

Honors Scholars Collaborative Projects

Presently, lifestyle factors such as chronic high-fat diet (HFD) consumption occurs concomitantly with weight gain and obesity (Gil-Cardoso et al., 2017; Stranahan et al., 2008). In turn, obesity has been associated with impairments to mental functioning, specifically to memory. Human epidemiological studies show that HFD intake containing saturated, and omega-6-fatty acids is associated with worse performance on a cognitive task whereas a lower fat diet containing omega-3-fatty acids is associated with a protective effect against cognitive decline (Zhang et al., 2006; Uranga et al., 2010). One explanation for this is the critical role of the gut bacteria in brain health. …

South Dakota Farmers’ Usage Of Diversified Crop Rotations, Tong Wang, Jim Ristau

South Dakota Farm Survey

Researchers at South Dakota State University (SDSU) conducted producer surveys in the eastern part of South Dakota in both 2018 and 2021. Producers could take the survey online or via mail and were asked questions about their farm, soil and water conservation practices, and their values. Using publicly available addresses from the Farm Service Agency, a random sample of 3,000 producers were sent the survey in 2018. 650 were ineligible, and 708 responded to the survey for a response rate of 30%. In 2021, the same producers who took the survey in 2018 were asked to take a follow up …

Evaluation Of Essential Oil Products On Performance, Intestinal Permeability, Bone Mineralization, And Oxidative Stress Parameters On Broiler Chickens Under Heat Stress Conditions, Jared Ruff

Poultry Science Undergraduate Honors Theses

The goal of this study was to show how dietary supplementation of three different formulations of essential oils (EO) affected the performance of broiler chickens during heat stress (HS). Day-of-hatch Cobb 500 chicks (n = 500) were randomly divided into four groups: 1. HS control + control diets; 2. HS + control meals supplemented with 37 ppm EO of Lippia origanoides (LO); 3. HS + control diets supplemented with 45 ppm LO + 45 ppm EO of Rosmarinus officinalis (RO) + 300 ppm red beetroot; 4. HS + 45 ppm LO + 45 ppm RO + 300 ppm natural betaine. …

Differentiating The Mechanistic Role And Chemotherapeutic Potential Of Src And Podoplanin In Oncogenic Transformation, Edward P. Retzbach

Graduate School of Biomedical Sciences Theses and Dissertations

There were an estimated 20 million new cancer cases worldwide in 2020, resulting in nearly 1000 deaths per hour [1]. Oral cancer exemplifies the difficulties of treating cancer patients. The first line for oral cancer treatment is surgery and radiation that can lead to patient disfigurement and decreased quality of life in cancer survivors [2-4]. Though there have been many developments in chemotherapy in the last 30 years, the 50% mortality rate associated with oral cancer has not changed [4, 5]. Longitudinal studies that track survival rates in oral cancer patients demonstrate a 3-fold reduction in patient deaths when patients …

The Potential Of Remotely Sensed Vegetation Indices For Monitoring Pasture Condition, Pouria Ramzi, Karen Holmes

Resource management technical reports

The Department of Primary Industries and Regional Development (DPIRD) is developing an integrated monitoring system using remote sensing and on-ground measurements to track pasture condition across Western Australia’s pastoral region. We extended and adapted the methods developed in the Pastoral Lease Assessment Using Geospatial Analysis (PLAGA) project (Robinson et al. 2012), which combined remotely sensed vegetation indices (VIs) with on-ground pasture condition observations to assess the potential of using different vegetation indices in a statewide condition monitoring system.

There were 6 regions in WA’s pastoral rangelands with DPIRD on-ground condition traverse points: Kimberley and Broome, Pilbara, Yalgoo and Sandstone, Goldfields, …

(R1493) Discussion On Stability And Hopf-Bifurcation Of An Infected Prey Under Refuge And Predator, Moulipriya Sarkar, Tapasi Das

Applications and Applied Mathematics: An International Journal (AAM)

The paper deals with the case of non-selective predation in a partially infected prey-predator system, where both the susceptible prey and predator follow the law of logistic growth and some preys avoid predation by hiding. The disease-free preys get infected in due course of time by a certain rate. However, the carrying capacity of the predator population is considered proportional to the sum-total of the susceptible and infected prey. The positivity and boundedness of the solutions of the system are studied and the existence of the equilibrium points and stability of the system are analyzed at these points. The effect …

Fisheries Research Report 319: Resource Assessment Report For Australian Herring In Western Australia, R E. Duffy, A M. Hart, N Caputi, S A. Hesp, A Quinn, A M. Denham, K Smith

Fisheries Research Reports

No abstract provided.

Going Vegan Or Vegetarian: Motivations & Influences, Faunalytics, Jo Anderson, Marina Milyavskaya

Diet

After studying hundreds of U.S. and Canadian consumers during their transition to vegetarianism or veganism (collectively referred to as veg*nism), a new report from research organization Faunalytics found that 42% of people’s veg*n journeys were motivated by health, 20% by animal protection, and 18% by environmental concern. For animal advocates interested in helping new vegans and vegetarians maintain their change of lifestyle, study results suggest a focus on self-driven motivations (like personal values or moral identity) and experiences with animal advocacy.

Fear Of Large Carnivores Is Tied To Ungulate Habitat Use: Evidence From A Bifactorial Experiment, Haley K. Epperly, Michael Clinchy, Liana Y. Zanette, Robert A. Mcceery

Biology Publications

The fear large carnivores inspire in large ungulates has been argued to have cascading effects down food webs. However, a direct link between ungulate habitat use and their fear of large carnivores has not been experimentally tested. To fill this critical gap, we conducted a bi-factorial experiment in an African savanna. We removed shrub cover and broadcast large carnivore vocalizations (leopard, hyena, dog) or non-threatening control vocalizations in both experimentally cleared and shrubby control sites. We recorded the proactive (frequency of visitation) and reactive (fleeing or vigilance) responses of multiple prey (impala, warthog, nyala and bushbuck). Critically, we found a …

A Physician’S Guide To Clinical Documentation Improvement: Aligning Cdi To Health Information Practice (Canadian Health Information Management Association), Noor Baldawi, Jacky Cheung, Georgia Diamanakis, Alvina Jiwani, Zexi Wang

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

The field of clinical documentation improvement (CDI) is emerging alongside the need for more accurate health care information that is reflective of the health status of Canadians. Health information management professionals and physicians play a critical role in the collection, transformation, protection, and distribution of clinical documentation. The quality of health data is dependent on the physician’s specificity in clinical documentation of patient health records, as this information is converted into data by coding specialists. Coded medical information, and associated hospital data, provides information surrounding patient severity of disease, a hospital’s expected length of stay, and a hospital’s mortality rate. …

Supporting Pregnant Persons: The Benefits Of Opening A Birth Centre In London, Ontario (Dynamic Doulas Of London), Alisha George, Megan Harris, Allison Kirkpatrick, Lianna Mathew, Amel Sassi

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

No abstract provided.

Discovering Body Positivity & Self-Image (Gender Equality Coalition Of Ontario), Ella Clarke, Morolayo Ilori, Melanie Peck, Hannah Polley, Mili Shah

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

Body image refers to the way we perceive our bodies, and it can positively or negatively impact physical and mental health (Alleva et al., 2015). Unfortunately, negative body image is becoming more common with some studies finding that 65% of young people are dissatisfied with their bodies (Linardon et al., 2021). This can lead to a variety of psychological and behavioral problems and disorders such as body dysmorphia or eating disorders (Alleva et al., 2015). However, many of these consequences associated with negative body image can be circumvented by learning to foster positive body images through building self-esteem (Jessie’s Legacy, …

A Wicked Problem: The Implementation Of Clinical Guidelines Application To Optimize Patient Care (Uhn Openlab), Ardavan Bonyadi Behrouz, Nelson Chang, Jasmine Luo, Daniel Olteanu, Naomi Smith

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

The purpose of our partnership with the UHN OpenLab was to discover the barriers involved with automating the sporadic release of clinical practice guidelines (CPGs) into the Innovate Guidelines Application (IGA). The problem is considered wicked—interlocking challenges cannot be addressed by a single solution. Accordingly, the goal was to explore the barriers of stakeholders and specialization groups, general guideline issues, and the considerations of healthcare professionals and public perception. An initial literature review was conducted to discover unidentified problems before a first draft of the systems map was created. Subsequently, connections were formed across problems and each was categorized based …

Addressing Workplace Mental Health During Covid-19 (Global Minds Collective), Candace Brooks-Dasilva, Ashlee Jiang, Priya Modi, Komal Patel, Lilian Raphael

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

We aimed to produce novel, comprehensive tools to support The Global MINDS Collective’s mission of co-creating unique workplace infrastructures conducive to employee mental wellness. Our Systems Map uses a multifactorial and intersectional approach to analyze how the COVID-19 pandemic has changed employees’ mental and psychosocial wellness. A systems thinking approach was used to connect ideas from literature and industry resources to expand on concepts such as workplace diversity, burnout, and current practices. The interconnected nature of the systems map allowed us to identify “leverage points,” which were topics with a high degree of connectivity that could be targeted for high-impact …

Restructuring Training (Participation House Support Services), Victoria Lun, Do Yeon Oh, Nadir Saeed, Joe Thorne, Alexander Trusler

Medical Sciences 4300A: Addressing Healthcare Misconceptions Using Scientific Inquiry

Participation House Support Services (PHSS) is a non-profit organization with over 60 locations across Ontario that serves individuals with complex medical, physical, and developmental needs with the goal of including them in the community. The scope of the project covers members of the PHSS organization and the London community that they serve by addressing problems with burnout and culture of resentment that the Coordinators of the organization face. After initial discussions with the community partner, qualitative research was done via focus groups with PHSS Coordinators and training staff. An agreed-upon solution of restructuring the training process was developed, as training …