Life Sciences Commons^™

Linking Migration To Community Resilience In The Receiving Basin Of A Large-Scale Water Transfer Project, Anna Erwin, Zhao Ma, Ruxandra Popovici, Emma Patricia Salas O’Brien, Laura Zanotti, Chelsea A. Silva, Eliseo Zeballos Zeballos, Jonathan Bauchet, Nelly Ramírez Calderón, Glenn Roberto Arce Larreah

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Large-scale water transfer projects (LWTPs) transfer water to urban and agricultural areas. The Majes-Siguas canal, established in 1983, is an LWTP that created a thriving agricultural area through irrigating the Majes district in the Atacama Desert of Peru. Like other LWTP receiving basins, the project has attracted an influx of migrants who work on the farms. At the same time, the Majes LWTP is the district’s only source of water and has an aging infrastructure which presents significant risks. While many studies critically analyze the consequences of LWTPs in water supply basins, few evaluate the resilience of communities living in …

Evaluation Of The Equivalence Of Different Intakes Of Fruitflow In Affecting Platelet Aggregation And Thrombin Generation Capacity In A Randomized, Double-Blinded Pilot Study In Male Subjects, Ranjit K. Das, Tanushree Datta, Dipankar Biswas, Ruedi Duss, Niamh O’Kennedy, Asim K. Duttaroy

Health & Biomedical Sciences Faculty Publications and Presentations

Background: The water-soluble tomato extract, Fruitflow® is a dietary antiplatelet which can be used to lower platelet aggregability in primary preventative settings. We carried out a pilot study to investigate the range of intakes linked to efficacy and to make an initial assessment of variability in response to Fruitflow®.

Methods: Platelet response to adenosine diphosphate (ADP) agonist and thrombin generation capacity were monitored at baseline and 24 h after consuming 0, 30, 75, 150 or 300 mg of Fruitflow® in a randomized, double-blinded crossover study in male subjects 30-65 years of age (N = 12). Results were evaluated for equivalence …

Effects Of Scarification, Phytohormones, Stratification, Soil Types And Warming On The Germination And/Or Performance Of Three Tamaulipan Thornscrub Species, Paula Luera

Theses and Dissertations

The Tamaulipan thornforests of south Texas and northeast Mexico are an ecologically and economically important conservation hotspot. Thornforest restoration is limited by native tree and shrub seedling availability for planting. Seedling shortages arise from low seed availability and knowledge gaps regarding best practices for germinating and growing the 70+ thornforest species desired for restoration plantings. To fill key knowledge gaps, we investigated three ecologically important thornforest species with low or highly variable germination or seedling survival rates: Ebenopsis ebano, Cordia boissieri, and Zanthoxylum fagara. For each, we quantified the effects of different dosages of chemical seed treatments …

Growth Kinetics Of Salmonella Spp. During Post-Harvest Storage Of Fresh And Fresh-Cut Papaya, Amandeep Singh

Theses and Dissertations

Fresh produce safety is major concern in United States. Fresh produce has been associated with numerous food-borne outbreaks each year. Salmonella has been a recurring issue in the papaya industry. Since 2010, imported papayas have been implicated in 8 multistate outbreaks associated with Salmonella spp. causing 480 illnesses, 113 hospitalization and 3 deaths. The main reason behind this problem is as fresh papaya is grown on fields where they are constantly exposed to preharvest microbial contamination through contaminated irrigation water, agricultural soil, raw manure and/or feces deposited by intruding domestic or wild animals. Moreover, majority fresh papaya is also consumed …

Bullet-Proof Boll Weevil: The History Of Boll Weevil Eradication, Evan A. Berg

Theses and Dissertations

Farmers and entomologists have all experimented with various methods to find the best way to defeat the United States' boll weevil. The techniques themselves, while expansive, can be examined within the scope of the years that they were used. This provides an exciting insight into how cotton pest management became more complex as the decades moved on and revealed how the science of cotton pest management evolved to deal with the boll weevil and other future cotton threats.

Evolutionary Development Study Of Firebrat (Thermobia Domestica), Luis Cantu Jr.

Theses and Dissertations

As most evolutionary development studies regarding wing origin take place using insects taxonomically closer to model organism, Drosophila melanogaster, there is a need of expanding studies to lower clades. While D. melanogaster is higher phylogenetically, basal clades would allow for a historical perspective of what occurs within the gene flow of conservative biomarkers. Further understanding of wings and flight would allow for a clearer understanding of how the migration of insects from sea to land has allowed them to become one of the most speciose taxa. Through the study of Thermobia Domestica, part of the Zygentoma, we expand on comprehension …

Characterization Of Biomarkers For Alzheimer’S Disease And Hiv-1 Associated Neurocognitive Disorders, Armando Garces Iii

Theses and Dissertations

Alzheimer’s disease is a neurodegenerative disorder that is characterized by progressive cognitive decline and the accumulation of amyloid beta and neurofibrillary tangles in regions of the brain. These protein deposits are known to generate multiple effects on the brain that lead to neurodegeneration. It has been established that (Human Immunodeficiency Virus) HIV-1 accelerates the aging process of people living with HIV-1. Moreover, there is significant clinical evidence indicating a potential link between the neurodegeneration developed by those with an HIV-1 infection and AD. HIV-1 viral infection causes cognitive impairment known as …

A Gis-Based Model To Assess On-Site Sewage Facility (Ossf) Contamination Risk To Local Water Resources, Alvaro Garcia

Theses and Dissertations

In a collaborative effort between Texas Water Resources Institute (TWRI), Cameron County Public Health (CCPH), Texas A&M AgriLife Extension (TAMAE), and the University of Texas Rio Grande Valley (UTRGV), a GIS database that includes relevant OSSF information, such as location, system age, lot size, and other important parameters was created.

This OSSF database, along with publicly available GIS data, was used to create an integrative GIS-based risk assessment model where OSSF risk parameters were assigned a risk factor and combined into a spatial contamination risk for surrounding areas and their receiving waterbodies. Parameters were broken down into two categories: environmental …

Early Embryology In Collembola With An Emphasis On Wing Development, Samantha A. Gonzalez

Theses and Dissertations

The primary objective of this study was to further the understanding of the wing origin in insects. Currently there are several theories which are popular such as the tergum theory, the pleural plate theory, and the dual theory of wing origin. Studies for these theories have been done on crustaceans, the ancestors to modern day insects. By utilizing a pre insect hexapod, it may be possible to better understand the transition to insect wings. Members of the Collembola species Hypogastrurid are one of these pre-insect hexapods which may provide a clue into origins of wing development. During this study, the …

Prospecting For And Isolation Of Microalgae In South Texas, Mauricio Alejandro Peña

Theses and Dissertations

Microalgae is a very important microorganism that can be used for beneficial purposes for humans. One way to show the importance of algae in this planet is the contribution of Oxygen it provides to the atmosphere, which many organisms rely on (Medeiros et al., 2015). Carbon footprint has been one of the greatest causes for global warming and it is due to the use of fossils to create diesel. One of the ways to avoid contamination is to replace those fuels that are used on daily basis, such as for transportation. The microalgae are able to produce lipids that can …

Duet Phonology And Syntax Of The Red-Crowned Parrots In South Texas, Abigail Pozulp

Theses and Dissertations

Bird behavioral interaction systems show a preference for temporal precision. This preference is exemplified in the way many species avoid masking of vocal signals. Antiphonal duetting in songbirds suggest that overlapping notes are a sign of poor temporal coordination which can signify a weak pairbond, a possible cue for conspecifics seeking to usurp territories or mates. However, parrots (Psittacidae) are accomplished yet understudied duetters in nature. I recorded antiphonal duets produced by a wild population of red-crowned parrots (Amazona viridigenalis) in Brownsville, Texas. Temporal and acoustic variation of signals was assessed within and across a sample of mated …

Characterization Of Soil Nematode Community As Influenced By Weedy Plants And Edaphic Properties, Orlando Garcia

Theses and Dissertations

Nematodes are one of the most critical species globally as they are part of most nutrient recycling. While nematodes play a vital role in nutrient cycling, little is known about them from an ecological standpoint. The majority of current research has focused on a singular component of the community, being those of herbivore/plant-parasitic nematodes. In this study, the community shifts of the nematode trophic groups were analyzed as influenced by native and invasive grasses species in the Lower Rio Grande Valley (LRGV) with the addition of edaphic soil properties.

In our study, the results indicate changes in the composition of …

Home Range Dynamics And Juvenile Dispersal Of Gray Hawks In The Lower Rio Grande Valley, Michael Stewart

Theses and Dissertations

Using GPS-GSM transmitters I determined when 14 juvenile Gray Hawks (Buteo plagiatus) in the Lower Rio Grande Valley of Texas fledged from their natal areas and how far they traveled once they dispersed. These transmitters also allowed me to calculate home range sizes for 22 adults. Additionally, with the GPS-GSM transmitters and 15 VHF transmitters, I discovered that adult Gray Hawks in the study area remained in their territories year-round. Home range sizes were calculated using the minimum convex polygon estimator, the estimation of kernel home-range, and the estimation of kernel Brownian bridge home-range. The same three methods allowed me …

Morphological Characterization And Functional Assessment Of Trichomes In Solanaceae, Sakshi Watts

Theses and Dissertations

Chapter 1: This chapter provides an overview of various trichome types in plants, and also empirically examines their variation on abaxial and adaxial leaf surface of 14 Solanum species. Detailed nomenclature, density, and dimension measurements of each trichome type has been provided using scanning electron-microscopy.

Chapter 2: Scanning electron microscopy was major component of methodology used in my thesis for scanning leaf samples to estimate trichome traits. In this chapter, a more efficient and cost-effective methodology for scanning electron microscopy has been explored.

Chapter 3: This chapter examines the relationship of trichome density and herbivore feeding behavior using abaxial and …

Exploring The Role Of Stigmatic Exudate In The Water Lily (Nymphaceae) Pollination Mechanism Using N. Ampla (Salisb. Dc.), Luis Uribe

Theses and Dissertations

Water lilies are the only known plant group that uses hyperactive nectar glands to divest pollinators of their pollen. The nectar in Nymphaea ampla is thought to contain secondary metabolites that increase pollen deposition possibly by modifying pollinator behavior. This was explored utilizing visitation and fecundity data from the field coupled with survival and behavioral experiments in the laboratory. Replacing nectar with water reduced seed set in N. ampla which was attributed to reduced visitation in water-bearing flowers and not to effects on pollinator detention time. Exposure to nectar did not reduce survivability in Apis mellifera. Pollen and nectar foragers …

Automatic Camera Trap Classification Using Wildlife-Specific Deep Learning In Nilgai Management, Matthew Kutugata, Jeremy Baumgardt, John A. Goolsby, Alexis Racelis

Biology Faculty Publications and Presentations

Camera traps provide a low-cost approach to collect data and monitor wildlife across large scales but hand-labeling images at a rate that outpaces accumulation is difficult. Deep learning, a subdiscipline of machine learning and computer science, has been shown to address the issue of automatically classifying camera trap images with a high degree of accuracy. This technique, however, may be less accessible to ecologists, to small scale conservation projects, and has serious limitations. In this study, a simple deep learning model was trained using a dataset of 120,000 images to identify the presence of nilgai Boselaphus tragocamelus, a regionally specific …

On Inter-Organizational Trust, Control And Risk In Transboundary Fisheries Governance, Gordon M. Hickey, Hunter T. Snyder, Jasper R. Devries, Owen Temby

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Inter-organizational collaboration is often considered essential to transboundary fishery governance, due, in part, to the high levels of task interdependence, the remote and often treacherous conditions, and the limited levels of information available to any policy actor on resource status. In the high seas, Regional Fisheries Management Organizations (RFMOs) are responsible for sustainably managing highly migratory and straddling fish stocks through the implementation of ecosystem-based approaches and ensuring adequate inter-jurisdictional cooperation. A central question facing RFMO governance is therefore how to structure and sustain inter-organizational transboundary collaboration under high uncertainty? This paper presents the case of the North Atlantic Salmon …

Development Of A Novel Strategy To Improve Checkpoint Immune Response In Pancreatic Cancer, Poornima Devi Shaji

Theses and Dissertations

Pancreatic Cancer is the 3rd lethal causing cancers in United States with a survival rate less than 5-7%. In advanced unresectable pancreatic cancer, treatment options are restrained to surgery because of its extreme aggressiveness. Immunotherapy, one of the current advanced treatments has shown promising response in other cancers. However, this therapy is limited in pancreatic cancer due to desmoplasia and fibrotic tumor microenvironment (TME).

Our superparamagnetic iron oxide nanoparticles (SPIONS) of curcumin (Curcuma longa, principal curcuminoid of turmeric) have potential ability to inhibit desmoplasia and tumor stroma with an increased bioavailability. This would soften up the tumors for …

Examining The Role Of Buzzing Time And Acoustics On Pollen Extraction Of Solanum Elaeagnifolium, Mandeep Tayal, Rupesh R. Kariyat

Biology Faculty Publications and Presentations

Buzz pollination is a specialized pollination syndrome that requires vibrational energy to extract concealed pollen grains from poricidal anthers. Although a large body of work has examined the ecology of buzz pollination, whether acoustic properties of buzz pollinators affect pollen extraction is less understood, especially in weeds and invasive species. We examined the pollination biology of Silverleaf nightshade (Solanum elaeagnifolium), a worldwide invasive weed, in its native range in the Lower Rio Grande Valley (LRGV) in south Texas. Over two years, we documented the floral visitors on S. elaeagnifolium, their acoustic parameters (buzzing amplitude, frequency, and duration of buzzing) and …

Methodological Challenges In Studying Trust In Natural Resources Management, Antonia Sohns, Gordon M. Hickey, Jasper R. De Vries, Owen Temby

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Trust has been identified as a central characteristic of successful natural resource management (NRM), particularly in the context of implementing participatory approaches to stakeholder engagement. Trust is, however, a multi-dimensional and multi-level concept that is known to evolve recursively through time, challenging efforts to empirically measure its impact on collaboration in different NRM settings. In this communication we identify some of the challenges associated with conceptualizing and operationalizing trust in NRM field research, and pay particular attention to the inter-relationships between the concepts of trust, perceived risk and control due to their multidimensional and interacting roles in inter-organizational collaboration. The …

Binational Reflections On Pathways To Groundwater Security In The Mexico–United States Borderlands, Rosario Sanchez, José Agustin Breña-Naranjo, Alfonso Rivera, Randall T. Hanson, Antonio Hernández-Espriú, Rick J. Hogeboom, Anita Milman, Jude A. Benavides, Adrian Pedrozo-Acuña, Julio Cesar Soriano-Monzalvo, Sharon B. Megdal, Gabriel Eckstein, Laura Rodriguez

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Shared groundwater resources between Mexico and the United States are facing unprecedented stressors. We reflect on how to improve water security for groundwater systems in the border region. Our reflection begins with the state of groundwater knowledge, and the challenges groundwater resources face from a physical, societal and institutional perspective. We conclude that the extent of ongoing cooperation frameworks, joint and remaining research efforts, from which alternative strategies can emerge, still need to be developed. The way forward offers a variety of cooperation models as the future offers rather complex, shared and multidisciplinary water challenges to the Mexico–US borderlands.

Pre-Sowing Treatments Improve Germinability Of South Texas Native Plant Seeds, Kaitlynn Lavallee, Pushpa Soti, Hansapani Rodrigo, Rupesh R. Kariyat, Alexis Racelis

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

The incorporation of native plant species is central to restoration efforts, but this is often limited by both the availability of seeds and the relatively low viability and germination rates of commercially available seeds. Although pre-sowing treatments are commonly used to improve germination rates of seeds, the efficacy of these treatments is found to vary across species. In this study, we tested how four pre-sow treatments (physical scarification, acid scarification, cold stratification, and aerated hydropriming) affected the viability and seed germination rates of 12 commercially available plant species native to south Texas and commonly used in restoration efforts. Our results …

Lignin, Sugar, And Furan Production Of Industrial Hemp Biomass Via An Integrated Process, Jikai Zhao, Jason Griffin, Kraig Roozeboom, Juhee Lee, Donghai Wang

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Traditional pretreatment of lignocellulosic biomass is often accompanied by washing and disposal of wastewater, which leads to overuse of water and loss of by-products. The objectives of this study were to validate the potential of an acid-base integrated process for simultaneous sugars, furans, and lignin production without washing and wastewater discarding. The difference in conversion performance among different biomass resources was also demonstrated. Parallel acetic acid (HOAc, pH = 2.25) and sodium hydroxide (NaOH, pH = 13.46) pretreatments followed by solid and liquid integration were applied to four genotypes of industrial hemp (Cannabis sativa L.) biomass that were harvested …

A Sugarcane G-Protein-Coupled Receptor, Shgpcr1, Confers Tolerance To Multiple Abiotic Stresses, Manikandan Ramasamy, Mona B. Damaj, Carol Vargas-Bautista, Victoria Mora, Jiaxing Liu, Carmen S. Padilla, Sonia Irigoyen, Tripti Saini, Nirakar Sahoo, Jorge A. Dasilva, Kranthi K. Mandadi

Biology Faculty Publications and Presentations

Sugarcane (Saccharum spp.) is a prominent source of sugar and serves as bioenergy/biomass feedstock globally. Multiple biotic and abiotic stresses, including drought, salinity, and cold, adversely affect sugarcane yield. G-protein-coupled receptors (GPCRs) are components of G-protein-mediated signaling affecting plant growth, development, and stress responses. Here, we identified a GPCR-like protein (ShGPCR1) from sugarcane and energy cane (Saccharum spp. hybrids) and characterized its function in conferring tolerance to multiple abiotic stresses. ShGPCR1 protein sequence contained nine predicted transmembrane (TM) domains connected by four extracellular and four intracellular loops, which could interact with various ligands and heterotrimeric G …

Pi3k Pathway Inhibition With Nvp-Bez235 Hinders Glycolytic Metabolism In Glioblastoma Multiforme Cells, Shreya Udawant, Carl Litif, Alma Lopez, Bonnie Gunn, Erin Schuenzel, Megan Keniry

Biology Faculty Publications and Presentations

Glioblastoma (GBM) is the most lethal primary brain cancer that lacks effective molecular targeted therapies. The PI3K/AKT/mTOR pathway is activated in 90% of all Glioblastoma multiforme (GBM) tumors. To gain insight into the impact of the PI3K pathway on GBM metabolism, we treated U87MG GBM cells with NVP-BEZ235 (PI3K and mTOR a dual inhibitor) and identified differentially expressed genes with RNA-seq analysis. RNA-seq identified 7803 differentially regulated genes in response to NVP-BEZ235. Gene Set Enrichment Analysis (GSEA) identified two glycolysis-related gene sets that were significantly enriched (p < 0.05) in control samples compared to NVP-BEZ235-treated samples. We validated the inhibition of glycolytic genes by NVP-BEZ235 and examined the impact of the FOXO1 inhibitor (AS1842856) on these genes in a set of GBM cell lines. FOXO1 inhibition alone was associated with reduced LDHA expression, but not ENO1 or PKM2. Bioinformatics analyses revealed that PI3K-impacted glycolytic genes were over-expressed and co-expressed in GBM clinical samples. The elevated expression of PI3K-impacted glycolytic genes was associated with poor prognosis in GBM based on Kaplan–Meier survival analyses. Our results suggest novel insights into hallmark metabolic reprogramming associated with the PI3K-mTOR dual inhibition.

First Ecological Characterization Of Whip Black Coral Assemblages (Hexacorallia: Antipatharia) In The Easter Island Ecoregion, Southeastern Pacific, Jan M. Tapia-Guerra, Cynthia M. Asorey, Erin E. Easton, Daniel Wagner, Matthias Gorny, Javier Sellanes

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

One of the main priorities of marine scientific research is to provide practical information and guidance for biodiversity conservation and management. In this context, the identification of key and fragile habitat-forming species is particularly important. Despite their ecological importance, whip corals in the order Antipatharia remain poorly studied around the world, and especially in the South Pacific. During recent expeditions to explore mesophotic and deep benthic habitats around Rapa Nui (Easter Island), dense assemblages of whip black corals were observed in situ. We here report the first detailed description of the distribution and abundance of these black coral assemblages …

Morphological Characterization Of Trichomes Shows Enormous Variation In Shape, Density And Dimensions Across The Leaves Of 14 Solanum Species, Sakshi Watts, Rupesh R. Kariyat

Biology Faculty Publications and Presentations

Trichomes are the epidermal appendages commonly observed on plant surfaces including leaves, stem and fruits. Plant trichomes have been well studied as a structural plant defence designed to protect plants against abiotic and biotic stressors such as UV rays, temperature extremities and herbivores. Trichomes are primarily classified into glandular and non-glandular trichomes, based on the presence or absence of a glandular head. The plant genus Solanum is the largest genus of family Solanaceae that houses ~3500 species of ecological and economic importance have a diverse set of trichomes that vary in density and morphology. However, due to the incomplete and …

Next-Generation Ensemble Projections Reveal Higher Climate Risks For Marine Ecosystems, Derek P. Tittensor, Camilla Novaglio, Cheryl S. Harrison, Ryan F. Heneghan, Nicolas Barrier, Daniele Bianchi, Laurent Bopp, Andrea Bryndum-Buchholz, Gregory L. Britten, Matthias Büchner

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Projections of climate change impacts on marine ecosystems have revealed long-term declines in global marine animal biomass and unevenly distributed impacts on fisheries. Here we apply an enhanced suite of global marine ecosystem models from the Fisheries and Marine Ecosystem Model Intercomparison Project (Fish-MIP), forced by new-generation Earth system model outputs from Phase 6 of the Coupled Model Intercomparison Project (CMIP6), to provide insights into how projected climate change will affect future ocean ecosystems. Compared with the previous generation CMIP5-forced Fish-MIP ensemble, the new ensemble ecosystem simulations show a greater decline in mean global ocean animal biomass under both strong-mitigation …

Disentangling Diverse Responses To Climate Change Among Global Marine Ecosystem Models, Ryan F. Heneghan, Eric Galbraith, Julia L. Blanchard, Cheryl S. Harrison, Nicolas Barrier, Catherine Bulman, William Cheung, Marta Coli, Tyler D. Eddy, Maite Erauskin-Extramiana

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Climate change is warming the ocean and impacting lower trophic level (LTL) organisms. Marine ecosystem models can provide estimates of how these changes will propagate to larger animals and impact societal services such as fisheries, but at present these estimates vary widely. A better understanding of what drives this inter-model variation will improve our ability to project fisheries and other ecosystem services into the future, while also helping to identify uncertainties in process understanding. Here, we explore the mechanisms that underlie the diversity of responses to changes in temperature and LTLs in eight global marine ecosystem models from the Fisheries …

Moving Conferences Online: Lessons Learned From An International Virtual Meeting, Paris V. Stefanoudis, Leann M. Biancani, Sergio Cambronero-Solano, Malcolm R. Clark, Jonathan T. Copley, Erin E. Easton, Franziska Elmer, Steven H. D. Haddock, Santiago Herrera, Ilysa S. Iglesias

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

We consider the opportunities and challenges associated with organizing a conference online, using a case study of a medium-sized (approx. 400 participants) international conference held virtually in August 2020. In addition, we present quantifiable evidence of the participants’ experience using the results from an online post-conference questionnaire. Although the virtual meeting was not able to replicate the in-person experience in some aspects (e.g. less engagement between participants) the overwhelming majority of respondents found the meeting an enjoyable experience and would join similar events again. Notably, there was a strong desire for future inperson meetings to have at least some online …