Life Sciences Commons^™

Movement I From Lamentationes, Timothy W. Mcdunn

CrissCross

This piece is a setting of the first poem in the book of ʼêḵāh from the Hebrew Bible (the book of Lamentations in the Christian Old Testament). Setting the text in its original language has had two primary advantages: (1) it preserved euphony and other poetic subtleties and (2) it left the poetry's original cultural context intact.

I use harmonic rhetoric to imitate several features of the text. One of them is the so-called "tragic reversal," a device illustrated by the lines cited above, where a reversal of fortune is expressed through the contrast between the first colon and the …

Type 1 Diabetes Alters Lipid Handling And Metabolism In Human Fibroblasts And Peripheral Blood Mononuclear Cells, Albert R. Jones Iv, Emily L. Coleman, Nicholas R. Husni, Jude T. Deeney, Forum Raval, Devin Steenkamp, Hans Dooms, Barbara S. Nikolajczyk, Barbara E. Corkey

Clinical and Translational Science Faculty Publications

Triggers of the autoimmune response that leads to type 1 diabetes (T1D) remain poorly understood. A possibility is that parallel changes in both T cells and target cells provoke autoimmune attack. We previously documented greater Ca²⁺ transients in fibroblasts from T1D subjects than non-T1D after exposure to fatty acids (FA) and tumor necrosis factor α (TNFα). These data indicate that metabolic and signal transduction defects present in T1D can be elicited ex vivo in isolated cells. Changes that precede T1D, including inflammation, may activate atypical responses in people that are genetically predisposed to T1D. To identify such cellular differences …

Testing For The Presence Of Botryosphaeria Dothidea In Ceanothus Spinosus, Brandon R. Grinovich, Chelsea N. Puncochar, Katarina L. Carter, Stephen D. Davis, Rodney L. Honeycutt, Talia A. Cao, Karagan L. Smith

Featured Research

Botryosphaeria dothidea is an opportunistic fungus found in some of the cavitated branches of the vegetation in the Santa Monica Mountains. In this study, we focused on finding the presence of Botryosphaeria dothidea in Ceanothus spinosus located on Pepperdine University’s campus. We wanted to test this hypothesis because we observed a large amount of dieback in the Ceanothus spinosus population and wanted to identify a possible contributor. Because of the large number of cavitated branches the Ceanothus spinosus contained, we hypothesized they contained fungus. To test this, we took twenty samples of twenty different Ceanothus spinosus, isolated the fungus …

Cytochrome B5 Protects Photoreceptors From Light Stress-Induced Lipid Peroxidation And Retinal Degeneration, Xinping Chen, Hana Hall, Jeffrey P. Simpson, Walter D. Leon-Salas, Donald F. Ready, Vikki M. Weake

Department of Biochemistry Faculty Publications

Lipid peroxides are generated by oxidative stress in cells, and contribute to ageing and neurodegenerative disease. The eye is at special risk for lipid peroxidation because photoreceptors possess amplified sensory membranes rich in peroxidation-susceptible polyunsaturated fatty acids. Light-induced lipid peroxidation in the retina contributes to retinal degeneration, and lipid peroxidation has been implicated in the progression of age-associated ocular diseases such as age-related macular degeneration (AMD). Here, we show that exposing Drosophila melanogaster to strong blue light induces oxidative stress including lipid peroxidation that results in retinal degeneration. Surprisingly, very young flies are resilient to this acute light stress, suggesting …

Zinc Chloride Activates Phospho-Akt And Promotes Chondrocyte Maturation In The Atdc5 Chondrogenic Cell Line, Donya T. Burgess

Seton Hall University Dissertations and Theses (ETDs)

Fracture healing is characterized by inflammation, cartilage formation, bone deposition, and remodeling. Endochondral ossification is an important part of callus formation that relies on the maturation of chondrocytes. Early in their maturation these cells express collagen type II alpha 1 chain (COL2A1) and express collagen type X alpha 1 chain (COL10A1) as they mature further and become hypertrophic chondrocytes. Activation of the insulin pathway is considered a primary factor involved in the initiation of chondrogenesis and its progression during bone healing. Insulin mimetics like zinc chloride (ZnCl₂) have been shown to improve bone healing outcomes and enhance bone …

Demand And Risk Management Analysis Of Rainfall Index Insurance, Ashlee Carlson

Department of Agricultural Economics: Dissertations, Theses, and Student Research

This thesis has two research chapters regarding the government provided Rainfall Index Insurance for Pasture, Rangeland, and Forage (RI-PRF). In the first chapter, we empirically examined whether charity hazard exists between Rainfall Index Insurance (RI-PRF) and government mandated Livestock Forage Program by estimating the demand for RI-PRF. Evidence was found that lagged LFP payments significantly increase the marginal effects of participating in RI-PRF in three of the five states and in the combined model. These results support the opposite of charity hazard where LFP payments improve the probability of purchasing RI-PRF. In our other models, the results provide evidence in …

Hyperhomocysteinemia-Induced Gene Expression Changes In The Cell Types Of The Brain, Erica M. Weekman, Abigail E. Woolums, Tiffany L. Sudduth, Donna M. Wilcock

Sanders-Brown Center on Aging Faculty Publications

High plasma levels of homocysteine, termed hyperhomocysteinemia, are a risk factor for vascular cognitive impairment and dementia, which is the second leading cause of dementia. While hyperhomocysteinemia induces microhemorrhages and cognitive decline in mice, the specific effect of hyperhomocysteinemia on each cell type remains unknown. We took separate cultures of astrocytes, microglia, endothelial cells, and neuronal cells and treated each with moderate levels of homocysteine for 24, 48, 72, and 96 hr. We then determined the gene expression changes for cell-specific markers and neuroinflammatory markers including the matrix metalloproteinase 9 system. Astrocytes had decreased levels of several astrocytic end feet …

One-Step Hot Formamide Extraction Of Rna From Saccharomyces Cerevisiae, Daniel Shedlovskiy, Natalia Shcherbik, Dimitri G Pestov

Rowan-Virtua School of Osteopathic Medicine Departmental Research

Current methods for isolating RNA from budding yeast require lengthy and laborious steps such as freezing and heating with phenol, homogenization with glass beads, or enzymatic digestion of the cell wall. Here, extraction with a solution of formamide and EDTA was adapted to isolate RNA from whole yeast cells through a rapid and easily scalable procedure that does not require mechanical cell lysis, phenol, or enzymes. RNA extracted with formamide-EDTA can be directly loaded on gels for electrophoretic analysis without alcohol precipitation. A simplified protocol for downstream DNase treatment and reverse transcription reaction is also included. The formamide-EDTA extraction of …

Effect Of Sonication On The Viscosity Of Reconstituted Skim Milk Powder And Milk Protein Concentrate As Influenced By Solids Concentration, Temperature And Sonication, Vidita K. Desphande, M. K. Walsh

Nutrition, Dietetics, and Food Sciences Faculty Publications

Skim milk powder (SMP) and milk protein concentrates (MPCs) are manufactured by evaporation followed by spray drying and are widely used as functional and nutritional ingredients. This study investigated the effects of temperature (40–60 °C) and total solids content (TS) on the viscosity of reconstituted MPC (rMPC) (≥30% TS) and SMP (rSMP) (≥46% TS) in laboratory conditions. Additionally, the influence of sonication in batch (70% amplitude) and flow through systems (90% amplitude) was studied in a laboratory setting. The viscosity increased for all treatments with an increase in TS and decreased with an increase in temperature. Overall, sonication in both …

Uncertain Influences: Genetics, Pathology, And Alzheimer’S Disease, Sumita M. Strander

Dartmouth Undergraduate Journal of Science

Alzheimer’s disease (AD) is a progressive neurodegenerative disease that primarily affects individuals above the age of 65 and is often associated with memory loss, one of its chief symptoms. Although it was first discovered by Alois Alzheimer in 1906, AD has only recently garnered attention proportionate to the impact it is expected to have as the world’s population ages at increasing rates. Despite the certainty of this its importance, there is much the medical and scientific communities do not know about the etiology of this disease. This paper will discuss a few of the reasons for this lack of knowledge …

The World Of Placebos, Zachary Z. Wang

Dartmouth Undergraduate Journal of Science

The Placebo Effect is a fascinating but poorly understood mystery of medicine and human biology. Its workings continue to surprise scientists and patients everywhere. This is a brief introduction to the placebo effect from its early roots to current issues and new discoveries in the field.

Telesurgery: Surgery In The Digital Age, Dylan J. Cahill

Dartmouth Undergraduate Journal of Science

The dawn of the digital age has transformed the way we now receive and provide healthcare. Today, providers have instant access to all of their patients’ information, just as patients can connect with their providers on their smartphones in minutes from nearly anywhere in the world.

Lyme Disease: An Influential Outdoor Hazard, Kevin Kang

Dartmouth Undergraduate Journal of Science

Lyme disease is an important, common illness in New England. A relatively new illness, it was discovered about forty years ago in the town of Lyme, Connecticut. Now, it has become the most common vector-transmitted illness in the United States, with over 30,000 cases annually. Lyme disease arises when a bacterium is transmitted to a human via deer tick bite, so those of us involved in outdoor sports are most likely to contract the disease. Inhabitants of New England and the northeastern U.S. are most vulnerable to the disease, as 95% of Lyme Disease cases occur in only 14 out …

Towards Simulating The Human Brain, Logan T. Collins

Dartmouth Undergraduate Journal of Science

The human brain has been described as “the most complex object in the universe.” Its meshwork of 86 billion neurons,84 billion glial cells, and over 150 trillion synapses may seem intractable. Nonetheless, efforts to comprehensively map, understand, and even computationally reproduce this structure are underway. Large collectives of researchers have come together, working in concert towards these goals. The Human Brain Project (HBP) and its precursor, the Blue Brain Project, have spearheaded the brain simulation goal.Some other notable organizations include the China Brain Project, the BRAIN Initiative. On a scale which parallels the space program and the Human Genome Project, …

Effects Of Adenovirus Infection On The Localization Of Cellular Protein Pat1b, Emilee Friedman, Kasey A. Karen

Georgia Journal of Science

Adenoviruses are a diverse family of nonenveloped, double-stranded DNA viruses with a variety of vertebrate hosts including humans. Over 50 serotypes of human adenovirus have been identified, and cause a number of illnesses, including conjunctivitis, gastroenteritis, and respiratory infections. The life cycle of adenovirus is divided into immediate early, early, and late phases, with immediate early proteins controlling transcription and the cell cycle, early proteins being largely regulatory, and late proteins being structural. Early proteins such as E4 11k have been demonstrated to relocalize key cellular proteins, including proteins found within mRNA processing bodies (p-bodies). It is hypothesized that E4 …

The Toxicity Of Nanoparticles Depends On Multiple Molecular And Physicochemical Mechanisms, Yue-Wern Huang, Melissa Cambre, Han-Jung Lee

Biological Sciences Faculty Research & Creative Works

Nanotechnology is an emerging discipline that studies matters at the nanoscale level. Eventually, the goal is to manipulate matters at the atomic level to serve mankind. One growing area in nanotechnology is biomedical applications, which involve disease management and the discovery of basic biological principles. In this review, we discuss characteristics of nanomaterials, with an emphasis on transition metal oxide nanoparticles that influence cytotoxicity. Identification of those properties may lead to the design of more efficient and safer nanosized products for various industrial purposes and provide guidance for assessment of human and environmental health risk. We then investigate biochemical and …

Timber Talk, Vol. 55, No. 4, December 2017

Timber Talk: Nebraska Forest Industry Newsletter

Lumber Market Reports: Northern, Southern, Appalachian

Hardwood Lumber Prices: Green, Kiln-Dried, Pallet Lumber, Ties (7x9)

Tribal Walnut Timber Harvesting Expanding in Nebraska, by Anthony Crill, Bureau of Indian Affairs

To Influence Buyers, Tell Stories, by Paul Reilly, Reilly Sales Training

Green Star Energy Group, South Sioux City Celebrates Bioenergy Day

Welcome Kristina Hughes

Nebraska Forest Industry Spotlight: Native Lumber & Sawmill, Litchfield

Wood Businesses Work to Increase Marketing Skills

Trading Post

Progression Magazine, 2017 Winter, Coastal Carolina University

Progression Magazine

Magazine of the College of Science at Coastal Carolina University.

Dopamine Levels In The Brain Of Rat Models Of Human Rheumatoid Arthritis, Amelia Stinson

Theses & Dissertations

Research Focus. Rheumatoid arthritis (RA) is a chronic, debilitating, autoimmune disease that causes the destruction of bone tissue and the articular structures of joints. At least 30% of RA patient populations have cognitive impairment. Acidic dopamine (DA) is the principal neuroimmunotransmitter that links the central nervous system and peripheral nervous system together. The aim of the present study was to determine the levels of DA and its two acidic metabolites: 3,4-dihydroxyphenylacetic acid (DOPAC) and homovanillic acid (HVA) in arthritic induced rats, and whether their levels vary across four different parts of the brain: amygdala (AMG), front cerebral cortex (CX), hippocampus …

An Investigation Of The Levels Of Pro-Inflammation Cytokines In The Brain Of Autoimmune Lewis Rats, Han Yang

Theses & Dissertations

Rheumatoid arthritis (RA) is a chronic inflammatory joint disease, which can cause cartilage and bone damage, as well as disability. A reported symptom of RA includes tissue inflammation disease and cognitive dysfunction. This study aimed to compare the concentration of selected cytokines in the cerebral cortex, hippocampus, hypothalamus, amygdala, and cerebellum of Lewis rats. Age and sex-matched Lewis rats were separated into two groups: control and adjuvant-induced RA. Twenty-eight days after the adjuvant injection, groups were sacrificed and brains dissected using the stereotaxic atlas of Paximos and Watson as a guide. Pro-inflammatory cytokines IL-1β, IL-6, and IL-23, plus the anti-inflammatory …

A Motivational Climate Intervention And Exercise-Related Outcomes: A Longitudinal Perspective, Theresa C. Brown, Mary D. Fry, E. Whitney Moore

Kinesiology, Health and Sport Studies

While researchers have suggested that the social context in exercise settings is linked to individuals’ physical activity motivation and potential exercise-related outcomes, few research designs have examined the nuance of those relationships. Moreover, interventions targeting the social context of exercise settings are sparse, so the potential impact of staff training on members’ motivation to exercise are not well known. Drawing from two major motivation theories, achievement goal perspective theory and self-determination theory, this study considered an intervention with fitness center staff from the members’ perspectives. Members completed a survey before and after an intervention designed to help staff create a …

Telomerase Activity Is Required For The Telomere G-Overhang Structure In Trypanosoma Brucei, Ranjodh Sandhu, Bibo Li

Biological, Geological, and Environmental Faculty Publications

Trypanosoma brucei causes fatal human African trypanosomiasis and evades the host immune response by regularly switching its major surface antigen, VSG, which is expressed exclusively from subtelomeric loci. Telomere length and telomere proteins play important roles in regulating VSG silencing and switching. T. brucei telomerase plays a key role in maintaining telomere length, and T. brucei telomeres terminate in a single-stranded 3′ G-rich overhang. Understanding the detailed structure of the telomere G-overhang and its maintenance will contribute greatly to better understanding telomere maintenance mechanisms. Using an optimized adaptor ligation assay, we found that most T. brucei telomere G-overhangs end in …

Economic Contribution Of The Agricultural Sector To The Arkansas Economy In 2015, Leah English, Jennie Popp, Wayne Miller

AAES Research Reports and Research Bulletins

Agriculture and associated agricultural activities are major contributors to the Arkansas economy. Agriculture is defined as the sum of agricultural production and processing activities, unless otherwise specified, and includes crop and animal production and processing, agricultural support industries, forestry and forest products, and textile goods. Agriculture contributes to the economy through direct agricultural production and value-added processing, and also leads to economic activity in other parts of the economy. This report is the tenth in a series of reports examining agriculture’s economic contribution to the Arkansas economy. The total economic contribution of agriculture (direct, indirect, and induced effects) on value …

Translating Genetic And Preclinical Findings Into Autism Therapies, Maria Chahrour, Robin Kleiman, M Chiara Manzini

Pharmacology and Physiology Faculty Publications

Autism spectrum disorder (ASD) is a complex neurodevelopmental disorder characterized by social deficits and repetitive/restrictive interests. ASD is associated with multiple comorbidities, including intellectual disability, anxiety, and epilepsy. Evidence that ASD is highly heritable has spurred major efforts to unravel its genetics, revealing possible contributions from hundreds of genes through rare and common variation and through copy-number changes. In this perspective, we provide an overview of the current state of ASD genetics and of how genetic research has spurred the development of in vivo and in vitro models using animals and patient cells to evaluate the impact of genetic mutations …

Greening The Gateway Cities: Summer Internship With The Clark University Human Environment Regional Observatory (Hero) And Massachusetts Department Of Conservation And Recreation (Dcr), Zhiwen Zhu

Sustainability and Social Justice

This report provides a detailed account of my internship experience with the Clark University Human-Environment Regional Observatory (HERO) and Massachusetts Department of Conservation and Recreation (DCR) in the summer of 2017. This internship concerns the urban tree health assessment in three ‘Greening the Gateway’ cities in Massachusetts. During the internship, I conducted tree survey field work, database management, mapping, tree survey data analysis and urban tree plantation benefits microclimate simulation. During the internship I worked with the professors and students at Clark University and University of Massachusetts, Amherst, and the staff from Department of Conservation and Recreation (DCR), Worcester Tree …

Calibration Of The Apex Model To Simulate Management Practice Effects On Runoff, Sediment, And Phosphorus Loss, Ammar B. Bhandari Ph.D., Nathan O. Nelson, Daniel W. Sweeney, Claire Baffaut, John A. Lory, Anomaa Senaviratne, Gary M. Pierzynski, Phillip L. Barnes

Agriculture Faculty Publications

Process-based computer models have been proposed as a tool to generate data for Phosphorus (P) Index assessment and development. Although models are commonly used to simulate P loss from agriculture using managements that are different from the calibration data, this use of models has not been fully tested. The objective of this study is to determine if the Agricultural Policy Environmental eXtender (APEX) model can accurately simulate runoff, sediment, total P, and dissolved P loss from 0.4 to 1.5 ha of agricultural fields with managements that are different from the calibration data. The APEX model was calibrated with field-scale data …

Effects Of Trophic Relationships On Oyster Reef Restoration Success In The Mississippi Sound, Virginia Robin Fleer

Dissertations

Natural and anthropogenic changes resulting from altered hydrology, hurricanes, variable precipitation, and the BP oil spill have all taken their toll on oyster reefs in Mississippi. In response, oyster reef restoration efforts are currently underway within the Northern Gulf of Mexico. In order to understand why these efforts succeed or fail, it is crucial to consider predator-prey relationships within the context of the trophic dynamics of oyster reefs. Thus, for this dissertation study I integrated a multidisciplinary approach to understanding key trophic interactions affecting oyster recruitment, growth and survival, comprising field sampling, manipulative lab experiments, and individual-based modeling. Spat settlement …

Historical Change Of Seagrasses In The Mississippi And Chandeleur Sounds, Linh Thuy Pham

Dissertations

Seagrasses are important coastal resources facing numerous stressors, and losses have been documented from local to global assessments. Under the broad theme of habitat loss and fragmentation, a study of historical change in total area and landscape configuration of seagrasses in the Mississippi and Chandeleur Sounds was conducted. Mapping data was collated from a multitude of previous projects from 1940 to 2011.

Comparisons of seagrass area among various studies that used different mapping methods can result in overestimation of area change and misleading conclusions of change over time. The vegetated seagrass area (VSA) data were generalized to a common resolution …

Statewide Survey Of Boat-Based Recreational Fishing In Western Australia 2015/16, Karina L. Ryan, Norman G. Hall, Eva K. Lai, Claire B. Smallwood, S.M Taylor, Brent Stephen

Fisheries Research Reports

The statewide survey of boat-based recreational fishing includes three components: (i) off-site Phone Surveys (encompassing an initial Screening Survey, a longitudinal Phone-Diary Survey, and Post-Enumeration Surveys); (ii) on-site Boat Ramp Surveys; and (iii) a Remote Camera Survey.

Land Capability Assessment For Expanding Irrigated Horticulture Around Myalup, Department Of Agriculture And Food, Western Australia, Dafwa

Resource management technical reports

The Department of Primary Industry and Regional Development (DPIRD, formerly Department of Agriculture and Food, Western Australia), assessed the suitability of land for expanding irrigated horticulture around Myalup, Western Australia. The assessment builds upon existing soil-landscape mapping produced by van Gool and Kipling (1992), and Barnesby and Proulx-Nixon (2000). This report provides guidance to decision-makers and investors about areas with potential for irrigated horticulture.

The survey area for this assessment is east of Myalup, covering 37 800 hectares (ha). Johnston Road forms the northern boundary and the Brunswick River forms the southern boundary (Figure 1.1). The sandy soils of the …