Life Sciences Commons^™

Changing Antimalarial Drug Sensitivities In Uganda, Stephanie Alexis Rasmussen

Dissertations, Masters Theses, Capstones, and Culminating Projects

Dihydroartemisinin-piperaquine (DP) has demonstrated excellent efficacy for the treatment and prevention of malaria in Uganda. However, resistance to both components of this regimen has emerged in Southeast Asia. The efficacy of artemether-lumefantrine, the first-line regimen to treat malaria in Uganda, has also been excellent, but continued pressure may select for parasites with decreased sensitivity to lumefantrine. To gain insight into current drug sensitivity patterns, ex vivo sensitivities were assessed and genotypes previously associated with altered drug sensitivity were characterized for 58 isolates collected in Tororo, Uganda from subjects presenting in 2016 with malaria from the community or as part of …

Does Browsing Matter? : Predation And Population Declines In The Federally Endangered Schweinitz's Sunflower (Helianthus Schweinitzii T&G), Bryan Benson England Iii

Graduate Theses

Herbivory is a ubiquitous ecological process, yet its importance to plant community ecology and conservation biology is controversial. When Schweinitz's sunflower (Helianthus schweinitzii T&G) was listed as a federally endangered species in 1991, "Predation and Parasitism" were considered "not applicable" as threats, and it was the lack of large herbivores that was repeatedly identified as a threat to this species' survival. Two decades later, persistent negative population trends in many protected populations and anecdotal reports of "heavy browse pressure from white-tailed deer" led to suggestions that herbivory by deer could be impeding the recovery of this species. To test for …

Sport Experiences Of Division I Collegiate Athletes And Their Perceptions Of The Importance Of Specialization, Eric M. Martin, Martha E. Ewing, Evelyn Oregon

Kinesiology Faculty Publications and Presentations

The purpose of the current study was to investigate Division I athletes’ prior sport participation and athletes’ perceptions regarding sport specialization. Athletes (N = 1041) completed self-report surveys and indicated that participation in their collegiate sport began around nine years of age (M = 9.10, SD = 3.83). Athletes played a large number of sports in elementary and middle school with participation decreasing during high school. For those athletes who specialized in one sport, specialization occurred typically at 12.5 years of age. In addition, athletes past sport background and perceptions of specialization differed depending on their college sport with …

Avs Corner, December 2017, Farzana Ferdous (Advisor), Caitlin Mathews, Emily Alexander, Brooke Redmond, Meghan Courey, Erika Jones, Wendy Guzman, Peyton Voirin, Morgan Forte

AVS Corner

No abstract provided.

Does The Stress Inherent To Laboratory Life And Experimentation On Animals Adversely Affect Research Data?, Jarrod Bailey

Validation of Animal Experimentation Collection

Stress and distress in laboratory animals is often inherent and unavoidable. The effect of these factors on the reliability and relevance of experimental data is not sufficiently appreciated. Greater awareness, debate and discussion of this issue are urgently required.

Bet-Hedging In Bacteriocin Producing Escherichia Coli Populations: The Single Cell Perspective, Bihter Bayramoglu, David Toubiana, Simon Van Vliet, R. Inglis, Nadav Shnerb, Osnat Gillor

Biology Department Faculty Works

No abstract provided.

Brain Energy Homeostasis And The Regulation Of N-Acetyl-Aspartate Metabolism In Development And Disease, Samantha Zaroff

Graduate School of Biomedical Sciences Theses and Dissertations

N-acetylaspartate (NAA) is a non-invasive clinical marker of neuronal metabolic integrity because of its strong proton magnetic resonance spectroscopy (H-MRS) peak and direct correlation with energetic integrity. Specifically, NAA is used to track the progression of neurodegenerative diseases due to the characteristic reduction of whole brain levels of NAA which occur simultaneously with reduced glucose utilization and mitochondrial dysfunction, but prior to the onset of disease specific pathology. However, NAA will also significantly increase simultaneously with energetic integrity during periods of recovery or remission in applicable disorders, such as traumatic brain injuries. Unfortunately, it remains enigmatic exactly why NAA is …

Profitability Analysis Of Varying Herd Sizes Based On Price Signals In Cow-Calf Operations, Colson Tester

Agricultural Economics and Agribusiness Undergraduate Honors Theses

The third most consumed meat around the world is beef. Despite global growth in demand, cattle markets experience price cycles related to biological production lags causing variability in cash flow and profitability for producers. Price-driven herd size management strategies thus have received attention. This study adds to that literature by analyzing both price and production risk using three herd size management strategies: i) steady state – holding herd size constant; ii) dollar cost averaging – keeping reinvestment constant by varying the number of replacement heifers retained at a constant long run average dollar total; and iii) moving average – using …

Sagestep News, Fall 2017, No. 31, Sagestep

Newsletters

Seasonal newsletter of SageSTEP.

Aquaculture Development Plans, Department Of Fisheries

Fisheries Occasional Publications

Principles and Guidelines Relating to Aquaculture Development Plans to address Performance Criteria for Aquaculture Licences and Leases

Superresolution Imaging Identifies That Conventional Trafficking Pathways Are Not Essential For Endoplasmic Reticulum To Outer Mitochondrial Membrane Protein Transport., Kyle Salka, Shivaprasad Bhuvanendran, Kassandra Wilson, Petros Bozidis, Mansi Mehta, Kristin Rainey, Hiromi Sesaki, George H Patterson, Jyoti K. Jaiswal, Anamaris M. Colberg-Poley

Genomics and Precision Medicine Faculty Publications

Most nuclear-encoded mitochondrial proteins traffic from the cytosol to mitochondria. Some of these proteins localize at mitochondria-associated membranes (MAM), where mitochondria are closely apposed with the endoplasmic reticulum (ER). We have previously shown that the human cytomegalovirus signal-anchored protein known as viral mitochondria-localized inhibitor of apoptosis (vMIA) traffics from the ER to mitochondria and clusters at the outer mitochondrial membrane (OMM). Here, we have examined the host pathways by which vMIA traffics from the ER to mitochondria and clusters at the OMM. By disruption of phosphofurin acidic cluster sorting protein 2 (PACS-2), mitofusins (Mfn1/2), and dynamin related protein 1 (Drp1), …

24-Month Hiv-Free Survival Among Infants Born To Hiv-Positive Women Enrolled In Option B+ Program In Kigali, Rwanda: The Kabeho Study, Michelle Gill, Heather J. Hoffman, Dieudonne Ndatimana, Placidie Mugwaneza, Laura Guay, +Several Additional Authors

Genomics and Precision Medicine Faculty Publications

Lifelong antiretroviral therapy (ART) provision to all pregnant HIV-positive women (“Option B+”) has been recommended by the World Health Organization since 2013, but there remain limited data on the effects of Option B+ on long-term HIV-free survival in breastfeeding HIV-exposed infants. The Kigali Antiretroviral and Breastfeeding Assessment for the Elimination of HIV (Kabeho) study enrolled HIV-positive women from the third trimester of pregnancy to 2 weeks postpartum in 14 heath facilities implementing Option B+ in Kigali, Rwanda. Mother–child pairs in the longitudinal observational cohort were followed until 24 months postpartum, with HIV diagnostic testing at 6 weeks, and 9, 18 …

Plasma Fibroblast Growth Factor-21 Levels In Patients With Inborn Errors Of Metabolism, Brian Kirmse, Juan Cabrera-Luque, Omar Ayyub, Kristina Cusmano-Ozog, Kimberly A. Chapman, Marshall L. Summar

Pediatrics Faculty Publications

Fibroblast growth factor-21 (FGF21) levels are elevated in patients with primary mitochondrial disorders but have not been studied in patients with inborn errors of metabolism (IEM) known to have secondary mitochondrial dysfunction. We measured plasma FGF21 by ELISA in patients with and without IEM. FGF21 levels were higher in patients with IEM compared to without IEM (370 pg/dL vs. 0–65 pg/dL). Further study of FGF21 as a biomarker in IEM is warranted.

Synthesis And In Vitro Antimycobacterial Activity Of Novel N-Arylpiperazines Containing An Ethane-1,2-Diyl Connecting Chain, Tomás Gonec, Ivan Malík, Jozef Csöllei, Josef Jampílek, Jirina Stolaríková, Ivan Solovic, Peter Miku, Stanislava Keltoová, Peter Kollár, Jim O'Mahony, Aidan Coffey

Department of Biological Sciences Publications

© 2017 by the authors. Novel 1-(2-{3-/4-[(alkoxycarbonyl)amino]phenyl}-2-hydroxyethyl)-4-(2-fluorophenyl)-piperazin-1-ium chlorides (alkoxy = methoxy to butoxy; 8a-h) have been designed and synthesized through multistep reactions as a part of on-going research programme focused on finding new antimycobacterials. Lipophilic properties of these compounds were estimated by RP-HPLC using methanol/water mobile phases with a various volume fraction of the organic modifier. The log kw values, which were extrapolated from intercepts of a linear relationship between the logarithm of a retention factor k (log k) and volume fraction of a mobile phase modifier (jM), varied from 2.113 (compound 8e) to 2.930 (8h) and indicated relatively high …

Short-Term Toxicity Of 1-Methylnaphthalene To Americamysis Bahia And 5 Deep-Sea Crustaceans, Anthony H. Knap, Nicholas R. Turner, Gopal Bera, Dorothy-Ellen A. Renegar, Tamara Frank, Jose Sericano, Bernhard Riegl

Marine & Environmental Sciences Faculty Articles

There are few studies that have evaluated hydrocarbon toxicity to vertically migrating deep-sea micronekton. Crustaceans were collected alive using a 9-m² Tucker trawl with a thermally insulated cod end and returned to the laboratory in 10 °C seawater. Toxicity of the polycyclic aromatic hydrocarbon 1-methylnaphthalene to Americamysis bahia, Janicella spinacauda, Systellaspis debilis, Sergestes sp., Sergia sp., and a euphausiid species was assessed in a constant exposure toxicity test utilizing a novel passive dosing toxicity testing protocol. The endpoint of the median lethal concentration tests was mortality, and the results revealed high sensitivity of the deep-sea micronekton …

Establishment Of Lateral Organ Asymmetries In The Invertebrate Chordate, Ciona Intestinalis, Karl Palmquist , '17, Bradley Justin Davidson , '91

Biology Faculty Works

Background: The evolutionary emergence and diversification of the chordates appear to involve dramatic changes in organ morphogenesis along the left/right axis. However, the ancestral chordate mechanism for establishing lateral asymmetry remains ambiguous. Additionally, links between the initial establishment of lateral asymmetry and subsequent asymmetries in organ morphogenesis are poorly characterized. Results: To explore asymmetric organ morphogenesis during chordate evolution, we have begun to characterize left/right patterning of the heart and endodermal organs in an invertebrate chordate, Ciona intestinalis. Here, we show that Ciona has a laterally asymmetric, right-sided heart. Our data indicate that cardiac lateral asymmetry requires H+/K+ ion flux, …

Human Metapneumovirus Induces Formation Of Inclusion Bodies For Efficient Genome Replication And Transcription, Nicolás P. Cifuentes-Muñoz, Jean Branttie, Kerri Beth Slaughter, Rebecca Ellis Dutch

Molecular and Cellular Biochemistry Faculty Publications

Human metapneumovirus (HMPV) causes significant upper and lower respiratory disease in all age groups worldwide. The virus possesses a negative-sense single-stranded RNA genome of approximately 13.3 kb encapsidated by multiple copies of the nucleoprotein (N), giving rise to helical nucleocapsids. In addition, copies of the phosphoprotein (P) and the large RNA polymerase (L) decorate the viral nucleocapsids. After viral attachment, endocytosis, and fusion mediated by the viral glycoproteins, HMPV nucleocapsids are released into the cell cytoplasm. To visualize the subsequent steps of genome transcription and replication, a fluorescence in situ hybridization (FISH) protocol was established to detect different viral RNA …

Individual, Ecological, And Anthropogenic Influences On Activity Budgets Of Long-Finned Pilot Whales, Saana Isojunno, D. Sadykova, Stacy L. Deruiter, C. Cure

University Faculty Publications and Creative Works

Time allocation to different activities and habitats enables individuals to modulate their perceived risks and access to resources and can reveal important trade-offs between fitness-enhancing activities (e.g., feeding vs. social behavior). Species with long reproductive cycles and high parental investment, such as marine mammals, rely on such behavioral plasticity to cope with rapid environmental change, including anthropogenic stressors. We quantified activity budgets of free-ranging long-finned pilot whales in order to assess individual time trade-offs between foraging and other behaviors in different individual and ecological contexts, and during experimental sound exposures. The experiments included 1-2 and 6-7 kHz naval sonar exposures …

Is The State Of The Air-Sea Interface A Factor In Rapid Intensification And Rapid Decline Of Tropical Cyclones?, Alexander Soloviev, Roger Lukas, Mark A. Donelan, Brian K. Haus, Isaac Ginis

Marine & Environmental Sciences Faculty Articles

Tropical storm intensity prediction remains a challenge in tropical meteorology. Some tropical storms undergo dramatic rapid intensification and rapid decline. Hurricane researchers have considered particular ambient environmental conditions including the ocean thermal and salinity structure and internal vortex dynamics (e.g., eyewall replacement cycle, hot towers) as factors creating favorable conditions for rapid intensification. At this point, however, it is not exactly known to what extent the state of the sea surface controls tropical cyclone dynamics. Theoretical considerations, laboratory experiments, and numerical simulations suggest that the air-sea interface under tropical cyclones is subject to the Kelvin-Helmholtz type instability. Ejection of large …

The Effect Of Pet Ownership On Esl Students’ U.S. Academic Success, Emily Benjumea

Animal Science Undergraduate Honors Theses

This study examines the academic success of English as a second language (ESL) students based on ownership of and/or relationship with a pet, due to pets’ ability to benefit and support their owners. A survey was compiled for middle school, ESL students in the Fayetteville, Arkansas school district. The goal of the study was to discover if pet ownership has an effect on ESL student academic success in terms of the academic, social, and emotional aspects of school. It was found that pets aid in some academic aspects of school but more so in the social and emotional aspects such …

Diversification On Continents And Islands: A Herpetological Perspective, Kyle Anthony O'Connell

Biology Dissertations - Archive

This dissertation seeks to understand the geological and climatological processes that have promoted diversification on continental and island systems. Using molecular genetic data generated using Sanger sequencing and Next Generation Sequencing platforms, I conduct phylogenetic and biogeographic analyses, estimate gene flow, and conduct species delimitation. Using these analyses, I explore diversification processes on continents and islands using reptile and amphibian systems. In Chapter 2 I evaluate the role of geographical features to whipsnake diversification. Chapter 3 resolves the taxonomy of several poorly understood whipsnakes species and tests the effect of missing data on species delimitation. Chapter 4 investigates the biogeographical …

Efficacy Of Two Hortiled Fixtures, Jakob Johnson, Paul Kusuma, Bruce Bugbee

Controlled Environments

We tested the efficacy of the Full Spectrum and Red-Blue HORTILED TOP LED fixtures manufactured by PL Light. Both fixtures had an 80° light distribution.

The efficacy of the fixtures was measured using flat plane integration as described by Nelson and Bugbee (2014)¹ (see adjacent photo). The fixtures were suspended at 0.65 m above the floor in a 3 × 3 m room with flat black walls. The photosynthetic photon flux density (PPFD, μmol · m^-2 · s^-1) was measured with a recently calibrated quantum sensor (LI-COR model 190R). Measurements were made 2.5 cm apart near …

Heritable Sperm Chromatin Epigenetics: A Break To Remember, Ralph G. Meyer, Chelsea C. Ketchum, Mirella L. Meyer-Ficca

UAES Publications

Sperm chromatin not only has a unique structure to condense and protect the paternal DNA in transit, but also provides epigenetic information that supports embryonic development. Most of the unique sperm nuclear architecture is formed during the sweeping postmeiotic chromatin remodeling events in spermiogenesis, where the majority of nucleosomes are removed and replaced by protamines. The remaining histones and other chromatin proteins are located in structurally and transcriptionally relevant positions in the genome and carry diverse post-translational modifications relevant to the control of embryonic gene expression. How such postmeiotic chromatin-based programming of sperm epigenetic information proceeds, and how susceptible the …

The Effects Of Palmitate On The Expression Of G-Protein Coupled Receptors And Glut Transporters In Neuro2a Cells, Brian Montoya

Seton Hall University Dissertations and Theses (ETDs)

Palmitate (PA) is a saturated fatty acid that has been reported to be elevated in individuals with metabolic syndromes. The effects of fatty acids on the expression of various fatty acid receptors on neuronal cells is unknown, as is the effects of fatty acids on GLUT transporters. In this study, Neuro-2a (N2a) cells were treated with either 300μM of bovine serum albumin (BSA) or 300μM of palmitate conjugated to BSA (PA) at various time points to determine the effect of palmitate on the expression of various fatty acid receptors and GLUT transporters. RNA isolation followed by RT-PCR with primers specific …

Synchronization Of Reproduction In Deertoe Mussel (Truncilla Truncata), Kendell R. Loyd

Graduate Theses/Dissertations

Freshwater mussels, Order Unionoida, are diverse and widespread in North America but have suffered general decline and many extinctions in recent decades. The reproductive biology of Unionoida is complex and may be vulnerable to human impacts. Male mussels release aggregates of sperm called spermatozeugmata that drift downstream. Females obtain spermatozeugmata from the water and brood the fertilized eggs internally during development. Many aspects of general reproductive biology are poorly understood, including the mechanisms that coordinate spawning and the route by which sperm meet eggs in the female. The present study focuses on reproduction in the Deertoe (Truncilla truncata), …

Effects Of Ocean Warming And Acidification On Fertilization Success And Early Larval Development In The Green Sea Urchin, Lytechinus Variegatus, Brittney L. Lenz

HCNSO Student Theses and Dissertations

Climate change is predicted to affect the larval stages of many marine organisms. Ocean warming can reduce larval survival and hasten larval development, whereas ocean acidification can delay larval development. Ocean acidification is especially concerning for marine organisms that develop and grow calcified shells or skeletons in an environment undersaturated with calcium carbonate minerals. This study assessed the effects of ocean warming and acidification on the fertilization and larval development of the green sea urchin, Lytechinus variegatus, a tropical species common in Florida and the Caribbean. After spawning, gametes were fertilized and embryos/larvae were reared at: 1) 28°C and …

Variation In Coral Recruitment And Juvenile Distribution Along The Southeast Florida Reef Tract, Leah M. Harper

HCNSO Student Theses and Dissertations

Coral recruitment in Southeast Florida is being outpaced by mortality, resulting in population declines in many species. Identifying the coral species most likely to recruit and survive on Southeast Florida reefs and evaluating spatial variation in recruitment and survivorship is crucial for managing decreasing coral populations. This study focuses on 12 sites in Broward and Miami-Dade counties that have served as long-term stations for monitoring adult coral cover and demographics. At each site, thirty-two 225cm² grooved terracotta settlement tiles were attached to the substrate in winter of 2015 and retrieved in winter of 2016 to evaluate scleractinian and octocoral …

Improving Hpv Vaccination Series Initiation Rates And Compliance Among Indigent Women In South Texas, Ages 19-26, Through Provider Recommendation And Additional Clinic Funding: A Quality Improvement Project, Lacey Cudd

Doctor of Nursing Practice

The purpose of this quality improvement project was to increase human papillomavirus vaccination series initiation rates among indigent women, ages 19-26, at a clinic in South Texas. The human papillomavirus is a sexually transmitted infection that has been associated with multiple types of cancers. Each year, approximately 6.2 million cases of the human papillomavirus infection are diagnosed; as many as 75% of all new infections occur among females 18-26 years of age. The human papillomavirus vaccination has a high efficacy in regards to cancer prevention, preventing as many as 76% of cancers with only one dose. The project included educating …

Forage News [2017-12], Department Of Plant And Soil Sciences, University Of Kentucky

Forage News

• Don't trip on Triple-19
• KY Hosting 2018 AFGC
• Hay Testing - A Wise Investment
• Determine Land Area/Distance with a Smartphone

Gastrointestinal Parasites In Captive And Free-Ranging Cebus Albifrons In The Western Amazon, Ecuador, Sarah Martin-Solano, Gabriel A. Carrillo-Bilbao, William Ramirez, Maritza Celi-Erazo, Marie-Claude Huynen, Bruno Levecke, Washington Benitez-Ortiz, Bertrand Losson

All Faculty Scholarship for the College of the Sciences

Currently, there is a lack of surveys that report the occurrence of gastrointestinal parasites in the whiteheaded capuchin monkey (Cebus albifrons). We therefore assessed the presence and richness (= number of different parasite genera) of parasites in C. albifrons in wildlife refuges (n = 11) and in a free-ranging group near a human village (n = 15) in the Ecuadorian Amazon. In the 78 samples collected (median of 3 samples per animal), we identified a total of 6 genera of gastrointestinal parasites, representing protozoa, nematodes, acanthocephalans and cestodes. We observed a high prevalence (84%) across the 26 individuals, with the …