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Master's Theses

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Full-Text Articles in Life Sciences

In Vivo And In Vitro Digestibility Of A Complete Pelleted Feed In Horses, Cassandra Renee Sweeney Aug 2012

In Vivo And In Vitro Digestibility Of A Complete Pelleted Feed In Horses, Cassandra Renee Sweeney

Master's Theses

ABSTRACT

COMPLETION OF AN IN VIVO DIGESTIBILITY TRIAL IN HORSES AND IN VITRO DIGESTIBILITY ASSAY DEVELOPMENT

Cassandra Renee Sweeney

In vivo analysis of equine feed digestibility has been the gold standard since the late 1800's, although it can be time consuming, costly, and labor intensive. In vitro digestibility analysis may be more economical and beneficial to both feed manufacturers and consumers. The availability of accurate in vivo data is crucial for critical evaluation and validation of any potential in vitro method (Coles et al., 2005). Ten adult American quarter horse geldings were used in the in vivo digestibility evaluation of …


Effects Of Compost, Legume Cover Cropping And Vermicompost Extract Foliar Applications On Nutrition And Yield Of Washington Navel Oranges, William Payton Carling Aug 2012

Effects Of Compost, Legume Cover Cropping And Vermicompost Extract Foliar Applications On Nutrition And Yield Of Washington Navel Oranges, William Payton Carling

Master's Theses

ABSTRACT

Effects of Compost, Legume Cover Cropping and Vermicompost Extract Foliar Applications on Nutrition and Yield of Washington Navel Oranges

William Payton Carling

An experiment was conducted to test the effects of four treatments on Washington navel orange (Citrus sinensis) trees in regards to nutrient content of the leaves and fruit, soil nutrient content and properties, and fruit yield. The four treatments included: compost (C) and vermicompost extract foliar (VEF) applications, legume cover cropping (LCC) and VEF applications, VEF applications, and a control. The treatments were implemented from February 2010 to April 2011 and sampling occurred in May …


Effects Of Hurricane Disturbance On The Stopover Ecology Of Intercontinental Landbird Migrants In Coastal Louisiana, Emily Johanna Lain Aug 2012

Effects Of Hurricane Disturbance On The Stopover Ecology Of Intercontinental Landbird Migrants In Coastal Louisiana, Emily Johanna Lain

Master's Theses

Few studies have considered the impact of weather events on migratory birds during stopover, and essentially none on how hurricanes affect their stopover biology during spring passage. About two thirds of eastern North American forest breeding bird species migrate twice annually between temperate breeding areas and subtropical and tropical wintering grounds, and movement in relation to the Gulf of Mexico (GOM) is a conspicuous and important part of that migration system. During inclement weather or winds inconsistent with travel direction, migratory birds oft.en/a/lout and concentrate by the thousands in forest patches that occur along the northern coast of the GOM. …


Evaluating Macrobenthic Indicators Of Organic Enrichment And Hypoxia Within The Coastal Mississippi Hypoxic Zone, Daneen P. Menke Aug 2012

Evaluating Macrobenthic Indicators Of Organic Enrichment And Hypoxia Within The Coastal Mississippi Hypoxic Zone, Daneen P. Menke

Master's Theses

Macrobenthic communities offer effective indicators of biotic integrity, but their use for distinguishing anthropogenic from natural stress is tricky because coastal taxa are eurytolerant. Effective coastal management calls for benthic indicators that respond to specific stressors, apply across different habitats, and reflect ecosystem function. Macrobenthic process metrics based on body-size descriptors should reflect ecosystem function and be useful for assessing the effects of eutrophication. Functional trait analysis should reflect the functional diversity of the community. Coastal Mississippi experienced widespread and sustained hypoxia throughout summer 2008. Site 6 located on the 10-m isobath in the center of the 2008 hypoxic zone …


Phase Speciation Of Carbohydrates And Dioxins In Rivers And Coastal Waters In The Northern Gulf Of Mexico, Kusumica Mitra Aug 2012

Phase Speciation Of Carbohydrates And Dioxins In Rivers And Coastal Waters In The Northern Gulf Of Mexico, Kusumica Mitra

Master's Theses

Dissolved carbohydrates (d-CHO), including monosaccharide (MCHO) and polysaccharides (PCHO), and particulate carbohydrates (p-CHO) are major components of natural organic matter and play an important role in biogeochemical cycles of carbon and other trace elements in marine environments. This study aimed to examine the abundance and partitioning of CHO between dissolved and particulate phases and their seasonal variations in the Mississippi Sound/Bight and Lake Pontchartrain. Laboratory mixing experiments were also carried out to examine the behaviour of CHO species along a salinity gradient. The phase partitioning of dioxin among three different phases, i.e., colloidal organic matter, particulate organic matter and sediments, …


Determining The Trophic Role Of Gulf Menhaden (Brevoortia Patronus) Using Carbon And Nitrogen Stable Isotopes, Zachary Olsen Aug 2012

Determining The Trophic Role Of Gulf Menhaden (Brevoortia Patronus) Using Carbon And Nitrogen Stable Isotopes, Zachary Olsen

Master's Theses

Gulf menhaden (Brevoortia patronus) play multiple roles in the Gulf of Mexico coastal ecosystem as filter feeders and as an important food source for many recreationally and economically important finfish. Gulf menhaden also support a large commercial fishery, and little is known about the impact of fishing on the role of this species as a filter feeder in the food web. This study examines the spatial, temporal and ontogenetic dynamics of food selectivity and trophic role observed in Gulf menhaden. The most important dietary item for juvenile fish was found to be phytoplankton (75.7% dietary composition) while that of subadults …


Anode Material Testing For Marine Sediment Microbial Fuel Cells, Andrew John Quaid Aug 2012

Anode Material Testing For Marine Sediment Microbial Fuel Cells, Andrew John Quaid

Master's Theses

Research on the power production of the microbial fuel cell has increased in the past decade. The sediment microbial fuel cell is a type of fuel cell that uses the environment of submerged sediments to provide a natural voltage difference. The fuel cell is comprised of an anode buried in the sediment and a cathode that is held in the overlying water column. The process of electron transfer to the anode is catalyzed by anaerobic bacteria in the sediment. The anaerobic bacteria have that are able to catalyze the electron transfer have been termed exoelectrogenic. The increase in scientific research …


Immunostimulatory And Cellular Toxic Effects Of Single-Stranded Rna On Cancer Cells, Chengwen Teng Aug 2012

Immunostimulatory And Cellular Toxic Effects Of Single-Stranded Rna On Cancer Cells, Chengwen Teng

Master's Theses

Whether 5'-triphosphate-single-stranded-RNA (5 '-ppp-ssRNA) is immunostimulatory was controversial in the literature. In order to clarify the immunostimulatory effect of 5'-ppp-ssRNA, we synthesized ssRNAs and tested the IFNp (interferon-beta) level and cellular toxicity of ssRNAs in SKOV3 cells. In this work, we confirmed that 5'-ppp-ssRNA (~ 60nt) was immunostimulatory and toxic in SKOV3 cells. 5'-ppp-ssRNA (~ 60nt) led to IFN-P induction and apoptosis in SKOV3 cells. Longer 5' ppp- ssRNA tended to have a higher immunostimulatory effect and cellular toxicity than shorter 5'-ppp-ssRNA. 5'-ppp-ssRNA was more immunostimulatory and toxic than 5'- 0H-ssRNA. If the incubation time of ssRNAs increased, the toxicity …


Aloe Striata Plant Defense Compounds Produced In Response To Jasmonic Acid, Salicylic Acid, And Eriophyid Mite Salivary Extract Elicitor Compounds, Fritz Light Aug 2012

Aloe Striata Plant Defense Compounds Produced In Response To Jasmonic Acid, Salicylic Acid, And Eriophyid Mite Salivary Extract Elicitor Compounds, Fritz Light

Master's Theses

Aloe mites are herbivores of the genus Aloe (ALOACEAE) and are associated with hyperplastic growth in various aloe species, but the biochemistry of this interaction is poorly understood. In an effort to characterize plant defense responses to herbivory in the genus Aloe, a salivary extract was isolated from aloe mites (Aceria aloinis Keifer) and its bioactivity was tested using a hypocotyl elongation assay. Subsequently, Aloe striata plants were treated with jasmonic acid (JA), salicylic acid (SA), and the mite salivary extract. Using water and methanol, compounds of different polarity were extracted from aloe tissues that had been frozen …


Dietary Protein Influences Paracellular Calcium Transport: Two Molecular Targets, Belinda M. Kotler Jul 2012

Dietary Protein Influences Paracellular Calcium Transport: Two Molecular Targets, Belinda M. Kotler

Master's Theses

The effect of dietary protein on bone health remains controversial. We have shown that increasing dietary protein increases calcium absorption in both humans and rats with no change in bone resorption. We used a rat model in which dietary protein increases intestinal calcium absorption and whole body calcium retention, to explore the molecular basis for this effect. Female Sprague-Dawley rats were fed a low (5%) or high (40%) protein diet for 7 days. On day 7, duodenal mucosa was harvested and total RNA isolated. Microarray analyses using these RNA samples identified 208 genes whose expression was at least 1.5 fold …


Diffusion Barriers Of The Lateral Ventricular System, Anitha Saravanakumar Jul 2012

Diffusion Barriers Of The Lateral Ventricular System, Anitha Saravanakumar

Master's Theses

Adult neurogenesis in mammalian brain has become a well-accepted phenomenon. The neural stem cells in the sub ventricular zone (SVZ) along the lateral wall of the lateral ventricle, the largest germinal center of adult neurogenesis, are maintained by the neural stem cell niche. One prominent feature of the niche is its close proximity to the cerebral spinal fluid (CSF). The role of micromolecules (such as ions, water and gases) present in the CSF and diffusing through the lateral ventricular wall and how the stem cell micro-environment is maintained is poorly understood. The cytoarchitecture of the lateral ventricular wall with a …


Enhanced Hydrocarbon Biodegradation Using Bioaugmentation With Biowish™-Aqua Fog, Michael Robert Lehrer Jun 2012

Enhanced Hydrocarbon Biodegradation Using Bioaugmentation With Biowish™-Aqua Fog, Michael Robert Lehrer

Master's Theses

This study was done to determine the effectiveness of a commercially available bioaugmentation product, BiOWiSHTM-Aqua FOG, for remediating petroleum-contaminated sandy soil. Biodegradation enhancement by BiOWiSHTM-Aqua FOG was evaluated in laboratory microcosms by directly measuring total petroleum hydrocarbon (TPH) and indirectly using respirometry. Attempts were made to enrich hydrocarbon-degrading bacteria in BiOWiSHTM-Aqua FOG, and the resulting enrichment cultures were screened using respirometry as well. Potential hydrocarbon-degrading bacteria in BiOWiSHTM-Aqua FOG were isolated. Experiments were performed at bench-scale using microcosm bottles containing sand contaminated with either motor oil or No. 2 diesel fuel. The …


Mapping Plant Biodiversity Hotspots At The County Scale: A New Tool For Establishing Resource Conservation Strategies, Kristie Haydu Jun 2012

Mapping Plant Biodiversity Hotspots At The County Scale: A New Tool For Establishing Resource Conservation Strategies, Kristie Haydu

Master's Theses

Myers first identified the world’s 25 biodiversity hotspots and pioneered innovative ideas about the usefulness of biodiversity models for establishing long-term resource conservation strategies at global scales. Since Myers, most of the subsequent studies using hotspot science for biodiversity modeling have used large spatial scales like countries, provinces or states, and other biogeoraphic regions. The California Floristic Province continues to be one of the recognized global biodiversity hotspots. Our study site, San Luis Obispo County is within this hotspot and we created a map of plant biodiversity hotspots at the county scale using GIS technology. We wanted to determine the …


Seasonal Food Habits Of Burrowing Owls (Athene Cunicularia) In Human-Altered Landscapes, Carie Marie Wingert Jun 2012

Seasonal Food Habits Of Burrowing Owls (Athene Cunicularia) In Human-Altered Landscapes, Carie Marie Wingert

Master's Theses

In 2004, I initiated a year-long study to investigate the food habits of burrowing owls (Athene cunicularia). Burrowing owls have been found in a variety of human-altered landscapes; however, little is known about burrowing owl food habits in urban landscapes. Burrowing owl food habits during the non-breeding season are also largely undocumented, despite increasing concern over the survival of overwintering burrowing owls. Differences in prey consumption between reproductive and non-reproductive owls during the breeding season have not yet been examined. I collected pellets over a 12 month period at four study sites affected by different levels of human …


A Proteomic Analysis Of Differentiation In The Mammary Epithelium, Laura Therese Strand Jun 2012

A Proteomic Analysis Of Differentiation In The Mammary Epithelium, Laura Therese Strand

Master's Theses

While a great deal is known about the changing hormonal environment and the structural development of the mammary gland from pregnancy to lactation, very little is known about the molecular mechanisms governing differentiation of the mammary epithelium into a milk-secreting phenotype. It is important to acknowledge the diversity among the mammary glands of different species in order to better understand applications in human health and the dairy industry. In this study, we examined global protein expression during two states of differentiation in mammary epithelial cells from two species: in vitro proliferating and differentiated MAC-T cells (a bovine immortal cell-line), and …


Synthesis Of S-Ribosyl-L-Homocysteine And Analogs Modified At The Homocysteine-C3 Position, Ruoyi Liu May 2012

Synthesis Of S-Ribosyl-L-Homocysteine And Analogs Modified At The Homocysteine-C3 Position, Ruoyi Liu

Master's Theses

Quorum sensing (QS) is a process of bacterial cell-to-cell communication that conveys population density information in order to coordinate gene expression to produce synchronized behaviors. QS regulates the expression of virulence genes in many species of bacteria; hence, the manipulation of QS pathways may lead to treatment options against many bacterial diseases. The LuxS enzyme converts S-ribosyl-L-homocysteine (SRH) into homocysteine (HCys) and 4(S),5-dihydroxypentane-2,3-dione (DPD), which is the precursor of autoinducer-2 (AI-2). Thus, inhibitors of LuxS could prevent QS by halting the conversion of SRH to AI-2 rendering the cell “uncommunicative”. This work shows the successful chemical synthesis …


The Secondary School Football Coach’S Relationship With The Athletic Trainer And Their Perspectives On The Recognition And Prevention Of Exertional Heat Stroke, William M. Adams May 2012

The Secondary School Football Coach’S Relationship With The Athletic Trainer And Their Perspectives On The Recognition And Prevention Of Exertional Heat Stroke, William M. Adams

Master's Theses

No abstract provided.


Educational Prepardness Of Entry-Level Athletic Trainers Regarding Preventing Sudden Death And Emergency Procedures, Thomas M. Yabor May 2012

Educational Prepardness Of Entry-Level Athletic Trainers Regarding Preventing Sudden Death And Emergency Procedures, Thomas M. Yabor

Master's Theses

No abstract provided.


Cholesterol Lowering Effects Of Milk With Added Phytosterols, Laura Kells Cusack May 2012

Cholesterol Lowering Effects Of Milk With Added Phytosterols, Laura Kells Cusack

Master's Theses

Foods incorporating plant sterols (PS) reduce Low-density lipoprotein (LDL) on average approximately 10%. PS with a higher lipid solubility may promote greater reductions. We examined the cholesterol lowering effect of a novel triglyceride recrystallized phystosterol (TRP). Twenty subjects (mean ± SD; age, 56 ± 10 years; BMI, 27 ± 5) with elevated LDL (>100 mg/dL) participated in three 4-week phases; Phase I, 2% milk; Phase II, milk with 2.0 grams (g) free PS; Phase III, milk with 2.0 g TRP. Before and after each phase two fasting blood draws were obtained for determination of serum cholesterol. Between the 2% …


An Approach For Use Of Dual Frequency Identification Sonar (Didson) To Quantify Behavioral Aspects Of Piscivory At Ecologically Relevant Time And Space Scales, Victoria E. Price May 2012

An Approach For Use Of Dual Frequency Identification Sonar (Didson) To Quantify Behavioral Aspects Of Piscivory At Ecologically Relevant Time And Space Scales, Victoria E. Price

Master's Theses

Predator-prey interactions of large vagile fishes are difficult to study in the ocean due to limitations in the space and time requirements for observations. Small-scale direct underwater observations by divers (<10m >radius) and large-scale hydroacoustic surveys (10s - 100s km2) are traditional approaches. However, large piscivorous predators identify and attack prey at the scale of meters to tens of meters. Dual- Frequency Identification Sonar, or DIDSON, is a high-resolution acoustic camera operating in the MHz range that provides detailed continuous video-like imaging of objects out to 30 m range. This technology can be used to observe predator-prey interactions at ecologically …


The Effects Of Phytosterols On Lipoprotein Particle Size, Laura J. Kunces May 2012

The Effects Of Phytosterols On Lipoprotein Particle Size, Laura J. Kunces

Master's Theses

Phytosterols (PS) have become a recent popular medication alternative for treatment of hypercholesterolemia and have proven effective. Whether PS decrease risk of cardiovascular disease through other mechanisms, such as lipoprotein particle size and inflammatory markers, remains unclear. PURPOSE: The primary aim of this study was to examine the effects of two forms of PS in milk on lipoprotein particle size, inflammatory markers and fat-soluble vitamins. METHODS: Twenty subjects (13 males, 7 females; age; 55±6.1 years, height; 169±10 cm, weight; 77.9±16.9 kg, BMI; 27.3) consumed 16oz of cow’s milk daily for 12 weeks. The three sequential four-week phases consisted of 2% …


An Investigation Of Fraxinus Americana Branch Sway Using A 3 Dimensional Motion Capture System, Anna T. Campiformio May 2012

An Investigation Of Fraxinus Americana Branch Sway Using A 3 Dimensional Motion Capture System, Anna T. Campiformio

Master's Theses

Abstract

Wind is a dominant abiotic factor that a tree experiences throughout its lifetime and can cause severe tree damage, resulting in risk of injury to humans, and economic and ecological losses. It is thought that trees develop structural properties and architectures that help withstand loading conditions by dissipating wind energy through damping mechanisms. The role of branch motion in reducing potential dangerous wind loads has been the focus of relatively few studies. Even fewer studies have examined tree sway response to natural wind loaded conditions. In this investigation, branch frequencies were calculated for three Fraxinus americana using a three-dimensional …


Evaluation Of Viability Of Lactobacillus Acidophilus La-5 During Simulated Digestion Process Using A Dynamic In Vitro Model, Jenifer Tharani May 2012

Evaluation Of Viability Of Lactobacillus Acidophilus La-5 During Simulated Digestion Process Using A Dynamic In Vitro Model, Jenifer Tharani

Master's Theses

In recent years, there has been an upsurge in medical research assessing the therapeutic benefits of probiotic bacteria and growing commercial interest in food fortification with these bacteria. Probiotic bacteria such as L. acidophilus are known to be predominant Lactobacilli species in the intestinal tract of healthy humans and suggested to provide clinical health benefits such as enhancement of immunity against intestinal infections, prevention of diarrhea and hypercholesterolaemia and improvement in lactose utilization. Many studies have demonstrated the possibility of incorporating probiotic bacteria in an ice cream matrix and shown its viability can be maintained throughout the shelf life of …


American Pika (Ochotona Princeps): Persistence And Activity Patterns In A Changing Climate, Cody P. Massing May 2012

American Pika (Ochotona Princeps): Persistence And Activity Patterns In A Changing Climate, Cody P. Massing

Master's Theses

An increasing amount of evidence suggests that as temperatures increase, montane animals are moving upward in elevation (IPCC 2007, Parmesan and Yohe 2003). As suitable habitats rise in elevation and then disappear altogether, these animals could be pushed to extinction. The American pika, Ochotona princeps, is a montane mammal that lives in western North America, usually at elevations above 1500 m (Smith and Weston 1990). Recent evidence suggests that pika population numbers are dropping in response to rising temperatures (Beever et al. 2010). The pika is a small herbivorous lagomorph, a relative of hares and rabbits. Its habitat is …


Detection Of Sk2 Channels On Hippocampal Neurons, Jamie L. Maciaszek Apr 2012

Detection Of Sk2 Channels On Hippocampal Neurons, Jamie L. Maciaszek

Master's Theses

Calcium-activated small conductance potassium channels (SK) are crucial for synaptic plasticity, sleep, and learning and memory (Hammond, Bond et al. 2006; Cueni, Canepari et al. 2008; Lin, Lujan et al. 2008). Despite the recent progress on SK channel physiology, the precise spatial organization of SK channels in neurons has remained unknown. Such knowledge is critical as the subcellular distribution of SK channels is an important determinant of neuronal excitability. Currently, there are no techniques to image ion channel distribution quantitatively at the nanometer scale in living cells. Here, it is demonstrated that integration of natural toxins with single molecule atomic …


Investigation Of Bacillus Subtilis As A Biopesticide Against Botrytis Cinerea, Kenneth K. Ng Apr 2012

Investigation Of Bacillus Subtilis As A Biopesticide Against Botrytis Cinerea, Kenneth K. Ng

Master's Theses

The objective of this thesis was to investigate BiOWiSHTM-Aqua, a commercial dry solid formulation containing a consortium of bacteria and yeast, as a biopesticide for treatment of Botrytis cinerea, a gray mold that affects strawberries. BiOWiSHTM-Aqua was compared with another commercial product specifically used as a fungicide and bacteriocide, Serenade® Garden Disease Control Spray (concentrated Bacillus subtilis strain QST 713). Both laboratory tests as well as in vivo lab tests were conducted. BiOWiSHTM-Aqua results varied widely from plate to plate, regardless of experimental conditions. In some of these plates, inhibition zones were observed …


Strawberry Growth, Yield, Fruit Nutrition, And Control Of Verticillium Wilt With Pre-Plant Soil Fumigants, Ozone, And Biological Control, Justin J. Scurich Apr 2012

Strawberry Growth, Yield, Fruit Nutrition, And Control Of Verticillium Wilt With Pre-Plant Soil Fumigants, Ozone, And Biological Control, Justin J. Scurich

Master's Theses

Verticillium wilt is a widespread soilborne disease of strawberry historically controlled by soil fumigation with methyl bromide (MB). MB was banned by the United Nations in 1995 and will be completely phased out by 2015. Research has concentrated on alternative methods of disease control without finding a single alternative able to replace MB in widespread disease control and yield increase. For the current study, strawberries were greenhouse grown in container pots filled with soil from both infested and non-infested areas of a commercial strawberry field in Watsonville, CA. Treatments included pre-plant soil fumigation with commercially available formulations of methyl bromide, …


The Proteomic Response Of Sea Squirts (Genus Ciona Congeners) To Hyposalinity Stress, James S. Koman Mar 2012

The Proteomic Response Of Sea Squirts (Genus Ciona Congeners) To Hyposalinity Stress, James S. Koman

Master's Theses

The ascidian species Ciona savignyi and C. intestinalis are invasive species but show interspecific differences in their population response to hypo-saline stress associated with heavy winter-run off events that are predicted to become more frequent due to climate change. Despite an almost world-wide distribution, C. intestinalis seems to be more susceptible to hypo-saline stress than the geographically more limited C. savignyi. Given that the genomes of both species are fully sequenced, we were able to compare their proteomic response to both acute and chronic salinity to characterize the mechanisms that are responsible for setting tolerance limits to hyposaline conditions …


Vitamin D Sub-Set Analysis From The Flash Study, Megan Bishop, Laura Hall, Ann Mcdermott, Aydin Nazmi Mar 2012

Vitamin D Sub-Set Analysis From The Flash Study, Megan Bishop, Laura Hall, Ann Mcdermott, Aydin Nazmi

Master's Theses

Vitamin D is important to the health of college students. The objective of our study was to measure sun exposure, skin pigmentation, vitamin D intake, and serum 25-hydroxyvitamin D (25[OH]D) in a subset of participants from The Following the Longitudinal Aspects of Student Health (FLASH) Study to determine the best predictors of 25(OH)D status. Participants were college-aged freshman who had their blood drawn in spring (Visit 1) and fall 2010 (Visit 2) at California Polytechnic State University (Cal Poly), San Luis Obispo, CA. (35.3°N). Vitamin D intake was measured using a 28-day food frequency recall questionnaire (specific to vitamin D …


Comparing The Demographics Of Two Steelhead Populations And Their Habitat Characteristics, Eileen Ann Baglivio Mar 2012

Comparing The Demographics Of Two Steelhead Populations And Their Habitat Characteristics, Eileen Ann Baglivio

Master's Theses

Currently, little is known about the demographics of the Oncorhynchus mykiss irideus, or steelhead trout, populations in San Luis Obispo County. Specifically, demographic information including length, age, and condition when first leaving a watershed for the open ocean is lacking. This thesis takes a closer look at a biological and environmental data collected by the California Department of Fish and Game Central Coast Steelhead and Coho Salmon project under the direction of Associate Biologist Jennifer Nelson. The main goal of this thesis is to analyze demographic and habitat data from the steelhead populations of two northern San Luis Obispo …