Life Sciences Commons^™

Reproductive Parameters And Female Breeding Season Survival Of Rio Grande Wild Turkeys In South Central Texas, Jacob White

LSU Master's Theses

Historically, Rio Grande wild turkeys in south central Texas have been at lower densities than other portions of the state. Within the Oak-Prairie Wildlife District of Texas, Rio Grande wild turkey regulatory restrictions are different for counties in the eastern and western portions of the ecoregion. Due to perceived increases in turkey density in the eastern portion of the ecoregion (hereafter 1-bird zone), Texas Parks and Wildlife Department (TPWD) considered increasing the bag limit to match counties in the western portion of the district (hereafter 4-bird zone) in order to increase hunting opportunities. However, if regulatory changes are to be …

Nlrp6 In Gram-Positive Pneumonia And Sepsis, Laxman Ghimire

LSU Doctoral Dissertations

Acute lower respiratory infections (pneumonia) and pneumonia-derived sepsis are among the leading causes of death in the world causing 7.8 million deaths annually. In this regard, Methicillin-resistant Staphylococcus aureus (MRSA) is endemic in the US and implicated for causing high mortality-associated necrotizing pneumonia and aggravating viral pneumonia with superinfection. Additionally, sepsis is the 7^th leading cause of death among newborns in the US and is responsible for more than 750,000 hospitalization cases every year. Although there is a plethora of research in both pneumonia and sepsis, the detailed pathophysiology still remains elusive. Understanding the host defense mechanism will help …

Characterization And Amplification Of Retrotransposable Elements Platy-1 And Alu In The Cebidae Lineage Of Platyrrhine Primates, Jessica Storer

LSU Doctoral Dissertations

Alu mobile elements are much more than “junk DNA”. Inherent properties such as high copy number, small ~300 bp size, and their nearly homoplasy-free nature make these elements particularly useful in resolving primate phylogenies. In addition, shared sequence features and identity with the Alu element allow for discovery of new SINE retrotransposons, such as the Platyrrhine-limited Platy-1 element. Building on previous research of subfamily analysis, the Platy-1 and Alu elements can be used not only to explore the controversial New World monkey (NWM) phylogeny, but also the mode and tempo of their amplification in different primate genera and species.

Chapter …

Evaluation Of Reproductive Phenology And Ecology Of Wild Turkey (Meleagris Gallopavo) Across The Southeastern United States, Landon Robert Schofield

LSU Master's Theses

The primary driver of population growth and sustainability of gallinaceous birds is annual recruitment. Habitat selection by wild turkeys (Meleagris gallopavo spp.) during reproductive activities could influence production at multiple temporal and spatial scales. Vegetation conditions at nest sites that could drive nest success have not been clearly identified, which suggests that other factors may drive reproductive success.

Female wild turkeys maintain dominance hierarchies, which could influence how reproductively active females distribute themselves across the landscape during reproductive periods. Using high-frequency GPS data collected from reproductively active females, I analyzed nesting attempts for Eastern (n = 381), …

Movement Ecology Of Eastern Wild Turkeys (Meleagris Gallopavo Silvestris) And Turkey Hunters On Public Land In South Carolina, Usa, Alaina Pamela Gerrits

LSU Master's Theses

Wild turkeys (Meleagris gallapavo, hereafter turkey) are the second most pursued big game species in the United States. Turkey hunting occurs primarily during spring, and on publicly-owned lands managers monitor hunter numbers and harvest to adjust hunter opportunity. Contemporary research has shown a decline in productivity and harvest of turkeys in the Eastern United States. Studies have also found that hunting activity on public lands can influence male turkey behavior, hence research detailing hunter behaviors and hunter-wild turkey interactions is needed to better inform management activities. We found turkey hunters exhibited both stationary and active behaviors while hunting …

Ornithological Expeditions To Sarawak, Malaysian Borneo, 2007-2017, Frederick H. Sheldon, Haw Chuan Lim, Phred M. Benham, Matthew L. Brady, Clare E. Brown, Ryan C. Burner, Vivien L. Chua, John C. Mittermeier, Subir B. Shakya, Paul Van Els, Mustafa Abdul Rahman, Dency F. Gawin, Zahirunisa Abdul Rahim, Luisa Duya Setia, Robert Moyle

Occasional Papers of the Museum of Natural Science, Louisiana State University

Louisiana State University, the University of Kansas, and the Universiti Malaysia Sarawak undertook collaborative research on the evolution and ecology of Bornean birds starting in 2005. This collaboration included a series of expeditions from 2007–2017 to collect and study birds at >30 sites in Sarawak, Malaysian Borneo. Here we provide information on the study-sites and summarize the main discoveries resulting from the collaboration.

Hinge Region In Dna Packaging Terminase Pul15 Of Herpes Simplex Virus: A Potential Allosteric Target For Antiviral Drugs, Lana F. Thaljeh, J. Ainsley Rothschild, Misagh Naderi, Lyndon M. Coghill, Jeremy M. Brown, Michal Brylinski

Faculty Publications

Approximately 80% of adults are infected with a member of the herpesviridae family. Herpesviruses establish life-long latent infections within neurons, which may reactivate into lytic infections due to stress or immune suppression. There are nine human herpesviruses (HHV) posing health concerns from benign conditions to life threatening encephalitis, including cancers associated with viral infections. The current treatment options for most HHV conditions mainly include several nucleoside and nucleotide analogs targeting viral DNA polymerase. Although these drugs help manage infections, their common mechanism of action may lead to the development of drug resistance, which is particularly devastating in immunocompromised patients. Therefore, …

Louisiana Agriculture Fall, 2019, Lsu Agcenter

Louisiana Agriculture

No abstract provided.

Hinge Region In Dna Packaging Terminase Pul15 Of Herpes Simplex Virus: A Potential Allosteric Target For Antiviral Drugs, Lana F. Thaljeh, J. Ainsley Rothschild, Misagh Naderi, Lyndon M. Coghill

Faculty Publications

Approximately 80% of adults are infected with a member of the herpesviridae family. Herpesviruses establish life-long latent infections within neurons, which may reactivate into lytic infections due to stress or immune suppression. There are nine human herpesviruses (HHV) posing health concerns from benign conditions to life threatening encephalitis, including cancers associated with viral infections. The current treatment options for most HHV conditions mainly include several nucleoside and nucleotide analogs targeting viral DNA polymerase. Although these drugs help manage infections, their common mechanism of action may lead to the development of drug resistance, which is particularly devastating in immunocompromised patients. Therefore, …

The Role Of Chromatin State Transitions In Modulating Early Phosphate-Deficiency Response Genes In Plants, Maryam Foroozani

LSU Doctoral Dissertations

Phosphorus (P) is an essential plant macronutrient vital to fundamental metabolic processes. Plant-available P is low in most soils, making it a frequent limiter of growth. Declining P reserves for fertilizer production exasperates this agricultural challenge. Plants modulate complex responses to fluctuating P levels via global transcriptional regulatory networks. Although chromatin structure plays a substantial role in controlling gene expression, the chromatin-level mechanisms involved in regulating P homeostasis have not been determined.

In this work, I used chromatin immunoprecipitation (ChIP) combined with next-generation DNA sequencing (ChIP-seq) to map the distribution of H3K4me3 in rice (Oryza sativa L.) during both …

Silicon Fertilization In Rice And Wheat: Dynamics With Trace Elements And Effect Of Silicate Slag Granular Size On The Release Pattern Of Monosilicic Acid In Soil, Wooiklee S. Paye

LSU Doctoral Dissertations

Studies were conducted to evaluate the impact of silicon (Si) fertilization on the uptake of harmful trace elements in Louisiana rice production system, and document the effect of silicate slag granular size on its ability to supply Si in wheat. The influence of silicate slag and lime on the uptake and translocation of harmful trace elements in rice grain was determined. Results showed that both slag and lime had similar effects on pH at five of the nine sites investigated. Soil Si was significantly (P <0.001) increased with application of silicate slag at all sites. Lime and silicate slag had no effect on the concentration of trace elements in soil. However, increasing Si rates were negatively correlated with arsenic (As) and cadmium (Cd) concentration in rice grain. The release pattern of monosilicic acid (H₄SiO₄) from wollastonite and silicate slag was compared in a wheat greenhouse …

Fisetin, A 3,7,3 ',4 '-Tetrahydroxyflavone Inhibits The Pi3k/Akt/Mtor And Mapk Pathways And Ameliorates Psoriasis Pathology In 2d And 3d Organotypic Human Inflammatory Skin Models, Konstantin G. Kousoulas

Faculty Publications

Psoriasis is a chronic immune-mediated skin disease that involves the interaction of immune and skin cells, and is characterized by cytokine-driven epidermal hyperplasia, deviant differentiation, inflammation, and angiogenesis. Because the available treatments for psoriasis have significant limitations, dietary products are potential natural sources of therapeutic molecules, which can repair the molecular defects associated with psoriasis and could possibly be developed for its management. Fisetin (3,7,3 ',4 '-tetrahydroxyflavone), a phytochemical naturally found in pigmented fruits and vegetables, has demonstrated proapoptotic and antioxidant effects in several malignancies. This study utilized biochemical, cellular, pharmacological, and tissue engineering tools to characterize the effects of …

Histone H4 H75e Mutation Attenuates Global Genomic And Rad26-Independent Transcription-Coupled Nucleotide Excision Repair, Shisheng Li, Kathiresan Selvam, Sheikh Arafatur Rahman

Faculty Publications

Nucleotide excision repair (NER) consists of global genomic NER (GG-NER) and transcription coupled NER (TC-NER) subpathways. In eukaryotic cells, genomic DNA is wrapped around histone octamers (an H3-H4 tetramer and two H2A-H2B dimers) to form nucleosomes, which are well known to profoundly inhibit the access of NER proteins. Through unbiased screening of histone H4 residues in the nucleosomal LRS (loss of ribosomal DNA-silencing) domain, we identified 24 mutations that enhance or decrease UV sensitivity of Saccharomyces cerevisiae cells. The histone H4 H75E mutation, which is largely embedded in the nucleosome and interacts with histone H2B, significantly attenuates GG-NER and Rad26-independent …

Occurrence Of Aflatoxin And Zearalenone In Concentrate Feeds And Milk Contamination With Aflatoxin M1 And Bacterial Pathogens In Malawi, Chunala Alexico Njombwa

LSU Doctoral Dissertations

Multiple studies were conducted in Malawi to: 1) evaluate knowledge and perception of dairy farmers towards molds, mycotoxins and associated adverse effects; 2) evaluate dairy farmers’ knowledge and perception on milk contamination, proper milk handling practices and adverse health effects associated with raw milk consumption; 3) determine levels of aflatoxins and zearalenone (ZEN) in concentrate feedstuffs; 4) assess prevalence and levels of aflatoxin M₁(AFM₁) in raw milk, dietary exposure and estimate HCC risks to children and adults; 5) assess Salmonella and E. colicontamination in raw and processed milk from selected small scale farms and major …

Quantifying Impacts Of Climate Change On Species Interactions While Fostering Undergraduate Research Experiences Using The Monarch (Danaus Plexippus)- Milkweed (Asclepias Sp.) System, Matthew J. Faldyn

LSU Doctoral Dissertations

Species interactions, specifically plant-insect interactions, are ubiquitous worldwide. Climate change will alter species interactions by affecting abiotic conditions, affecting species phenologies, interaction strengths, and physiological development. However, climate change impacts are often studied using individual species, with limited consideration quantifying the direct and indirect impacts of climate change species interactions. Using lab, field, and greenhouse experiments, I investigated how climate change will directly and indirectly affect species interactions while also fostering undergraduate research experiences using the monarch butterfly (Danaus plexippus)- milkweed (Asclepias sp.) system.

In North America, a widely planted, invasive milkweed species, Asclepias curassavica, negatively …

Comparison Of The Kinetic Parameters Of Escherichia Coli 0157:H7, Listeria Monocytogenes And Salmonella Typhimurium Derived From The Baranyi And Huang Models In A Chemically Defined Minimal Medium, Jose Isidro Fuentes

LSU Master's Theses

Microbial growth can be characterized by parameters such as lag time, growth rate, and maximum population density at any specific point of time. Mathematical models that predict microbial growth of foodborne pathogens are increasingly used in the food industry as a viable alternative to traditional methods of microbial enumeration. The Baranyi model has been widely used as the primary model of choice by many authors because of its performance and accuracy. The most recently developed Huang model has been less implemented and few comparisons between the Baranyi and Huang models have been made when modeling pathogenic growth. For this research, …

Effects Of Adrenergic Or A Combination Of Adrenergic And Opioid Drugs On Assessments Of Insulin Sensitivity In Mares, Lauren Kerrigan

LSU Master's Theses

Excitement is a problem when conducting endocrine tests on fractious horses. Epinephrine (EPI), for example, was shown to obliterate the insulin-induced decrease in blood glucose concentrations. Sedation may be a solution; however, perturbation of results may preclude useful information. The objectives of the four experiments presented herein were 1) to determine the effects of EPI on insulin response to glucose infusion (IR2G), 2) to assess the effects of the α-adrenergic sedative, detomidine (DET), alone or in combination with the opioid agonist, butorphanol (BUT), on IR2G and glucose response to insulin (GR2I), and 3) to assess the effects of BUT alone …

Retired Female Gymnasts' Reflections On Body Image And Sense Of Self, Briley Casanova

LSU Master's Theses

Researchers identify the early stages of retirement as a key developmental period when many female athletes struggle with both body image disturbances and changes to identity. Body image disturbances and changes to identity may be especially challenging for former female athletes participating in aesthetic focused sports such as gymnastics, because physical appearance plays an important role in elite performance. This study utilized semi-structured, in-depth interviews with five former NCAA Division I artistic gymnasts to learn about their experiences and perceptions of body image and athletic identity in the early stages of retirement. Three main themes emerged from the interviews: (a) …

Iron-Sulfur Cluster Assembly; In Vivo Analysis Of The Methanogenic Suf System, Evan Dunkle

LSU Master's Theses

Iron-sulfur (Fe-S) clusters are among the most ancient and prevalent of all biological cofactors. Their assembly into associated proteins is a tightly regulated process with many organisms employing multiple cluster assembly pathways. Much is known about Fe-S cluster assembly in aerobic organisms such as Escherichia coli (E. coli) but little is known in regards to cluster assembly in more ancient organisms such as methanogens. Methanogens are members of the domain of Archaea and are defined by their ability to generate methane as a byproduct of their main energy generating pathway. Methanogens also have significantly higher Fe-S cluster content …

Evaluation And Enhancement Of Carbon Sequestration Potential Of Existing Vegetation Along Roadsides, Vikram Kapoor, Jeffrey Hutchinson, Samer Dessouky

Data

Corresponding data set for Tran-SET Project No. 18HSTSA01. Abstract of the final report is stated below for reference:

"The objectives of this study were to evaluate the vegetative composition and carbon sequestration potential of vegetation along a major roadway in Texas. Soil and vegetation were evaluated along IH-35 within Bexar County for composition and carbon content. Three 20 m transects were placed at each site and percent vegetative cover was estimated and above ground plant biomass, and soil was collected from three 0.25 m2 subplots along each transect. Plant and soil samples were analyzed for carbon content. Two non-native grasses, …

The Nopp140 Gene In Drosophila Melanogaster Displays Length Polymorphisms In Its Large Repetitive Second Exon, Patrick J. Dimario, Sonu Shrestha Baral

Faculty Publications

Nopp140, often called the nucleolar and Cajal body phosphoprotein (NOLC1), is an evolutionarily conserved chaperone for the transcription and processing of rRNA during ribosome subunit assembly. Metazoan Nopp140 contains an amino terminal LisH dimerization domain and a highly conserved carboxyl domain. A large central domain consists of alternating basic and acidic motifs of low sequence complexity. Orthologous versions of Nopp140 contain variable numbers of repeating basic-acidic units. While vertebrate Nopp140 genes use multiple exons to encode the central domain, the Nopp140 gene in Drosophila uses exclusively exon 2 to encode the central domain. Here, we define three overlapping repeat sequence …

From Pampa To Puna: Biogeography And Diversification Of A Group Of Neotropical Obligate Grassland Birds (Anthus: Motacillidae), Paul Van Els

Faculty Publications

The evolution of Neotropical birds of open landscapes remains largely unstudied. We investigate the diversification and biogeography of a group of Neotropical obligate grassland birds (Anthus: Motacillidae). We use a multilocus phylogeny of 22 taxa of Anthus to test the hypothesis that these birds radiated contemporaneously with the development of grasslands in South America. We employ the R package DDD to analyze the dynamics of Anthus diversification across time in Neotropical grasslands, explicitly testing for shifts in dynamics associated with the Miocene development of grasslands, the putative Pleistocene expansion of arid lowland biomes, and Pleistocene sundering of Andean highland grasslands. …

Evaluation And Enhancement Of Carbon Sequestration Potential Of Existing Vegetation Along Roadsides, Vikram Kapoor, Jeffrey Hutchinson, Samer Dessouky

Publications

The objectives of this study were to evaluate the vegetative composition and carbon sequestration potential of vegetation along a major roadway in Texas. Soil and vegetation were evaluated along IH-35 within Bexar County for composition and carbon content. Three 20 m transects were placed at each site and percent vegetative cover was estimated and above ground plant biomass, and soil was collected from three 0.25 m2 subplots along each transect. Plant and soil samples were analyzed for carbon content. Two non-native grasses, bermudagrass and King Ranch bluestem, were the dominant cover at all sites accounting for > 90% coverage at several …

Determining The Presence Or Absence Of Euscepes Postfasciatus In Haiti And Use Of Molecular Markers For The Distinction Of Cylas Formicarius Elangantulus Biotypes, Marie Rachele Lexidort

LSU Master's Theses

Cylas formicarius elegantulus (Summers) and Euscepes postfaciatus (Fairmaire) are the most destructive sweetpotato weevils in the Caribean Basin. However, damage occurring in sweetpotato production in Haiti is attributed to C. formicarius (S), since it is known to be the most prevalent species while, conflicting information is available pertaining to the occurrence of the E. postfaciatus (F). This study was conducted in the summer of 2018 to determine the presence or absence of E. postfaciatus (F) in Haiti. 98 weevil samples from field (70% ) and infested sweetpotato roots from field and regional markets were collected (30%) in the most relevant …

Electron Transfer Activity Of Mitochondria Neet-Proteins, Yiming Wang

LSU Doctoral Dissertations

Mitochondrial NEET proteins are recently discovered iron-sulfur proteins that are localized within mitochondria. There are three NEET proteins: mitoNEET, a type II diabetes drug pioglitazone binding target, a mitoNEET related protein 1 (Miner1 or NAF-1), and a mitoNEET-related protein 2 (Miner2). While both mitoNEET and Miner1 are mitochondrial outer membrane proteins, Miner2 is a mitochondrial matrix protein. All three NEET proteins bind at least one [2Fe-2S] cluster via CDGSH (Cys-Asp-Gly-Ser-His) motif. In this work, we have investigated the electron transfer activity of mitoNEET, and found that the CDGSH-type [2Fe-2S] clusters of mitoNEET can be reduced by the reduced flavin mononucleotide …

Examining The Evolution Of Urban Multipurpose Facilities: Applying The Ideal-Type To The Facilities Of The National Hockey League And National Basketball Association, Benjamin Downs

LSU Doctoral Dissertations

The standardized versions of ice hockey and basketball emerged during the last quarter of the 19^thcentury. In short order both ice hockey and basketball evolved from amateur, recreational activities to professional sport and entertainment businesses. This study analyzes, contextualizes, and discusses the layout of the urban multipurpose facilities that emerged to house both professional hockey and professional basketball, with particular attention paid to the facilities of the National Hockey League and National Basketball Association. The study uses the lens of modernization and the ideal-type heuristic device to extend Bale’s and Seifried’s facility evolution models. In addition to providing …

Developing Management Strategies For Taproot Decline, Xylaria Sp., In Soybean, Myra Purvis

LSU Master's Theses

Soybean (Glycine max) is one of the most important oilseed crops in the world. Taproot decline is a recently discovered disease caused by Xylaria sp., a novel species located within the Xylaria arbuscula aggregate. Foliar symptoms include interveinal chlorosis and necrosis, and upon further investigation, there are often dead plants adjacent within the row. Many other soybean diseases have similar foliar symptoms; therefore, more examination is usually required for proper identification. Soybean debris from previous years is suspected to be the primary source of inoculum. Plants may be infected at any point during the growing season, often …

Factors Affecting Nest Success Of Colonial Nesting Waterbirds In Southwest Louisiana, Karis A. Ritenour

LSU Master's Theses

As the coastline of Louisiana shifts with global climate change, subsidence, and accelerated sea level rise, important breeding islands for colonial nesting waterbirds are disappearing. In many recent studies flooding has been a leading cause of nest failure for a variety of species, especially those that nest on the ground. I examined the nest success of four species of colonial nesting waterbirds with various nesting strategies on Rabbit Island in southwestern Louisiana during 2017 and2018 by determining nest and fledging success. I monitored 855 nests, including 457 Brown Pelicans nests with an estimated hatch probability of 70%, 270 Forster’s Terns …

Infection Potential Of Rickettsia Felis Via Ingestion, Matthew M. Schexnayder

LSU Master's Theses

Rickettsia felis is the etiologic agent of flea-borne spotted fever (FBSF) in humans and a poorly described cause of fever in animals. It is transmitted by its primary arthropod vector and reservoir host, the cat flea Ctenocephalides felis. Known routes of Rickettsia felis transmission between Rickettsia felis-infected cat fleas and vertebrate hosts include cutaneous bites and contamination of cutaneous wounds with infective flea feces. The bulk of FBSF infections occur in young children in Africa, though infections of people at all ages all over the world have been confirmed. As mammals and young children frequently come into contact …

Development Of Biological Tools To Promote Rice Health And Growth, Ateet Maharjan

LSU Master's Theses

Sheath blight (ShB - caused by Rhizoctonia solani) and bacterial panicle blight (BPB - caused by Burkholderia glumae) are economically important rice diseases in Louisiana and other rice-growing regions. Fungicides and oxolinic acid are used to manage ShB and BPB, respectively, but these chemical methods are not sustainable economically and ecologically. Besides diseases, plant utilizable nitrogen (N) in the soil is inadequate for optimum crop yield, leading to the use of inorganic fertilizers and making agriculture less sustainable. To develop alternative biological control methods for protecting rice plants from diseases, rice-associated bacteria were screened based on their antagonistic …