Life Sciences Commons^™

Genetic Dissection And Qtl Pyramiding To Enhance Salinity Tolerance In Rice (Oryza Sativa L.), Sandeep Chapagain

LSU Doctoral Dissertations

Salinity is emerging as a major threat to rice production worldwide due to climate change and anthropogenic sources. We performed three different population development approaches using exotic salt tolerant donors in US rice backgrounds to identify the salt tolerant QTLs/genes and tolerant breeding lines. First approach involved development of a biparental introgression lines (ILs) population by utilizing a salinity tolerant donor ‘TCCP’ in an elite rice cultivar ‘Cheniere’ background and mapping of QTLs at germination, seedling, and reproductive stages A total of seven QTLs for five germination traits, 16 QTLs for seven seedling stage traits, and 30 QTLs for ten …

Identifying The Components Of A Hemp (Cannabis Sativa L.) (Rosales: Cannabaceae) Integrated Pest Management Program In Louisiana, Nathan C. Arey

LSU Master's Theses

Hemp, Cannabis sativa (L.) (Rosales: Cannabaceae), is defined as a plant in the genus Cannabis with a delta-9 3 tetrahydrocannabinol (THC) concentration of not more than 0.3% on a dry weight basis. Domestic acreage of this crop has increased in response to the ratification of the Agricultural Act of 2014 and the Agricultural Improvement Act of 2018. In 2021, 21,915 hectares of hemp were planted in the United States with a production value of $712 million. There is a current lack of literature on insect related research in this reemerging crop system in the state of Louisiana. Therefore, this present …

Consequences Of Gulf Of Mexico Estuarine Tropical Cyclone Disturbance Regimes For Fish Assemblage Dynamics Conditionally Depend On Life-History Traits And Niche Characteristics, Stephen Edward Potts

LSU Doctoral Dissertations

Tropical cyclones (TC) are intense, localized disturbances that can potentially cause extensive damage to ecosystems. This dissertation is motivated by a need for interdisciplinary study of TC-ecosystem dynamics with applications to ecology, geography, and analytical methodology. I explore concept linkages between TC dynamics and ecosystems to characterize TC-ecosystem relationships as ecological disturbance regimes. This dissertation tests hypotheses and relationships of TC effects on estuarine fish assemblages in the north-western Gulf of Mexico. I explore concepts in TC-ecosystem relationships to link biotic dynamics with physical disturbance.

In Chapter 2, I compared spatial performance of generalized linear models (GLMs) and generalized additive …

Developmental Competence Of Oocytes Derived From Seasonally Anovulatory Mares Treated With Estradiol And Sulpiride, Michelle O. Vetter

LSU Master's Theses

Over the course of two years (2021-2022), two experiments were conducted during the nonbreeding seasons to evaluate the in vitro developmental potential of oocytes derived from seasonally anovulatory mares treated with ECP-sulpiride. The objective of experiments 1 and 2 were to compare pooled recovery and maturation rates of oocytes from mares treated with estradiol cypionate (ECP) and sulpiride with oocytes collected from naturally transitional mares (controls). Cleavage rates of oocytes subjected to intracytoplasmic sperm injection (ICSI) were compared only in experiment 2. In experiments 1 and 2, a total of 36 light horse and pony-cross anovulatory mares were used. Treatment …

Evolution Of Freshwater Fishes In The Northern Neotropics, Diego Elias

LSU Doctoral Dissertations

The northern Neotropics (NN) represents one of the most geologically-complex regions on the planet, composed of island-like geological blocks that have undergone multiple episodes of isolation and connectivity at various geological times. The riverscapes of the NN harbor a unique assemblage of freshwater fishes. In contrast to the freshwaters systems of South America, which are dominated by ostariophysan lineages, the aquatic systems of the NN are dominated by lineages of two families: Cichlidae (cichlids) and Poeciliidae (livebearers). It has been suggested that the geologically complex nature of the region allowed ancestors of cichlids and livebearers to colonize and radiate within …

Aphid Herbivory On Industrial Hemp, Cannabis Sativa L., And The Impact Of Plant-Soil Feedbacks On Hemp Performance In Louisiana, Alex Leede

LSU Master's Theses

Industrial hemp, Cannabis sativa L., is defined as having less than 0.3% delta-9-tetrahydrocannabinol by dry weight. It can be grown for fiber, food, oil, and cannabinoids. As a newly legalized crop, little research exists regarding the cultivation or pest management practices in Louisiana. The versatility of industrial hemp may allow for substantial future production in Louisiana. This project set out to understand the impact of previous crops on hemp performance and soil microbial communities. Soybean, Glycine max L. (Merr), grain sorghum, Sorghum bicolor (L.) Moench, and sweetpotato, Ipomeae batatas (L.) Lam, were selected as soil conditioning crops because they are …

Soil Moisture Mediated Behavioral And Physiological Alterations Of Coptotermes Formosanus And Reticulitermes Flavipes (Blattodea: Rhinotermitidae), Steven J. Richardson

LSU Master's Theses

Substrate moisture is a critical environmental factor for the survival and behavior of subterranean termites (Blattodea: Rhinotermitidae). The invasive Formosan subterranean termite (Coptotermes formosanus) and the native eastern subterranean termite (Reticulitermes flavipes) co-occur in the southeastern United States, but C. formosanus is predominant in subtropical and R. flavipes is more common in temperate regions. The difference in their geographic distributions is largely attributed to their different behavioral and physiological ecology. While ample research has been done on foraging behavior of the two species, there was no empirical evidence for the effects of constant soil moisture on …

Understanding The Horse Fly Species And Species Relations Of The Tabanus Nigrovittatus Complex Along Coastal Louisiana, Darrius M. Davis

LSU Master's Theses

The Dipteran family Tabanidae is among the most diverse families of insects that is comprised of approximately 144 genera with 4455 described species (Pape et al. 2011). Members of the family Tabanidae have been studied for well over 100 years in Louisiana. Hine (1906, 1907) conducted the first surveys of the members of the tabanid family and noted the presence of 14 species. Jones and Bradley (1923) supplemented Hine’s observations with their own inventory of horse flies across four parishes and found an additional 14 species that were not recorded by Hine. Subsequently, Tidwell (1970, 1973) conducted a survey of …

Screening Soybean Cultivars For Resistance To Aerial Blight Caused By Rhizoctonia Solani Ag1-Ia, Kensy D. Rodriguez-Herrera

LSU Master's Theses

Aerial blight, caused by the fungus Rhizoctonia solani AG1-IA, is an economically important soybean disease in the mid-South. The same pathogen also infects other crops commonly rotated with soybeans like rice, corn, and grain sorghum. Rhizoctonia solani AG1-IA is difficult to manage because of its soilborne nature and the production of long-term survival structures, sclerotia. Management has relied on fungicide applications during the season. Still, there is an increasing prevalence of resistance to commonly used strobilurin fungicides and an urgent need to identify soybean cultivars resistant to aerial blight. Since the patchy distribution of the pathogen complicates field cultivar screening, …

Insights Into The Speciation Process From Genomic And Phenotypic Analysis Of An Avian Hybrid Zone In Amazonia, Glaucia Christina Del-Rio

LSU Doctoral Dissertations

Understanding the outcome of secondary contact is essential to shed light on the mechanisms governing species formation and maintenance. In Amazonia, closely related bird taxa with limited dispersal abilities are often separated by rivers, which presumably act as dispersal barriers. However, at the headwaters, rivers cease to be dispersal barriers, and this generates opportunities for secondary contact. In my dissertation, I studied genomic mechanisms associated with phenotypic differences, mitochondrial DNA structure, and putative reproductive barriers between two hybridizing Amazonian bird species in the genus Rhegmatorhina, a group of antbirds that find their arthropod prey exclusively by following army-ant swarms. …

Cover Cropping: Sensor-Based Estimations Of Biomass Yield And Nutrient Uptake And Its Impact On Sugarcane Productivity, Hector H. Fajardo Duran

LSU Master's Theses

Sugarcane in Louisiana can be harvested for up to three years from one planting. Soil cultivation along sides of established beds is done for weed control and improve fertilizer use efficiency which increases the risk of soil degradation and yield decline. Planting cover crops (CC) is a soil conservation practice and an effective strategy to improve soil health and nutrient recycling. Limited work has been done on remote sensor-based evaluation of the potential nutrient benefits from cover crops and its effect on nutrient cycling on sugarcane systems. This study was conducted to evaluate the effect of two planting methods (broadcast …

Analysis Of Geographic Variability Of Fecal Microbiomes Of Fratercula Arctica And Cross-Comparison Of Fecal Microbiomes Of Different Avian Feeding Types, Eric Jose Ramon Martinez

LSU Master's Theses

Gastrointestinal (gut) microbiota have a multitude of effects on their host, from aiding in digestion, to facilitating nutrient uptake, detoxification, and interactions with the immune system. Multiple factors have been identified that influence the composition of vertebrate microbiomes; these include host genetics, environmental conditions, diet and age, sex, and geography. However, broad inferences about wild avian gut microbial diversity and function under natural conditions are limited. Most knowledge on avian microbiomes is derived from studies on domestic poultry. Information on non-model taxa may provide important contextual information about vertebrate host-microbiome interactions and aid in future management of vulnerable species. Here, …

The Importance Of Co2 Recapture In The Co2 Concentrating Mechanism Of Chlamydomonas Reinhardtii, Ashwani Rai

LSU Doctoral Dissertations

The aim of this thesis is to investigate the CO₂ concentrating mechanism (CCM) of Chlamydomonas reinhardtii and to develop a quick method for estimating the activity of carbonic anhydrases (CAs). The first project demonstrates that there are two almost identical mitochondrial CAs in C. reinhardtii, CAH4 and CAH5, that help to maintain photosynthesis and minimize the leak of CO₂ generated by respiration and photorespiration. We used an RNAi approach to reduce the expression of CAH4 and CAH5 so that their physiological functions could be studied. RNAi mutants with low expression of CAH4 and CAH5 have impaired rates …

Breeding Ecology Of Mottled Ducks In Southwestern Louisiana, Elizabeth Sophia Bonczek

LSU Doctoral Dissertations

Mottled ducks are a resident species found in the southern United States that rely on coastal marsh and associated habitat to fulfill the needs of the entirety of their annual cycle. Population monitoring has revealed declines in western Gulf Coast (WGC) mottled ducks since 2008. Mottled duck populations are influenced by survival and recruitment, and changes in these factors may contribute to population declines. The overarching goal of this project was to identify the mechanisms potentially limiting WGC mottled ducks.

I captured adult female mottled ducks during molt on Rockefeller Wildlife Refuge and adjacent lands in southwestern Louisiana from 2017–2019. …

Chloride Channels That Mediate A Transient Nitric Oxide-Dependent Synaptic Polarity Switch In Retinal Amacrine Cells., Tyler Christopher Rodriguez

LSU Doctoral Dissertations

Cytosolic chloride (Cl^-) concentration determines whether GABAergic and glycinergic synapses are inhibitory or excitatory. Ionotropic GABA and glycine receptors passively conduct Cl­^- leading to membrane depolarization or hyperpolarization depending on the Cl^- equilibrium potential. Accordingly, the distribution of Cl^- across the plasma membrane has the potential to determine the properties of networks of retinal amacrine cells (ACs) and their postsynaptic partners. Ion channels are responsible for establishing Cl^- reversal potential. Nitric oxide (NO) is a signaling molecule that can be generated in the inner retina where ACs form synapses. We have shown that NO …

Plastic And Evolved Responses In The Eastern Oyster, Crassostrea Virginica, To Environmental Variation In The Northern Gulf Of Mexico, Kyle Sirovy

LSU Doctoral Dissertations

Climate change and other anthropogenic impacts are causing rapid alterations to many of the world’s most productive coastal ecosystems and there is an urgent need to understand how species will respond to these environmental changes. Organisms may respond through plasticity, evolution, or the evolution of plasticity. In this dissertation, I evaluate the role of plastic and evolved responses in the eastern oyster, Crassostrea virginica, to environmental variation in the northern Gulf of Mexico. I use comparative transcriptomics, physiology, and morphology to examine the relative contribution of plastic and evolved responses for oysters exposed to low salinity and outplant sites …

Louisiana Agriculture Summer, 2022

Louisiana Agriculture

LSU AgCenter researchers constantly search for ways to improve Louisiana agriculture by increasing yields and profitability. They also seek to understand new and less popular crops that could thrive in our region. Professor Yan Chen is helping develop the tea industry along the Gulf Coast, working closely with producers to understand how to grow tea (Camellia sinensis) in the region, and her work is featured in the latest issue of Louisiana Agriculture magazine. The magazine also includes a look into Grow Louisiana and Growing Farmers, two programs designed to help beginning farmers learn the business. Researchers from the …

Geographical Distribution, Allele Frequency, And Inheritance Of Cry1a.105 And Cry2ab2 Resistance In Helicoverpa Zea In The Southeastern Region Of The United States, Wenbo Yu

LSU Doctoral Dissertations

The corn earworm, Helicoverpa zea (Boddie), is a target pest of Bacillus thuringiensis (Bt) maize and cotton in the U.S. Previous studies have reported that this pest has developed field resistance to pyramided Cry1A/Cry2A maize and cotton in certain areas of the southern United States. The objectives of this study were to 1) determine the current status and distribution of the resistance to Cry1A.105 and Cry2Ab2 in H. zea in the southeastern United States; 2) estimate the resistance allele frequencies to the two Bt proteins in H. zea field populations in the region, and 3) assess the inheritance of the …

Producing Bacterial Cellulose From Coffee (Coffea Arabica) Kombucha Fermentation And Assessment Of Its Efficacy To Remove Pathogenic Bacteria From Contaminated Water And A Pollutant Dye From Aqueous Solution, Federico Bueno

LSU Doctoral Dissertations

Bacterial cellulose (BC), composed of cellulosic nanofibrils, is synthesized by a symbiotic culture of bacteria and yeast during the fermentation of coffee kombucha (CK). BC may be used as a purification agent and adsorbent. The overall goal of this project was to synthesize BC from CK fermentation and assess its efficacy in removing pathogenic bacteria from contaminated water and a pollutant dye from aqueous solution. The objectives of this study were to: (1) compare BCs that were produced from different carbohydrate substrates in the fermentation of CK, (2) characterize dried BCs produced using various drying methods, (3) evaluate BC as …

A New Insight Into Fungal Cell Wall Architecture By Functional Genomics And Solid-State Nmr Along With Recent Advancements In Dynamic Nuclear Polarization For Analyzing Biomolecules, Arnab Chakraborty

LSU Master's Theses

This dissertation summarizes the findings related to the way by which supramolecular architecture of fungal cell wall changes with genetic mutation, dispensing genes responsible for biosynthesis of cell wall polysaccharides. This is necessary because without perfect picture of how supramolecular assembly changes with genetic mutation it is hard to assess new anti-fungal targets. Alongside this we have highlighted how recent advancement into Dynamic Nuclear Polarization (DNP) methods improved characterization of biomolecules both in case of labeled and unlabeled samples.

First study utilized Solid-state NMR (SSNMR) which is a non-destructive technique hence enabled us for the first time to deduce how …

Sodium Mediates Developmentally Plastic Responses In Plants And Herbivores, Luis Santiago-Rosario

LSU Doctoral Dissertations

Sodium plays a crucial role in organismal performance, trophic-level interactions, and eco-evolutionary dynamics. For plants, sodium impacts osmoregulation, growth, and water uptake. For animals, sodium is essential influencing osmoregulatory processes, muscle and neural development, and blood regulation. My dissertation aims to disentangle why sodium mismatch affects resource-consumer interactions and its influence on morphological and behavioral plasticity. First, I identified how sodium impacts plant performance and sodium accumulation strategies. I initially focused my research on understanding how increasing substrate sodium affects plant growth and tissue sodium accumulation strategies in controlled settings using a systematic review approach. I found that saltier plants …

Measuring Agricultural Competitiveness: The Case Of U.S. Rice Exports, Estela Barahona

LSU Master's Theses

The United States is known for being one of the world’s largest rice exporters. Rice from the United States is exported to more than 130 nations and territories on all continents. The world rice market accounts for around 50 percent of the U.S. rice yearly sales volume. Even though the U.S. produces less than 2 percent of global rice, exports are significant to its rice industry. Given the various factors that determine trade (e.g., production, distance, income, and trade agreements), theory suggests that the impact of factors on the U.S. agricultural trade will vary according to commodity and country. There …

Evaluating The Effect Of Coated Urea And Urea-Ammonium-Nitrate Solution On Cane Tonnage, Sugar Yield, And Leaf-Soil Nitrogen Content Under Louisiana Sugarcane Production System, Hector J. Mendoza Lagos

LSU Master's Theses

Nitrogen (N) is a crucial nutrient for proper plant growth and development. N deficiency results in poor tillering and thin, short internode stem production for sugarcane production, thus resulting in low cane tonnage. Therefore, proper N fertilizer management is essential for a sustainable sugarcane production system. This research was conducted at the LSU AgCenter Sugar Research Station in St. Gabriel, LA, from 2019 to 2020 at three Sites (Site 1, 2, and 3). The treatments consisted of different N rates (0, 45, 90, and 135 kg N ha^-1) and sources (urea-ammonium-nitrate solution [UAN]-32%, 30-day [Coated Urea 1], 45-day …

Cardiovascular And Range Of Motion Effects After Exercise Training Interventions, Nolynn E. Sutherland

LSU Doctoral Dissertations

The effects of stretching and yoga on the cardiovascular and muscular systems are still being discovered and can be assessed non-invasively. The purpose of this dissertation was to examine the non-invasive markers of stretching and yoga on the metabolic, cardiovascular, and muscular systems. A series of three studies were conducted to gain insight into how stretching and yoga influence the body and if there are any potential differences between them.

The first study aimed to determine if stretching would influence fiber type and motor unit recruitment. An acute bout of stretch exercise was performed immediately before a biking exercise session …

Evaluation Of Triple Negative Breast Cancer Tumor Matrix, Alejandra Ham

Honors Capstones

No abstract provided.

Examining The Relationship Between Health-Related Fitness And Motor Competence In College-Aged Students, Michael Crick

Honors Capstones

No abstract provided.

Exploring The Implementation Of Dike Building And The National Endowment For The Oceans Act To Support Coastal Restoration In Louisiana, Taylor Perrodin

Honors Capstones

No abstract provided.

Development And Characterization Of Physicochemical Properties And Consumer Perception Of Gluten-Free Oat-Based Snack Bars Containing Orange Peel, Andrea R. Muela Negrete

LSU Master's Theses

Orange peel (OP) is a major byproduct from orange juice production, and is a good source of fiber and flavonoids, particularly nobiletin. Nobiletin has been reported to exhibit pharmacological activities including anti-inflammation and antioxidation. Incorporating orange peel into food products would harness economic benefit of this industrial byproduct and support a sustainable food chain. This study was performed to evaluate consumer perception of gluten-free oat-based snack bars (GFOSBs) containing orange peel.

In the first study three GFOSBs were formulated to contain 17%, 20%, and 23% orange peel by weight. Consumers (N=103) evaluated GFOSBs for sensory liking (9-point hedonic scale) and …

Skin Decision: Northern Fowl Mite Infection Alters Diversity Of The Skin Microbiome In European Starling Nestlings Differentially With Age, Kaitlin Couvillion

Honors Capstones

No abstract provided.

Age And Growth Of Blackfin Tuna (Thunnus Atlanticus) In The Gulf Of Mexico, Elsa M. Gutierrez

LSU Master's Theses

Tunas are highly migratory species that are ecologically and economically important components of oceanic ecosystems worldwide. Unfortunately, life history information for the smallest true tuna (genus: Thunnus), blackfin tuna Thunnus atlanticus, is scarce despite the fact that it is the most abundant tuna found throughout much of the western Atlantic. In this study an otolith-based aging approach was used to evaluate age and growth relationships, examine sexual dimorphism in growth, and derive mortality estimates for blackfin tuna in the Gulf of Mexico. Age and growth relationships were evaluated using two models commonly applied to age-at-length data for tunas: the …