Bioresource and Agricultural Engineering Commons^™

2018 Nebraska Groundwater Quality Monitoring Report

Nebraska Department of Environmental Quality: Reports

The 2001 Nebraska Legislature passed LB329 (Neb. Rev. Stat. §46-1304) which, in part, directed the Nebraska Department of Environmental Quality (NDEQ) to report on groundwater quality monitoring in Nebraska. Reports have been issued annually since December 2001. The text of the statute applicable to this report follows: “The Department of Environmental Quality shall prepare a report outlining the extent of ground water quality monitoring conducted by natural resources districts during the preceding calendar year. The department shall analyze the data collected for the purpose of determining whether or not ground water quality is degrading or improving and shall present the …

Effects Of Subsurface Drainage Systems On Water And Nitrogen Footprints Simulated With Rzwqm2, Kristina J. Craft, Matthew J. Helmers, Robert W. Malone, Carl H. Pederson, Linda R. Schott

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Developing drainage water management (DWM) systems in the Midwest to reduce nitrogen (N) transport to the northern Gulf of Mexico hypoxic zone requires understanding of the long-term performance of these systems. Few studies have evaluated long-term impacts of DWM, and the simulation of controlled drainage (CD) with the Root Zone Water Quality Model (RZWQM) is limited, while shallow drainage (SD) has not been examined. We tested RZWQM using nine years (2007-2015) of field data from southeast Iowa for CD, SD, conventional drainage (DD), and undrained (ND) systems and simulated the long-term (1971-2015) impacts. RZWQM accurately simulated N loss in subsurface …

A Tunable, Three-Dimensional In Vitro Culture Model Of Growth Plate Cartilage Using Alginate Hydrogel Scaffolds, Alek G. Erickson, Taylor D. Laughlin, Sarah M. Romereim, Catherine N. Sargus-Patino, Angela K. Pannier, Andrew T. Dudley

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Defining the final size and geometry of engineered tissues through precise control of the scalar and vector components of tissue growth is a necessary benchmark for regenerative medicine, but it has proved to be a significant challenge for tissue engineers. The growth plate cartilage that promotes elongation of the long bones is a good model system for studying morphogenetic mechanisms because cartilage is composed of a single cell type, the chondrocyte; chondrocytes are readily maintained in culture; and growth trajectory is predominately in a single vector. In this cartilage, growth is generated via a differentiation program that is spatially and …

Application Of A Multi-Hybrid Planter For Geospatial Assessment Of Zone-Based Corn Hybrid And Soybean Seed Treatment Performance For Optimized Crop Production, Rachel Stevens

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

The ability to variably plant multiple hybrids or treatments during field operation has been identified as one option for mitigating in-field variation caused by soil, disease pressures, environmental and water conditions. While the system performance has been validated, producers still have questions concerning development of management zones, hybrid and treatment assignment, and economic advantage from implementation. Assessment of a multi-hybrid planting platform was conducted during the 2016 and 2017 growing seasons. On-farm trials were performed on ten corn fields and five soybean fields in eastern Nebraska. Corn trials focused on placement of two contrasting hybrids for soil type and water …

Irrigation Pumps - Preserving Performance, Derrel L. Martin

Department of Agricultural and Biological Systems Engineering: Presentations and White Papers

This paper describes how pumps must be matched to operating conditions and power units to provide the desired performance and efficiency. We have recently seen installations where one or more components are not properly matched causing higher than necessary pumping costs. Inspection and maintenance of systems and measurement of flow and pressure will go a long way toward monitoring if the proper conditions are being met. This paper also covers types of pumps, pump components, pump curves, impeller speed and trim, pump staging, affinity laws, pump drives, power units, cavitation, and net positive suction head.

Detection Of Multi-Tomato Leaf Diseases (Late Blight, Target And Bacterial Spots) In Different Stages By Using A Spectral-Based Sensor, Jinzhu Lu, Reza Ehsani, Yeyin Shi, Ana Isabel De Castro, Shuang Wang

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Several diseases have threatened tomato production in Florida, resulting in large losses, especially in fresh markets. In this study, a high-resolution portable spectral sensor was used to investigate the feasibility of detecting multi-diseased tomato leaves in different stages, including early or asymptomatic stages. One healthy leaf and three diseased tomato leaves (late blight, target and bacterial spots) were defined into four stages (healthy, asymptomatic, early stage and late stage) and collected from a field. Fifty-seven spectral vegetation indices (SVIs) were calculated in accordance with methods published in previous studies and established in this study. Principal component analysis was …

Integration Of Hydrogeophysical Datasets And Empirical Orthogonal Functions For Improved Irrigation Water Management, Catherine E. Finkenbiner, Trenton E. Franz, Justin P. Gibson, Derek M. Heeren, J. D. Luck

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Precision agriculture offers the technologies to manage for infield variability and incorporate variability into irrigation management decisions. The major limitation of this technology often lies in the reconciliation of disparate data sources and the generation of irrigation prescription maps. Here the authors explore the utility of the cosmic-ray neutron probe (CRNP) which measures volumetric soil water content (SWC) in the top ~ 30 cm of the soil profile. The key advantages of CRNP is that the sensor is passive, non-invasive, mobile and soil temperature-invariant, making data collection more compatible with existing farm operations and extending the mapping period. The objectives …

Prediction Of Agricultural Implement Hydraulic Power Requirements Using Controller Area Network Bus Data, Gabriel P. Stoll, Rodney A. Rohrer, Santosh K. Pitla, Joe D. Luck

Department of Agricultural and Biological Systems Engineering: Faculty Publications

One of the important challenges in agricultural machinery research is the ability to effectively determine power requirements of a given field operation. The Controller Area Network (CAN) Bus, also known as ISOBUS, has proven to be an effective digital tool for tractor and implement data collection. This study attempted to determine implement hydraulic power requirements using a combination of existing public tractor CAN messages and minimal added sensors. The sensor signals were published on the CAN bus for ease of simultaneous sensor signal and CAN message data collection. Based upon the available CAN messages, this study attempted to measure hydraulic …

Effects Of Alternate Wetting And Drying Irrigation Regime And Nitrogen Fertilizer On Yield And Nitrogen Use Efficiency Of Irrigated Rice In The Sahel, Koffi Djaman, Valere C. Mel, Lamine Diop, Abdoulaye Sow, Raafat El-Namaky, Baboucarr Manneh, Kazuki Saito, Koichi Futakuchi, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The objectives of this study were to investigate water saving strategies in the paddy field and to evaluate the performance of some of the newly released rice varieties. Field experiments were conducted at Fanaye in the Senegal River Valley during two rice growing seasons in 2015. Three irrigation regimes ((i) continuous flooding, (ii) trigging irrigation at soil matric potential (SMP) of 30 kPa, (iii) trigging irrigation at SMP of 60 kPa) were tested in an irrigated lowland rice field. Irrigation regimes (ii) and (iii) are alternate wetting and drying (AWD) cycles. Four inbred rice varieties (NERICA S-21, NERICA S-44, Sahel …

Hydrologic Evaluation Of Residential Rain Gardens Using A Stormwater Runoff Simulator, A. R. Anderson, T. G. Franti, D. P. Shelton

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Engineered bioretention cells with underdrains have shown water quality and hydrologic benefits for abating urban stormwater problems. Less is known about the hydrologic performance of residential rain gardens that rely on in situ soil infiltration as the primary mechanism of volume control. Eleven residential rain gardens in Lincoln, Nebraska, were evaluated using a variable-rate stormwater runoff simulator. A volume-based water quality volume (WQV) design storm of 3.0 cm was applied to each rain garden as an SCS Type II runoff hydrograph until the system began overflowing to test the rain gardens for surface and subsurface storage capacity, drawdown rate, ponding …

Registration For Optical Multimodal Remote Sensing Images Based On Fast Detection,Window Selection, And Histogram Specification, Xiaoyang Zhao, Jian Zhang, Chenghai Yang, Huaibo Song, Yeyin Shi, Xingen Zhou, Dongyan Zhang, Guozhong Zhang

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In recent years, digital frame cameras have been increasingly used for remote sensing applications. However, it is always a challenge to align or register images captured with different cameras or different imaging sensor units. In this research, a novel registration method was proposed. Coarse registration was first applied to approximately align the sensed and reference images. Window selection was then used to reduce the search space and a histogram specification was applied to optimize the grayscale similarity between the images. After comparisons with other commonly-used detectors, the fast corner detector, FAST (Features from Accelerated Segment Test), was selected to extract …

Impact Of Eastern Redcedar Proliferation On Water Resources In The Great Plains Usa—Current State Of Knowledge, Chris B. Zou, Dirac Twidwell, Christine H. Bielski, Dillon T. Fogarty, Aaron R. Mittelstet, Patrick J. Starks, Rodney E. Will, Yu Zhong, Bharat Sharma Acharya

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In the Great Plains of the central United States, water resources for human and aquatic life rely primarily on surface runoff and local recharge from rangelands that are under rapid transformation to woodland by the encroachment of Eastern redcedar (redcedar; Juniperus virginiana) trees. In this synthesis, the current understanding and impact of redcedar encroachment on the water budget and water resources available for non-ecosystem use are reviewed. Existing studies concluded that the conversion from herbaceous-dominated rangeland to redcedar woodland increases precipitation loss to canopy interception and vegetation transpiration. The decrease of soil moisture, particularly for the subsurface soil layer, …

Investigation Of Organic Solvents’ Effects On Kenaf (Hibiscus Cannabinus L.) Biomass Conversion In Subcritical Water, Bahar Meryemoglu, Arif Hasanoglu, Mehtap Kurtulus, Sibel Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Kenaf biomass was hydrolyzed under subcritical water conditions in the presence of various organic solvents. The solvents tested were tetrahydrofuran (THF), acetone, xylene (mixed isomers) and methanol. The organic compounds released into hydrolysates, total organic contents, water-soluble total phenols, and the molecular weight distributions of the polysaccharides in the hydrolysates, solid residues leftover after hydrolysis and gaseous products formed during the solubilization process were determined. The results showed that organic solvents significantly enhanced the dissolution of kenaf biomass (methanol < (omp)xylene ≤ acetone ~ tetrahydrofuran). The hydrolysis percentage was found to be between 75-82% depending on the type of the solvent. Hydrolysis yield and total organic carbons released into hydrolysates highly differed when the solubilization process was performed under carbon dioxide pressure and this effect considerably varied based on the type of solvent used in hydrolysis process. The main gas product formed during hydrolysis process was carbon dioxide with ~80% composition. Morphological measurements of the solid biomass residues left after hydrolysis showed substantial degradations with increasing number of pores on the biomass surfaces.

Near Infrared Fluorescent Single Walled Carbon Nanotubes As Tissue Localizable Biosensors, Nicole M. Iverson, Michael S. Strano, Nigel F. Strano, Thomas P. Mcnicholas

Department of Agricultural and Biological Systems Engineering: Faculty Publications

A nanosensor for detecting an analyte can include a sub strate, a photoluminescent nanostructure, and a polymer interacting with the photoluminescent nanostructure. The nanosensor can be used in in vivo for biomedical applications.

Impact Of Vegetative Treatment Systems On Multiple Measures Of Antibiotic Resistance In Agricultural Wastewater, Lisa M. Durso, Daniel N. Miller, Christopher G. Henry

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Wastewater is an important vector of antibiotic resistant bacteria and antibiotic resistance genes (ARB/G). While there is broad agreement that ARB/G from agricultural (ag) wastewaters can be transported through the environment and may contribute to untreatable infectious disease in humans and animals, there remain large knowledge gaps surrounding applied details on the types and amounts of ARB/G associated with different agricultural wastewater treatment options and different ag production systems. This study evaluates a vegetative treatment system (VTS) built to treat the wastewater from a beef cattle feedlot. Samples were collected for three years, and plated on multiple media types to …

Special Issue: Microbial Community Modeling: Prediction Of Microbial Interactions And Community Dynamics, Hyun-Seob Song

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Microbial communities are networks of species, the interaction structure of which dynamically reorganizes in a varying environment. Even in a static condition, community dynamics are often difficult to predict due to highly nonlinear interspecies interactions. Understanding the fundamental principles of microbial interactions is therefore key for predicting and harnessing community function and properties. As extensively reviewed previously, mathematical models and computational methods that can predictively link interactions to community behaviors are indispensable tools for achieving this goal [1].

Field-Based Scoring Of Soybean Iron Deficiency Chlorosis Using Rgb Imaging And Statistical Learning, Geng Bai, Shawn Jenkins, Wenan Yuan, George L. Graef, Yufeng Ge

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Iron deficiency chlorosis (IDC) is an abiotic stress in soybean that can cause significant biomass and yield reduction. IDC is characterized by stunted growth and yellowing and interveinal chlorosis of early trifoliate leaves. Scoring IDC severity in the field is conventionally done by visual assessment. The goal of this study was to investigate the usefulness of Red Green Blue (RGB) images of soybean plots captured under the field condition for IDC scoring. A total of 64 soybean lines with four replicates were planted in 6 fields over 2 years. Visual scoring (referred to as Field Score, or FS) was conducted …

Internet Of Underground Things In Precision Agriculture: Architecture And Technology Aspects, Mehmet C. Vuran, Abdul Salam, Rigoberto Wong, Suat Irmak

School of Computing: Faculty Publications

The projected increases in World population and need for food have recently motivated adoption of information technology solutions in crop fields within precision agriculture approaches. Internet Of Underground Things (IOUT), which consists of sensors and communication devices, partly or completely buried underground for real-time soil sensing and monitoring, emerge from this need. This new paradigm facilitates seamless integration of underground sensors, machinery, and irrigation systems with the complex social network of growers, agronomists, crop consultants, and advisors. In this paper, state-of-the-art communication architectures are reviewed, and underlying sensing technology and communication mechanisms for IOUT are presented. Moreover, recent advances in …

Three-Dimensional Modeling Of Nitrate-N Transport In Vadose Zone: Roles Of Soil Heterogeneity And Groundwater Flux, Simin Akbariyeh, Shannon L. Bartelt-Hunt, Daniel D. Snow, Xu Li, Zhenghong Tang, Yusong Li

Department of Civil and Environmental Engineering: Faculty Publications

Contamination of groundwater from nitrogen fertilizers in agricultural lands is an important environmental and water quality management issue. It is well recognized that in agriculturally intensive areas, fertilizers and pesticides may leach through the vadose zone and eventually reach groundwater. While numerical models are commonly used to simulate fate and transport of agricultural contaminants, few models have considered a controlled field work to investigate the influence of soil heterogeneity and groundwater flow on nitrate-N distribution in both root zone and deep vadose zone.

In this work, a numerical model was developed to simulate nitrate-N transport and transformation beneath a center …

High Throughput Phenotyping Of Sorghum For The Study Of Growth Rate, Water Use Efficiency, And Chemical Composition, Piyush Pandey

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Plant phenotyping using digital images has increased the throughput of the trait measurement process, and it is considered to be a potential solution to the problem of the phenotyping bottleneck. In this study, RGB images were used to study relative growth rate (RGR) and water use efficiency (WUE) of a diverse panel of 300 sorghum plants of 30 genotypes, and hyperspectral images were used for chemical analysis of macronutrients and cell wall composition. Half of the plants from each genotype were subjected to drought stress, while the other half were left unstressed. Quadratic models were used to estimate the shoot …

Thermodynamic Limitations To Agricultural Productivity And Food Security: Livestock In Sub-Saharan Africa, Calvin Harman

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

By 2050, to feed a nearly tripling and more urbanized population in sub-Saharan Africa (SSA) will require significant increases in crop productivity throughout the region’s agricultural systems, if a greater reliance on imports is to be avoided. Increases in crop yields to maximum potential productivity (closure of crop yield gaps) can produce more calories and protein, but may be insufficient to sustain the burgeoning human population according to recent analysis (van Ittersum et al., 2016). In this thesis, alternative management options (i.e. crop allocation and crop substitutions) are found to increase total energy productivity and the thermodynamic efficiency of food …

Cultivation Of Chlorella Sorokiniana Using Beef Feedlot Runoff Holding Pond Effluent, Mitchell Klaus Goedeken

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

A study was conducted to test the suitability of utilizing beef feedlot runoff holding pond effluent for cultivating algae. The algae strain used, Chlorella sorokiniana, was previously identified as a potential energy feedstock for cattle. The previous research was initiated in pursuit of a goal to develop a cycle of utilizing nutrients from beef manure to cultivate algae and then utilizing dewatered algae as a feed supplement for beef cattle.

Runoff holding pond effluent samples were collected from commercial beef production operations in Nebraska during spring 2016. Equal portions of samples from each cooperating farm were composited and then aliquoted …

Use Of Long Term Weather Data And Spatially Delineated Field Attributes To Predict Water And Energy Conservation From Variable Rate Irrigation, Sahil Sharma

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

The declining levels of the Ogallala aquifer calls for more judicious use of water. Studies have shown that VRI has the potential for water savings. But adoption of VRI is still very low. The major reason is lack of information on the returns from the VRI systems and its feasibility in different fields. Also, a quantification of the required reduction in prices of VRI is necessary. So, an economic return analysis of VRI strategies was done to compare it to uniform irrigation management (UIM) using a water balance model based on long term weather data and field properties for a …

Design And Development Of An Electronic Granular Urea Applicator As An Attachment With Rice Transplanter, Md Towfiqur Rahman

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

In rice production system, transplanting and fertilizer application are tedious, time consuming and laborious task, and mostly done manually in Bangladesh. Mechanical planting of rice and granular urea placement have distinctive advantages over manual operation. Mechanical planting of rice becoming popular in the country in recent years and few machines have been developed for guti-urea deep placement, however having some limitations. Considering precise guti-urea placement along with rice transplanting, an attempt was under taken to design and fabricate an electronic control guti-urea applicator to be attach with a 4-row walk behind type rice transplanter. Fabrication of the electronic guti-urea applicator …

Performance Assessment Of Electromagnetic Soil Water Sensors In Different Soil Textural, Temperature, And Salinity Conditions, Jasreman Singh

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Determination of accurate and continuous measurements of volumetric water content (θ_v) is extremely valuable for irrigation management and other agronomic decisions. Lately, electromagnetic (EM) sensors are being widely used to monitor θ_v continuously which also offer the benefits of ease of installation, fewer regulatory and safety concerns, and cost effectiveness. However, the accuracy of parameters [soil temperature, electrical conductivity (EC_a), dielectric permittivity (ε_ra), and θ_v] reported by EM sensors need to be evaluated for them to be utilized for agricultural water management. In the current study, the accuracy of a wide …

Setback Distance Requirements For Removal Of Swine Slurry Constituents In Runoff, John E. Gilley, Shannon L. Bartelt-Hunt, Kent M. Eskridge, Xu Li, Amy M. Schmidt, Daniel D. Snow

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The use of setback distances for manure application on cropland areas adjacent to surface water bodies could serve a function similar to vegetative filter strips. However, little information currently exists to identify the setback distances necessary to effectively reduce the transport of contaminants in runoff. The objective of this study was to determine the effects of setback distance and runoff rate on concentrations of selected constituents in runoff following land application of swine slurry to a no-till cropland area in southeast Nebraska. The study site had a residue cover of 7.73 Mg ha-1 and a slope gradient of 4.9%. The …

Quantifying Effectiveness Of Streambank Stabilization Practices On Cedar River, Nebraska, Naisargi Dave, Aaron R. Mittelstet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Excessive sediment is a major pollutant to surface waters worldwide. In some watersheds, streambanks are a significant source of this sediment, leading to the expenditure of billions of dollars in stabilization projects. Although costly streambank stabilization projects have been implemented worldwide, long-term monitoring to quantify their success is lacking. There is a critical need to document the long-term success of streambank restoration projects. The objectives of this research were to (1) quantify streambank retreat before and after the stabilization of 18 streambanks on the Cedar River in North Central Nebraska, USA; (2) assess the impact of a large flood event; …

Techno-Economic Implications Of Fed-Batch Enzymatic Hydrolysis, Ellen Emanuel

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

As ethanol production continues to increase in the United States, cellulosic ethanol continues to gain traction as a viable option for meeting ethanol demands. In this work, a literature review of techno-economic analyses for cellulosic ethanol was conducted. It was found that pretreatment methods greatly affect the ethanol production costs. There is a lack of techno-economic data comparing a batch enzymatic hydrolysis to a fed-batch enzymatic hydrolysis for a separate hydrolysis and fermentation production process. Consequently, a techno-economic analysis comparing cellulosic ethanol production using batch versus fed-batch enzymatic hydrolysis was conducted. SuperPro Designer software (Intelligen, Scotch Plains, New Jersey), a …

Development Of Cardiac Atrial Kick Shear Wave Elastography To Assess Myocardial Stiffness, Aaron J. Engel

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Increased myocardial stiffness, which is characteristic of many cardiovascular diseases, leads to a loss of diastolic function and is a cause of diastolic heart failure. Current methods to estimate myocardial stiffness rely on pressure-volume relationships derived from invasive cardiac catheter measurements. Noninvasive methods to estimate myocardial stiffness include ultrasound-based and magnetic resonance-based shear wave elastography, where the stiffness of the tissue is related to the propagation speed of a shear wave. Currently, ultrasound-based cardiac shear wave elastography includes acoustic radiation force based methods; however, the in vivo generation and detection of the shear waves in myocardium is significantly degraded due …

Spatial And Temporal Variation In Precipitation In Togo, Koffi Djaman, Vivek Sharma, Daran Rudnick, Komlan Koudahe, Suat Irkmak, Kokou Adambounou Amouzou, Jean Mianikpo Sogbedji

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Precipitation is one of the important variables in hydrological cycle and has important application in both irrigated and rainfed agricultural crop production. Better understanding of spatio-temporal variability of precipitation across Togo is important and useful for water users and most agricultural activities. Thus, the objective this study was to analyze the spatial and temporal variation in monthly and annual precipitation across Togo for the period of 1961-2001. Monthly precipitation data was provided by the national direction of meteorology. The performed analysis revealed a decline in annual total precipitation across almost all agro-ecological zones in Togo with the Maritime Region revealed …