Bioresource and Agricultural Engineering Commons^™

Invasion Of The P Elements: Tolerance Is Not Futile, Colin D. Meiklejohn, Justin P. Blumenstiel

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Organisms are locked in an eternal struggle with parasitic DNA sequences that live inside their genomes and wreak havoc on their host’s chromosomes as they spread through populations. To combat these parasites, host species have evolved elaborate mechanisms of resistance that suppress their activity. A new study in Drosophila indicates that, prior to the acquisition of resistance, individuals can vary in their ability to tolerate the activity of these genomic parasites, ignoring or repairing the damage they induce. This tolerance results from variation at genes involved in germline development and DNA damage checkpoints and suggests that these highly conserved cellular …

Assessing The Relationship Between Groundwater Nitrate Concentrations And Environmental Variables Through Repeat Sampling And Statistical Machine Learning: Dutch Flats, Nebraska, Martin Wells

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Nitrate-contaminated aquifers are common in landscapes dominated by agricultural land use. Health concerns related to consuming nitrate-contaminated groundwater are well documented and continued research aimed at decreasing concentrations is critical. A 1990s U.S. Geological Survey (USGS) study focused on groundwater characteristics in the Dutch Flats area of western Nebraska. Agricultural-related practices were determined to largely influence groundwater recharge and nitrate concentrations ([NO₃^-]). Since the conclusion of the USGS study, a transition to more efficient irrigation technology has been observed in this region. The emphasis of this 2016 study was to resample several well nests examined in 1998 …

Cover Crops Have Negligible Impact On Soil Water In Nebraska Maize–Soybean Rotation, J. Burdette Barker, Derek M. Heeren, Katja Koehler-Cole, Charles Shapiro, Humberto Blanco-Canqui, Roger W. Elmore, Christopher A. Proctor, Suat Irmak, Charles A. Francis, Tim M. Shaver, Ali T. Mohammed

Department of Agricultural and Biological Systems Engineering: Faculty Publications

One perceived cost of integrating winter cover cropping in maize (Zea mays L.) and soybean [Glycine max (L.) Merr.] rotation systems is the potential negative impact on soil water storage available for primary crop production. The objective of this 3-year study was to evaluate the effects of winter cover crops on soil water storage and cover crop biomass production following no-till maize and soybean rotations. Locations were near Brule (west-central), Clay Center (south-central), Concord (northeast), and Mead (east-central), Nebraska, United States. Treatments included crop residue only (no cover crop) and a multi-species cover crop mix, both broadcast-seeded before …

Plant Community Composition, Floristic Quality, And Establishment Of Roadside Revegetation In Nebraska, Usa, Jonathan M. Soper

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Roadside revegetation poses a challenge and opportunity for biodiversity conservation, as the land area occupied by roadsides is not expected to decline in the future. In the context of roadside revegetation activities in rural regions dominated by agricultural land uses, revegetation efforts can establish plant communities that offer unique species that would otherwise be absent on the landscape. To determine the efficacy of roadside revegetation efforts in 1) providing plant communities of high biodiversity value and 2) meeting the expectations of roadside revegetation managers for establishment, we quantified botanical composition, floristic quality, and success in seeding efforts to meet manager …

Comparison Of Nitrogen Fertigation Management Strategies For Center-Pivot Irrigated Maize In The Sub-Humid Area Of China, Jingjing Li, Wenjing Zang, Yaojun Li, Derek M. Heeren, Haijun Yan

Department of Agricultural and Biological Systems Engineering: Faculty Publications

In the sub-humid region of Northeast China, increasing use of center-pivot irrigation systems has caused increased interest in sprinkler fertigation technology in maize production to improve nitrogen (N) use efficiency and protect the environment. However, the lack of fertigation strategies for maize cultivation restrains the adoption of sprinkler fertigation technology. A field experiment was carried out in a sub-humid region of Northeast China on maize to determine the effect of different fertigation management strategies on plant growth, grain yield and nitrate content in the soil during the maize growing season. Three N rates (200, 160, and 120 kg N ha …

An Evaluation Of Unmanned Aerial System Multispectral And Thermal Infrared Data As Information For Agricultural Crop And Irrigation Management, Mitch Maguire

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Spatial irrigation management has been steadily advancing over the last several years. A current issue with managing irrigation spatially on sub-field scale is the inability to readily collect the spatial field data necessary to properly manage irrigation. Multispectral and thermal infrared imagery used in informing irrigation management decisions was previously collected by satellite and manned aircraft remote sensing platforms. These remote sensing platforms pose issues concerning economic feasibility, revisit intervals, and weather factors that inhibit the collection of data. Recent developments in unmanned aerial systems, which provide an additional means of collecting multispectral and thermal infrared data, have the potential …

Tradeoffs In Model Performance And Effort For Long-Term Phosphorus Leaching Based On In Situ Field Data, Ryan P. Freiberger, Derek M. Heeren, Dean E. Eisenhauer, Aaron R. Mittelstet, Guillermo Baigorria

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Phosphorus and N are critical nutrients for agriculture but are also responsible for surface water enrichment that leads to toxic algal growth. Although P loading to surface waters has traditionally been thought to occur primarily in surface runoff, contributions from subsurface transport can also be significant. The primary objectives of this research were to evaluate several methods of representing macropore flow and transport in a finite element model using plot-scale infiltration and leaching data and to compare several models of various levels of complexity to simulate long-term P leaching. To determine flow and transport parameters, single- and dual-porosity models in …

Portable Flux Tower Deployments Field Campaign Report, M. S. Torn, L Kuepper, S. C. Biraud, D. P. Billesbach

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Contents

Acronyms and Abbreviations...................................................................... iii

1.0 Summary ....................................................... 1

2.0 Results ........................................... 1

3.0 Publications and References ................................................. 2

4.0 Lessons Learned .................................................................... 2

Developing An Integrated Model For The Corn, Ethanol, And Beef Systems Using A Loosely Coupled Web Framework, Ryan Anderson

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

With the global population approaching 9 billion people by the year 2050, the world’s food, energy, and water (FEW) resources must be used more intelligently to provide for everyone. While we understand how individual FEW systems behave using modeling, we cannot understand the full environmental and production impacts of decisions in each system without understanding how they are all linked together. An approach to coupling these systems is starting with identifying a few highly interconnected FEW systems. The corn, ethanol, and beef systems are large economic and agricultural drivers in the Midwest United States and are highly linked. Many individual …

U.S. Agro-Climate In 20th Century: Growing Degree Days, First And Last Frost, Growing Season Length, And Impacts On Crop Yields, Meetpal Singh Kukal, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Significant air temperature changes have occurred globally during the 20th century, which are spatially variable to a considerable degree and these changes can have substantial implications in agroecosystem productivity. The agroclimate indicators that are responsible in these contexts are first fall frost (FFF), last spring frost (LSF), climatological growing season (CGS) length, and heat accumulation (growing degree days, GDD). We explore spatial and temporal trends associated with these indices across the continental U.S. (CONUS) during 1900–2014 using datasets collected at 1218 sites. On average, FFF has been occurring later (by 5.4 days century⁻¹), and LSF has been occurring …

Nitrogen And Weed Management In Transplanted Tomato In The Nigerian Forest-Savanna Transition Zone, J. A. Adigun, O. S. Daramola, O. R. Adeyemi, P. M. Olorunmaiye, O. A. Osipitan

Haskell Agricultural Laboratory (Northeast Research and Extension Center)

Weed infestation and inherent low soil fertility are among primary reasons for low yields of tomato in Nigeria. Field trials were carried out during the wet season of 2015 and 2016 to evaluate yield response of tomato to nitrogen (N) application and weed control methods in the forest-savanna transition zone of Abeokuta, Nigeria. Positive relationship exists between growth of weed species and increase in N application. Across the years of study, increase in N up to 90 kg/ha increased weed density by 11–25%, however, the increased N gave the transplanted tomato competitive advantage and thus enhanced weed smothering. Pre-transplant application …

Adam J. Liska: Curriculum Vitae, Adam Liska

Adam Liska Papers

Associate Professor, George Dempster Smith Chair of Industrial Ecology, Departments of Biological Systems Engineering and Agronomy & Horticulture, University of Nebraska-Lincoln 236 L.W. Chase Hall, Lincoln, NE 68583-0726, Ph: (402) 472-8744, e-mail: [email protected]

Ph.D. 2003 Biology (magna cum laude), Max Planck Institute of Molecular Cell Biology & Genetics, Technische Universität Dresden, Dresden, Germany

Dynamic Classification Of Moisture Stress Using Canopy And Leaf Temperature Responses To A Step Changes Of Incident Radiation, Erin E. Stevens, George E. Meyer, Ellen T. Paparozzi

Honors Program: Senior Projects (Public)

Environmental conditions affect plant productivity and understanding how plants respond to drought stress can be measured in different ways. This study focused on measuring leaf response time to induced water stress. Leaf response time to a step increase and step decrease in radiation was computed for four species of well-watered and water-stressed plants in a controlled environment. The canopy temperature was measured with an infrared thermometer and a thermal imaging camera. Thermal images were analyzed to determine the average temperature of a selected single, unobstructed leaf at the top of the canopy. Both the canopy response time and the single …

Evaluation Of A Hybrid Reflectance-Based Crop Coefficient And Energy Balance Evapotranspiration Model For Irrigation Management, J. Burdette Barker, Christopher M. U. Neale, Derek M. Heeren, Andrew E. Suyker

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Accurate generation of spatial soil water maps is useful for many types of irrigation management. A hybrid remote sensing evapotranspiration (ET) model combining reflectance-based basal crop coefficients (K_cbrf) and a two-source energy balance (TSEB) model was modified and validated for use in real-time irrigation management. We modeled spatial ET for maize and soybean fields in eastern Nebraska for the 2011-2013 growing seasons. We used Landsat 5, 7, and 8 imagery as remote sensing inputs. In the TSEB, we used the Priestly-Taylor (PT) approximation for canopy latent heat flux, as in the original model formulations. We also used the …

Development Of A Sprayer Performance Diagnostic Tool Using Improved Mapping And Error Quantification Practices, Aaron Shearer

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

While sprayer technologies have advanced greatly over the past decade and a half, chemical application errors are still prominent in many in-field operations. Over-application of pesticides can cause harm to the crop, reducing yield, and result in added pollution to the environment. Under-application of pesticides fails to control pests within the field, again lowering crop yields, and causing profit loss for the producer. Current operator feedback from in-field pesticide application operations conveys limited information and often times does not allow the operator to visualize a true representation of their performance. Farm Management Information Systems (FMIS) typically do not account for …

Climate-Driven Crop Yield And Yield Variability And Climate Change Impacts On The U.S. Great Plains Agricultural Production, Meetpal Singh Kukal, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Climate variability and trends affect global crop yields and are characterized as highly dependent on location, crop type, and irrigation. U.S. Great Plains, due to its significance in national food production, evident climate variability, and extensive irrigation is an ideal region of investigation for climate impacts on food production. This paper evaluates climate impacts on maize, sorghum, and soybean yields and effect of irrigation for individual counties in this region by employing extensive crop yield and climate datasets from 1968–2013. Variability in crop yields was a quarter of the regional average yields, with a quarter of this variability explained by …

Evaluation Of Variable Rate Irrigation Using A Remote-Sensing-Based Model, John Burdette Barker, Derek M. Heeren, Christopher M.U. Neale, Daran Rudnick

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Improvements in soil water balance modeling can be beneficial for optimizing irrigation management to account for spatial variability in soil properties and evapotranspiration (ET). A remote-sensing-based ET and water balance model was tested for irrigation management in an experiment at two University of Nebraska-Lincoln research sites located near Mead and Brule, Nebraska. Both fields included a center pivot equipped with variable rate irrigation (VRI). The study included maize in 2015 and 2016 and soybean in 2016 at Mead, and maize in 2016 at Brule, for a total of 210 plot-years. Four irrigation treatments were applied at Mead, including: VRI based …

Dynamic Rops Test For Tractors Over 6,000 Kilograms, Caleb M. Lindhorst, Roger M. Hoy, Santosh Pitla, Michael F. Kocher

Department of Agricultural and Biological Systems Engineering: Faculty Publications

OECD static tests (Codes 4, 6, 7, and 8) for agricultural rollover protective structures (ROPS) have become accepted standards for evaluating the ability of these structures to protect the operator during tractor rollover events. The strength properties of some materials typically used in ROPS change because of cold weather embrittlement at low temperatures. The static ROPS tests lack the ability to evaluate the strength of these structures during cold weather. The use of the dynamic ROPS test is well noted as a means for proving cold weather embrittlement resistance properties. Unfortunately, application of the OECD dynamic ROPS test (Code 3) …

The Open Source Gaitor Suite For Rodent Gait Analysis, Brittany Y. Jacobs, Emily H. Lakes, Alex J. Reiter, Spencer P. Lake, Trevor R. Ham, Nic D. Leipzig, Stacy L. Porvasnik, Christine E. Schmidt, Rebecca A. Wachs, Kyle D. Allen

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Locomotive changes are often associated with disease or injury, and these changes can be quantified through gait analysis. Gait analysis has been applied to preclinical studies, providing quantitative behavioural assessment with a reasonable clinical analogue. However, available gait analysis technology for small animals is somewhat limited. Furthermore, technological and analytical challenges can limit the effectiveness of preclinical gait analysis. The Gait Analysis Instrumentation and Technology Optimized for Rodents (GAITOR) Suite is designed to increase the accessibility of preclinical gait analysis to researchers, facilitating hardware and software customization for broad applications. Here, the GAITOR Suite’s utility is demonstrated in 4 models: …

Greenhouse Gas Emissions From Beef Feedlot Surface Materials As Affected By Diet, Moisture, Temperature, And Time, Bryan L. Woodbury, John E. Gilley, David B. Parker, Bobbi S. Stomer

Department of Agricultural and Biological Systems Engineering: Faculty Publications

A laboratory study was conducted to measure the effects of diet, moisture, temperature, and time on greenhouse gas (GHG) emissions from feedlot surface materials (FSM). The FSM were collected from open-lot pens where beef cattle were fed either a dry-rolled corn (DRC) diet containing no wet distillers grains with solubles (WDGS) or a DRC diet containing 35% WDGS. The FSM were collected, air-dried or mixed with 3.0 L of water to represent dry or wet conditions, and then incubated at temperatures of 5°C, 15°C, 25°C, or 35°C. Static flux chambers were used to quantify GHG emissions over a 14-day period. …

Surface Detention On Cropland, Rangeland, And Conservation Reserve Program Areas, John E. Gilley

Department of Agricultural and Biological Systems Engineering: Faculty Publications

One of the factors contributing to overland flow on upland areas is water stored temporarily in a thin sheet on the soil surface as surface detention. This study was conducted to quantify surface detention on selected cropland, rangeland, and Conservation Reserve Program (CRP) sites. Surface detention was determined from the recession portion of runoff hydrographs corresponding with the period when rainfall had ceased but runoff continued. The hydrographs were generated from six previously reported rainfall simulation studies conducted on paired 3.7 m wide  10.7 m long plots on which approximately 128 mm of rainfall was applied. Surface detention values …

Evaluation Of The Accuracy Of Machine Reported Can Data For Engine Torque And Speed (J1939), Rodney A. Rohrer, Joe D. Luck, Santosh K. Pitla, Roger M. Hoy

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Most modern off-road machinery use embedded electronic controllers connected to a controller area network (CAN) to broadcast machine information for on-board processes and diagnostics. Commercially available tools can record CAN data for a variety of research and commercial uses. For agricultural tractors, there is an opportunity to create advanced test procedures that are more representative of field operations and that could supplement existing machine performance tests, such as the OECD Code 2 Standard Code for the Official Testing of Agricultural and Forestry Tractor Performance. CAN parameters provide an efficient way to collect tractor performance data during field operations. However, the …

Crop Evapotranspiration, Irrigationwater Requirement And Water Productivity Of Maize From Meteorological Data Under Semiarid Climate, Koffi Djaman, Michael O'Neill, Curtis K. Owen, Daniel Smeal, Komlan Koudahe, Margaret West, Samuel Allen, Kevin Lombard, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Under the semiarid climate of the Southwest United States, accurate estimation of crop water use is important for water management and planning under conservation agriculture. The objectives of this study were to estimate maize water use and water productivity in the Four Corners region of New Mexico. Maize was grown under full irrigation during the 2011, 2012, 2013, 2014 and 2017 seasons at the Agricultural Science Center at Farmington (NM). Seasonal amounts of applied irrigation varied from 576.6 to 1051.6 mm and averaged 837.7 mm and the total water supply varied from 693.4 to 1140.5 mm. Maize actual evapotranspiration was …

Unmanned Aerial Systems-Based Remote Sensing For Monitoring Sorghum Growth And Development, Sanaz Shafian, Nithya Rajan, Ronnie Schnell, Muthukumar Bagavathiannan, John Valasek, Yeyin Shi, Jeff Olsenholler

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Unmanned Aerial Vehicles and Systems (UAV or UAS) have become increasingly popular in recent years for agricultural research applications. UAS are capable of acquiring images with high spatial and temporal resolutions that are ideal for applications in agriculture. The objective of this study was to evaluate the performance of a UAS-based remote sensing system for quantification of crop growth parameters of sorghum (Sorghum bicolor L.) including leaf area index (LAI), fractional vegetation cover (f_c) and yield. The study was conducted at the Texas A&M Research Farm near College Station, Texas, United States. A fixed-wing UAS equipped with a …

Rapeseed Seedling Stand Counting And Seeding Performance Evaluation At Two Early Growth Stages Based On Unmanned Aerial Vehicle Imagery, Biquan Zhao, Jian Zhang, Chenghai Yang, Guangsheng Zhou, Youchun Ding, Yeyin Shi, Dongyan Zhang, Jing Xie, Qingxi Liao

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The development of unmanned aerial vehicles (UAVs) and image processing algorithms for field-based phenotyping offers a non-invasive and effective technology to obtain plant growth traits such as canopy cover and plant height in fields. Crop seedling stand count in early growth stages is important not only for determining plant emergence, but also for planning other related agronomic practices. The main objective of this research was to develop practical and rapid remote sensing methods for early growth stage stand counting to evaluate mechanically seeded rapeseed (Brassica napus L.) seedlings. Rapeseed was seeded in a field by three different seeding devices. A …

Nitric Oxide Sensors For Biological Applications, Nicole M. Iverson, Eric M. Hofferber, Joseph A. Stapleton

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Nitric oxide (NO) is an essential signaling molecule within biological systems and is believed to be involved in numerous diseases. As a result of NO’s high reaction rate, the detection of the concentration of NO, let alone the presence or absence of the molecule, is extremely difficult. Researchers have developed multiple assays and probes in an attempt to quantify NO within biological solutions, each of which has advantages and disadvantages. This review highlights many of the current NO sensors, from those that are commercially available to the newest sensors being optimized in research labs, to assist in the understanding and …

Evaluation Of Critical Nitrogen And Phosphorus Models For Maize Under Full And Limited Irrigation Conditions, Koffi Djaman, Suat Irmak

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Proper nitrogen (N) fertiliser application rates and timing of application, coupled with optimum irrigation management can improve the sustainability of maize production and reduce the risk of environmental contamination by nutrients. The impact of full and limited irrigation and rainfed conditions on in-season maize (Zea mays L.) shoot biomass nutrient concentration and critical N and phosphorus (P) indices were evaluated using a combination of measured nutrients and critical N and P models in south central Nebraska in 2009 and 2010. Four irrigation treatments [fully-irrigated treatment (FIT), 75% FIT, 60% FIT and 50% FIT) and rainfed] were imposed. Irrigation regimes …

Phenotypic Responses To Interspecies Competition And Commensalism In A Naturally Derived Microbial Co-Culture, Nymul Khan, Yukari Maezato, Ryan S. Mcclure, Colin J. Brislawn, Jennifer M. Mobberley, Nancy Isern, William B. Chrisler, Lye Meng Markillie, Brett M. Barney, Hyun-Seob Song, William C. Nelson, Hans C. Bernstein

Department of Agricultural and Biological Systems Engineering: Faculty Publications

The fundamental question of whether different microbial species will co-exist or compete in a given environment depends on context, composition and environmental constraints. Model microbial systems can yield some general principles related to this question. In this study we employed a naturally occurring co-culture composed of heterotrophic bacteria, Halomonas sp. HL-48 and Marinobacter sp. HL- 58, to ask two fundamental scientific questions: 1) how do the phenotypes of two naturally co-existing species respond to partnership as compared to axenic growth? and 2) how do growth and molecular phenotypes of these species change with respect to competitive and commensal interactions? We …

Impacts Of Cover Crops On Soil Physical Properties: Field Capacity, Permanent Wilting Point, Soil-Water Holding Capacity, Bulk Density, Hydraulic Conductivity, And Infiltration, Suat Irmak, Vivek Sharma, Ali T. Mohammed, Koffi Djaman

Department of Agricultural and Biological Systems Engineering: Faculty Publications

Field experiments were carried out to quantify the effects of cover cropping on soil physical properties. Field capacity (FC), permanent wilting point (PWP), soil-water holding capacity (SWHC), bulk density (  b), saturated and unsaturated hydraulic conductivity (Ks and Kus, respectively), and infiltration rates were measured and compared for four land cover treatments [cover crop without seed maize (CC), seed maize followed by cover crop (SCCC), bare soil, and seed maize without cover crop (SC)] in three large-scale production fields (~64 ha each) with silt loam soil in the 2012-2013, 2013-2014, 2014-2015, and 2015-2016 cover crop growing seasons. All production …

Comparison Of Three Regionalization Techniques For Predicting Streamflow In Ungaged Watersheds In Nebraska, Usa Using Swat Model, Michael W. Van Liew, Aaron R. Mittelstet

Department of Agricultural and Biological Systems Engineering: Faculty Publications

This study compared three approaches, regional averaging, nearest neighbor, and donor techniques, to regionalize parameters in the Soil and Water Assessment Tool (SWAT) on eleven watersheds located in the Dissected Plains, Plains, and Rolling Hills Landforms in the eastern portion of the State of Nebraska, USA. Within the Rolling Hills Landform, three watersheds were randomly selected as calibration watersheds while two were randomly selected as validation watersheds. Two watersheds were randomly selected as calibration watersheds while one was randomly selected as a validation watershed within each of the Dissected Plains and Plains Landforms. The seven calibration watersheds were used to …