Chemistry Commons^™

Adsorption Of Microcystins To Sediment Affects Their Bioavailability And Remediation, Ashley Womer

Theses and Dissertations

The freshwater harmful algae Microcystis spp produces a family of toxins called microcystins1. These species of algae are known to release microcystins from their cells directly into the surrounding water2. This creates an array of human health risks depending on the fate and transport of the toxins in the water column3,4. Risk modelling and previous literature has shown that sediment is a sink for free microcystin, microcystin can be stably adsorbed to sediment for hundreds of years, and its adsorption to sediment is determined by the sediment adsorption partitioning coefficient (Kd)5,6,7. In this work it is hypothesized that the sediment …

Synthesis Of Carborane Pincer Complexes And Exploration Of The Reactivity Of Metal-Boron Bonds, Hindurangalage Don Asela Chathumal Jayaweera

Theses and Dissertations

Exploration of transition metal complexes with metal-boron bonds for the cooperative bond activation of small molecules in catalysis is one of the recent developments in novel synthetic strategies. The use of boron clusters as a modular platform for the formation of metal-boron bond has been successfully utilized by our and other groups. Carboranes are icosahedral boron-carbon molecular clusters that have gained attraction as multifunctional ligands due to their unique geometry, electronic properties, and versatility of functionalization methods. Their 3-D structure exerts a steric bulk around the exohedral substituent, either metal or non-metal center. Furthermore, due to the cluster geometry, five …

Well–Defined Donor–Acceptor Materials, Gabrielle A. Leith

Theses and Dissertations

The modularity of multivariant scaffolds such as covalent–organic frameworks (COFs) provides an unprecedented level of control in the alignment of donor (D) and acceptor (A) units, a demand that is driven by the production of optoelectronic, photonic, and spintronic devices. The foray into novel motifs bearing D-A ensembles in frameworks has been applied towards material property modulation for device performance enhancement. This dissertation presents an emerging trend in the development of D-A interfaces by highlighting recent advances probing D-A interactions in porous crystalline matrices and co-crystals, with a focus on energy transfer (ET) and charge transfer (CT) processes in pre-designed …

Photophysics And Electronic Properties Of Photochromic Metal-Organic Frameworks, Corey R. Martin

Theses and Dissertations

Modulation of materials properties through light-based illumination has the capability to expand the technology sector due to stimuli-responsive dynamic behavior that cannot be achieved in traditional materials. For example, reversibly tuning photophysical profiles of such materials allows for switching between discrete states that is a key aspect for the developing logic gates, spatially- and temporally-resolved sensors, and on-demand drug delivery systems. My efforts have focused on employment of metal-organic frameworks (MOFs) as a versatile platform for the material development which contain photochromic moieties allowing for tailoring their electronic properties. Our group has expanded this direction to include heterometallic and actinide-containing …

Tailored Nanomaterials For Advancing Fast-Charge Research, Wessel Van Den Bergh

Theses and Dissertations

The demand for fast, energy-dense storage has driven research into nanoscale intercalation materials. Nanoscale materials not only accelerate kinetics but also can modify reaction path thermodynamics, intercalant solubility, and diffusivity. Pioneering works have revealed such nanoscale changes, often without the need to separately probe each fundamental transport process. While electrodes can be designed to have one transport processes dominant, there remain opportunities to better understand energy-dense designs with multiple concomitant transport constraints. The contents herein highlight emerging an method using tailored, energy-dense nanomaterials and the process of elimination to clearly correlate architectural features to performance. For example, this method revealed …

Sustainable Polymers: Upcycling Poly(Vinyl Chloride) And Mimicking Low Density Polyethylene, Ian Baxter

Theses and Dissertations

In this research, increasing the sustainability of polymers was investigated through two main methods. The upcycling of poly(vinyl chloride) and the creation of polymer mimics to create degradable low-density polyethylene. In the first chapter, an overview of the sustainability issues of polymers is presented and approaches are described on how their sustainability may be increased through the upcycling of polymers or the synthesis of degradable polymers that mimic the properties of petrol-based polymers.

Chapter 2 contains the progress on the upcycling of PVC using high oleic soybean oil. Soybean oil can soften PVC making it less brittle than pure PVC. …

From Persistent Radicals To Conductivity: A Structure Property Investigation In A Series Of Urea-Tethered Halogenated Triphenylamines, Muhammad Saddam Hossain

Theses and Dissertations

Triphenylamines (TPAs) are known to form persistent organic radicals either by chemical, electrochemical or photoinduced oxidation. Typically, fully para-substituted TPAs form stable radical cations while the radical cations in partially substituted systems quickly degrade. Herein, we study the effects of solid-state organization on a series of urea tethered halogenated TPAs 1 (X = H, Cl, Br, I) and compare their radical cation formation and persistence after UV-irradiation. These halogenated urea tethered TPAs were examined by single-crystal X-ray diffraction where their assembly was guided by threecentered urea hydrogen bonding interaction. As expected, all compounds form photogenerated radical cations in solution, but …

Investigations On The Surface Chemistry Of Colloidal Quantum Dots Towards Fluorescent Biological Probes, John Hardin Dunlap

Theses and Dissertations

Colloidal semiconductor quantum dots (QDs) have garnered significant interest as promising materials for biological applications due to their improved photostability and narrow, tunable photoluminescence properties compared to organic fluorophores. To facilitate their utility as fluorescent bioimaging probes, QDs must undergo post-synthetic modifications to exchange their native hydrophobic ligands from synthesis with hydrophilic ones that enable colloidal dispersions in aqueous environments. Many examples exist that demonstrate surface modifications for water-soluble QDs and their efficacy in biological systems, however, there is a need to develop a more thorough understanding of how hydrophilic ligands coordinate to QD surfaces in order to develop more …

Teaching An Old Dog New Tricks: Synthesis And Applications Of Novel Polybenzimidazole (Pbi) Membranes, Laura Ann Murdock

Theses and Dissertations

Polybenzimidazoles (PBIs) represent a class of performance polymers that display exceptional thermal and oxidative stability. For almost thirty years, PBI membranes have been investigated as promising candidates for next-generation alternative energy devices, including high temperature polymer electrolyte membrane fuel cells (HT-PEMFCs) and vanadium redox flow batteries (VRBs). Issues with the production of PBI membranes arise from their inherent low solubility in organic solvents. Thus, conventional approaches typically yield membranes that have limited molecular weight and generate significant waste in preparation, due to the large quantity of solvent required to dissolve PBIs for membrane casting.

Presented herein is the development of …

Investigating The Chemistry Of Harmful Algal Blooms And Microbial Communities In The Natural Environment, Samuel Patrick Putnam

Theses and Dissertations

Cyanobacteria has existed on the planet for over 3 billion years, and as technology, science, and industry have allowed us to shape our world, these changes have caused a proliferation of biomass. Higher carbon dioxide levels in the atmosphere, warmer temperatures, and rapid increases in the nutrient cycle have created excellent growing conditions for cyanobacteria, making them endemic in fresh waters throughout the world. The work in this dissertation was directed towards the secondary metabolites produced by cyanobacteria and other surrounding microbes and understanding their concentrations and release in natural systems. Analytical methods were developed for the extraction and quantification …

Enhancing Charge Carrier Mobility In Colloidal Quantum Dots For Technological Applications, Fiaz Ahmed

Theses and Dissertations

Colloidal quantum dots (QD) are promising semiconducting materials to engineer photovoltaic and optoelectronic devices due to tunable size-dependent absorption and emission properties. These materials are important as they don’t need complicated equipment and huge setup investment for industrial applications. If formulated into a kind of stable nano-ink, these QDs can be incorporated into devices using the most economical processing technologies, spray or roll to roll printing. More importantly, these are compatible with thin-film stacked devices and circuitry that can be formed on heat-sensitive and flexible substrates to make flexible wearable devices and sensors that are difficult to achieve with crystalline-based …

Polymeric Sorbents For Solid-Phase Extraction (Spe) Of Polar Analytes And Carbon Dioxide Capture, Ishwor Karki

Theses and Dissertations

The main topics of this dissertation are: 1) the study of hydrophilic-lipophilic balance (HLB) polymer monoliths for solid-phase extraction (SPE) applications, 2) molecularly imprinted polymers (MIPs) for capturing the CO2 gas and 3) the application of symmetry-adapted perturbation theory (SAPT) calculations to examine the origins of non-covalent interactions.

HLB polymers are popular sorbent materials in separation science. The Divinylbenzene-co-N-vinylpyrrolidone (DVB-co-NVP) polymer is one of the most widely used general-purpose HLB polymers. Despite the popularity of HLB polymer stationary phases, the studies of the adsorption properties of DVB-co-NVP have only been reported over a narrow …

Optimization And Application Of Electrochemical Probes For Neurotransmitter Detection, Colby E. Witt

Theses and Dissertations

The brain is a complex matrix that is difficult to study. Signaling molecules, neurotransmitters, are constantly being released and sequestered back into neurons within milliseconds to facilitate communication and normal function, a process called neurotransmission. There are few analytical techniques available to selectively probe such a dynamic system, and even fewer can detect these discrete changes in real-time. In order to make robust measurements in the brain you need speed, sensitivity, selectivity and small probe size, which are encompassed by fast-voltammetry with microelectrodes. Traditional fast-voltammetry at carbon fiber microelectrodes (fast-scan cyclic voltammetry (FSCV)) requires background subtraction to overcome the large …

Characterization Of A Novel Fe-S Cluster Transfer Pathway Between Grx4 And Sufa In Escherichia Coli, Enis Sanchez

Theses and Dissertations

Biogenesis of iron-sulfur (Fe-S) clusters is an essential process in living organisms due to the critical role of Fe-S cluster proteins in a myriad of cellular functions. During the assembly of Fe-S clusters, multi-protein complexes are used to drive the mobilization and protection of reactive sulfur and iron intermediates, regulate assembly of various Fe-S clusters on an ATPase-dependent, multi-protein scaffold, and target nascent clusters to their downstream protein targets. In each of the Fe-S cluster biogenesis steps, specific protein-protein interactions (PPIs) are required for proper function of the assembly pathway. The target pathway is the sulfur formation (Suf) pathway for …

Developing Covalent-Organic Frameworks For Protecting Against Radiation, Megan J. Francis

Senior Theses

This research focuses on the development of lightweight, thermostable dual-function materials for secondary radiation protection and sensing by the integration of hydrogen-rich aliphatic chains inside the porous matrix of covalent-organic frameworks (COFs). The main aims of this project are the synthesis of organic linkers for forming a robust porous COF, synthesizing the porous COF through a condensation reaction, the development of hydrogen-rich aliphatic chains, and integration of aliphatic chains into COFs through click chemistry. This manuscript outlines the methodology and development of a novel self-assembled crystalline, porous material engineered to combine the functions of a shield and sensitive dosimeter. The …

Exploration Of Vase As An Extraction Method For Emerging Disinfection By-Products And Acidic Methanol As A Safe And Effective Derivatization Method For Haloacids, Madison Leigh Kilpatrick

Theses and Dissertations

This project aims to create an environmentally friendly, robust, and efficient extraction and preconcentration method in both the detection and quantification of various disinfection by-products (DBPs). Vacuum assisted sorbent extraction (VASE) is a newly developed method in the extraction of both volatile organic compounds (VOCs) and semi-volatile organic compounds (SVOCs). This extraction method is paired with a Thermo Scientific TSQ Quantum Triple Quadrupole GC-MS system for the quantification of DBPs. VASE outperforms current DBP extraction methods, with liquid-liquid extraction (LLE) being the most used alternative, because of its minimal use of solvent, high level of automation, and over-all ease of …

Alkyne Cyclization Involving A Zwitterionic Hexaruthenium Carbido Carbonyl Complex And The Synthesis Of The First-Nitrido Heterometallic Carbonyl Cluster Complexes, Nutan Damodhar Wakdikar

Theses and Dissertations

Chapter 1 introduces two related topics with the primary focus on the background of zwitterions and the conceptual understanding of a metal-complexed zwitterion. It also discusses the potential of a metal-complexed zwitterion for a carbon-carbon bond formation reaction. Synthesis of the metal carbonyl cluster, Ru6(µ6-C)(µ-CO)(CO)16, is also discussed in detail. Then, the background with the importance of heterometallic cluster complexes is discussed with the help of various examples used for catalysis.

The reaction of hexaruthenium carbido carbonyl cluster, Ru6(µ6-C)(µ-CO)(CO)16, with C2H2 and Me3NO yielding first examples of two new zwitterionic complexes, Ru6C(CO)15(μ−η2−C2H2NMe3), 2.2, and Ru6C(CO)14(μ3−η4−C4H4NMe3), 2.3, are presented in Chapter …

Characterization Of A High Affinity Glutathione Transporter And Its Impact On Glutathione Depleted Saccharomyces Cerevisiae, Tirthankar Bandyopadhyay

Theses and Dissertations

Thiol-disulfide redox homeostasis is integral for maintaining the redox status of proteins and other thiol-containing molecules within the cell. Among the many antioxidants and detoxifying enzymes and small peptides, glutathione (GSH) has proven to be critical for the preservation of function and structural integrity of the cell due to its functionality in areas like oxidative protein folding, thiol redox control, reactive oxygen species (ROS) and xenobiotics removal as well as iron regulation and Fe-S cluster biogenesis. Therefore, our studies are aimed at elucidating the factors that control GSH trafficking and metabolism in the model eukaryote Saccharomyces cerevisiae (baker’s yeast). Using …

Ahr Expression On Rorc-Expressing Immune Cells Is Essential For I3c-Mediated Protection Against Colitis, Michal C. Williams

Senior Theses

Colitis is an inflammatory bowel disorder (IBD) whose etiology is attributed to modification in the luminal microbiota and dysregulation in the immune response. Indole is a signaling molecule which is naturally produced by gut luminal microbiota. Indole-3- carbinol (I3C) is a compound commonly found in vegetables and a ligand for the aryl hydrocarbon receptor (AhR). Previous studies have detected decreased expression and activation on the AhR receptor in colitis patients, thought to possibly alter gut microbiota metabolism, subsequently promoting colitis. 1 AhR, expressed in a variety of immune and epithelial cells, contributes to gut homeostasis by affecting vital mediators such …

Plasmonic Metallic And Semiconductor Nanomaterials, Mengqi Sun

Theses and Dissertations

The earliest account of localized surface plasmon resonance (LSPR) has to date back to the ancient age of Rome in 400 A.D. The famous glass of Lycurgus cup told the story of unique light-and-matter interaction at the nanoscale that confines the electromagnetic field resonance at its surface and therefore allows LSPR feature to noticeably arise. The conventional metallic LSPR nanomaterials, like Au and Ag nanoparticles attract constant attentions due to their synthetic simplicity, chemical robustness, and visible spectral response. Its ability to generate sensitive dielectric sensing of the surroundings, strong electromagnetic field and active charge carriers upon optical excitation triggered …

Characterization Of Ph – Responsive Nanocage Based On The Ferritin Iron Storage Protein, Satyam Singh

Theses and Dissertations

The iron-storage protein ferritin (Ftn) assembles into a protein cage structure with 24 subunits and octahedral (4-fold, 3-fold, 2-fold) symmetry. Each monomeric subunit contains a robust four-helix bundle fold. The fully assembled Ftn structure has a high degree of thermal stability (up to 100°C), a mono dispersed size (12 nm in diameter), and a large central cavity (7-8 nm in diameter). The central cavity stores ferric iron in phylogenetically diverse group of organisms, including humans. The central cavity has been used for encapsulation of cargoes such as other metals, contrast agents for imaging, small molecule drugs for therapy, …

Colloidal Semiconductor Quantum Dots: Solution Processing And Heterostructure-Based Optoelectronics, Mathew L. Kelley

Theses and Dissertations

Colloidal semiconductor quantum dots (QDs) are attractive candidates for high-efficiency solar cells and uncooled multiplexed photodetectors due to their favorable characteristics including large absorption cross-sections, size-tunable bandgap energies spanning the ultraviolet (UV) to short wave infrared, and solution processability. These QD-based optoelectronic devices operate on the basis of efficient photogenerated charge migration within QD solids and charge separation and recombination at electrical junctions, underscoring the need for (1) processing strategies that facilitate charge transport and (2) characterization techniques that robustly interrogate charge separation at QD interfaces. Here, my work on the post-synthetic processing and surface modifications of several semiconductor QDs, …

Developing And Understanding Catalysts For Organic Synthesis, Shelby Dickerson

Theses and Dissertations

Organic synthesis relies on improving catalyst designs and understanding reaction mechanisms for the advancement of the field. This dissertation will describe projects in both of these areas. First it will cover new photocatalysts in the aim of maintaining reactivity while increasing solubility in less polar solvents, and second understanding the importance of intermolecular interactions between new nucleophilic catalysts and substrates.

Photocatalysis has become a major focus as a sustainable pathway for chemical reactions with visible light photocatalysts performing a large range of reactions such as redox reactions, cyclization reactions, and energy transfer reactions. Chapter 1 will discuss classes of organic …

Cationic Metallo-Polyelectrolytes: Synthesis And Application In Self-Assembly And Mechanochemistry, Yujin Cha

Theses and Dissertations

In this dissertation, cationic metallocene-containing polyelectrolytes were investigated for the construction of nano-objects by CDSA and the mechanical force-responsive polymer. The self-assembly behavior and mechanically induced polymer deformation were characterized and discussed.

In Chapter 1, the overall background and recent development of metallocene-containing polymers as well as their applications in self-assembly and polymer mechanochemistry were introduced. Primary research objectives were described.

The first section of the dissertation on the CDSA of cationic metallocene-containing block copolymers was provided in Chapter 2. The preparation of PCL-b-PCoAEMAs was achieved through ring-opening polymerization (ROP) of ε-caprolactone and reversible addition-fragmentation chain-transfer (RAFT) polymerization of cobaltocenium …

Conservation Of Polyester-Urethane Magnetic Audio Tapes And Discrimination Of Textile Fiber Dyes Using Spectroscopy And Chemometrics, Nilmini Hemanthika Ratnasena

Theses and Dissertations

This dissertation explores and discusses conservation of magnetic audio tapes and discrimination of fiber dyes employing spectroscopic techniques and chemometrics.

Conservation of polyester urethane magnetic audio tapes has become a major challenge since they are susceptible to degradation via hydrolysis. The world’s modern cultural history is vastly recorded in this media, and now conservationists need a non-destructive technique to determine the playability status of these tapes. Once conservationists identify degraded tapes, they can be subjected to the baking process. This process temporarily reverses hydrolysis and provides enough time to digitize tapes, preserving information for future generations. The first three chapters …

Automating And Implementing Complex, Multistep Sample Preparation Processes To Generate Reproducible Proteomic And Phosphoproteomic Data, Brian Todd Mullis

Theses and Dissertations

Phosphorylation is the most common post-translational modification that occurs within the cell and is intricately involved in many biological processes. It is important to understand the roles that protein kinases and phosphatases play by mapping protein phosphorylation as many disease states stem from aberrant signaling events. With the advent of modern mass spectrometry (MS), researchers are now provided with more complex phosphorylation patterns from thousands of proteins in each mass spectrometric analysis. Further developments in quantification techniques, such as stable isotope labeling with amino acids in cell culture (SILAC) and label-free quantitation, have allowed researchers to reliably quantify changes to …

Fate Of Persistent Contaminants And Emerging Algal Toxins In Drinking Water And The Environment, Danielle Christine Westerman

Theses and Dissertations

Population growth and global climate change has resulted in the degradation of pristine water sources, causing issues like saltwater intrusion, persistent harmful algal blooms, and drought from population growth. Future reliance on alternative sources of drinking water to is expected globally, therefore, nontraditional sources of drinking water are becoming increasingly vital sources of potable water around the world. For example, desalination (typically by reverse osmosis), despite its high energy demands and high cost, is being utilized all over the world to meet drinking water demand. Wastewater reuse, the additional treatment of wastewater to produce drinking water, either directly or indirectly, …

Development Of A Liquid Biopsy: Using A Synthetic Lectin Array For The Detection Of Cancer, Mary Grace Hollenbeck

Theses and Dissertations

Cancer is the second leading cause of death worldwide with 9.6 million deaths in 2019. It is well known that early detection of cancer often leads to a better prognosis. However, due to drawbacks associated with current cancer screens (i.e. invasiveness, high false positive and negative rates) new or updated early detection methods are needed. Chapter one overviews current breast, colon, and prostate detection methods and the drawbacks associated with them. Additionally, this chapter presents an alternative detection method that utilizes an array of boronic acid functionalized synthetic lectins. We describe the development and progression of this array and show …

Studies Of The Chemistry Of Pentaruthenium Carbido Carbonyl Cluster Complexes With Aldehydes, Azobenzene And Alkynes, Humaiara Akter

Theses and Dissertations

Polynuclear metal carbonyl complexes serve as the bridging model between heterogeneous catalysis and homogeneous catalysis for the activation of small molecules. Ru5(m5-C)(CO)15 has been found to exhibit superior reactivity due to its unusual polynuclear metal geometry. possibilities of interconversions of ligand bonding modes, and the formation of the electronically unsaturated metal species. C-H activation in aldehydes and azobenzene of pentaruthenium cluster complexes is described in chapters 2 and 3 respectively. The formation of new hydrocarbyl zwitterions and C – C coupling ethyne to the carbido carbon in the complex, and the alkyne insertion reactions with pentaruthenium cluster complexes are described …

Sparse Modeling For Predicting Class Assignments For Trace Forensic Evidence, Dayla Christine Rich

Theses and Dissertations

Numerous disciplines in forensic science utilize various types of spectral data when analyzing evidence. Spectral techniques are particularly critical for the analysis of trace evidence, as these methods are normally non-destructive. Preserving evidence, especially trace evidence, is of high priority in a forensic laboratory setting. Once a piece of evidence has been fully consumed, no more analyses can be performed. Typically, visual comparison, or spectral overlay, is performed to compare questioned samples (evidence) to standards or knowns. However, such an approach may not be optimal in distinguishing the subtle, yet highly important, discriminating characteristics present in the spectra. As statistical …