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Chesapeake Bay Fish–Osprey (Pandion Haliaetus) Food Chain: Evaluation Of Contaminant Exposure And Genetic Damage, Rebecca S. Lazarus, Barnett A. Rattner, Peter C. McGowan, Robert C. Hale, Natalie K. Karouna-Renier, Richard A. Erickson, Mary Ann Ottinger 2016 US Geological Survey

Chesapeake Bay Fish–Osprey (Pandion Haliaetus) Food Chain: Evaluation Of Contaminant Exposure And Genetic Damage, Rebecca S. Lazarus, Barnett A. Rattner, Peter C. Mcgowan, Robert C. Hale, Natalie K. Karouna-Renier, Richard A. Erickson, Mary Ann Ottinger

United States Geological Survey: Staff Publications

From 2011 to 2013, a large-scale ecotoxicological study was conducted in several Chesapeake Bay (USA) tributaries (Susquehanna River and flats, the Back, Baltimore Harbor/Patapsco Rivers, Anacostia/ middle Potomac, Elizabeth and James Rivers) and Poplar Island as a mid-Bay reference site. Osprey (Pandion haliaetus) diet and the transfer of contaminants from fish to osprey eggs were evaluated. The most bioaccumulative compounds (biomagnification factor>5) included p,p’-dichlorodiphenyldichloroethylene (DDE), total polychlorinated biphenyls (PCBs), total polybrominated diphenyl ethers (PBDEs), and bromodiphenyl ether (BDE) congeners 47, 99, 100, and 154. This analysis suggested that alternative brominated flame retardants and other compounds (methoxytriclosan) are not appreciably …


Immunoglobulin Detection Inwild Birds: Effectiveness Of Three Secondary Anti-Avian Igy Antibodies In Direct Elisas In 41 Avian Species, Carol A. Fassbinder-Orth, Travis E. Wilcoxen, Tiffany Tran, Raoul K. Boughton, Jeanne M. Fair, Erik K. Hofmeister, Jennifer L. Grindstaff, Jen C. Owen 2016 Creighton University

Immunoglobulin Detection Inwild Birds: Effectiveness Of Three Secondary Anti-Avian Igy Antibodies In Direct Elisas In 41 Avian Species, Carol A. Fassbinder-Orth, Travis E. Wilcoxen, Tiffany Tran, Raoul K. Boughton, Jeanne M. Fair, Erik K. Hofmeister, Jennifer L. Grindstaff, Jen C. Owen

United States Geological Survey: Staff Publications

1.Immunological reagents for wild, non-model species are limited or often non-existent for many species.

2. In this study, we compare the reactivity of a newanti-passerine IgY secondary antibody with existing secondary antibodies developed for use with birds. Samples from 41 species from the following six avian orders were analysed: Anseriformes (1 family, 1 species), Columbiformes (1 family, 2 species), Galliformes (1 family, 1 species), Passeriformes (16 families, 34 species), Piciformes (1 family, 2 species) and Suliformes (1 family, 1 species). Direct ELISAs were performed to detect total IgY using goat anti-passerine IgY, goat anti-chicken IgY or goat anti-bird IgY secondary …


Elevation Dynamics In A Restored Versus A Submerging Salt Marsh In Long Island Sound, Shimon C. Anisfeld, Troy D. Hill, Daonald R. Cahoon 2016 Yale University

Elevation Dynamics In A Restored Versus A Submerging Salt Marsh In Long Island Sound, Shimon C. Anisfeld, Troy D. Hill, Daonald R. Cahoon

United States Geological Survey: Staff Publications

Accelerated sea-level rise (SLR) poses the threat of salt marsh submergence, especially in marshes that are relatively low-lying. At the same time, restoration efforts are producing new low-lying marshes, many of which are thriving and avoiding submergence. To understand the causes of these different fates, we studied two Long Island Sound marshes: one that is experiencing submergence and mudflat expansion, and one that is undergoing successful restoration. We examined sedimentation using a variety of methods, each of which captures different time periods and different aspects of marsh elevation change: surface-elevation tables, marker horizons, sediment cores, and sediment traps. We also …


Endangered Species Research In The Caribbean, James W. Wiley 2016 University of Nebraska - Lincoln

Endangered Species Research In The Caribbean, James W. Wiley

United States Geological Survey: Staff Publications

Although indigenous Amerindian populations adversely affected the biota of their island environments, it was not until the arrival of Europeans that populations of many plant and animal species in the Caribbean Islands declined dramatically (Snyder and others, 1987). Island species are particularly vulnerable to changes in the environment, which, in the extreme, can lead to their extinction. The small populations of many species that occupy islands have limited gene pools and typically show extremes of specialization, characteristics that place those species at high risk for decline and extinction with rapid environmental change. The most important factor in the decline of …


The Bird Banding Laboratory: Support For And Collaboration With Research At Patuxent, John Tautin 2016 University of Nebraska - Lincoln

The Bird Banding Laboratory: Support For And Collaboration With Research At Patuxent, John Tautin

United States Geological Survey: Staff Publications

Located at Patuxent Research Refuge (PRR) and functionally part of the Patuxent Wildlife Research Center (Patuxent), Laurel, MD, the Bird Banding Laboratory (BBL) is the service and administrative center for bird banding in the United States. Over the years, the BBL has been associated with both the PRR and Patuxent, which collectively are commonly referred to by the public (and in this chapter) as “Patuxent.” The BBL issues permits and bands; supplies banding software, instructional materials, and technical advice; coordinates the use of auxiliary markers such as neck collars and radio transmitters; serves as the repository for banding records and …


Endangered Species Research In Hawaii: The Early Years (1965–87), Michael J. Scott, Cameron B. Kepler 2016 University of Nebraska - Lincoln

Endangered Species Research In Hawaii: The Early Years (1965–87), Michael J. Scott, Cameron B. Kepler

United States Geological Survey: Staff Publications

Hawaii is an ecologically isolated archipelago 2,500 miles from the nearest continent. Its isolation resulted in a taxonomically unbalanced flora and fauna with remarkable examples of adaptive radiation among those groups of organisms that won the dispersal sweepstakes. It was one of the last oceanic island groups to be populated by humans, about 900 A.D. by Polynesian travelers and in 1778 by Europeans. Relatively recent colonization by humans did not save it, however, from the biodiversity losses suffered by other isolated archipelagos—it only delayed them (Scott and others, 1988; Pratt and others, 2009a).


Seasonal Variation In The Ndvi–Species Richness Relationship In A Prairie Grassland Experiment (Cedar Creek), Ran Wang, John A. Gamon, Rebecca A. Montgomery, Philip A. Townsend, Arthur I. Zygielbaum, Keren Bitan, David Tilman, Jeannine Cavender-Bares 2016 University of Alberta

Seasonal Variation In The Ndvi–Species Richness Relationship In A Prairie Grassland Experiment (Cedar Creek), Ran Wang, John A. Gamon, Rebecca A. Montgomery, Philip A. Townsend, Arthur I. Zygielbaum, Keren Bitan, David Tilman, Jeannine Cavender-Bares

School of Natural Resources: Faculty Publications

Species richness generally promotes ecosystem productivity, although the shape of the relationship varies and remains the subject of debate. One reason for this uncertainty lies in the multitude of methodological approaches to sampling biodiversity and productivity, some of which can be subjective. Remote sensing offers new, objective ways of assessing productivity and biodiversity. In this study, we tested the species richness–productivity relationship using a common remote sensing index, the Normalized Difference Vegetation Index (NDVI), as a measure of productivity in experimental prairie grassland plots (Cedar Creek). Our study spanned a growing season (May to October, 2014) to evaluate dynamic changes …


The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center: January 2016, Martha Shulski, Natalie Umphlett, Crystal J. Stiles 2016 University of Nebraska-Lincoln

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center: January 2016, Martha Shulski, Natalie Umphlett, Crystal J. Stiles

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the director........................................1

Staff spotlight...........................1

HPRCC staff changes..............2

Product highlight....................2

Research highlight..................2

Partnership spotlight.............3

AWDN information.................4

Update on regional climate conditions..................................4

Outreach/engagement.........5

Recent and upcoming travel and activities.............................6


Modeling The Effects Of Tile Drain Placement On The Hydrologic Function Of Farmed Prairie Wetlands1, Brett Werner, John Tracy, W. Carter Johnson, Richard A. Voldseth, Glenn R. Guntenspergen, Bruce Millett 2016 Centre College, Danville

Modeling The Effects Of Tile Drain Placement On The Hydrologic Function Of Farmed Prairie Wetlands1, Brett Werner, John Tracy, W. Carter Johnson, Richard A. Voldseth, Glenn R. Guntenspergen, Bruce Millett

United States Geological Survey: Staff Publications

The early 2000s saw large increases in agricultural tile drainage in the eastern Dakotas of North America. Agricultural practices that drain wetlands directly are sometimes limited by wetland protection pro- grams. Little is known about the impacts of tile drainage beyond the delineated boundaries of wetlands in upland catchments that may be in agricultural production. A series of experiments were conducted using the well-published model WETLANDSCAPE that revealed the potential for wetlands to have significantly shortened surface water inundation periods and lower mean depths when tile is placed in certain locations beyond the wet- land boundary. Under the soil conditions …


Late Holocene Expansion Of Ponderosa Pine (Pinus Ponderosa) In The Central Rocky Mountains, Usa, Jodi R. Norris, Julio L. Betancourt, Stephen T. Jackson 2016 United States National Park Service

Late Holocene Expansion Of Ponderosa Pine (Pinus Ponderosa) In The Central Rocky Mountains, Usa, Jodi R. Norris, Julio L. Betancourt, Stephen T. Jackson

United States National Park Service: Publications

Aim: Ponderosa pine (Pinus ponderosa) experienced one of the most extensive and rapid post-glacial plant migrations in western North America. We used plant macrofossils from woodrat (Neotoma) middens to reconstruct its spread in the Central Rocky Mountains, identify other vegetation changes coinciding with P. ponderosa expansion at the same sites, and relate P. ponderosa migrational history to both its modern phylogeography and to a parallel expansion by Utah juniper (Juniperus osteosperma).

Location: Central Rocky Mountains, Wyoming and Montana, and Black Hills, Wyoming and South Dakota, USA.

Methods: Plant macrofossils were analysed in …


Gene Flow And Genetic Structure Of The Seagrass Thalassia Hemprichii In The Indo-Australian Archipelago, Udhi Eko Hernawan 2016 Edith Cowan University

Gene Flow And Genetic Structure Of The Seagrass Thalassia Hemprichii In The Indo-Australian Archipelago, Udhi Eko Hernawan

Theses: Doctorates and Masters

How genetic variation is distributed across space (genetic structure) and what factors influence the spatial genetic structuring is one of the primary questions in population genetics. The interaction between species biology (e.g. life-history traits) and physical processes operating in the seascape over time, including palaeo-historical events (e.g. sea level fluctuations) and contemporary processes (e.g. ocean currents), have been predicted to influence the extent of gene flow and the spatial genetic structuring in marine organisms. However, the relative contribution of each factor in governing the genetic pattern remains unclear. This study examined the pattern of genetic structure and the factors influencing …


Adaptation On A Budget: How Vietnamese Innovators Are Trying To Design Their Way Out Of Climate Change, Shanti R. Johnson 2016 University of Montana

Adaptation On A Budget: How Vietnamese Innovators Are Trying To Design Their Way Out Of Climate Change, Shanti R. Johnson

Graduate Student Theses, Dissertations, & Professional Papers

In the rapidly developing Mekong Delta of Vietnam, young innovators are facing a challenge far greater than simply trying to catch up with the wealthier world. In a growing trend, the next generation of Vietnamese is acting under a common understanding: climate change is real, it’s here and the time to respond is growing short.

For over a decade, Southern Vietnam has consistently been ranked by international organizations like the Intergovernmental Panel on Climate Change as one of the most vulnerable places in the world to the impacts of climate change. That vulnerability is heightened by the fact that the …


Missing The Trees For The Forest: The Socioecological Significance Of Dispersed Farmland Trees In Northern Ethiopia, Jacob A. Wall 2016 Colby College

Missing The Trees For The Forest: The Socioecological Significance Of Dispersed Farmland Trees In Northern Ethiopia, Jacob A. Wall

Honors Theses

Scattered trees are prominent features in the agricultural landscape of the Ethiopian highlands. The dry Afromontane forests of the Amhara Region in northern Ethiopia have faced centuries of deforestation - the FAO estimates only 3% of the region is forested today. The remaining landscape has been largely converted into agricultural and grazing lands, with the exception of some limited government-protected lands, as well as thousands of small forest fragments left around Orthodox Churches (“church forests”). But while a growing body of scholarship has highlighted the ecological and cultural importance of church forests and other natural forest fragments, the roles of …


A Comparison Between 2010 And 2006 Air Quality And Meteorological Conditions, And Emissions And Boundary Conditions Used In Simulations Of The Aqmeii-2 North American Domain, Till E. Stoeckenius, Christian Hogrefe, Justin Zagunis, Timonthy M. Sturtz, Benjamin Wells, Tanarit Sakulyanontvittaya 2016 ENVIRON International Corp.

A Comparison Between 2010 And 2006 Air Quality And Meteorological Conditions, And Emissions And Boundary Conditions Used In Simulations Of The Aqmeii-2 North American Domain, Till E. Stoeckenius, Christian Hogrefe, Justin Zagunis, Timonthy M. Sturtz, Benjamin Wells, Tanarit Sakulyanontvittaya

United States Environmental Protection Agency: Publications

Several participants in Phase 2 of the Air Quality Model Evaluation International Initiative (AQMEII-2) who are applying coupled models to the North American domain are comparing model results for two years, 2006 and 2010, with the goal of performing dynamic model evaluation. From a modeling perspective, the differences of interest are the large reductions in domain total emissions of NOx (21%) and SO2 (37%) from 2006 to 2010 and significant differences in meteorological conditions between these two years. The emission reductions occurred mostly in the eastern U.S, with some reduction in emissions from western wildfires in 2010. Differences …


Potential Aquifer Vulnerability In Regions Down-Gradient From Uranium In Situ Recovery (Isr) Sites, James A. Saunders, Bruce E. Pivetz, Nathan Voorhies, Richard T. Wilkin 2016 Auburn University

Potential Aquifer Vulnerability In Regions Down-Gradient From Uranium In Situ Recovery (Isr) Sites, James A. Saunders, Bruce E. Pivetz, Nathan Voorhies, Richard T. Wilkin

United States Environmental Protection Agency: Publications

Sandstone-hosted roll-front uranium ore deposits originate when U(VI) dissolved in groundwater is reduced and precipitated as insoluble U(IV) minerals. Groundwater redox geochemistry, aqueous complexation, and solute migration are important in leaching uranium from source rocks and transporting it in low concentrations to a chemical redox interface where it is deposited in an ore zone typically containing the uranium minerals uraninite, pitchblende, and/or coffinite; various iron sulfides; native selenium; clays; and calcite. In situ recovery (ISR) of uranium ores is a process of contacting the uranium mineral deposit with leaching and oxidizing (lixiviant) fluids via injection of the lixiviant into wells …


Identification Of Putative Geographically Isolated Wetlands Of The Conterminous United States, Charles R. Lane, Ellen D'Amico 2016 U.S. Environmental Protection Agency

Identification Of Putative Geographically Isolated Wetlands Of The Conterminous United States, Charles R. Lane, Ellen D'Amico

United States Environmental Protection Agency: Publications

Geographically isolated wetlands (GIWs) are wetlands completely surrounded by uplands. While common throughout the United States (U.S.), there have heretofore been no nationally available, spatially explicit estimates of GIW extent, complicating efforts to understand the myriad biogeochemical, hydrological, and habitat functions of GIWs and hampering conservation and management efforts at local, state, and national scales. We used a 10-m geospatial buffer as a proxy for hydrological or ecological connectivity of National Wetlands Inventory palustrine and lacustrine wetland systems to nationally mapped and available stream, river, and lake data. We identified over 8.3 million putative GIWs across the conterminous U.S., encompassing …


Water Consumption Estimates Of The Biodiesel Process In The Us, Qingshi Tu, Mingming Lu, Y. Jeffrey Yang, Don Scott 2016 University of Cincinnati

Water Consumption Estimates Of The Biodiesel Process In The Us, Qingshi Tu, Mingming Lu, Y. Jeffrey Yang, Don Scott

United States Environmental Protection Agency: Publications

As a renewable alternative to petroleum diesel, biodiesel has been widely used in the US and the world. However, its potential impact on water resources has not been much evaluated. This study investigates water consumption from the biodiesel process, which includes three stages: soybean irrigation, soybean-to-soybean oil processing, and biodiesel manufacturing, at both national and state levels. Mass-based allocation is performed and water consumption at the three stages is obtained on the basis of million gallons per year and gallon water per gallon biodiesel (gal/gal). The normalized water consumption (water intensity) of the irrigation, oil processing, and biodiesel production stages …


Quantitative Structure–Mesothelioma Potency Model Optimization For Complex Mixtures Of Elongated Particles In Rat Pleura: A Retrospective Study, Philip M. Cook, Joseph Swintek, Timothy D. Dawson, David Chapman, Mathew A. Etterson, Dale Hoff 2016 U.S. EPA/ORD/NHEERL Mid-Continent Ecology Division

Quantitative Structure–Mesothelioma Potency Model Optimization For Complex Mixtures Of Elongated Particles In Rat Pleura: A Retrospective Study, Philip M. Cook, Joseph Swintek, Timothy D. Dawson, David Chapman, Mathew A. Etterson, Dale Hoff

United States Environmental Protection Agency: Publications

Cancer potencies of mineral and synthetic elongated particle mixtures, including asbestos fibers, are influenced by changes in fiber dose composition, bioavailability, and biodurability in combination with relevant cytotoxic dose-response relationships. An extensive rat intrapleural dose characterization data set with a wide variety of elongated particles physicochemical properties facilitated statistical analyses of pleural mesothelioma response data combined from several studies for evaluation of alternative dose-response models. Utilizing logistic regression of individual elongated particle dimensional variations within each test sample, four major findings emerged: (1) Mild acid leaching provides superior prediction of tumor incidence compared to samples that were not leached; (2) …


Quantitative Structure–Mesothelioma Potency Model Optimization For Complex Mixtures Of Elongated Particles In Rat Pleura: A Retrospective Study, Philip M. Cook, Joseph Swintek, Timothy D. Dawson, David Chapman, Mathew A. Etterson, Dale Hoff 2016 U.S. EPA/ORD/NHEERL Mid-Continent Ecology Division

Quantitative Structure–Mesothelioma Potency Model Optimization For Complex Mixtures Of Elongated Particles In Rat Pleura: A Retrospective Study, Philip M. Cook, Joseph Swintek, Timothy D. Dawson, David Chapman, Mathew A. Etterson, Dale Hoff

United States Environmental Protection Agency: Publications

Cancer potencies of mineral and synthetic elongated particle mixtures, including asbestos fibers, are influenced by changes in fiber dose composition, bioavailability, and biodurability in combination with relevant cytotoxic dose-response relationships. An extensive rat intrapleural dose characterization data set with a wide variety of elongated particles physicochemical properties facilitated statistical analyses of pleural mesothelioma response data combined from several studies for evaluation of alternative dose-response models. Utilizing logistic regression of individual elongated particle dimensional variations within each test sample, four major findings emerged: (1) Mild acid leaching provides superior prediction of tumor incidence compared to samples that were not leached; (2) …


Gross And Microscopic Lesions In Corals From Micronesia, T. M. Work, G. S. Aeby, K. A. Hughen 2016 US Geological Survey

Gross And Microscopic Lesions In Corals From Micronesia, T. M. Work, G. S. Aeby, K. A. Hughen

United States Geological Survey: Staff Publications

The authors documented gross and microscopic morphology of lesions in corals on 7 islands spanning western, southern, and eastern Micronesia, sampling 76 colonies comprising 30 species of corals among 18 genera, with Acropora, Porites, and Montipora dominating. Tissue loss comprised the majority of gross lesions sampled (41%), followed by discoloration (30%) and growth anomaly (29%). Of 31 cases of tissue loss, most lesions were subacute (48%), followed by acute and chronic (26% each). Of 23 samples with discoloration, most were dark discoloration (40%), with bleaching and other discoloration each constituting 30%. Of 22 growth anomalies, umbonate growth anomalies composed …


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