Natural Resources and Conservation Commons^™

Relative Density And Resource Selection Of Urban Red Foxes In Lincoln, Nebraska, Kyle Dougherty

School of Natural Resources: Dissertations, Theses, and Student Research

Since early reports of urban red fox (Vulpes vulpes) populations in Great Britain, red fox populations have been studied in many large cities throughout Europe, North America, and Australia. However, there has been relatively little research conducted in moderately sized North American cities. To further the ecological understanding of red foxes in moderately sized cities, we investigated relative density and resource selection of the urban fox population in Lincoln, Nebraska. We used presence-only data collected from a citizen science project and inhomogeneous point process models to investigate relative density of urban foxes and deployed GPS collars on ten red …

Investigation Of Grace-Derived Information On Forest Drought Stress Across The Contiguous Us, Beichen Zhang

School of Natural Resources: Dissertations, Theses, and Student Research

This research derives z-score monthly groundwater storage (GWS) anomalies and z-score monthly root zone soil moisture (RZSM) anomalies from products of Gravity Recovery and Climate Experiment Data Assimilation (GRACE-DA). Z-score monthly GWS and RZSM anomalies are compared to two drought indicators: Standardized Precipitation Index (SPI) and Standardized Precipitation-Evapotranspiration Index (SPEI) to investigate the usefulness of GRACE-DA information to detect drought conditions at tree-ring sites. This study also compares z-score monthly GWS and RZSM anomalies with the Tree Ring Standardized Growth Index (TRSGI) that is resampled by bootstrapping to investigate the capability of monitoring forest drought stress. Finally, this research uses …

Not All Surveillance Data Are Created Equal—A Multi‐Method Dynamic Occupancy Approach To Determine Rabies Elimination From Wildlife, Amy J. Davis, Jordona D. Kirby, Richard B. Chipman, Kathleen M. Nelson, Tatiana Xifara, Colleen T. Webb, Ryan Wallace, Amy T. Gilbert, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

1. A necessary component of elimination programmes for wildlife disease is effective surveillance. The ability to distinguish between disease freedom and non‐detection can mean the difference between a successful elimination campaign and new epizootics. Understanding the contribution of different surveillance methods helps to optimize and better allocate effort and develop more effective surveillance programmes.

2. We evaluated the probability of rabies virus elimination (disease freedom) in an enzootic area with active management using dynamic occupancy modelling of 10 years of raccoon rabies virus (RABV) surveillance data (2006–2015) collected from three states in the eastern United States. We estimated detection probability …

Rare, Threatened And Endangered Species Of Oregon (2019), Jimmy Kagan, Sue Vrilakas, Eleanor P. Gaines, Lindsey K. Wise, Michael Russell, Cayla Sigrah

Institute for Natural Resources Publications

The Oregon Biodiversity Information Center (ORBIC) is part of the Institute for Natural Resources (INR) located at Portland State University (PSU). ORBIC maintains extensive databases of Oregon biodiversity, concentrating on rare and endangered plants, animals and ecosystems. Since its creation in 1979 as the Oregon Natural Heritage Program, ORBIC has been part of the Natural Heritage network. ORBIC is a constituent member of NatureServe, a non-profit organization with a mission to provide the scientific basis for effective conservation action. NatureServe and Oregon manage data using standards and protocols used across the U.S., Canada, and much of Latin America.

ORBIC has …

Survival, Fidelity, And Dispersal Of Double-Crested Cormorants On Two Lake Michigan Islands, Christopher R. Ayers, Katie C. Hanson-Dorr, Ken Stromborg, Todd W. Arnold, Jacob S. Ivan, Brian S. Dorr

United States Department of Agriculture Wildlife Services: Staff Publications

Colony fidelity and dispersal can have important consequences on the population dynamics of colonial-nesting birds. We studied survival and inter-colony movements of Double-crested Cormorants (Phalacrocorax auritus; cormorants) nesting at Spider and Pilot islands, located 9 km apart in western Lake Michigan, during 2008–2014. We used live resighting and dead recovery data from both colonies, plus dead recoveries from throughout North America, in a multistate live and dead encounter model to estimate annual survival, inter-colony movements, plus temporary and permanent emigration to unmonitored sites. Annual survival averaged 0.37 (annual process variation, ˆ = 0.07) for hatch-year, 0.78 (ˆ= 0.08) for secondyear, …

The Long Winter Of 1880-1881, Barbara Mayes Boustead, Martha Shulski, Steven D. Hilberg

School of Natural Resources: Faculty Publications

The story of the winter of 1880-1881 in the central United States has been retold in historical fiction, including Laura Ingalls Wilder’s The Long Winter, as well as in local histories and folklore. What story does the meteorological data tell, and how does it measure up when compared to the fiction and folklore? What were the contributing factors to the severity of the Long Winter, and has it been or could it be repeated? Examining historical and meteorological data, reconstructions, and reanalysis, including the Accumulated Winter Season Severity Index, the Long Winter emerges as one of the most severe since …

Use Of Unmanned Aircraft Systems (Uas) And Multispectral Imagery For Quantifying Agricultural Areas Damaged By Wild Pigs, Justin W. Fischer, Kelsey Greiner, Mark W. Lutman, Bryson L. Webber, Kurt C. Vercauteren

United States Department of Agriculture Wildlife Services: Staff Publications

Wild pigs (Sus scrofa) cause extensive damage to agricultural crops, resulting in lost production and income. A major challenge associated with assessing damage to crops is locating and quantifying damaged areas within agricultural fields. We evaluated a novel method using multispectral high-resolution aerial imagery, collected from sensors mounted on unmanned aircraft systems (UAS), and feature extraction techniques to detect and map areas of corn fields damaged by wild pigs in southern Missouri, USA. Damaged areas were extracted from orthomosaics using visible and near-infrared band combinations, an object-based classification approach, and hierarchical learning cycles. To validate estimates we also collected ground …

Confronting Models With Data: The Challenges Of Estimating Disease Spillover, Paul C. Cross, Diann J. Prosser, Andrew M. Ramey, Ephraim M. Hanks, Kim M. Pepin

United States Department of Agriculture Wildlife Services: Staff Publications

For pathogens known to transmit across host species, strategic investment in disease control requires knowledge about where and when spillover transmission is likely. One approach to estimating spillover is to directly correlate observed spillover events with covariates. An alternative is to mechanistically combine information on host density, distribution and pathogen prevalence to predict where and when spillover events are expected to occur. We use several case studies at the wildlife–livestock disease interface to highlight the challenges, and potential solutions, to estimating spatiotemporal variation in spillover risk. Datasets on multiple host species often do not align in space, time or resolution, …

Landscape Edges Shape Dispersal And Population Structure Of A Migratory Fish, Mark A. Kaemingk, S. E. Swearer, S. J. Bury, J. S. Shima

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

Many freshwater organisms have a life-history stage that can disperse through seawater. This has obvious benefits for colonization and connectivity of fragmented sub-populations, but requires a physiologically challenging migration across a salinity boundary. We consider the role of landscape boundaries between freshwater and seawater habitats, and evaluate their potential effects on traits and developmental histories of larvae and juveniles (i.e., dispersing life-history stages) of an amphidromous fish, Galaxias maculatus. We sampled juvenile fish on their return to 20 rivers in New Zealand: 10 rivers had abrupt transitions to the sea (i.e., emptying to an open coastline); these were paired …

Typha (Cattail) Invasion In North American Wetlands: Biology, Regional Problems, Impacts, Ecosystem Services, And Management, Sheel Bansal, Shane C. Lishawa, Sue Newman, Brian A. Tangen, Douglas Wilcox, Dennis Albert, Michael J. Anteau, Michael J. Chimney, Ryann L. Cressey, Edward Dekeyser, Kenneth J. Elgersma, Sarah A. Finkelstein, Joanna Freeland, Richard Grosshans, Page E. Klug, Daniel J. Larkin, Beth A. Lawrence, George Linz, Joy Marburger, Gregory Noe, Clint Otto, Nicholas Reo, Jennifer Richards, Curtis Richardson, Leroy Rodgers, Amy J. Schrank, Dan Svedarsky, Steven Travis, Nancy Tuchman, Lisamarie Windham-Myers

United States Department of Agriculture Wildlife Services: Staff Publications

Typha is an iconic wetland plant found worldwide. Hybridization and anthropogenic disturbances have resulted in large increases in Typha abundance in wetland ecosystems throughout North America at a cost to native floral and faunal biodiversity. As demonstrated by three regional case studies, Typha is capable of rapidly colonizing habitats and forming monodominant vegetation stands due to traits such as robust size, rapid growth rate, and rhizomatic expansion. Increased nutrient inputs into wetlands and altered hydrologic regimes are among the principal anthropogenic drivers of Typha invasion. Typha is associated with a wide range of negative ecological impacts to wetland and agricultural …

Sensitivity Analysis Of Aquifer Parameter Estimations Based On The Laplace Equation With Linearized Boundary Conditions, Jozsef Szilagyi

School of Natural Resources: Faculty Publications

No abstract provided.

Automated Bioacoustics: Methods In Ecology And Conservation And Their Potential For Animal Welfare Monitoring, Michael P. Mcloughlin, Rebecca Stewart, Alan G. Mcelligott

Conservation Biology and Animal Welfare Collection

Vocalizations carry emotional, physiological and individual information. This suggests that they may serve as potentially useful indicators for inferring animal welfare. At the same time, automated methods for analysing and classifying sound have developed rapidly, particularly in the fields of ecology, conservation and sound scene classification. These methods are already used to automatically classify animal vocalizations, for example, in identifying animal species and estimating numbers of individuals. Despite this potential, they have not yet found widespread application in animal welfare monitoring. In this review, we first discuss current trends in sound analysis for ecology, conservation and sound classification. Following this, …

Cogongrass (Imperata Cylindrica (L.) Beauv.) In Louisiana: Cause And Consequence, Lorissa A. Radunzel-Davis

LSU Master's Theses

Cogongrass (Imperata cylindrica (L.) Beauv.), an invasive species from East Asia, is found worldwide and is problematic in several countries. In the United States, it grows primarily in the Southeast, reducing biodiversity by growing in dense patches and potentially causing mortality and reducing value of native and planted pinelands due to a high burning temperature. Using Lee Memorial Forest, a Louisiana State University AgCenter property in Washington Parish as a study site, this thesis explores cogongrass in Louisiana with emphasis on soil microbes and soil legacy effects on native plant species. Cogongrass populations at Lee Memorial Forest were more …

A Crash In The Night, Mary Ann Steiner, Sam Taylor, Judy Diamond

Zea E-Books Collection

The illustrations in this book describe a wildlife encounter. Wild animals, like people, have challenges in life. They are adaptable and inventive, and they find new ways of solving problems to help them survive. As you turn the pages, describe what you see. How would you solve this wildlife challenge?

Mary Ann Steiner: Working on this story was exciting to me because I believe at any age, we can notice what is happening around us and make decisions to protect and enjoy nature! In this story, the kids see an exciting new character in the community. Once they figure out …

Species Determination Of Ulvoid Algae Through Genotyping; What Are The Environmental Implications?, Kora S. Krumm

Honors Projects

Ulva is a genus of marine green algae native to many of the world’s coastlines and is especially difficult to identify via traditional methods such as dichotomous keying. This project aims to streamline taxonomic classification of Ulva species through DNA sequence analysis. Local samples of Ulva were obtained from Puget Sound, Seattle, WA, and two target genes (rbcL and its1) were amplified via PCR and sequenced for comparative analysis between samples. Ulvoids have a detrimental impact on marine ecosystems in the Pacific Northwest due to their role in eutrophication-caused algal blooms, and reliable identification can help inform conservation …

Extreme Site Fidelity As An Optimal Strategy In An Unpredictable And Homogeneous Environment, Brian D. Gerber, Mevin B. Hooten, Christopher P. Peck, Mindy B. Rice, James H. Gammonley, Anthony D. Apa, Amy J. Davis

United States Department of Agriculture Wildlife Services: Staff Publications

1. Animal site fidelity structures space use, population demography and ultimately gene flow. Understanding the adaptive selection for site fidelity patterns provides a mechanistic understanding to both spatial and population processes. This can be achieved by linking space use with environmental variability (spatial and temporal) and demographic parameters. However, rarely is the environmental context that drives the selection for site fidelity behaviour fully considered.

2. We use ecological theory to understand whether the spatial and temporal variability in breeding site quality can explain the site fidelity behaviour and demographic patterns of Gunnison sage‐grouse (Centrocercus minimus). We examined female site fidelity …

Aquatic Invasive Species Change Ecosystem Services From The World's Largest Wild Sockeye Salmon Fisheries In Alaska, Tobias Schwoerer, Joseph M. Little, Milo D. Adkison

Journal of Ocean and Coastal Economics

This study combines a multi-method approach to structured expert judgment with market valuation to forecast fisheries damages from introduced invasive species. The method is applied to a case study of Alaska’s first submersed aquatic invasive plant, Elodea spp., threatening Alaska’s salmon fisheries. Assuming that Elodea spp. remains unmanaged, estimated mean damages to commercial sockeye fisheries aggregated across Alaska amount to a potential $159 million annually with a 5% chance of exceeding $577 million annually ($2015 USD). The associated mean loss of natural capital amounts to $5.1 billion cumulatively over the next 100 years reaching $400 million after 10 years. …

Reproductive Parameters And Methodologies For The Culture Of Golden Topminnows (Fundulus Chrysotus) And Bluenose Shiners (Pteronotropis Welaka), Jacob A. Fetterman

LSU Master's Theses

The global ornamental fish trade has expanded over the past 20 years, requiring captive rearing methods to be improved or developed for species of interest. Aquaculture of desirable species is preferable over wild harvest to conserve natural habitats and biodiversity. This thesis focused on improving culture methods for Golden Topminnows Fundulus chrysotus and developing culture methods for Bluenose Shiners Pteronotropis welaka, both native fishes of the southeastern United States with ornamental demand. A combination of reproductive metric analyses, examination of historical collections, and captive spawning trials were employed to target specific objectives for each species. In female Golden Topminnows, …

Quantitative Modelling Biology Undergraduate Assessment, Robert Mayes, Kent Rittschof, Joseph Dauer, Bryon Gallant

School of Natural Resources: Faculty Publications

The Quantitative Modelling Biology Undergraduate Assessment (QM BUGS Version II) assesses undergraduate biology students’ quantitative modelling abilities and confidence. The assessment is intended to be given in undergraduate biology courses where instructors are engaging students in quantitative modelling within biological contexts. The assessment consists of 36 questions: 25 multiple choice questions addressing four subcategories within quantitative modelling understanding (Quantitative Act, Quantitative Interpretation, Quantitative Modelling, and Meta-Modelling) and 11 Likert questions addressing student confidence about modelling in biology within the four subcategories. QM BUGS assessments were piloted in multiple undergraduate biology courses at both a research intensive university and regional university …

Extinction Vortex Dynamics Of Top Predators Isolated By Urbanization, John F. Benson, Peter J. Mahoney, T. Winston Vickers, Jeff A. Sikich, Paul Beier, Seth P.D. Riley, Holly B. Ernest, Walter M. Boyce

School of Natural Resources: Faculty Publications

Extinction risk is elevated in small, isolated populations due to demographic and genetic interactions. Therefore, it is critical to model these processes realistically in population viability analyses (PVA) to inform local management and contribute to a greater understanding of mechanisms within the extinction vortex. We conducted PVA’s for two small mountain lion populations isolated by urbanization in southern California to predict population growth, extinction probability, and loss of genetic diversity with empirical data. Specifically, we (1) provide the first PVA for isolated mountain lions in the Santa Ana Mountains (SAM) that considers both demographic and genetic risk factors and (2) …