Integrative Biology Commons^™

Adventures In Time And Space: What Shapes Behavioural Decisions In Drosophila Melanogaster?, Heather Malek, Tristan Af Long Dr.

Theses and Dissertations (Comprehensive)

Variation in behaviour can be observed both between individuals, based on their condition and experience as well as between populations due to sources of heterogeneity in the environment. These behavioural differences have evolved as a result of natural and sexual selection where different strategies may be favoured depending on the costs and benefits associated with those behaviours. In this thesis I examine two sources of heterogeneity within the environment and their behavioural consequences: how spatial complexity mediates sexual selection over time, and how inter and intraspecific signals and individual condition influence social oviposition behaviour. By increasing spatial complexity, we were …

Characterization Of Wssf; A Putative Acetyltransferase From Achromobacter Insuavis And Pseudomonas Fluorescens, Cody Reese

Theses and Dissertations (Comprehensive)

Biofilms are a survival mechanism commonly employed by communities of bacteria for adherence and protection. Bacteria produce a matrix of polymers (e.g. exopolysaccharides, such as cellulose) that allow them to exert control on their local environment. In the case of cellulose biofilms, acetylation (addition of acetate on carbohydrates) is paramount for polymer integrity and in some cases virulence. For this research, the wrinkly spreader (WS) genotype of the emergent human pathogen Achromobacter insuavis facilitates infections of the eyes of contact lens wearers and the lungs of Cystic Fibrosis patients (CF). Chronic infections have created a growing concern for the protective …

The Impacts Of Gold Mining On Vegetation And Mycorrhizal Colonization In Northern Canada, Sarah Mediouni

Theses and Dissertations (Comprehensive)

Gold mining is an important part of economic development in Northern Canada. A large portion of the gold that is found in the North is contained within arsenopyrite ores, therefore, arsenic contamination is of special concern. Little is known regarding the impacts of arsenic on plants and mycorrhizae in Northern Ecosystems. Arsenic has been shown to negatively impact plant growth and seed germination in some temperate species, while others are tolerant and can accumulate arsenic concentrations over 1000 mg/kg. In temperate regions, arbuscular mycorrhiza can accelerate the remediation process in gold mines by supporting plant growth in poor soil conditions …

Dispersal As A Buffer Against Zooplankton Community Change In Response To Fluctuating Salinity Levels On The Great Plains, Mercedes Huynh

Theses and Dissertations (Comprehensive)

The North American Great Plains is home to thousands of closed-basin lakes that are sensitive to changes in hydrology. Climate change models predict increased aridity in this region over the coming century, which is expected to lead to higher salinity levels in many freshwater lakes. Increases in salinity levels may impact zooplankton communities, as laboratory experiments show that many freshwater species have a low tolerance for elevated salinity levels, and field data demonstrate that salinity is the primary factor structuring aquatic communities on the Great Plains. Changes to zooplankton communities could lead to a trophic cascade based on their important …

Happy Or Hangry Families: Does Kinship Mediate Cooperation And Cannibalism In Drosophila Melanogaster Larvae?, Lucas Khodaei

Theses and Dissertations (Comprehensive)

The fruit fly Drosophila melanogaster has a long history as a research model for studies on behaviour and group dynamics. When individuals are grouped in an environment and resources decrease, then they may behave co-operatively with one another or antagonistically compete. Hamilton’s Law states that if the benefit of helping a related individual out-weighs the cost to its direct fitness, then the individual’s indirect fitness will increase when they help their kin compared to helping an unrelated stranger. Yet it is unknown whether kinship mediates larval behaviour to encourage co-operation and/or lessen antagonistic behaviours between consanguineous individuals. In this thesis …

Diversity And Evolution Of Seeds In Cuscuta (Dodders, Convolvulaceae): Morphology And Structure, Magdalena Olszewski

Theses and Dissertations (Comprehensive)

Cuscuta is a genus of nearly 200 obligate stem parasites with a nearly cosmopolitan distribution and considerable agricultural and ecological significance. Dodder seeds are considered “unspecialized”, with no morphological adaptations towards particular dispersal vectors; however, the seed coat anatomy has recently suggested an adaptation to endozoochory. This is the first attempt to provide a genus-wide overview of the diversity in morphology and anatomy of Cuscuta seeds, together with an assessment of the water gap and exploration of various form-function relationships. I surveyed 104 species belonging to all four Cuscuta subgenera. Seeds of the species of the first infrageneric dodder …

Context Is Everything: An Investigation Of Spanish River Carbonatite And Its Effects On Soil-Plant-Microorganism Systems, James Mc Jones

Theses and Dissertations (Comprehensive)

With growing concerns about agricultural sustainability and food security, the use of rock fertilizers and agrominerals is receiving renewed interest. A wide variety of geological resources have been proposed as crop nutrient sources, with silicate rocks the predominant focus. Carbonatite rocks are known to weather more readily than silicate rocks; yet, they have received relatively little attention as it is thought their high Ca and Mg contents hinder effective nutrient release. However, there is strong evidence that the nutrients within carbonatite rocks are easily accessible to plants, and that these rocks have noticable effects on crop plant growth. Here I …

Competition Or Facilitation: Examination Of Interactions Between Endangered Sida Hermaphrodita And Invasive Phragmites Australis, Samantha N. Mulholland

Theses and Dissertations (Comprehensive)

Virginia Mallow (Sida hermaphrodita) is a perennial herb of the Malvaceae family that is native to riparian habitats in northeastern North America. Throughout most of its geographical distribution however, it is considered threatened and only two populations are known from Canada. The biology and ecology of S. hermaphrodita are still poorly understood and although few studies have been performed to determine the factors that contribute to the species rarity, it is considered threatened potentially due to the loss of habitat caused by exotic European Common reed (Phragmites australis subsp. australis) invasion. Allelopathic and phytotoxic conditioning of …

Investigating The Antiviral Effects Of Vig-3 From Rainbow Trout, Shanee Herrington-Krause

Theses and Dissertations (Comprehensive)

Rainbow trout is the most farmed fish in Ontario, and thus is economically important to the province. Despite this, there is a lack of understanding regarding fish innate immunity, specifically with regards to interferon-stimulated genes (ISGs) and their antiviral effector functions. ISGs are the workhorses of the innate antiviral response, operating together to limit each step of virus replication. The Viral Hemorrhagic Septicemia Virus (VHSV) induced gene (Vig)-3 is a newly identified ISG within many fish species and is homologous to ISG-15 in mammals. It is a small ubiquitin-like protein inducible by type I interferon (IFN-I), and is suggested to …

Effects Of Climate Variability: A Long-Term Perspective On Leaf Litter Processing In The Ogeechee River, Jose A. Sanchez

College of Graduate Studies: Theses & Dissertations

The Intergovernmental Panel for Climate Change (IPCC) predicts a rise in temperatures and changes to precipitation patterns for the 21^st century. These changes are expected to lead to a higher frequency of extreme events such as drought and floods which lead to the alteration of the hydrology, communities, and processes of freshwater ecosystems. Leaf litter decomposition in stream ecosystems is an important component of the energy and nutrient cycle representing a food source for aquatic organisms. This has made it a tool for assessing long term responses to disturbance due to changes in the assemblage of macroinvertebrates that …

Population Health Of Spotted Salamanders (Ambystoma Maculatum) In Created Vernal Pools: An Integrative Approach, Alice R. Millikin

Graduate Theses, Dissertations, and Problem Reports (ETD)

Habitat creation is an important tool for conservation to counteract habitat loss and degradation. Vernal pools are susceptible to destruction due to limited detection, protection, and regulation. These wetlands provide fishless breeding habitat for many amphibian species including spotted salamanders (Ambystoma maculatum) in eastern North America. Determining whether created vernal pool habitat is successful is often determined by demographic data of colonizing populations. I suggest that hormone levels, population genetics, and disease prevalence can improve our understanding of population health in created habitat. The goal of this dissertation was to assess the health of spotted salamander larvae in …

Life History Of The Coastal Tailed Frog (Ascaphus Truei) Across An Elevational Gradient, Adrian Daniel Macedo

Cal Poly Humboldt theses and projects

The life history of a species is described in terms of its growth, longevity, and reproduction. Unsurprisingly, life history traits are known to vary in many taxa across environmental gradients. In the case of amphibians, species at high elevations and latitudes tend to have shorter breeding seasons, shorter activity periods, longer larval periods, reach sexual maturity at older ages, and produce fewer and larger clutches per year.

The Coastal Tailed Frog (Ascaphus truei) is an ideal species for the study of geographic variation in life history because it ranges across most of the Pacific Northwest from northern California …

Understanding The Impacts Of Current And Future Environmental Variation On Central African Amphibian Biodiversity, Courtney A. Miller

LSU New Orleans Theses and Dissertations

Global climate change is projected to impact multiple levels of biodiversity by imposing strong selection pressures on existing populations, triggering shifts in species distributions, and reorganizing entire communities. The Lower Guineo-Congolian region in central Africa, a reservoir for amphibian diversity, is predicted to be severely affected by future climate change through rising temperatures and greater variability in rainfall. Geospatial modelling can be used to assess how environmental variation shapes patterns of biological variation – from the genomic to the community level – and use these associations to predict patterns of biological change across space and time. The overall goal of …

Reproductive Life History And Shell Shape Variation Of Three Species Of Elimia (Pleuroceridae) In The Lower Etowah River Basin, Ellen Winant

Master of Science in Integrative Biology Theses

Pleurocerid snail diversity in the Southeastern United States is thought to be high, but estimates of overall diversity are compromised by uncertain taxonomy. This is particularly true for the genus Elimia, where reliance on conchological characters described by early naturalists for species designation failed to recognize significant variability in shell morphology. In this study we examine three putative species of Elimia to determine if quantifiable conchological characters are associated with differences in life history characteristics. Individuals of E. modesta, E. carinocostata, and E. cariniferawere collected from nine sites in three streams in the lower Etowah River …

Relationships Between Microbial Indicators And Pathogens In Recreational Water Settings, Asja Korajkic, Brian R. Mcminn, Valerie J. Harwood

Integrative Biology Faculty and Staff Publications

Fecal pollution of recreational waters can cause scenic blight and pose a threat to public health, resulting in beach advisories and closures. Fecal indicator bacteria (total and fecal coliforms, Escherichia coli, and enterococci), and alternative indicators of fecal pollution (Clostridium perfringens and bacteriophages) are routinely used in the assessment of sanitary quality of recreational waters. However, fecal indicator bacteria (FIB), and alternative indicators are found in the gastrointestinal tract of humans, and many other animals and therefore are considered general indicators of fecal pollution. As such, there is room for improvement in terms of their use for informing risk assessment …

Cold Acclimation Response Of Non-Native Italian Wall Lizard (Podarcis Siculus) Populations From New York And California, Daniel Haro

Master's Theses

Understanding how organisms respond to climatic variability and novel conditions is becoming an increasingly important task for ecologists. For ectotherms in the northern hemisphere, the response to cold is of special interest, considering that poleward range expansion events and increasing variability of temperatures during winter are already being observed as consequences of a warming planet. Though direction of change in physiological variables in response to cold is well studied in ectotherms, the extent to which traits can change and the rate at which they can change is not.

We compared the extent and rate of change in cold tolerance (CT …

Aspects Of The Reproductive Biology And Growth Of The Mississippi Silvery Minnow, Hybognathus Nuchalis (Agassiz, 1855) (Teleostei: Cyprinidae) From The Pearl River, Louisiana., Arely Ramírez-García, Kyle R. Piller

Southeastern Fishes Council Proceedings

The reproductive biology and growth of the Mississippi Silvery Minnow, Hybognathus nuchalis, is described from multiple sites in the Pearl River, Louisiana. Individuals were collected from August 2011 to August 2012. Ovarian weights, expressed as a percentage of body weights, peaked in December. Size structure ranged from 29.0 to 60.0 mm SL for females and 25.0 to 56.0 mm SL for males. Mature ova were found from November to January. Females reached first maturity (L50) at 37.0 mm SL and L50 for males is at 41.0 mm SL. Sex ratio (females:males) is biased towards females (X²= 18.57 p …

Imass Time: The Future, In Future!, Qingwei Ma, Eric Adua, Mary C. Boyce, Xingang Li, Guang Ji, Wei Wang

Research outputs 2014 to 2021

Joseph John Thomson discovered and proved the existence of electrons through a series of experiments. His work earned him a Nobel Prize in 1906 and initiated the era of mass spectrometry (MS). In the intervening time, other researchers have also been awarded the Nobel Prize for significant advances in MS technology. The development of soft ionization techniques was central to the application of MS to large biological molecules and led to an unprecedented interest in the study of biomolecules such as proteins (proteomics), metabolites (metabolomics), carbohydrates (glycomics), and lipids (lipidomics), allowing a better understanding of the molecular underpinnings of health …

Estimating The Elimination Feasibility In The 'End Game' Of Control Efforts For Parasites Subjected To Regular Mass Drug Administration: Methods And Their Application To Schistosomiasis, Arathi Arakala, Christopher M. Hoover, John M. Marshall, Susanne H. Sokolow, Guilio A. De Leo, Jason R. Rohr, Justin V. Remais, Manoj Gambhir

Integrative Biology Faculty and Staff Publications

Progress towards controlling and eliminating parasitic worms, including schistosomiasis, onchocerciasis, and lymphatic filariasis, is advancing rapidly as national governments, multinational NGOs, and pharmaceutical companies launch collaborative chemotherapeutic control campaigns. Critical questions remain regarding the potential for achieving elimination of these infections, and analytical methods can help to quickly estimate progress towards—and the probability of achieving—elimination over specific timeframes. Here, we propose the effective reproduction number, R_eff, as a proxy of elimination potential for sexually reproducing worms that are subject to poor mating success at very low abundance (positive density dependence, or Allee effects). R_eff is the …

Proposed Interventions For The Containment Of Influenza In Boarding Schools And Small Colleges, Alexis Vittengl

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.