Atomic, Molecular and Optical Physics Commons^™

Modeling Kinetics Of 5-Aminolevulinic Acid-Induced Protoporphyrin Ix Accumulation For Optimal Photodynamic Therapy, Priscilla Melebor

Graduate Masters Theses

Photodynamic therapy (PDT) is a minimally invasive treatment that uses light-activated photosensitizers to selectively destroy diseased tissue through the generation of reactive oxygen species. However, conventional in vitro models often fail to accurately reproduce the pharmacokinetics of photosensitizer accumulation and clearance observed in vivo. This study investigated protoporphyrin IX (PpIX) accumulation following 5-aminolevulinic acid (ALA) exposure under physiologically relevant conditions using two-dimensional (2D) monolayers and three-dimensional (3D) spheroids. By comparing continuous ALA exposure with transient exposure followed by ALA washout, this work provides a more biologically relevant framework for studying PpIX kinetics and optimizing photodynamic therapy.

Synthesizing Viscoelasticity: Living Polymers, Micro-Macro Relations, And Paths For Resolution, Adam M. Hasler

Graduate Masters Theses

This thesis investigates the relationship between macroscopic rheological signals and underlying microscopic dynamics in complex fluids, specifically focusing on ”living polymers” within the cetyltrimethylammonium bromide (CTAB) and sodium salicylate (NaSal) surfactant system. The research addresses the inverse parameterization problem, demonstrating how bulk measurements like zero-shear viscosity can mask fundamentally different physical topologies, such as purely cylindrical, reptating micelles versus highly branched networks. Through the successful synthesis of viscoelastically ”degenerate” samples, the study utilizes an array of characterization techniques including frequency sweeps, Large Amplitude Oscillatory Shear (LAOS) to resolve these unique underlying states. Furthermore, the work explores further avenues of study …

Fabrication Of Objectives For Imaging Ultracold Lithium, Danelle Akanova

Dartmouth College Master’s Theses

This thesis develops a documented, reproducible procedure for building diffraction-limited microscope objectives entirely from catalog singlets, for imaging ultracold 6Li atoms in a ring-trap experiment. The objectives must resolve micron-scale features through a 5 mm fused-silica vacuum window, operate at multiple wavelengths, fit inside a 48 mm magnet bore, and contain no conductive or magnetic material, because the surrounding coils switch 0.1 T fields on microsecond timescales. Commercial long-working-distance objectives are universally housed in metal, which the eddy-current constraint rules out, and custom fabrication of a suitable non-conductive matched pair is estimated at nearly $200k.

The procedure is developed and …

Algorithmic Sculpting Of Complex Fused Silica Surfaces For Nondestructive, Mode-Matched Cavity Quantum Electrodynamics: Adaptive Co2 Milling And Simulation-Guided Ultrafast Inscription, From Fiber Fabry-Perot Cavities To Monolithic Architectures, Meagan E. Parker

Optical Science and Engineering ETDs

Quantum sensors achieve exceptional measurement sensitivity through coherent, well-isolated quantum systems, but practical deployment is hindered by destructive readouts that require repeated state preparation and create long system dead times. Optical cavities enable continuous, nondestructive measurements with minimal back-action, yet integrating high-finesse cavities into scalable quantum devices remains limited by existing fabrication methods. To overcome these constraints, an adaptive CO₂ laser-milling platform was developed. Guided by glass thermodynamics and melt dynamics, this closed-loop system uses in-situ phase-shifting interferometry to sculpt complex fused-silica surfaces with sub-nanometer root-mean-square roughness. The platform was validated by fabricating extended-length fiber Fabry–Pérot cavities and monolithic micro-cavity …

30 Db On-Chip Ultra-High Inverse Weak Value Amplification, Yuhan Mei, Meiting Song, Andrew N. Jordan, Jaime Cardenas

Mathematics, Physics, and Computer Science Faculty Articles and Research

Weak value amplification (WVA) has emerged as a powerful technique that enhances measurement precision. However, traditional table-top WVA setups and on-chip demonstrations have not achieved an amplification over 20 dB. The practical limit of the amplification is the fidelity of photon post-selection. To address this limit, we design a weak value device with an over 30 dB interferometer extinction ratio, where the stray light in the dark port is minimized with thermally tunable phase shifters. As a result, the device successfully shows 30 dB WVA, termed ultra-high WVA. This WVA optimization strategy by improving interferometer extinction is extensible to a …

Characterizing Stiffness Dynamics Of Normal And Malignant Breast Spheroids Using Brillouin Microscopy, Razanne Rafat Zaghloul, Karlin Hilai, Chenjun Shi, Jitao Zhang

Medical Student Research Symposium

Background: Breast cancer progression and metastasis are closely linked to alterations in the mechanical properties of tumor cells and their microenvironment. Softer, more deformable cells are often associated with higher metastatic potential. While atomic force microscopy (AFM) is the current gold standard for mechanical characterization, it is limited to surface measurements and can damage 3D cultures. It remains unclear how the mechanical properties evolve over time in normal versus malignant spheroids. This study utilizes Brillouin light-scattering microscopy, a non-contact and label-free optical technique, to assess stiffness changes in normal and malignant breast epithelial spheroids over time. Understanding these mechanical signatures …

Optical Nuclear Spin Detection In Diamond And Varifocal Metasurface Optics, Maxwell D. Aiello

Physics & Astronomy ETDs

This dissertation presents two experimental investigations at the intersection of quantum sensing and precision optical instrumentation. The primary project demonstrates optically detected nuclear magnetic resonance (NMR) of ¹³C nuclear spins in diamond, using state-selective Landau-Zener transitions under microwave frequency sweeping to bidirectionally transfer spin polarization between nitrogen-vacancy (NV) electron spins and remote ¹³C nuclear spins. This enables optical polarization and readout of large ensembles of polarized nuclear spins at low magnetic fields and room temperature, with spin dephasing times limited by longitudinal relaxation of nearby NV electron spins. The secondary project reports the design, fabrication, and characterization of …

Proposed Methodology For Correcting Fourier-Transform Infrared Spectroscopy Field-Of-View Scene-Change Artifacts, Kody A. Wilson, Michael L. Dexter, Benjamin F. Akers, Anthony L. Franz

Faculty Publications

Fourier-transform spectrometers are widely used for spectral measurements. Changes in the field of view during measurement introduce oscillations into the measured spectra known as scene-change artifacts. Field-of-view changes also introduce uncertainty about which target the measured spectrum represents. Though scene-change artifacts are often present in dynamic data, their significance is disputed in the current literature. This work presents a theoretical framework and experimental validation for scene-change artifacts. Field-of-view changes introduce variable interferogram offsets, which standard processing techniques assume are constant. The error between the interferogram offset and its estimate is Fourier-transformed, yielding scene-change artifacts, often confused with noise, in the …

Design, Fabrication Modeling, And Optical Metrology Of Mwir Silicon Metalenses, Weiyu Chen

Graduate Studies Theses and Dissertations 2026

Mid-wave infrared (MWIR) optical systems require compact, broadband, manufacturable components whose performance can be predicted and measured reliably. Silicon metalenses are attractive because silicon combines high refractive index, MWIR transparency, and semiconductor-compatible fabrication. This dissertation develops a scale-bridging design–fabrication-modeling–metrology framework for MWIR silicon metalenses.

A shared full-aperture framework connects meta-atom libraries, physical layout generation, angular-spectrum propagation, point-spread-function calculation, and focal-plane energy metrics. Building on this foundation, the Dispersive Sweatt Model (DSM) incorporates meta-atom dispersion into conventional ray-tracing software, enabling broadband co-optimization of metasurfaces and refractive elements. A process-aware design framework then incorporates scanning electron microscopy (SEM)-measured height–radius relationships produced by …

Non-Gaussian Phenomena In Light Scattering And Applications, Shubham Atul Dawda

Graduate Studies Theses and Dissertations 2026

Physical reality is rarely deterministic; which, when probed by electromagnetic fields that also fluctuate, leads to observables that are most efficiently modelled as statistical processes. At equilibrium, this is usually achieved by invoking the Gaussian statistics of underlying physical processes, however, in practice, one often encounters out-of-equilibrium conditions where Gaussian descriptions may not suffice. Such situations are plentiful in nature– from biology to astronomy. This dissertation addresses several non-Gaussian phenomena associated with light scattering, and includes specific models’ derivations, experimental techniques developments, and demonstrations of potential applications. The systematic presentation will consider circumstances that infringe upon specific assumptions of the …

Comparing The Effectiveness Of Eggshell Spectra From Laser-Induced Break-Down Spectroscopy And Near-Infrared Spectroscopy Using Principal Compo-Nent Analysis To Determine The Authenticity Of Organic Eggs, Ahmad Qusthalani, Rara Mitaphonna, Muliadi Ramli, Rajibussalim Rajibussalim, Kurnia Lahna, Nasrullah Zaini, Nasrullah Idris

Makara Journal of Science

This study aimed to explore the potential of modern spectroscopy in the authentication of organic and non-organic chicken eggs using near-infrared spectroscopy (NIRS) and laser-induced breakdown spectroscopy (LIBS) spectra. A total of 175 eggs were analyzed, which were grouped into seven categories based on the source of feed given: 100% organic, 100% non-organic, 75% organic, 75% non-organic, 50% organic, free-range chickens, and eggs obtained from the local traditional market. Each group consisted of 25 eggs. NIRS spectra were recorded in the wavelength range of 350–2500 nm, whereas LIBS spectra were recorded in the range of 200–900 nm. A total of …

Satellite-Mediated Quantum Clock Synchronization: Towards Precise Timing At A Global Scale, Sage B. Ducoing

LSU Doctoral Dissertations

Accurate timekeeping is essential for scientific and technological advancements, particularly in areas of communication, networking, navigation, and high precision measurements. While many methods of time resolution are already established using classical resources, they fail to combine high precision outcomes with large-scale implementations. Additionally, numerous quantum networking architectures using satellite-assisted methods have demonstrated quantum communication on scales exceeding ground-based methods. For these reasons, we propose the use of a time synchronization method by which pairs of highly time-correlated photons are exchanged between clocks on satellites and clocks on Earth, al- lowing users to reconstruct the time offsets between their clocks. This …

The Study Of Hybrid Nanostructures For Optoelectronics, Alex Davis, Khaoula Dehhou

Publications and Research

Hybrid nanostructures that combine zero-dimensional (0D) quantum dots (QDs) with two-dimensional (2D) transition-metal dichalcogenides (TMDs) are promising building blocks for next-generation optoelectronic devices, such as highly sensitive photodetectors, light-emitting diodes, and tunable light sources. These hybrid systems take advantage of the strong, size-dependent emission of colloidal QDs and the high carrier mobility and tunable band structure of 2D materials. In this research, we investigate hybrid structures composed of colloidal CdSe/ZnS, CuInS/ZnS, and PbS QDs integrated with indium selenide (InSe), a TMD known for its exceptional electron mobility and robust photoluminescence in few-layer form. The goal is to understand how interfacial …

Investigation Of Laser Based Flow Diagnostics With Metastable Argon, Sterling S. Gordon

Physics Theses & Dissertations

The overarching motivation of this work is the development of seedless, non-intrusive, laser-based diagnostics for supersonic airflow in wind tunnels. To advance this goal, this dissertation fo-cuses on three-photon excitation in a research-grade argon beam within a tabletop vacuum system, which offers a controlled environment for testing and refining the approach. The chosen excitation scheme drives argon atoms to the 3d[5/2]₃ state using a pulsed Ti:Sapphire laser system, enabling time-of-flight (ToF) measurements on atoms that subsequently undergo a multi-step decay to the metastable 4s[3/2]₂ state. Although full realization of this excitation scheme was hindered by technical …

Single-Molecule Orientation And Localization Microscopy, Sophie Brasselet, Matthew D. Lew

Electrical & Systems Engineering Publications and Presentations

Single-molecule localization microscopy (SMLM) offers enhanced spatial resolution in optical microscopy, providing detailed insights into the spatial organization of proteins in cells at the nanoscale. Over the past decade, SMLM has progressively incorporated the capability to retrieve the orientations of single molecules using their polarized dipolar emission pattern. Here we explore recent advancements in single-molecule orientation and localization microscopy (SMOLM), which yields super-resolved images of molecular three-dimensional (3D) orientations, wobble and 3D positions. This advancement opens possibilities to explore the nanoscale organization and conformation of biological molecules as well as to monitor and design local 3D optical fields in nanophotonics. …

Non-Linear Atom-Laser Interactions Using Rubidium Pump-Probe Spectroscopy, Grace Neil

Beyond: Undergraduate Research Journal

An experiment was performed to demonstrate the pump-probe spectroscopy of Rubidium (Rb) vapor, revealing the nonlinear atom-laser interactions in the 5S1/2 ↔ 5D5/2 transition in Rb that can be used to generate quantum entanglement between two laser beams. The setup included a tunable infrared diode laser, optical mirrors, photodiode-detectors, a beam-splitter, and a temperature- regulated rubidium gas chamber, all of which are controlled by the TeachSpin laser controller and monitor. The output from the laser-diode was split into a pump (90%) and a signal probe (10%), which intersected in counter-propagating directions inside the Rubidium chamber. The analysis shows that in …

Volumetric Imaging Of Cellular Dynamics Using Light-Sheet Microscopy: From Subcellular Structures To Whole Organisms, Md Nasful Huda Prince

Optical Science and Engineering ETDs

Advancing biomedical imaging requires platforms that combine high-resolution, speed, and stability across biological scales. This dissertation presents three innovations designed to address limitations of conventional light-sheet and oblique plane imaging. First, we introduce Reflected Inline Detection in Epi-Oblique Plane Microscopy (RIDE-OPM), a compact and drift-resistant system that eliminates a tertiary detection path while maintaining alignment flexibility, enabling robust long-term live imaging. Second, we present a high-speed Axially Swept Light-Sheet Microscopy (ASLM) platform for cleared tissues, using dual foci and synchronized sweeping to achieve isotropic sub-micron resolution at up to 40 frames-per-second, a fourfold improvement over standard ASLM. Integrated with a …

Phase Nanoscopy With Correlated Frequency Combs, Xiaobing Zhu

Optical Science and Engineering ETDs

In this dissertation a sensing method applying to any physical quantity that modifies optical phase is developed. Two pulses are produced inside a synchronously pumped Optical Parametric Oscillator, generating two identical, undistinguishable frequency combs. The physical quantity to be measured applies a small phase shift/round trip to one of the pulses, resulting in a frequency shift of the corresponding comb. The latter frequency is measured as a beat by interfering the two combs on a detector. A world record resolution, close to the quantum limit, of 0.033 nanoradian (corresponding to 0.006 fm in displacement) is achieved. A detailed analysis of …

Advancing Diamond Quantum Sensors: Isotropic Flux Concentrators And Phase Noise Mitigation, Maziar Saleh Ziabari

Optical Science and Engineering ETDs

Two methods for improving the sensitivity of nitrogen vacancy quantum sensors in diamond are explored. First, by passively concentrating the magnetic flux, three orthogonally oriented ferrite truncated cone pairs amplify the field isotropically by 19 times, allowing measurement of Earth's field without a bias field and increasing sensitivity. Through thorough analysis, modeling and tuning a novel 3-dimensional flux concentrator system, we achieve a fractional standard deviation of less than 1% anisotropy and quantify minimal deadzones and ambient temperature-limited variations below 40 nT/hour. Second, we characterize, model and calculate phase noise in NV experiments, which in NV sensors is effectively indistinguishable …

Gravity Wave Breaking Over Northern Utah With An Advanced Mesospheric Temperature Mapper And Sodium Lidar, Eric Davis

All Graduate Reports and Creative Projects, Fall 2023 to Present

Considerable progress has been made in recent decades in the understanding of gravity wave (GW) dynamics. However, there remain important aspects and effects that are poorly understood. In particular, the coupling and deposition of their energy and momentum into the mesosphere lower thermosphere (MLT) region and the interaction and instability dynamics that are directly associated with GW breaking. Using an Advanced Mesosphere Temperature Mapper (AMTM) several strong wave breaking events were observed in the summer of 2015 at USU’s BLO research station. These events have exhibited high momentum fluxes and associated strong wave breaking, prompting detailed data analyses. Rossby waves, …

Effects Of Group Delay Dispersion In Silica Glass On Non-Gaussian Laser Pulses, Lars Pedersen

Honors Program: Senior Projects (Public)

We present an analysis of how the group delay dispersion in silica glass affects the envelope of non-Gaussian laser pulses. In particular, we examine femtosecond pulses in the ultraviolet regime with cosine squared and symmetric exponential envelope shapes. For both envelope shapes, our results show a linear or semi-linear dependence of both the maximum electric field strength and duration on the group delay dispersion when the pulse passes through the silica glass medium with a thickness between 1 μm and 10 μm. This computational analysis is done using a fast Fourier transform method.

Power-Beaming: Wireless Energy Transfer Using Lasers, Spencer L. Barnett

ATU Scholars Symposium

The objective of the project is to implement a wireless energy transfer system utilizing laser technology. This system involves modulating the laser’s beam profile and spatial distribution through precise optical manipulation. The energy transmitted by the laser is captured by a photovoltaic array, commonly referred to as a solar panel, which is engineered to convert incident photons into direct current (DC) electrical power. The current challenge is to develop a reliable wireless energy transfer mechanism capable of operating over extended distances, thereby overcoming the constraints imposed by wired connections, particularly in environments where wiring is impractical, such as in space. …

Vorticies In The Nonlinear Optical Fluid, Patrick C. Ford

Electronic Theses and Dissertations

In this dissertation, we review the dynamics of the propagation of a laser through a nonlinear medium, and the dynamics of a self-interacting superfluid phase, and show a mathematical analogy between them. We identify an equivalence that allows direct comparison of the properties and dynamics of the optical fluid with those of the Bose-Einstein condensate. Next, we describe some experimental techniques and methods for data capture and analysis on the way to presenting a novel experimental apparatus that has allowed us to study non-equilibrium nonlinear vortex dynamics in the optical fluid, and that will allow more general future studies of …

Entangled Photoelectron Attosecond Spectroscopy, Jonathan Sar-Shalom

Honors Undergraduate Theses

In this thesis we propose an interferometric scheme to retrieve the dynamics of an electron wave packet emitted from two distinct residual photo-ion channels in the ionization of an atom by an ultra-short UV pulse. EPAS (Entangled-Photoelectron Attosecond Spectroscopy) works by having a non-overlapping UV and few-cycle IR pulse, where the IR is tuned near the transition frequency between two electronic bound states of the photo-ion. Using a time-dependent simulation based on a two-channel atomic model, supported by a perturbative approach, we were able to compute the resulting interference in the angular distribution of the photoelectron and retrieve the energy-dependent …

Interactions And Applications Of Optical Angular Momentum In Magneto-Optical Material, Seth R. Nelson

Dissertations, Master's Theses and Master's Reports

This dissertation explores the interactions and applications of optical angular momentum within magneto-optical materials. Beginning with a theoretical and experimental analysis of multiple reflection and refraction phenomena within magneto-optical material. We derive and verify the dependence of refractive indices on optical spin angular momentum and magneto-optical magnetization, resulting in nonreciprocal elliptical and linear polarization beam splitting effects and wavevector discretization. We fabricate a magnetless slab waveguide isolator with minimal optical loss. Extending our study to optical orbital angular momentum, we introduce a perturbation to the electronic transition model in bismuth-substituted iron garnets. We demonstrate that this perturbation leads to nonreciprocal …

Reconstructing Superoscillations Buried Deeply In Noise, Derek D. White, Shunxing Zhang, Barbara Šoda, Achim Kempf, Daniele C. Struppa, Andrew N. Jordan, John C. Howell

Mathematics, Physics, and Computer Science Faculty Articles and Research

We utilize a method using frequency combs to construct waves that feature superoscillations—local regions of the wave that exhibit a change in phase that the bandlimits of the wave should not otherwise allow. This method has been shown to create superoscillating regions that mimic any analytic function—even ones well outside the bandlimits—to an arbitrary degree of accuracy. We experimentally demonstrate that these waves are extremely robust against noise, allowing for accurate reconstruction of a superoscillating target function thoroughly buried in noise. We additionally show that such a construction can be easily used to range-resolve a signal well below the commonly …

Characterizing 2d Materials Using Positron Impact Induced Electron Spectroscopy And Development Of A Novel Thin Film Zno Based Piezo-Photonic Detector For Cryogenic And Mems Applications, Pratyanik Sau

2024 Fall Honors Capstone Projects - Archive

Surface analytical techniques are essential for engineering nano-detectors allowing characterization of their chemical composition, electromechanical properties, and physical structure. In the first chapter, the positron impact-induced secondary electron (PIISE) energy spectra and yield from single-layer graphene (SLG) and multi-layer graphene (MLG) grown on a polycrystalline Cu substrate have been presented. In the second chapter, an extensive catalog of Positron Induced Auger Spectra is presented to aid in the analysis of elemental composition of various materials. Additionally, in the third chapter, a novel detection scheme utilizing the piezo-pyroelectric properties of Zinc Oxide (ZnO) thin films have been demonstrated for its application …

A Simple And Low-Cost Method For Generating Short Laser Pulses, Daniel Fisher

Undergraduate Research Symposium Posters

A simple, portable method is described and demonstrated for generating short optical pulses (~ 1 μsec) from a continuous wave (CW) source using a rotating pinhole. A CW 633nm HeNe beam was focused onto a 225 μm diameter stainless steel pinhole, which was rotated up to 1000 Hz using an optical chopper wheel. The pulsed light was then focused onto a silicon photodetector and read by an oscilloscope. This novel setup aims to bridge the gap between pulsed laser performance and price for wide application in spectroscopy methods, industrial laser peening, and medical treatments. This will be the first publication …

Super-Resolution Magnetic Microscopy And Earth’S Field Magnetometry With Color Centers In Diamond, Nazanin Mosavian

Optical Science and Engineering ETDs

In recent years, the negatively charged nitrogen- vacancy (NV) center has emerged as a promising solid-state color center capable of measuring magnetic fields with high sensi- tivity and spatial resolution under ambient conditions. In this thesis I will discuss how we perform super resolution magnetic microscopy and acquire magnetic field images of nanoparticle samples at 100 nm resolution. I will explain how 3D flux concentrators increase magnetic field amplitude and allows us to measure vector component magnetic fields as low as 50 µT with a diamond magnetometer, without the use of an additional bias magnetic field. I also describe how …

Wavefront Sensor Based On Angle Selectivity Of An Optical Filter, Andreas Zepp, Emma Branigan, Julien Garnier, Kevin Murphy, Raphael Bellossi, Karin Stein, Szymon Gladysz

Conference Papers

The effectiveness of free-space laser communications is limited due to wavefront deformations caused by atmospheric optical turbulence. To determine these deformations, we propose a wavefront sensor that utilizes the angular selectivity of an optical transmission filter to measure the first derivative of the wavefront. The transmission filter converts the gradients of the incident wavefront into an intensity distribution. For each direction (x and y) this distribution is captured twice, with different angles between filter and optical axis for each measurement. The contrast of both measurements (calculated for each pixel of the used detector) and the local gradients of the wavefront …