Fresh Water Studies Commons^™

Rapid Label-Free Detection Of E. Coli Using Antimicrobial Peptide Assisted Impedance Spectroscopy, Keren Jieng, Hashem Etayash, Sarfuddin Azmi, Selvaraj Naicker, Mahtab Hassanpourfard, Parmiss Mojir Shaibani, Garima Thakur, Kamaljit Kaur, Thomas Thundat

Pharmacy Faculty Articles and Research

There is an increasing demand for rapid detection of waterborne pathogens to monitor drinking water safety. We demonstrate a compact, label-free sensor array for rapid detection of Escherichia coli (E. coli) in contaminated water samples using antimicrobial peptide assisted impedimetric sensor platform. Interdigitated electrode arrays immobilized with the antimicrobial peptide Colicin V (ColV) were used to screen the affinity towards different bacterial strains by monitoring impedance variations in real-time. This ColV assisted impedance biosensor exhibited high selectivity towards Gram-negative strains particularly towards E. coli strains. This selective detection of E. coli from other strains was observed at 10 …

Flood-Inundation Maps For The St. Marys River At Decatur, Indiana, Kellan R. Strauch

United States Geological Survey: Water Reports and Publications

Digital flood-inundation maps for an 8.9-mile reach of the St. Marys River at Decatur, Indiana, were developed by the U.S. Geological Survey (USGS), in cooperation with the Indiana Office of Community and Rural Affairs. The inundation maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site (http://water.usgs.gov/osw/flood_inundation/), depict estimates of the areal extent and depth of flooding corresponding to selected water levels (stages) of the St. Marys River at Decatur (USGS station number 04181500). The maps are useful for estimating near-real-time areas of inundation by referencing concurrent USGS streamgage information at http://waterdata.usgs.gov/. In addition, the streamgage …

Simulation Of Groundwater Flow And Analysis Of The Effects Of Water-Management Options In The North Platte Natural Resources District, Nebraska, Steven M. Peterson, Amanda T. Flynn, Joseph Vrabel, Derek W. Ryter

United States Geological Survey: Water Reports and Publications

The North Platte Natural Resources District (NPNRD) has been actively collecting data and studying groundwater resources because of concerns about the future availability of the highly inter-connected surface-water and groundwater resources. This report, prepared by the U.S. Geological Survey in cooperation with the North Platte Natural Resources District, describes a groundwater-flow model of the North Platte River valley from Bridgeport, Nebraska, extending west to 6 miles into Wyoming. The model was built to improve the understanding of the interaction of surface-water and groundwater resources, and as an optimization tool, the model is able to analyze the effects of water-management options …

Urban Stream Burial Increases Watershed-Scale Nitrate Export, Jake J. Beaulieu, Heather E. Golden, Christopher D. Knightes, Paul M. Mayer, Sujay S. Kaushal, Michael J. Pennino, Clay P. Arango, David A. Balz, Colleen M. Elonen, Ken M. Fritz, Brian H. Hill

All Faculty Scholarship for the College of the Sciences

Nitrogen (N) uptake in streams is an important ecosystem service that reduces nutrient loading to downstream ecosystems. Here we synthesize studies that investigated the effects of urban stream burial on N-uptake in two metropolitan areas and use simulation modeling to scale our measurements to the broader watershed scale. We report that nitrate travels on average 18 times farther downstream in buried than in open streams before being removed from the water column, indicating that burial substantially reduces N uptake in streams. Simulation modeling suggests that as burial expands throughout a river network, N uptake rates increase in the remaining open …

Monitoring Water Resources Of The Gulf Mountain Wildlife Management Area To Evaluate Possible Effects Of Natural Gas Development, Bradley J. Austin, Erin E. Scott, Sally Entrekin, Michelle A. Evans-White, Brian E. Haggard

Arkansas Water Resources Center Technical Reports

No abstract provided.

Droughtscape, Summer 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s column

New Drought Risk Management Research Center

Second quarter 2015 climate summary

Second quarter 2015 impacts summary

Caribbean region an innovator in drought early warning

Wind River Reservation tribes move toward drought planning

Ranchers, U.S. Forest Service, University of Arizona co-develop drought plans

Summer blockbuster from CoCoRaHS: Assessing Drought in the U.S

Western states drought coordinators meet

Reducing Nutrient Runoff From Poultry Production Facilities Using Locally-Sourced Iron And Aluminum Byproducts, Sheri Lynn Herron

Graduate Theses and Dissertations

Phosphorus (P) inputs to fresh waters can accelerate the eutrophication process. Agricultural nutrient runoff has been shown to be a contributor of P and nitrogen (N). Broiler production areas were evaluated for their potential to contribute P and N to runoff. Broiler house dust (BHD) samples were analyzed and compared to broiler litter (BL), rainfall simulations were conducted on plots adjacent to broiler house fans to evaluate nutrient enrichment in runoff from deposited dust, and runoff was automatically sampled at two culverts draining the land around broiler houses. Following this, an on-farm byproduct containment and nutrient removal structure was designed …

Umphlett Qci June 2015, Natalie A. Umphlett

High Plains Regional Climate Center: Staff Publications

Highlights for the Basin

Temperature and Precipitation Anomalies

Drought Conditions

Water Supplies Recovering

Heavy Rains Cause Flooding

Agriculture Impacts

3-Month Precipitation and Temperature Outlooks

Constituent Load Estimation In The Lower Ouachita-Smackover Watershed, Zach P. Simpson, Erin E. Scott, Brian E. Haggard

Arkansas Water Resources Center Technical Reports

Water quality was monitored at 21 sites in the Lower Ouachita‐Smackover Watershed from 2013 November through 2014 September. The U.S. Geological Survey maintains discharge monitoring stations at two of these sites, Moro Creek (USGS 07362500) and Smackover Creek (USGS 07362100), which were sampled during base flow and storm event conditions, whereas the other sites were only sampled during baseflow. The Arkansas Water Resources Center (AWRC) estimated constituent loads for nitrate‐N (NO₃‐–N), total nitrogen (TN), soluble reactive phosphorus (SRP), total phosphorus (TP) and total suspended solids (TSS) using the U.S. Geological Survey LOADEST software. LOADEST creates regression models between constituent concentrations …

Stable Isotopes As A Tool To Characterize Carbon Cycling And Develop Hydrologic Budgets In Mantled Karst Settings, Katherine Knierim

Graduate Theses and Dissertations

Isotopes of water (δ2H/δ18O), carbon dioxide (δ13C-CO2), and dissolved inorganic carbon (δ13C-DIC) were used to explore water quality, trace carbon cycling, and quantify recharge sources through mantled karst and into Blowing Spring Cave (BSC). Of the possible sources of contamination in the BSC recharge area, septic-tank effluent was hypothesized to degrade water quality at the spring outlet of BSC because of the dominance of septic tanks for waste treatment, unsuitable topography and soil for septic-tank absorption fields, increased nitrate and chloride concentrations concomitant with increased urbanization, and increased Escherichia coli with discharge. Carbon cycling between the soil and BSC was …

Effects Of Landscape Disturbances On Autotrophic Processes Within Arkansas Ozark Streams, Bradley J. Austin

Graduate Theses and Dissertations

Land-use change is one of the most widespread human impacts and can influence abiotic and biotic processes within surrounding streams. For example, streams in agricultural and urban watersheds receive greater light and nutrient inputs that can promote increased algal growth and primary production. Natural gas (NG) infrastructure development, a recent land use change in many regions, may also stimulate forested stream primary production, by reducing forest cover and increasing sediments and nutrient transport. I sampled streams across a NG activity gradient for algal biomass and gross primary production (GPP) to assess potential effects of this emerging land-use type. Algal biomass …

Improved Monitoring Of The Changjiang River Plume In The East China Sea During The Monsoon Season Using Satellite Borne L-Band Radiometers, Bumjun Kil

Dissertations

Measurement of sea surface salinity (SSS) from Satellite borne L-band (1.4 GHz, 21cm) radiometers (NASA Aquarius/SAC-D and ESA SMOS) in the East China Sea (ECS) is challenging due to the uncertainty of SSS caused by land thermal emissions in the antenna side lobes and because of strong radio frequency interference (RFI) due to illegally emitted man-made sources. RFI contamination in the ECS has gradually decreased because of the on-going international efforts to eliminate broadcasts in the protected L-band radio-astronomy frequency band. The present dissertation focuses on carefully eliminating the remaining RFI contamination in retrieved SSS, and masking out regions close …

A Survey Of Aquatic Organisms For The Cyanotoxin Beta-Methylamino-L-Alanine (Bmaa), Ian M. Sammler

OES Theses and Dissertations

Cyanobacteria blooms are increasing globally as a result of eutrophication. Many cyanobacteria are potentially harmful, not only because of the oxygen depleted zones created when they decay, but also because of the toxins they produce. β- Methylamino-L-alanine (BMAA), reportedly produced by many species of cyanobacteria, is a non-proteinogenic amino acid that has been linked to the development of neurodegenerative diseases (amyotrophic lateral sclerosis (ALS) and Alzheimer's) in humans. This study presents results from an assessment of BMAA in cyanobacteria and their grazers from the lower Chesapeake Bay and Lake Erie regions. BMAA was analyzed in samples prepared with the EZ:Faast™ …

Drougthscape, Spring 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s column.

South Plains ranch workshops 3

First quarter drought summary

First quarter impacts summary

Gary’s favorite pond, D1-4

NDMC’s Haigh leads U2U pubs

SW Montana watersheds convene

Wind River monitors drought

Morocco’s new drought index

Northeast Brazil drought monitoring

EU’s drought initiative

U.S. Drought Monitor Forum

How Colorado tourism coped in 2012

Signed Peer Reviews As A Means To Improve Scholarly Publishing, Linwood H. Pendleton

Journal of Ocean and Coastal Economics

Peer review is a necessary process with a long history of complaints, including over-solicitation of a small number of reviewers, delays, inadequate numbers of reviewers, and a lack of incentives to provide strong reviews or avoid reviews with little helpful information for the author. In the era of Web-based distribution of research, through working paper or project reports, anonymous peer reviews are much less likely. The Journal of Ocean and Coastal Economics will use signed peer reviews and an open communication process among authors, reviewers, and editors. This approach, to be developed over time, should lead to stronger communication of …

Hydrographic Surveys At Seven Chutes And Three Backwaters On The Missouri River In Nebraska, Iowa, And Missouri, 2011-13, Justin R. Krahulik, Brenda K. Densmore, Kayla J. Anderson, Cory L. Kavan

United States Geological Survey: Water Reports and Publications

The United States Geological Survey (USGS) cooperated with the United States Army Corps of Engineers (USACE), Omaha District, to complete hydrographic surveys of seven chutes and three backwaters on the Missouri River yearly during 2011–13. These chutes and backwaters were constructed by the USACE to increase the amount of available shallow water habitat (SWH) to support threatened and endangered species, as required by the amended “2000 Biological Opinion” on the operation of the Missouri River main-stem reservoir system. Chutes surveyed included Council chute, Plattsmouth chute, Tobacco chute, Upper Hamburg chute, Lower Hamburg chute, Kansas chute, and Deroin chute. Backwaters surveyed …

Umphlett Qci March 2015, Natalie Umphlett

High Plains Regional Climate Center: Staff Publications

Highlights for the Basin

Temperature and Precipitation Anomalies

Mountain Snowpack

Agriculture

Recreation and Tourism

Forestry

Drought Impacts Continue

3-Month Precipitation and Temperature Outlooks

U.S. Seasonal Drought Outlook

Oregon Lake Watch, 2014 Annual Report, Meredith Jordan, Rich Miller, Angela L. Strecker

Center for Lakes and Reservoirs Publications and Presentations

The Oregon Lake Watch (OLW) volunteer monitoring program is now in its second year of operation, continuing its focus on early detection of aquatic invasive species (AIS), with a secondary focus on lake water quality. The aquatic invasive species chosen as Watch List priorities for the OLW are based on the Oregon Department of Agriculture’s Noxious Weed List (Oregon Department of Agriculture Noxious Weed Control Program 2014) as well as professional judgement (more information can be found in Oregon Lake Watch Final Report 2014). This report summarizes the data collected by 15 of 24 OLW volunteers over 2014, across 110 …

Zebra And Quagga Mussel Early-Detection Monitoring In High Risk Oregon Waters 2014, Steve W. Wells, Mark D. Sytsma

Center for Lakes and Reservoirs Publications and Presentations

Zebra and quagga mussels (Dreissena polymorpha and D. rostriformis bugensis, respectively) were not detected by Oregon Department of Fish and Wildlife (ODFW) and Portland State University (PSU) during their early detection sampling in Oregon water bodies during 2014. Six high-risk Oregon water bodies were sampled for planktonic larvae and adult mussels during the August to September period. A total of 37 plankton samples were collected and over 520,000 liters of reservoir/lake water were filtered through 64-μm mesh nets during plankton sample collection. The greatest sampling effort occurred in Emigrant Lake, Lake Billy Chinook, and Prineville Reservoir but sampling also occurred …

Assessing The Economic Costs Of Water Pollution In The Yangtze River, China, Xiaoli Zhang

Journal of Ocean and Coastal Economics

Water pollution of the Yangtze River basin is very serious. Studies have shown that from the upper to the lower river, the water volume decreases and development and pollution increase, especially in trans-boundary areas. The Yangtze Estuary is located at the intersection of Jiangsu Province and Shanghai where the waters flow directly into the East China Sea. The estuary provides drinking water to many people and serves multiple other functions, including agricultural irrigation, tourism, and aquaculture. It plays a pivotal role in the local social and economic development and in people’s general wellbeing. Directly or indirectly, the pollution of the …

Evaluating The Assessment Methodology For The Chlorophyll-A And Secchi Transparency Criteria At Beaver Lake, Arkansas, J. Thad Scott, Brian E. Haggard

Arkansas Water Resources Center Technical Reports

No abstract provided.

Drougthscape, Winter 2015, Kelly Smith

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Director’s report

Central U.S. 2012 report

October-December drought summary

2014 drought summary

Caribbean capacity building

Drought impacts in 2014

California timeline 2014

UC Davis ranching workshop

NASA SMAP data

Global drought info system

Community Capitals

Evaluation and assessment

Indicator-impact research

NDMC on YouTube

Proof-Of-Concept Of Environmental Dna Tools For Atlantic Sturgeon Management, Jameson Hinkle

Theses and Dissertations

Abstract

The Atlantic Sturgeon (Acipenser oxyrinchus oxyrinchus, Mitchell) is an anadromous species that spawns in tidal freshwater rivers from Canada to Florida. Overfishing, river sedimentation and alteration of the river bottom have decreased Atlantic Sturgeon populations, and NOAA lists the species as endangered. Ecologists sometimes find it difficult to locate individuals of a species that is rare, endangered or invasive. The need for methods less invasive that can create more resolution of cryptic species presence is necessary. Environmental DNA (eDNA) is a non-invasive means of detecting rare, endangered, or invasive species by isolating nuclear or mitochondrial DNA (mtDNA) from the …

The Gravity Environment Of Zhouqu Debris Flow Of August 2010 And Its Implication For Future Recurrence, Diandong Ren, Lance M. Leslie, Xinyi Shen, Yang Hong, Qingyun Duan, Rezaul Mahmood, Yun Li, Gang Huang, Weidong Guo, Mervyn J. Lynch

High Plains Regional Climate Center: Staff Publications

This study investigates the geological background of the August 7-8, 2010 Zhouqu debris flows in the northwestern Chinese province of Gansu, and possible future occurrence of such hazards in the peri-Tibetan Plateau (TP) regions. Debris flows are a more predictable type of landslide because of its strong correlation with extreme precipitation. However, two factors affecting the frequency and magnitude of debris flows: very fine scale precipitation and degree of fracture of bedrock, both defy direct observations. Annual mean Net Primary production (NPP) is used as a surrogate for regional precipitation with patchiness filtered out, and gravity satellite measured regional mass …

Development Of A Long-Term (1884-2006) Serially Complete Dataset Of U.S. Temperatures And Precipitation For Climate Services, Jinshing You, Kenneth G. Hubbard, Martha Shulski, Mark D. Svoboda, Michael J. Hayes

High Plains Regional Climate Center: Staff Publications

Serially complete climate datasets with no missing data are necessary for a diverse group of users working in many economic sectors. In this article we describe the procedures used to create a Serially Complete Data set (SCD) for the U.S. We include the selection criterion applied to potential SCD stations, the various procedural steps and the details applied to each step. A few observations that were not previously digitized were obtained from observers official paper reports. The methods used to estimate missing data are the Spatial Regression Test and the Inverse Distance Weighting technique. Using the criterion for selecting stations …

A Historical Perspective On Nebraska’S Variable And Changing Climate, Martha Shulski, William Baule, Crystal J. Stiles, Natalie A. Umphlett

High Plains Regional Climate Center: Staff Publications

Nebraska is situated at the intersection of the northern and southern Great Plains, exhibiting a dramatic longitudinal gradient for precipitation and humidity, and benefiting from groundwater resources. The continental climate is highly variable temporally both for temperature and precipitation. Our assessment of long-term meteorological observations shows that over the last century the annual average temperature in Nebraska has warmed approximately 0.6°C, which is similar to the increase in the global average temperature over the same time period. Furthermore, we found minimum temperatures have warmed more than maximum temperatures, and winter and spring show the strongest warming. We found no significant …

Detection, Occurrence And Fate Of Emerging Contaminants In Agricultural Environments, Daniel D. Snow, David A. Cassada, Shannon L. Bartelt-Hunt, Xu Li, Matteo D'Alessio, Rachel Levine, Yun Zhang, J. Brett Sallach

Nebraska Water Center: Faculty Publications

A total of 43 papers published in 2014 were reviewed ranging from detailed descriptions of analytical methods, to fate and occurrence studies, to measuring and predicting biological effects for a wide variety of emerging contaminants likely to occur in agricultural environments. New methods and studies on veterinary pharmaceuticals, natural and synthetics steroids, and antibiotic resistance genes in agricultural environments continue to expand our knowledge base on the occurrence and potential impacts of these compounds. This review is divided into the following sections: Introduction, Analytical Methods, Occurrence and Fate, Antibiotic Resistance Genes, and Risk Assessment.

Habitat Assessment And Ecological Restoration Design For An Unnamed Tributary Of Stone Dam Creek, Conway, Arkansas, Paige E. Boyle, Mary C. Savin, James A. Mccarty, Marty D. Matlock

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Urbanization can lead to increased sedimentation, erosion, pollution, and runoff into streams. The United States Environmental Protection Agency’s (USEPA) Rapid Bioassessment Protocols (RBPs) are sets of guidelines that can be used to assess a habitat’s sedimentology, hydrology, vegetation, and geomorphology to determine impairment. An unnamed tributary of Stone Dam Creek on the University of Central Arkansas (UCA) campus in Conway, Arkansas runs partially underground and through the urbanized UCA campus watershed. The stream was assessed using the USEPA’s RBPs to determine impairment of the stream, and received a RBP score of 71.2 out of 200 compared to 153.5 in a …

River Report. State Of The Lower St. Johns River Basin, Florida: Water Quality, Fisheries, Aquatic Life, Contaminants, 2015, Environmental Protection Board, City Of Jacksonville, University Of North Florida, Jacksonville University, Lucy Sonnenberg, Gerry Pinto, Nisse Goldberg, Anthony Ouellette, Gretchen Bielmyer-Fraser, Stuart J. Chalk, Peter Bacopoulos, Brian P. Zoellner

State of the River Report

No abstract provided.

A Freshwater Community On The Shawangunk Ridge In The Lower Mid-Hudson Valley, New York, Beryl Kahn, Howard R. Feldman, Leah Horowitz

Lander College for Women - The Anna Ruth and Mark Hasten School Publications and Research

The Shawangunk Ridge in the lower mid-Hudson Valley extends from the vicinity of Rosendale through New Jersey, Pennsylvania, Maryland and Virginia. Within the first thirty miles can be found five “sky lakes”: Mohonk, Minnewaska, Awosting, Mud Pond and Maratanza. Since these lakes occur on the top of the ridge they have no drainage basin. Here we report on the pH and other abiotic factors that impact the aquatic fauna of Mohonk Lake. The pH of the lake is 7 near the surface. Lake Minnewaska’s pH increased from 4 to 6 in the last twenty years. The pH of the other …