Environmental Indicators and Impact Assessment Commons^™

Fine Grained Compositional Analysis Of Port Everglades Inlet Microbiome Using High Throughput Dna Sequencing, Lauren M. O'Connell, Song Gao, Donald S. Mccorquodale Jr., Jay M. Fleisher, Jose Lopez

Marine & Environmental Sciences Faculty Articles

Background

Similar to natural rivers, manmade inlets connect inland runoff to the ocean. Port Everglades Inlet (PEI) is a busy cargo and cruise ship port in South Florida, which can act as a source of pollution to surrounding beaches and offshore coral reefs. Understanding the composition and fluctuations of bacterioplankton communities (“microbiomes”) in major port inlets is important due to potential impacts on surrounding environments. We hypothesize seasonal microbial fluctuations, which were profiled by high throughput 16S rRNA amplicon sequencing and analysis.

Methods & Results

Surface water samples were collected every week for one year. A total of four samples …

Adam J. Liska: Curriculum Vitae, Adam Liska

Adam Liska Papers

Associate Professor, George Dempster Smith Chair of Industrial Ecology, Departments of Biological Systems Engineering and Agronomy & Horticulture, University of Nebraska-Lincoln 236 L.W. Chase Hall, Lincoln, NE 68583-0726, Ph: (402) 472-8744, e-mail: [email protected]

Ph.D. 2003 Biology (magna cum laude), Max Planck Institute of Molecular Cell Biology & Genetics, Technische Universität Dresden, Dresden, Germany

Investigating Initial Interactions Between Silver Nanoparticles And Wastewater, Casey Gibson

Biological and Agricultural Engineering Undergraduate Honors Theses

The use of nanoparticles (NPs) has increased exponentially in the last 15-20 years, especially in the consumer market. NPs are currently found in over 1800 commercial products, including cosmetics, clothing, packaging, and toys. As a result, NPs can enter the environment via wastewater (WW) streams, leading to new challenges in WW treatment. This study focuses on the initial fate of silver nanoparticles (AgNPs) in WW. The AgNP interaction including aggregation and dissolution in both synthetic and real WW were studied. Real WW was collected from the primary-clarifier, secondary-clarifier, and effluent WW streams at two local WW treatment plants (Westside and …

Comparative Analysis Of Survival And Decay Of Fecal Indicator Bacteria In Bovine Feces And Freshwater Microcosms, Reem Tariq

Electronic Theses and Dissertations

Agricultural runoff can carry FIB that can pollute surface waters through the soil matrix. This study was designed to inspect the impact of temperature and matrix on the survival of FIB. The FIB were routinely enumerated over an 18-day period from fecal samples and freshwater microcosms maintained at 4oC, 22oC, and 35oC. It was found that the FIB studied underwent a primary growth of up to 1-log10 to 3-log10, highlighting the weakness of conventional FIB as indicators of pathogen contamination. The concentrations of FIB in the water phase were found to be significantly greater than those observed in the fecal …

Soil Organic Carbon And Mineralization Rates At The Woolsey Wet Prairie Mitigation Site In Fayetteville, Arkansas, Zachary Tipton

Crop, Soil and Environmental Sciences Undergraduate Honors Theses

Atmospheric carbon dioxide (CO2) levels are higher than ever recorded, surpassing 400 ppm in 2013, from a pre-industrial revolution level of around 280 ppm. Researchers have been looking at methods to mitigate high CO2 levels in the atmosphere, including promoting carbon sequestration in soils. Carbon sequestration is the process where CO2 is naturally or artificially transferred out of the atmosphere and stored in the ocean, plant biomass, soils, and geologic formations. Seemingly contradictory to the notion of carbon sequestration, is the use of fire as a management treatment for the restoration of native prairie grass ecosystems. Fire combusts plant biomass …

Plant Biodiversity In The Face Of Climate Change: What Will Become Of Coastal Endemic Species?, Nila Le

Creative Activity and Research Day - CARD

How will longitudinally constrained coastal flora fare in the face of rapid anthropogenic climate change and disturbance? Coastal communities pose a unique problem for climate change and its associated risks. Species that are concentrated along the coast are naturally vulnerable to the influence of harsh abiotic ecology, such as coastal erosion and high salt concentrations. In addition, analogous to montane species-habitat interactions, coastal communities may be “pushed” off the coast edge as a result of tracking preferred climate in the face of climate variability and sea level rise. This can be problematic for species that cannot disperse quickly enough to …

An Assessment Of Atmospheric And Meteorological Factors Regulating Red Sea Phytoplankton Growth, Wenzhao Li, Hesham El-Askary, Mohamed A. Qurban, Emmanouil Proestakis, Michael J. Garay, Olga V. Kalishnikova, Vassilis Amiridis, Antonis Gkikas, Eleni Marinou, Thomas Piechota, K. P. Manikandan

Mathematics, Physics, and Computer Science Faculty Articles and Research

This study considers the various factors that regulate nutrients supply in the Red Sea. Multi-sensor observation and reanalysis datasets are used to examine the relationships among dust deposition, sea surface temperature (SST), and wind speed, as they may contribute to anomalous phytoplankton blooms, through time-series and correlation analyses. A positive correlation was found at 0–3 months lag between chlorophyll-a (Chl-a) anomalies and dust anomalies over the Red Sea regions. Dust deposition process was further examined with dust aerosols’ vertical distribution using satellite lidar data. Conversely, a negative correlation was found at 0–3 months lag between SST anomalies …

2018 3rd Place: The Growth And Characterization Of Psychromonas Aquimarina, A New Model Organism For Climate Change, Carrie Carpenter, Catherine Santai

Harrisburg University Research Symposium (2018 & 2019)

Climate change is currently affecting the Earth and will only increase with time1. A change to the environment means that wildlife will need to adapt. Adaptation occurs when an organism changes physiologically or otherwise to permit continued growth in the environment in which it resides. Scientists do not completely understand adaptation mechanisms. Psychromonas aquimarinais a novel bacterium, with little known. This bacteria will first be characterized and studied before conducting temperature studies. Psychromonas aquimarina is a psychrophile, a bacterium able to survive in colder regions where most bacteria would not. P. aquimarinais an ideal bacterium to study because climate change …

Downscaling Africa’S Drought Forecasts Through Integration Of Indigenous And Scientific Drought Forecasts Using Fuzzy Cognitive Maps, Muthoni Masinde, Mwanjele Mwagha, Tsegaye Tadesse

National Drought Mitigation Center: Faculty Publications

In the wake of increased drought occurrences being witnessed in Sub-Saharan Africa, more localized and contextualized drought mitigation strategies are on the agendas of many researchers and policy makers in the region. The integration of indigenous knowledge on droughts with seasonal climate forecasts is one such strategy. The main challenge facing this integration, however, is the formal representation of highly-structured and holistic indigenous knowledge. In this paper, we demonstrate how the use of fuzzy cognitive mapping can address this challenge. Indigenous knowledge on droughts from five communities was modeled and represented using fuzzy cognitive maps. Maps from one of these …

Assessing Land Deformation And Sea Encroachment In The Nile Delta, Egypt, Esayas Gebremichael

Research and Creative Activities Poster Day

Persistent scatterer interferometric analyses were conducted on a stack of 84 Envisat ASAR scenes spanning 7 years (2004 to 2010) over the entire Nile Delta of Egypt and surroundings to monitor the ongoing spatial and temporal land deformation, identify the factors controlling the deformation, and model the interplay between sea level rise and land subsidence to identify areas and populations threatened by sea encroachment by the end of the 21st century. Findings include: (1) general patterns of subsidence in the northern delta, near-steady (none) subsidence in the southern delta, separated by a previously mapped flexure zone undergoing uplift; (2) high …

Drought Drives Rapid Shifts In Tropical Rainforest Soil Biogeochemistry And Greenhouse Gas Emissions, Christine S. O'Connell, Leilei Ruan, Whendee L. Silver

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

Climate change models predict more frequent and severe droughts in the humid tropics. How drought will impact tropical forest carbon and greenhouse gas dynamics is poorly understood. Here we report the effects of the severe 2015 Caribbean drought on soil moisture, oxygen, phosphorus (P), and greenhouse gas emissions in a humid tropical forest in Puerto Rico. Drought significantly decreases inorganic P concentrations, an element commonly limiting to net primary productivity in tropical forests, and significantly increases organic P. High-frequency greenhouse gas measurements show varied impacts across topography. Soil carbon dioxide emissions increase by 60% on slopes and 163% in valleys. …

Lichen Abundance And Diversity In Relation To Host Tree Species And Lakeshore Proximity, Theodore Roper

Conspectus Borealis

No abstract provided.

Validation Of New Satellite Rainfall Products Over The Upper Blue Nile Basin, Ethiopia, Getachew Tesfaye Ayehu, Tsegaye Tadesse, Berhan Gessesse, Tufa Dinku

National Drought Mitigation Center: Faculty Publications

Accurate measurement of rainfall is vital to analyze the spatial and temporal patterns of precipitation at various scales. However, the conventional rain gauge observations in many parts of the world such as Ethiopia are sparse and unevenly distributed. An alternative to traditional rain gauge observations could be satellite-based rainfall estimates. Satellite rainfall estimates could be used as a sole product (e.g., in areas with no (or poor) ground observations) or through integrating with rain gauge measurements. In this study, the potential of a newly available Climate Hazards Group Infrared Precipitation with Stations (CHIRPS) rainfall product has been evaluated in comparison …

Conductivity, Temperature, And Depth (Ctd) Data For Deepend Stations, Cruise Dp05, May 2017, David English, Chuanmin Hu, April Cook, Tracey Sutton

DEEPEND Datasets

Conductivity, temperature, and depth data from the ship's CTD, which was deployed at each of the DEEPEND stations. Depth of cast was variable, but extended from near-surface waters to below the euphotic zone. This data also includes measurements from a red light transmissometer, a chlorophyll fluorometer, and a dissolved oxygen sensor. The data is used in the assessment of the water column's vertical structure, and for comparison with physical models. Data were collected in the northern Gulf of Mexico from May 2-12, 2017.

Conductivity, Temperature And Depth (Ctd) Data For Deepend Stations, Cruise Dp03, May 2016, David English, Chuanmin Hu, April Cook, Tracey Sutton

DEEPEND Datasets

Conductivity, temperature and depth data from the ship's CTD, which is deployed at each of the DEEPEND stations. Depth of cast is variable, but extends from near-surface waters to below the euphotic zone. This data is used in the assessment of the water column's vertical structure, and for comparison with physical models. Data were collected during cruise DP03 in the northern Gulf of Mexico, May 2016.

Geochemistry Of Archaeological And Marine Environments In Southwest Maine, Heather L. Bushie

Thinking Matters Symposium Archive

Two archaeological excavations for the University of Southern Maine collected sediment columns from select units for geological and chemical analysis. The Spiller Farms site is a Native American site located in Wells, Maine marking a transition period between the Pleistocene and Holocene epochs, 12,000 BP. The Malaga Island site was a historic mixed-race community at the north end of Casco Bay where sediment columns were obtained in near-shore and subtidal zones. The samples obtained from Malaga Island have been radiocarbon dated to 3800 +/- 30 BP at 23 meters below the low-tide line. X-ray fluorescence (XRF) analysis is being conducted …

The Prairie Post Quarterly Newsletter Of The High Plains Regional Climate Center- April 2018, Natalie Umphlett, Crystal J. Stiles, Shellie Hanneman

Prairie Post: Quarterly Newsletter of the High Plains Regional Climate Center

Inside this issue:

Message from the interim director........................................1

Weather photo of the quarter.........................................1

Tribal climate summaries......2

Product highlights..................3

Update on regional climate conditions..................................4

State Climate Extremes Committee.................................4

Update on research................5

Recent and upcoming travel and activities.............................6

Let’S Talk Takataka: Impacts Of Plastic In The Stone Town Harbor Area, Zanzibar, Cj O’Brien

Independent Study Project (ISP) Collection

Plastic pollution has become an anthropogenic crisis worldwide. In the Stone Town Harbor area in particular, consumerism, population growth, tourism and a deficient municipal waste management system contribute to alarming amounts of mismanaged plastic that enter the ocean. This is devastating for the diverse marine ecosystem that provides valuable resources to its flora and fauna and to it human inhabitants. In this study, micro-plastic at the sea surface as well as plastic on coastal beaches was quantified to determine the effects of plastic pollution in the area by use of a standard plankton net methodology. This study contributed to the …

A Comparative Tree Survey Of Disturbed And Primary Forest Areas: Ngezi-Vumawimbi Nature Forest Reserve, Pemba Island, Skyler Smith

Independent Study Project (ISP) Collection

Off the coast of Tanzania, in East Africa, the island of Pemba was once covered in pristine forest despite having a small, agriculturally-based human population. Beginning around 1840, however, the island began to be deforested on a large scale for colonial plantations of cash crops such as cloves and rubber as well as for small-scale farms and firewood. Ngezi-Vumawimbi Nature Forest Reserve covers about 1,440 hectares and is all that remains of these once vast forests. The reserve was officially designated in 1957 but timber extraction and exploitation there continued until the late 1980s. In the early 1970s, a large …

Primary Atmospheric Drivers Of Pluvial Years In The United States Great Plains, Paul Flanagan, Jeffrey B. Basara, Jason C. Furtado, Xiangming Xiao

High Plains Regional Climate Center: Staff Publications

Precipitation variability has increased in recent decades across the Great Plains (GP) of the United States. Drought and its associated drivers have been studied in the GP region; however, periods of excessive precipitation (pluvials) at seasonal to interannual scales have received less attention. This study narrows this knowledge gap with the overall goal of understanding GP precipitation variability during pluvial periods. Through composites of relevant atmospheric variables from the ECMWF twentieth-century reanalysis (ERA-20C), key differences between southern Great Plains (SGP) and northern Great Plains (NGP) pluvial periods are highlighted. The SGP pluvial pattern shows an area of negative height anomalies …

Psu Market Center Building Leed Eb Materials Audit Report, Christa Mcdermott, Emily Murkland, Bryan Nguyen, Tay Stone, Rushada Wimer

Campus Sustainability Office Publications, Reports and Presentations

This report provides Portland State University’s (PSU) Campus Sustainability Office (CSO), with an objective third party LEED O+M Materials Assessment of PSU’s Market Center Building (MCB). The data collected for this audit provides CSO with insight into the building’s current waste composition and diversion rate. Additionally, it identifies opportunities to reduce the amount of recoverable materials ending up in the landfill stream. Community Environmental Services (CES) conducted material audits for 100% of MCB’s landfill-bound, commingled recycling, glass bottles and jars recycling, and compost streams during a 24-hour period.

Droughtscape, Spring 2018, National Drought Mitigation Center

DroughtScape: Quarterly Newsletter of the National Drought Mitigation Center (2007–2023)

Contents

Drought shifts to south in beginning of 2018

Ag records impacts; strong fire season forecast

Drought maps show regional and river forecast areas

Greenness indicator could save lives in Africa

NDMC on a global playing field

Visitors from Korea tap drought resources, experts

Svoboda named to United Nations advisory group

Responding to drought in the Southern Plains

Crops, cattle and climatology in the Upper Niobrara

Connecting locally for global change

Gouldian Finch Non Breeding Population And Habitat Assessment 2018: Ord-East Kimberley Expansion Project - Weaber Plain Development Area, Save The Gouldian Fund

Irrigated Agricultural Development in the North

As part of the requirement for State approval under the Environment Protection and Biodiversity Conservation Act 1999, an assessment and regular monitoring of the endangered Gouldian finch (Erythrura gouldiae) is required during the operation of the Ord River Irrigation Area Weaber Plain Development Project in the Kimberley, Western Australia. This report details the findings from the habitat and vegetation surveys of non breeding Gouldian finches (September 2017 – March 2018).

Africa's Urban Adaptation Transition Under A 1.5° Climate, Mark Pelling, Hayley Leck, Lorena Pasquini, Idowu Ajibade, Emanuel Osuteye, Susan Parnell, Shuaib Lwasa, Cassidy Johnson, Arabella Fraser, Alejandro Barcena, Soumana Boubacar

Geography Faculty Publications and Presentations

For cities in sub-Saharan Africa a 1.5 °C increase in global temperature will bring forward the urgency of meeting basic needs in sanitation, drinking water and land-tenure, and underlying governance weaknesses. The challenges of climate sensitive management are exacerbated by rapid population growth, deep and persistent poverty, a trend for resolving risk through relocation (often forced), and emerging new risks, often multi-hazard, for example heat stroke made worse by air pollution. Orienting risk management towards a developmental agenda can help. Transition is constrained by fragmented governance, donor priorities and inadequate monitoring of hazards, vulnerability and impacts. Opportunities arise where data …

Quantifying Permafrost Extent, Condition, And Degradation Rates At Department Of Defense Installations In The Arctic, Christopher A. J. Edlund

Theses and Dissertations

The DoD is planning over $500M in military construction on Eielson Air Force Base (AFB) within the next three years. This construction program will expand the footprint of facilities and change parts of the storm water management scheme, which may have second order effects on the underlying permafrost layer. These changes in permafrost will drive engineering decision making at local and regional levels, and help shape the overall strategy for military readiness in the Arctic. Little site-specific knowledge exists on the human caused effects to permafrost at this location. In 2016, the permafrost degradation rates at Eielson AFB were modeled …

Precipitation Extremes In Dynamically Downscaled Climate Scenarios Over The Greater Horn Of Africa, Andualem Shiferaw, Tsegaye Tadesse, Clinton M. Rowe, Robert Oglesby

National Drought Mitigation Center: Faculty Publications

This study first assesses the performance of regional climate models in the Coordinated Regional Climate Downscaling Experiment (CORDEX) in reproducing observed extreme precipitation indices over the Greater Horn of Africa (GHA) region during 1989–2005. The study then assesses projected changes in these extremes during 2069–2098 compared to 1976–2005. The Regional Climate Model (RCM) simulations are made using two RCMs, with large-scale forcing from four CMIP5 Global limate Models(GCMs) under two Representative Concentration Pathways (RCP4.5 and RCP8.5). We found that RCM simulations have reasonably captured observed patterns of moderate precipitation extreme indices (MPEI). Pattern correlation coefficients between simulated and observed MPEI …

Spatio-Temporal Pattern Estimation Of Pm2.5 In Beijing-Tianjin-Hebei Region Based On Modis Aod And Meteorological Data Using The Back Propagation Neural Network, Xialing Ni, Chunxiang Cao, Yuke Zhou, Xianghui Cui, Ramesh Singh

Mathematics, Physics, and Computer Science Faculty Articles and Research

With the economic growth and increasing urbanization in the last three decades, the air quality over China has continuously degraded, which poses a great threat to human health. The concentration of fine particulate matter (PM2.5) directly affects the mortality of people living in the polluted areas where air quality is poor. The Beijing-Tianjin-Hebei (BTH) region, one of the well organized urban regions in northern China, has suffered with poor air quality and atmospheric pollution due to recent growth of the industrial sector and vehicle emissions. In the present study, we used the back propagation neural network model approach to estimate …

A Naturalist’S Guide To The Great Plains, Paul A. Johnsgard

Zea E-Books Collection

This book documents nearly 500 US and Canadian locations where wildlife refuges, nature preserves, and similar properties protect natural sites that lie within the North American Great Plains, from Canada’s Prairie Provinces to the Texas-Mexico border. Information on site location, size, biological diversity, and the presence of especially rare or interesting flora and fauna are mentioned, as well as driving directions, mailing addresses, and phone numbers or internet addresses, as available. US federal sites include 11 national grasslands, 13 national parks, 16 national monuments, and more than 70 national wildlife refuges. State properties include nearly 100 state parks and wildlife …

Microbiome And Bacterioplankton Rrna Gene Sequence Data Collected From Gulf Of Mexico Seawater Samples, Cruises Dp03 And Dp04 From April - August 2016, Cole Easson, Lindsey Freed

DEEPEND Datasets

Seawater was collected and filtered for microbiome and bacterioplankton sequencing and analyses at various depths during planned DEEPEND cruise expeditions to the GOM in 2016. Filters were stored and then processed for total environmental genomic DNA according to standard methods (see earthmicrobiome.org). 16S rRNA amplicon libraries covering the V4 hypervariable regions were generated with universal PCR primers and then sequenced on an Illumina MiSeq DNA sequencing platform. Raw paired-end sequences were joined and quality filtered in the bioinformatics program, QIIME. Vertical baseline characterizations will track alpha and beta diversity at different depths ranging from 0 – 1500 m, assess seasonal …

Synchrony — An Emergent Property Of Recreational Fisheries, Mark A. Kaemingk, Christopher J. Chizinski, Keith Hurley, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

1. Recreational fisheries are traditionally managed at local scales, but more effective management could be achieved using a cross-scale approach. To do this, we must first understand how local processes scale up to influence landscape patterns between anglers and resources. We highlight how population-based synchrony methods, used in conjunction with a complex-adaptive-systems framework, can reveal emergent spatial properties within social-ecological systems such as recreational fisheries.

2. Herein, we quantified the level of spatial synchrony in angler behaviour, defined the relationship between angler synchrony and distance among waterbodies, and highlighted social-ecological attributes contributing to these patterns. We leveraged a 111 waterbody-year …