Soil Science Commons^™

Nebraska Statewide Groundwater-Level Monitoring Report 2025, Aaron R. Young, Mark E. Burbach, Sue Olafsen Lackey, Robert Matthew Joeckel, Jeffrey Westrop

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Remediation Impacts Metal Concentrations And Metal Tolerant Bacteria In Soils Of The Missouri Tri-State Mining District, Ophelia R. Pettington

Graduate Theses/Dissertations

After over 100 years of Zn and Pb mining in the Tri-State mining district (TSMD), former mines continue to be sources of metals. Metal contaminated soils can be remediated using plant-microbe interactions. Plants manipulate their microbiome and recruit microbes to increase metal tolerance. Remediating bacteria are site-specific and identifying native microbes can accelerate remediation efforts. Studies relating microbes and metal concentrations in remediated areas in the TSMD are scarce. I collected root and bulk zone soils associated with Andropogon virginicus from remediated and non-remediated sites in Webb City, MO. I used 16S rRNA gene amplicon sequencing to evaluate the bacterial …

Soil Organic Carbon And Soil Health Property Responses To Land Management Across Topographic Positions, Mia D. Makovsky

All Graduate Theses, Dissertations, and Other Capstone Projects

uring the last ice age, ice sheets advanced and retreated across the upper Midwest, leaving behind a landscape characterized by poorly drained hummocky topography. Well-aerated soils have formed on uplands and lowlands are dominated by hydric soils. These wetlands and hydric soils have potential to store large quantities of carbon, particularly compared to the well-aerated uplands, but many have been drained and cultivated for decades. Conservation agriculture methods have emerged to protect and conserve soil health from negative effects due to cultivation.The purpose of this study is to determine how agricultural management practices and landscape properties (e.g, topographic position) affect …

A Conserved Ethylene-Triggered Cell Death Mechanism May Underlie Hollow Stem Formation Across Plant Species, Mengxiao Yan, Weijuan Fan, Yinghui Meng, Jiamin Zhao, Wei Yang, Ziyin Xu, Yusen Gao, Haiyan Zhuang, Wuyu Zhou, Yuqin Wang, Qingjun Huang, Ling Yuan, Hongxia Wang, Jun Yang

Plant and Soil Sciences Faculty Publications

Hollow stems have independently evolved multiple times across the plant kingdom and play crucial roles in plant development and various environmental adaptations. However, the mechanisms underlying stem hollowness remain poorly understood. Water spinach (Ipomoea aquatica) is one of the few hollow-stemmed plants in the Convolvulaceae family (eudicot: asterid), and its hollow stems are essential for thriving in aquatic environments. Using histochemical staining and transcriptome analysis, we found that programmed cell death (PCD) is involved in cavity formation at water spinach shoot tips. Single-cell and spatial transcriptome analyses further revealed that ethylene and reactive oxygen species (ROS) likely drive …

Supplemental Bibliographic Details. From 2001 Mars Odyssey To Earth’S Climate Crisis: Integrating Gamma Spectroscopy, Martian Soil Simulants, And Plant Genomes For Agroecology, Anchored In Sri Lanka’S Mars-Context Serpentinites, Suniti Karunatillake, Maheshi Dassanayake, Carlos Gary Bicas

Planetary Science Lab

Bibliographic details follow to supplement hyperlinked citations in the multinational GANGOTRI-supporting project conceived by Karunatillake, Dassanayake, and Gary-Bicas

Nonpyrogenic "Black" Nitrogen Likely Plays A Major Yet Underrecognized Role In The Global Nitrogen Cycle, João Vitor Dos Santos, Aleksandar I. Goranov, Kyle M. Lambert, Theodoro Da Rosa Salles, Susan J. Carter, Ann Pearson, Patrick G. Hatcher

Chemistry & Biochemistry Faculty Publications

Condensed aromatic nitrogen (ConAN) is commonly found in soil and aquatic environments. ConAN is broadly viewed by the biogeochemistry community as a combustion-derived product leading to its frequent designation as pyrogenic “black” nitrogen. Here, we provide evidence that ConAN can also form through nonpyrogenic pathways. In an experiment simulating biomass oxidation, pine wood boards assembled with iron nails were exposed to 12 years of natural environmental conditions. Nitrogen concentrations increased from 0.2 to 1.2 wt % with increasing proximity to the nail. Ultrahigh resolution mass spectrometry showed enrichment of nitrogen-containing compounds within the lignin and condensed aromatic domains. X-ray spectroscopic …

Impacts Of Management Practices And Soil Properties On Free-Living Nitrogen Fixation In Eastern South Dakota, Laura Galvan Nuevo

Electronic Theses and Dissertations

Free-living nitrogen (N) fixation (FLNF) may represent a sustainable pathway to supplement crop N demand in agroecosystems, yet edaphic and management factors regulating this process under field conditions remain poorly understood in the Northern Great Plains. Using 15N2 direct method to quantify potential FLNF (pFLNF) and baseline FLNF (bFLNF), this thesis investigates how crop rotations (2-, 3-, and 4-year systems), tillage management (conventional vs. no-till), cover cropping, and soil properties affect the potential of free-living diazotrophs to supply N via FLNF in a long-term no-till corn-based system in Southeastern South Dakota. A two-year field study evaluated pFLNF across four growing …

A Simple Statistical Tool To Correct The Daily Temperature Effect On Dielectric Soil Matric Potential Sensor Readings, Sebastián Bravo Peña, Meindert Commelin, Ole O. Wendroth

Plant and Soil Sciences Faculty Publications

High-resolution time series recorded by soil water dielectric sensors are often affected by other processes. Dielectric soil matric potential sensors, such as the TEROS 21, exhibit temperature sensitivity, resulting in deviations of readings from the true value due to soil temperature fluctuations. However, methods for correcting this effect remain limited. The objective of this study was to create a straightforward, scale-based statistical approach to mitigate the influence of daily temperature oscillations on matric potential dielectric readings. The temperature sensitivity correction function (TSCF) identifies, quantifies, and smooths diurnal fluctuations caused by soil temperature dynamics. We provide a detailed description of the …

Field-Scale Evaluation Of Satellite- Derived Vegetation Indices And Image Timing For In-Season Nitrogen Management In Corn, Ana Morales-Ona, Katsutoshi Mizuta, James J. Camberato, Robert Nielsen, Yuxin Miao, Davide Cammarano, German Mandrini, Daniel Quinn

Plant and Soil Sciences Faculty Publications

Introduction: Traditional methods to determine the agronomic optimum nitrogen rate (AONR) for corn (Zea mays L.) rely on grain yield data, limiting in-season decision-making for nitrogen (N) management. Vegetation indices (VIs) derived from satellite imagery can serve as proxies for grain yield and help estimate in-season AONR, enabling timely sidedress applications. This study aimed to (1) quantify how VI–yield relationships vary during the vegetative period across fields with different tillage systems and crop residue; (2) determine whether VI–N response curves can be used to estimate AONR (AONRvi); and (3) assess the accuracy of AONRvi relative to yield-based AONR (AONRy). …

Preliminary Analysis Of Soil Volatile Organic Compounds As Soil Health Indicators, Thorne Taul

Graduate Theses, Dissertations, and Problem Reports (ETD)

Over the past decade, soil health (SH) has gained popularity due to the novelty of sustainable soil use related to human wellbeing. Soil health describes the overall quality of soil and its capacity to function over time. As interest in SH grows, researchers continue to explore new soil health indicators that can improve knowledge on how soil health is assessed and managed. Some indicators directly reflect soil health status, and some indirectly relate to processes and functions occurring within the soil. Volatile organic compounds (VOCs) are naturally occurring compounds that play a role in multiple soil processes. They are associated …

Climate Change Effects On Biomass And Greenhouse Gas Emissions Are Ameliorated By Nontoxic Endophytes In Southeastern Usa Transition Zone Tall Fescue Pastures, Rebecca Kay Mcgrail, Jonathan D. Moore, A. Elizabeth Carlisle, Jim A. Nelson, Rebecca L. Mcculley

Plant and Soil Sciences Faculty Publications

Background: The plant–microbe interaction between tall fescue and its endophyte Epichloë coenophiala can affect ecosystem responses to changing rainfall patterns and increasing temperatures. Endophyte-infected (E+) stands often exhibit improved stress tolerance and differing soil greenhouse gas (GHG) emissions compared to endophyte-free (E−) stands. However, it is unknown if mammalian nontoxic endophyte (NTE) strains introduced into some tall fescue cultivars confer differing stress tolerances or reduce soil GHG emissions.

Methods: We quantified the impact of fescue-NTE symbioses in Jesup and Texoma on biomass and GHG emissions in response to increased temperature (+3°C) and altered precipitation (50% lengthened interval between events) using …

A Global Synthesis Of Fragipan Silicon Concentrations And Relationships With Soil Physicochemical Properties As A Function Of Soil Parent Materials, Christopher Shepard

Plant and Soil Sciences Faculty Publications

Fragipans are dense, brittle subsurface horizons that restrict root growth and limit water-holding capacity. A common factor in these soils is a binding agent, potentially either phyllosilicate clay bridging, amorphous aluminosilicate/silica, or silica sorbed to Fe oxides. Others have suggested that no binding agent is present within these soil horizons and that the arrangement of individual particles is solely responsible for these horizons. In this article, a secondary data synthesis was utilized to demonstrate that silicon (Si) accumulation is a key pedogenic process in loess-derived fragipan horizons, but not in all fragipans. The average dithionite-extractable Si (Si_d) content …

High-Resolution Mapping Of Soil Moisture Variation Using Uas Thermal And Multispectral Imagery, Jackline Amma Timah

Theses and Dissertations

In agricultural landscapes, soil moisture regulates hydrologic partitioning, nutrient transport and water quality, land-atmosphere energy exchange that shapes local climate, and ecosystem resilience. However, traditional monitoring approaches, such as in-situ sensors and satellite imagery, often lack the spatial resolution required to capture fine-scale soil moisture variability. This study evaluated whether unmanned aerial system (UAS)-derived thermal, multispectral, and terrain variables can capture fine-scale spatial variability in volumetric water content (VWC) within an SRB in central Illinois.

High-resolution imagery was collected and paired with 50 field-measured VWC observations. Land surface temperature (LST), vegetation indices (NDVI and NDRE), spectral bands, and slope were …

Impact Of Land Use On Soil Properties, Clay Mineralogy, And Behavior Of Ammonium Across A Precipitation Gradient, Isabel Delamater

Theses and Dissertations--Plant and Soil Sciences

Like soil texture, clay mineralogy is considered a permanent or inherent characteristic of soils reflecting the influence of soil forming factors over long periods of time. Despite the importance of clay mineralogy in providing ecosystem services, much remains unknown about whether land use (native grassland sod versus no-tillage) can modify clay mineralogy under short periods of time. Furthermore, in no-tillage agroecosystems, lower crop yields are often ascribed to immobilization of added N fertilizer where inorganic nitrogen (such as ammonium) is converted to organic nitrogen. The possible role of clay mineralogy in retaining added ammonium has been overlooked in no-tillage systems. …

Impacts Of Burn Severity On The Hydro-Physical, Chemical And Thermal Properties Of Sub-Arctic Peat, Joshua B. Meyer Mr

Theses and Dissertations (Comprehensive)

Under current climate change, summer season in the boreal regions of Canada is becoming increasingly warmer and drier. This shift is driving increases in the frequency and intensity of naturally occurring wildfires and allowing access to areas not normally susceptible to fire such as wetlands. In peatland areas, these increasingly large fires can create complex burn scars, which contain a wide variety of different burn severities across different landcover types. This variety calls for a greater understanding of how varying fire intensity affects the hydro physical, chemical, and thermal characteristics of boreal peat. This study aims to deepen that understanding …

Workshop Outcomes Report: 2nd International Workshop On Seismic Resilience Of Arctic Infrastructure And Social Systems, Majid Ghayoomi, Daniela Morganti

Faculty Publications

The report provides an overview of the second international workshop on Seismic Resilience of Arctic Infrastructure and Social Systems. The report discusses agenda, workshop activities, interdisciplinary working groups, and results. It ends with several strategic questions and investigation plans that were developed as part of the workshop activities.

Last Glacial Maximum And Late Glacial Aeolian Sand Activity, South-Central Indiana, Usa, H. M. Loope, J. L. Antinao, P.R. Hanson, P. M. Jacobs, D. A. Grimley

Conservation and Survey Division: Faculty and Staff Publications

No abstract provided.

Report 17—Revisions To The Articles Of Organization And Procedure Of The Commission On Stratigraphic Nomenclature Of The Americas, Lynn T. Dafoe, Robert B. Macnaughton, Marie-Perre Aubry, Carlton E. Brett, James R. Lehane, Fernando Núñez-Useche, Randall C. Orndorff, Frank Brunton, Lucy E. Edwards, Richard H. Fluegeman, Howard Harper, Robert Matthew Joeckel, Norman P. Lasca, B. H. Tew

Conservation and Survey Division: Faculty and Staff Publications

Several revisions to the Articles of Organization and Procedure for the North American Commission on Stratigraphic Nomenclature have been adopted following the 75th, 79th, and 80th annual meetings of the Commission in 2020, 2024 and 2025, respectively. Of these, the most substantial change was revision of Article III regarding membership composition of the Commission and the addition of new member organizations from Central and South America and the Caribbean region. As a result, the Commission also voted to change its name to be more inclusive of the expanding membership, with approval of the name: Commission on Stratigraphic Nomenclature of the …

Depth And Soil Physical Context Govern Soil Organic Carbon, While Woody Cover Moderates Native Vegetation Relationships In California Rangelands, Dabid Zuniga Garcia

Cal Poly Humboldt theses and projects

Soil organic carbon (SOC) is central to soil function and an important component of climate mitigation in rangeland ecosystems, but the controls on SOC across California’s working rangelands remain understudied. Using data from Point Blue Conservation Science’s Rangeland Monitoring Network, this study evaluated how soil properties, vegetation structure, and recent climate relate to SOC concentration at depths of 0–10 cm and 10–40 cm across 145 ranches spanning four California regions. Linear mixed-effects models showed that SOC was consistently higher in topsoil than subsoil and highest in coastal sites relative to interior valleys. Bulk density was the strongest negative predictor of …

Below The Rows, Beyond The Roots: An Art Exhibition Depicting Agriculture Across The Globe, Maggie Enoch

Honors Theses and Capstones

In Below the Rows, Beyond the Roots, artist Maggie Enoch creates multimedia works inspired by her exposure to diverse agricultural systems and perspectives while studying geography and sustainable agriculture/food systems around the world. By integrating complex histories with the contemporary realities of farming, Maggie paints vivid pictures of the power of food in this five-piece exhibition.

Experiences Of Bukidnon Farmers On The Use Of Carbonized Rice Hulls (Crh) Waste From Biomass Boilers As A Soil Conditioner, Dash Constantine S. Chamen, Queen Loraine D. Ban, Michael Justin O. Eluna, Pole Honson B. Gabitano, Ian Jay P. Saldo, Jhovel Roy D. Calo

Sinaya: A Philippine Journal for Senior High School Teachers and Students

The long-term use of agricultural products that adversely affect soil is a significant issue for farmers. This study explored the potential of carbonized rice hulls (CRH) waste from biomass boilers as a sustainable soil conditioner. The research investigated the specific soil conditioning properties of CRH and explored the lived experiences of nine (9) Bukidnon farmers to correlate their observations with the material’s chemical profile. The composition analysis identified a high silica content and essential micronutrients, such as calcium and magnesium, which act as nutrient restorers and pH regulators. The thematic analysis of semi-structured interviews, four themes emerged to summarize the …

The Effect Of Phosphate Fertilizer And Organic Matter On Phosphorus Status, Ph, And Cabbage Yield In Andisols, Mahfud Arifin, Emma Trinurani Sofyan, Anni Yuniarti, Rina Devnita, Sastrika Anindita

Jurnal Kultivasi

Andisols are characterized by high phosphorus (P) retention, which often limits P availability for crops. This study aimed to analyze the independent and interactive effects of P fertilizer and organic matter (i.e. manure and rice straw compost) on P retention, total P, available P, P uptake, soil pH, and cabbage yield. This research was conducted in pot experiments in plastic house, applying P fertilizer (0, 90, 180, 270 kg ha-1) and organic matter (20 kg ha-1 of chicken, sheep, cow manures and rice straw compost) on Andisols planted with cabbage. The experiment used a factorial randomized design. The results showed …

The Effects Of Nanobubble Fertigation And Soil Conditioners To Improve Nutrient Dynamics, Soil Microbial Activity, And Chili Productivity, Betty Natalie Fitriatin, Euis Ahah Rokayah, Elsa Naila Elmyra, Tualar Simarmata, Nicky Oktav Fauziah, Hanif Fakhrurroja

Jurnal Kultivasi

Drip fertigation is a fertilization method that integrates nutrient delivery with an irrigation system, which is capable of optimizing the direct delivery of nutrients to the root zone. This experiment aims to investigate the effect of drip fertigation with nanobubble technology, and soil conditioners on the population of Phosphate-Solubilizing Bacteria (PSB) and Azotobacter spp., available phosphorus, total nitrogen, growth, and yield of red chili. The study used a Strip Plot Design with two factors and three replications. The first factor was nutrient application (solid NPK fertilizing as control; drip fertigation; and drip fertigation with nanobubble technology), and the second factor …

What Limits Dryland Ecosystems? Patterns Of Soil Fertility And Resource Limitation In The Chihuahuan Desert, Dylan Stover

Open Access Theses & Dissertations

Human activities are substantially altering global resource cycles with widespread implications for biogeochemistry and ecosystem functioning globally. Drylands, regions where precipitation is outweighed by water losses, are especially sensitive to these large shifts in resource cycles due to their inherently low and variable resource availability. In these regions, resource availability and biological activity are often concentrated around plants – or fertile islands – and predominantly driven by pulses of water. However, our knowledge of the processes influencing biological productivity in drylands – patterns of soil fertility and resource limitation – remains lacking, and their unique biogeochemical and biological processes create …

Essays On The Economics Of Farmland Valuation And Investment In U.S. Agriculture, Colson Tester

Graduate Theses and Dissertations

This dissertation presents three empirical essays that collectively advance the understanding of farmland valuation in key U.S. agricultural regions, emphasizing the critical advantages of comprehensive, transaction-based data over traditional survey methods. Farmland represents a significant portion of agricultural wealth, and its accurate valuation is crucial for farmers, investors, and policymakers, influencing everything from credit access to investment strategies. Historically, research has often relied on subjective survey data, which can suffer from biases, inaccuracies, and insufficient granularity. This dissertation addresses these limitations by leveraging extensive datasets of arm’s-length farmland transactions, offering a more precise and market-driven perspective on land values. The …

Evaluating Utilidor Performance And Ground Temperature Variability In UtqiaġVik, Tate Rachow

Geosciences

Permafrost degradation in Arctic regions poses increasing risks to infrastructure as climate warming accelerates thaw processes, alters hydrology, and deepens the active layer. In Utqiaġvik, Alaska, utilidors— utility conduits—play a vital role in protecting water and wastewater services, yet their thermal performance under changing conditions remains poorly constrained. This thesis evaluates the thermal behavior of the Site U-1 direct buried pipes on Stevenson Street using historical thermistor resistance data converted to temperature, combined with calibrated two- dimensional TEMP/W numerical models. The models incorporate layered backfill materials and polyurethane insulation, while also simulating operational influences of water and wastewater temperatures. Calibration …

Soil Characterization With Proximal Geophysics, Sophia M. Becker

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

High quality soil data is crucial for addressing numerous threats to human well-being such as water scarcity, food insecurity, and intensified natural disasters. True soil property values are determined by analyzing soil samples in a laboratory, but soil sampling is often expensive and time-consuming. Some in-field point sensors and remote sensing products are available to measure soil properties, but they have inherent limitations in measurement extent and resolution. Geophysical methods can fill the measurement scale gap between point measurements and remote sensing products, but various research questions remain open. This dissertation aims to advance understanding of geophysics-derived soil property measurements …

Assessing Crop Rotation Productivity, Soil Health, And Fertility, And Economic Performance, To Enhance Semi-Arid High Plains Cropping Systems Sustainability, Ezequiel Maria Villamil

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Sustainable crop production in the semi-arid High Plains of Nebraska faces challenges from limited precipitation, high interannual variability, and economic risk. This dissertation investigates the long-term productivity, water use, soil health, and economic sustainability of dryland crop rotations, with emphasis on the role of pulses as alternatives to fallow.

Chapter 1 analyzes nearly three decades (1995–2023) of on-farm data from the High Plains Agricultural Laboratory (Sidney, Nebraska) to compare seven crop rotations, including wheat, corn, millet, sunflower, and field peas. Results showed that wheat–corn–fallow (W–C–F) consistently outperformed traditional wheat–fallow (W–F) and more intensified four-year rotations, providing the highest grain yields, …

Increasing Soil Health In Zero-Grade, Flood-Irrigated Rice In Eastern Arkansas, Hannah Elizabeth Vickmark

Graduate Theses and Dissertations

In an effort to build and maintain soil health and sequester soil C, many producers and researchers are turning towards regenerative management practices in agricultural systems, such as reduced tillage or no-tillage (NT), the implementation of winter cover crops (CC), and the use of organic or green manures, such as biochar. However, little research is being conducted on the long-term soil health and agronomic benefits of these practices in a flood-irrigated rice (Oryza sativa L.) production system. Three replications of seven treatment combinations were applied to 6.1 x 30.5 m rice plots. Baseline soil health properties were quantified at six …

Evaluating Fall And Spring Planted Cover Crops For Integrated Management Of Herbicide Resistant Palmer Amaranth And Effect On Soil Health, Vipin Kumar

Dissertations and Doctoral Documents, University of Nebraska-Lincoln, 2023–

Herbicide-resistant Palmer amaranth (Amaranthus palmeri S. Watson) pose a severe threat to agronomic crop productivity in the United States, including corn and soybean production in Nebraska. Therefore, there is an urgent need for diversified and sustainable management approaches. Integrating cover crops (CCs) with herbicide programs represents a promising strategy to achieve Palmer amaranth suppression, sustain crop yields, and contribute to long-term soil health in irrigated corn–soybean production systems in Nebraska.

A meta-analysis of 41 studies and 595 paired observations demonstrated that CCs reduced Amaranthus spp. density and biomass by 37–59% depending on the growing season, with grasses and mixtures …