Soil Science Commons^™

Controls On The Presence, Concentration, Storage, And Variability Of Soil Inorganic Carbon In A Semi-Arid Watershed, Christopher Allen Stanbery

Boise State University Theses and Dissertations

Soil inorganic carbon (SIC) constitutes approximately 40% of terrestrial soil carbon and is an integral part of the global carbon cycle; however, the controls on the storage and flux of inorganic carbon are poorly understood. Soil forming factors controlling SIC storage and flux include climate, organisms, relief, parent material, and time (Jenny, 1941). Rainfall is a primary factor controlling SIC accumulation in arid and semi-arid regions, but the hierarchy of controls on SIC development is complex. The Reynolds Creek Experimental Watershed in southwestern Idaho is an ideal location to study factors influencing SIC, as the carbon pool transitions from predominately …

Growth Of Methanogens In The Presence Of Perchlorate Salts: A Study For Possible Life On Mars, John Cale

Biological Sciences Undergraduate Honors Theses

The Phoenix Lander collected soil samples from Mars, and it detected perchlorate salts in its analysis [1]. As oxidizing agents, perchlorates pose a threat to the hypothesis that there may be microbial life on Mars. Since Mars is very dry, perchlorate may continue to accumulate in the soil. If anaerobic methanogens inhabit Mars, then they must be able to grow in the presence of perchlorate salts. There were four species of methanogens tested in this project. The methanogens were first exposed to small concentrations of calcium perchlorate, and then they were gradually tested at higher concentrations. Growth was measured by …

The Development And Evaluation Of Lecture Tutorials For Introductory Soil Science, Judith K. Turk

Conservation and Survey Division: Faculty and Staff Publications

The wide-array of concepts from the natural sciences that must be mastered to succeed in an introductory soil science course presents a significant challenge to students. This study was conducted to determine if students’ conceptual development regarding topics in introductory soil science could be improved by using lecture tutorials. Lecture tutorials are activities that students complete following a lecture. They guide the students to critically analyze their understanding of a concept presented in the lecture. Eight lecture tutorials were written and evaluated using pre/post quizzes and surveys in two courses (an environmental science program course and a general studies course). …

Examining Denitrification In Agricultural Ditch Sediments Vegetated With Rice Cutgrass (Leersia Oryzoides): Modeling Seasonal Variation Across Increasing Levels Of Nitrate Loading And Model Application To Pre-Existing Datasets, Shannon Lee Speir

Graduate Theses and Dissertations

Nitrogen (N) derived from fertilizer application in agricultural systems may contribute to significant environmental impacts, including eutrophication of fresh and coastal waters. Rice cutgrass (Leersia oryzoides) can significantly enhance denitrification potential in agricultural ditch sediments, but relationships with known drivers are not well understood. To address this, I examined effects of nitrate (NO3-) availability on dinitrogen gas (N2) and NO3- fluxes seasonally in Chapter 2. Denitrification rates were measured as N2 flux from intact vegetated sediment cores using Membrane Inlet Mass Spectrometry (MIMS). Michaelis-Menten models were developed from observations to mathematically describe N2 fluxes across the spring, summer, and fall …

Soil And Plant Property Differences Among High-Yield Soybean Areas In Arkansas, Taylor Cass Adams

Graduate Theses and Dissertations

Continued achievement of soybean [Glycine max (L.) Merr.] yields greater than 6719 kg ha-1 (100 bu ac-1) will depend on decreasing the yield gap, which is contingent on gathering more information regarding the soil physical, chemical, and microbiological environment and the main plant factors contributing to high-yield soybean. Therefore, understanding the main factor differences between high- and average-yield areas may provide insight for making management decisions to increase yields. The objectives of this study were i) to evaluate the effects of region and soil depth on soil property differences between high- and average-soybean-yielding areas, ii) to determine which soil properties …

Simple Soil Quality Tests And Organic Management Practices For Orchards In The Intermountain West, Esther Oline Thomsen

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

Soil health is often overlooked as a long-term management strategy as growers face an increasing number of short-term management challenges in the Intermountain West. The costs of inputs are rising and water resources are becoming more limited. Soil with poor health typically requires more amendments and fertlizers to meet crop needs. Soil health tests can help reveal management practices that reduce soil health, as well as those that improve soil health. Practices known to improve soil health are reduced to no tillage, cover crop use- especially legumes, and addition of mulch and other organic materials. Soil health testing is not …

Adjustment And Optimization Of The Cropping Systems Under Water Constraint, Pingli An, Wei Ren, Xiliin Liu, Mengmei Song, Xuemin Li

Plant and Soil Sciences Faculty Publications

The water constraint on agricultural production receives growing concern with the increasingly sharp contradiction between demand and supply of water resources. How to mitigate and adapt to potential water constraint is one of the key issues for ensuring food security and achieving sustainable agriculture in the context of climate change. It has been suggested that adjustment and optimization of cropping systems could be an effective measure to improve water management and ensure food security. However, a knowledge gap still exists in how to quantify potential water constraint and how to select appropriate cropping systems. Here, we proposed a concept of …

Predicting Post-Fire Change In West Virginia, Usa From Remotely-Sensed Data, Michael Strager P. Strager, Melissa Thomas-Van Gundy, Aaron E. Maxwell

Journal of Geospatial Applications in Natural Resources

Prescribed burning is used in West Virginia, USA to return the important disturbance process of fire to oak and oak-pine forests. Species composition and structure are often the main goals for re-establishing fire with less emphasis on fuel reduction or reducing catastrophic wildfire. In planning prescribed fires land managers could benefit from the ability to predict mortality to overstory trees. In this study, wildfires and prescribed fires in West Virginia were examined to determine if specific landscape and terrain characteristics were associated with patches of high/moderate post-fire change. Using the ensemble machine learning approach of Random Forest, we determined that …

Landform Mapping Of The Clarks River Alluvial System Using Lidar Dems, Benedict W. Ferguson

Scholars Week

The Clarks River is located in western Kentucky near the city of Benton. It travels through and weathers lacustrine or lake deposits as well as fluvial or river deposits. These deposits are also overlain by loess deposited from the last glacial maximum. Historically, people have taken advantage of these rich deposits for agriculture which has led to increased settlement. With increased settlement, the river has experienced alteration. The west fork of the Clarks River has been channelized while the east fork of the Clarks River has managed to remain un-channelized and has since been allowed to run relatively freely.

Detailed …

Mapping The Variability Of Soil Quality Indicators In Natural Versus Agricultural Ecosystems, Mary G. Derting Miss

Scholars Week

Traditionally, Kentucky agriculture has focused on crop production and soil fertility while overlooking soil quality and its dependence on land management type. This research attempted to reveal the importance of land management types and their individual effects on physical soil quality indicators. The second objective of this study was to show the variance of physical soil quality indicators across different land managements by using layered maps. Such visual representation of the data along with statistical analysis also showed which soil quality parameters are more sensitive to change in land management type. Land management types included three undisturbed grassland and undisturbed …

Tungstate (Vi) Sorption On Hematite: An In Situ Atr-Ftir Probe On The Mechanism, Sudipta Rakshit, Bryan Sallman, Athénais Davantés, Grégory Lefèvre

Agricultural and Environmental Sciences Faculty Research

Owing to the suspected toxicity and carcinogenicity of tungstate (VI) oxyanions [i.e. mono tungstate and several polytungstate, generally represented by W (VI)], the environmental fate of W (VI) has been widely studied. Sorption is regarded as a major mechanism by which W (VI) species are retained in the solid/water interface. Iron (hydr)oxides have been considered important environmental sinks for W (VI) species. Here we report sorption mechanisms of W (VI) on a common iron oxide mineral-hematite under environmentally relevant solution properties using in situ attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopic probes. Initial W (VI) loadings varied from 10 …

Identifying Soil Constraints That Limit Wheat Yield In The South-West Of Western Australia, Dennis Van Gool

Resource management technical reports

Wheat is grown on about 18 million hectares in the South-West Agricultural Region of Western Australia from north and east of Geraldton to Esperance in the south-east. Yields are frequently constrained by a range of soil factors.

This report uses existing conventional soil-landscape mapping to analyse the effects of 17 known soil constraints that limit crop production and roughly prioritises the areas where they occur.

Traditional land capability maps are prepared using a most-limiting factor approach, which assumes that ameliorating the most limiting constraint will result in a yield increase until the next most-limiting constraint is reached. Where there are …

Silica Uptake And Release In Live And Decaying Biomass In A Northern Hardwood Forest, Wim Clymans, Daniel J. Conley, John J. Battles, Patrick J. Frings, Mary Margaret Koppers, Gene E. Likens, Chris E. Johnson

Civil and Environmental Engineering - All Scholarship

In terrestrial ecosystems, a large portion (20–80%) of the dissolved Si (DSi) in soil solution has passed through vegetation. While the importance of this “terrestrial Si filter” is generally accepted, few data exist on the pools and fluxes of Si in forest vegetation and the rate of release of Si from decomposing plant tissues. We quantified the pools and fluxes of Si through vegetation and coarse woody debris (CWD) in a northern hardwood forest ecosystem (Watershed 6, W6) at the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, USA. Previous work suggested that the decomposition of CWD may have significantly …

Identifying Soil Constraints That Limit Wheat Yield In The South-West Of Western Australia, Dennis Van Gool

Resource management technical reports

This is a novel approach using regional-scale information. The analysis estimated that:

• most of the wheat-growing land in south-west WA has one or more soil constraints
• about 1.6 million hectares (9% of the total area) are not suitable for cropping
• about 2.2 million hectares (12% of the total area) are suitable for cropping but are subject to many (more than 3) constraints; soil amelioration is unlikely to significantly improve profitable yield gain
• subsurface acidity extends over 12.6 million hectares (about 70% of the total area); about 7.6 million hectares of that area (42% of the total area) is estimated to …

Identifying Groundwater - Dependent Wetlands Of The Broome Sandstone Aquifer In The La Grange Groundwater Area, Nicholas Wright, Richard J. George Dr, Robert Paul, Paul Raper

Resource management technical reports

This report identifies wetlands that are likely to be dependent on the Broome Sandstone aquifer within the La Grange groundwater allocation area. The Broome Sandstone aquifer is the dominant groundwater resource in the area. With potential agricultural growth of this area, it is necessary to understand, monitor and manage the aquifer and its dependent wetlands. This report describes how we created a watertable surface that was used to identify wetlands and to determine which of the previously mapped wetlands are likely to be sourced from the Broome Sandstone aquifer. A watertable surface was created from 148 points taken from bore …

Sensitivity Of Seven Diverse Species To Blue And Green Light: Interactions With Photon Flux, Michael Chase Snowden, Bruce Bugbee, Kevin R. Cope

Plants, Soils, and Climate Faculty Publications

Despite decades of research, the effects of spectral quality on plant growth, and development are not well understood. Much of our current understanding comes from studies with daily integrated light levels that are less than 10% of summer sunlight thus making it difficult to characterize interactions between light quality and quantity. Several studies have reported that growth is increased under fluorescent lamps compared to mixtures of wavelengths from LEDs. Conclusions regarding the effect of green light fraction range from detrimental to beneficial. Here we report the effects of eight blue and green light fractions at two photosynthetic photon fluxes (PPF; …

Soil Salinity Increases The Tolerance Of Excessive Sulfur Fumigation Stress In Tomato Plants, Yuping Jiang, Xiaotao Ding, Dong Zhang, Qi Deng, Chih-Li Yu, Suping Zhou, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

To investigate the responses of plant photosynthesis and chlorophyll fluorescence to excessive sulfur fumigation stress (Sulfur) alleviated by pre-treated salt in the soil (Salt), seedlings of a tomato cultivar (Solanum lycopersicum L. ‘Money Maker’) were exposed to the Sulfur with or without the Salt treatment for 15h. Leaf fresh weight, dry weight, chlorophyll (Chl) content, carotenoid (Car) content, photosynthesis and chlorophyll fluorescence parameters were measured. The results showed that the Sulfur treatment significantly decreased leaf fresh weight, dry weight, Chl and Car contents, net photosynthetic rate (Pn), stomatal conductance (Gs), transpiration rate (Tr), maximum quantum efficiency of photosystem II (PSII) …

Multi-Sector Analysis Of The Progress And Challenges Of Soil-Transmitted Helminth Eradication In Rural Udaipur, Jessica Ellis

Independent Study Project (ISP) Collection

India is home to 240 million children currently at risk of Soil-Transmitted Helminthiasis, which is spread via unclean water, soil, and food, and causes acute pain and malnutrition. While acknowledging the research debates over WASH and mass drug administration, this study seeks to identify the systemic multidisciplinary issues affecting STH elimination efforts in rural Udaipur. Twenty-three interviews were conducted in villages, government departments, NGOs, and medical sectors to identify the challenges within each approach to deworming, and their experiences with multi-sectoral collaboration. The most recurring issues across disciplines were need for invested local leadership, increase in health literacy of adults, …

Comparative Transcriptomic Analysis Of Two Brassica Napus Near-Isogenic Lines Reveals A Network Of Genes That Influences Seed Oil Accumulation, Jingxue Wang, Sanjay Kumar Singh, Chunfang Du, Chen Li, Jianchun Fan, Sitakanta Pattanaik, Ling Yuan

Plant and Soil Sciences Faculty Publications

Rapeseed (Brassica napus) is an important oil seed crop, providing more than 13% of the world’s supply of edible oils. An in-depth knowledge of the gene network involved in biosynthesis and accumulation of seed oil is critical for the improvement of B. napus. Using available genomic and transcriptomic resources, we identified 1,750 acyl-lipid metabolism (ALM) genes that are distributed over 19 chromosomes in the B. napus genome. B. rapa and B. oleracea, two diploid progenitors of B. napus, contributed almost equally to the ALM genes. Genome collinearity analysis demonstrated that the majority of the …

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …

Vasoactivity And Vasoconstriction Changes In Cattle Related To Time Off Toxic Endophyte-Infected Tall Fescue, James L. Klotz, Glen E. Aiken, Jessica R. Bussard, Andrew P. Foote, David L. Harmon, Ben M. Goff, F. Neal Schrick, James R. Strickland

Plant and Soil Sciences Faculty Publications

Previous research has indicated that serotonergic and α-adrenergic receptors in peripheral vasculature are affected by exposure of cattle grazing toxic endophyte-infected (E+; Epichlöe coenophialia) tall fescue (Lolium arundinaceum). The objective of this experiment was to determine the period of time necessary for the vascular effects of ergot alkaloids to subside. Two experiments were conducted to investigate changes in vascular contractile response and vasoconstriction over time relative to removal from an ergot alkaloid-containing E+ tall fescue pasture. In Experiment 1, lateral saphenous vein biopsies were conducted on 21 predominantly Angus steers (357 ± 3 kg body weight) at …

Methane Emissions From Global Rice Fields: Magnitude, Spatiotemporal Patterns, And Environmental Controls, Bowen Zhang, Hanqin Tian, Wei Ren, Bo Tao, Chaoqun Lu, Jia Yang, Kamaljit Banger, Shufen Pan

Plant and Soil Sciences Faculty Publications

Given the importance of the potential positive feedback between methane (CH₄) emissions and climate change, it is critical to accurately estimate the magnitude and spatiotemporal patterns of CH₄ emissions from global rice fields and better understand the underlying determinants governing the emissions. Here we used a coupled biogeochemical model in combination with satellite-derived contemporary inundation area to quantify the magnitude and spatiotemporal variation of CH₄ emissions from global rice fields and attribute the environmental controls of CH₄ emissions during 1901–2010. Our study estimated that CH₄ emissions from global rice fields varied from 18.3 ± …

Quantifying Peat Carbon Accumulation In Alaska Using A Process-Based Biogeochemistry Model, Sirui Wang, Qianlai Zhuang, Zicheng Yu, Scott Bridgham, Jason K. Keller

Education Faculty Articles and Research

This study uses an integrated modeling framework that couples the dynamics of hydrology, soil thermal regime, and ecosystem carbon and nitrogen to quantify the long-term peat carbon accumulation in Alaska during the Holocene. Modeled hydrology, soil thermal regime, carbon pools and fluxes, and methane emissions are evaluated using observation data at several peatland sites in Minnesota, Alaska, and Canada. The model is then applied for a 10,000 year (15 ka to 5 ka; 1 ka = 1000 cal years before present) simulation at four peatland sites. We find that model simulations match the observed carbon accumulation rates at fen sites …

Modeling PCo2 Variability In The Gulf Of Mexico, Zuo Xue, Ruoying He, Katja Fennel, Wei-Jun Cai, Steven Lohrenz, Wei-Jen Huang, Hanqin Tian, Wei Ren, Zhengchen Zang

Plant and Soil Sciences Faculty Publications

A three-dimensional coupled physical–biogeochemical model was used to simulate and examine temporal and spatial variability of sea surface pCO₂ in the Gulf of Mexico (GoM). The model was driven by realistic atmospheric forcing, open boundary conditions from a data-assimilative global ocean circulation model, and observed freshwater and terrestrial nutrient and carbon input from major rivers. A 7-year model hindcast (2004–2010) was performed and validated against ship measurements. Model results revealed clear seasonality in surface pCO₂ and were used to estimate carbon budgets in the Gulf. Based on the average of model simulations, the GoM was a …

Bulletin No. 42: The Mamacoke Conservation Area, Glenn Dreyer, Robert Askins, Scott Peterson

Bulletins

No abstract provided.

Identifying And Addressing Soil Property Issues Affecting Roadside Vegetation Establishment, Xu Li, Martha Mamo, Walter H. Schacht, Tala Awada, Humberto Blanco-Canqui

Nebraska Department of Transportation: Research Reports

Attaining adequate vegetation cover along highways is important for NDOR to comply with EPA’s stormwater regulations. However, low plant cover is a common problem on shoulders (first 16 feet off the pavement) of many highways in Nebraska. The ultimate goal of this study is to identify cost-effective engineering solutions that assure adequate seed beds (i.e., soil conditions) for establishment of selected seeding mixtures. The objectives of this study are to (1) characterize the soil properties along roadsides where vegetation stands have not developed well, and (2) verify the effects of select soil property parameters on plant germination and establishment.

Sampling …

Regulation Of Pyrroloquinoline Quinone-Dependent Glucose Dehydrogenase Activity In The Model Rhizosphere-Dwelling Bacterium Pseudomonas Putida Kt2440, Ran An, Luke Moe

Plant and Soil Sciences Faculty Publications

Soil-dwelling microbes solubilize mineral phosphates by secreting gluconic acid, which is produced from glucose by a periplasmic glucose dehydrogenase (GDH) that requires pyrroloquinoline quinone (PQQ) as a redox coenzyme. While GDH-dependent phosphate solubilization has been observed in numerous bacteria, little is known concerning the mechanism by which this process is regulated. Here we use the model rhizosphere-dwelling bacterium Pseudomonas putida KT2440 to explore GDH activity and PQQ synthesis, as well as gene expression of the GDH-encoding gene (gcd) and PQQ biosynthesis genes (pqq operon) while under different growth conditions. We also use reverse transcription-PCR to identify transcripts …

Validation Of N-Star Nitrogen Rate Recommendations And Evaluation Of N-Star Soil Sampling Procedures For Clay Soils In Arkansas, Jarom Thane Davidson

Graduate Theses and Dissertations

The two methods for determining N-fertilizer recommendations for rice (Oryza sativa L.) in Arkansas are the standard N recommendation (SR) based on soil texture, previous crop, and rice cultivar, and the Nitrogen-Soil Test for Rice (N-STaR) which quantifies the potentially mineralizable-N of the soil and provides a site-specific N recommendation. The N-STaR program has recently been developed, and the validation of N-STaR for clay soils is an important step in ensuring that N-STaR predicts correct N-fertilizer rates for rice under a delayed-flood production system. Small-plot trials located across Arkansas compared the N-STaR 95 and 100% relative grain yield (RGY) N …

Understanding Variability In Crop Response To Fertilizer And Amendments In Sub-Saharan Africa, Job Kihara, Generose Nziguheba, Shamie Zingore, Adama Coulibaly, Anthony Esilaba, Vernon Kabambe, Samuel Njoroge, Cheryl Palm, Jeroen Huising

All Peer-Reviewed Publications

Improved understanding of soil fertility factors limiting crop productivity is important to develop appropriate soil and nutrient management recommendations in sub-Saharan Africa. Diagnostic trials were implemented in Kenya, Malawi, Mali, Nigeria and Tanzania, as part of the African Soils Information Service (AfSIS) project, to identify soil fertility constraints to crop production across various cropping systems and soil fertility conditions. In each country, one to three sites of 10 km × 10 km were included with each site having 12-31 field trials. The treatments tested included a control, an NPK treatment, three treatments in which the N, P and K nutrients …

Determination Of Optimum Fall And Spring Nitrogen Fertilizer Rate For Maximizing Grain Yield Of Soft Red Winter Wheat Sown At Variable Planting Dates, Lucas Vasconcelos Vieira

Graduate Theses and Dissertations

An optimum planting date is important for winter wheat nitrogen (N) management as it dramatically changes the growing environment including temperature and moisture, ultimately affecting fertilizer efficiency and grain yield (GY). In Arkansas, high precipitation in the fall often forces farmers to delay planting and current Arkansas recommendations include the application of fall N when soft red winter wheat (SRWW) is sown later than optimum, despite the lack of data supporting this practice. This study evaluated the effect of rate and timing of N application on GY of SRWW sown at variable planting dates in Arkansas. Granular urea was split …