Earth Sciences Commons^™

End-To-End Modeling For The Ross Sea Region Marine Protected Area: A Review Of Available Tools For Conservation Objectives, James R. Lovvorn, Cara Nissen, Alexis A. Bahl, Erik Behrens, Cassandra M. Brooks, Katy Christensen, Michael S. Dinniman, Lilian A. Dove, Alice K. Duvivier, Eileen E. Hofmann, Hayley Kwasniewski, Young Shin Kwon, Sharon E. Stammerjohn, Lei Xing

CCPO Publications

The challenge of protecting marine ecosystems, including biodiversity and manifold interactions in changing environments, has encouraged development of end-to-end models linking physical drivers through entire food webs to upper-level predators. Ideally such models should have temporal and spatial resolution adequate to capture important small-scale processes, while including scales large enough to encompass local food webs and movements of wide-ranging consumers. The need for component submodels to be manipulated and upgraded independently by scientists from different disciplines, and used selectively depending on questions addressed, favors modular structure allowing linkage of different submodels with varying strengths and weaknesses. As an example, this …

Basal Melting Variability Of The Ross Ice Shelf From Mixing Ratios Of Simulated Water Masses (1993-2018) And Potential Climatic Drivers, Enrico Pochini, Andrea Bergamasco, Florence Colleoni, Manuel Bensi, Giorgio Budillon, Pasquale Castagno, Michael S. Dinniman, Pierpaolo Falco, Emanuele Forte, Vedrana Kovačević, Stefanie L. Mack

CCPO Publications

Several water masses circulate under the Ross Ice Shelf (RIS), the largest ice shelf in Antarctica, each causing basal melting with a specific spatio-temporal pattern. To investigate these patterns and their variability, we applied a mixing ratio analysis to simulated water masses from a new numerical ocean model of the Ross Sea. The simulation, which was run over 26 years (1993–2018) and which includes the RIS cavity, shows good agreement with seaborne and mooring observations. The total RIS basal melt rate is 90 Gt/yr on average, and is caused mostly by High Salinity Shelf Water (HSSW) (68%), which enters the …

Regional Oceanographic Controls On Water Column Nitrogen Fixation In Northern Australian Waters, Douglas G. Capone, Ajit Subramaniam, Yubin Raut, Joseph P. Montoya, Margaret R. Mulholland, Rachel Ann Foster, Miles Furnas, Edward J. Carpenter

OES Faculty Publications

Large blooms of the diazotrophic cyanobacteria, Trichodesmium, have been re-ported along the north coast of Australia and are readily evident in remote sensing images. During a research cruise in November 1999, we sampled from Townsville to Broome, examined Trichodesmium population densities and their rates of carbon and N₂ fixation alongside microscopy-based cell counts of them and other cyanobacte-rial diazotrophs. Additionally, we also enumerated the picophytoplankton community using flow-cytometry, measured bulk chlorophyll concentrations, carbon and N₂ fixation rates, and water column hydrography, enabling comparison of diazotrophic and picophytoplankton functional groups across the system. Agglomerative hierarchical clustering analysis of physicochemical oceanographic …

Differential Growth Dynamics Of Common Salt Marsh Species Spartina Alterniflora And Juncus Roemerianus Under Varied Sediment Amendments, Caitlin Hemphill, Richard P. Hale, Erik S. Yando

Biological Sciences Faculty Publications

Introduction

Many coastal wetlands are at high risk of degradation or loss due to sea‐level rise. Restoration techniques for maintaining coastal marshes are paramount, with thin‐layer placement (TLP) emerging as one feasible solution. Despite TLP's utilization, additional research is needed on species‐ and sediment‐specific responses.

Objectives

Our research combines greenhouse and field experimentation to test species and sediment composition responses aimed at maximizing vegetation while maintaining increased elevation.

Methods

The greenhouse experiment used two common marsh plants, Spartina alterniflora and Juncus roemarianus. Five centimeters of sediment (mud, sand, and sand/mud mix) was added, and subsequent sediment and vegetation metrics …

Forecasting Precipitation In Cuba Using Graph Based Deep Learning, Taufiqul Islam

Earth & Environmental Sciences Theses

Daily precipitation forecasting remained a challenging problem in regions characterized by strong spatial heterogeneity, nonlinear atmospheric dynamics, and intermittent rainfall behavior. Cuba represented a particularly complex case due to the combined influence of tropical cyclones, easterly waves, mesoscale convective systems, and orographic effects, which produced highly variable rainfall patterns in both space and time. Conventional statistical and machine-learning models typically treated stations independently and therefore overlooked spatial dependencies that strongly influenced rainfall variability across the island.

This study developed a spatiotemporal deep-learning framework for daily precipitation forecasting across 40 spatial nodes in Cuba using data from 1979 to 2023. The …

Investigation Of Reey Concentrations In Argillaceous Rocks Associated With Coal Beds In Southwestern West Virginia, Alyssa Cameron Long

Theses, Dissertations and Capstones

Rare earth elements (REEs) and Yttrium are classified as “critical minerals” that are used in many industries and are typically extracted from carbonatites and related alkaline plutonic rocks. The limited availability of REE+Y requires finding alternate sources such as coal fly ash, tonstein, fireclays, and shales. This study investigates the potential enrichment of shales, fireclays, and siltstones interbedded with coal from southwestern WV in REEY, and the mechanisms of such enrichment. Using ICP-AES analysis of various rock types shows that shales, silty shales, and siderite nodules interbedded with Fire Clay and Chilton Coal beds in the Kanawha Formation record the …

Constraining The Tectono-Climatic Evolution Of The Northern Rocky Mountains: Insights From Volcanic Glass, Leaf Water, And Leaf Wax Hydrogen Isotopes, Rijumon Nandy

Earth & Environmental Sciences Dissertations

The Eocene-Oligocene period in the North American Cordillera represents a period of great intrigue with complex interactions among tectonics, climate, and surface processes. Although this period is generally associated with synorogenic extension associated with gravitational collapse of the Cordillera, the paleotopographic history remains debated. Existing studies offer conflicting interpretations, suggesting either sustained elevations or modest uplift during this time. Notably, recent reconstructions based on volcanic glass δD values have proposed renewed uplift during the early Oligocene, which needs to be tested with a more extensive and robust dataset. Concurrently, global cooling and aridification during this interval may have been amplified …

Characterization Of Phytoplankton-Excreted Metabolites Mediating Carbon Flux Through The Surface Ocean, Yuting Zhu, Hanna S. Anderson, Eli Salcedo, Samuel E. Miller, Krista Longnecker, Melissa C. Kido Soule, Sheean T. Haley, Gretchen J. Swarr, Rogier Braakman, Sonya T. Dyhrman, Elizabeth B. Kujawinski

Chemistry & Biochemistry Faculty Publications

The marine labile dissolved organic carbon (DOC) pool is a dynamic reservoir of thousands of molecules that cycles approximately one-quarter of Earth’s primary production within days to weeks. After excretion by phytoplankton and other microbes, metabolites are rapidly consumed, resulting in low standing concentrations (picomolar to low nanomolar). Despite the decades-long search for labile DOC sources and molecular identities, marine phytoplankton exometabolomes are not well characterized, largely due to difficulties in measuring small polar molecules in saline water. Here, we profiled the exometabolomes of six axenic phytoplankton species representing key functional groups including a diatom (Thalassiosira pseudonana CCMP1335), a …

Nonpyrogenic "Black" Nitrogen Likely Plays A Major Yet Underrecognized Role In The Global Nitrogen Cycle, João Vitor Dos Santos, Aleksandar I. Goranov, Kyle M. Lambert, Theodoro Da Rosa Salles, Susan J. Carter, Ann Pearson, Patrick G. Hatcher

Chemistry & Biochemistry Faculty Publications

Condensed aromatic nitrogen (ConAN) is commonly found in soil and aquatic environments. ConAN is broadly viewed by the biogeochemistry community as a combustion-derived product leading to its frequent designation as pyrogenic “black” nitrogen. Here, we provide evidence that ConAN can also form through nonpyrogenic pathways. In an experiment simulating biomass oxidation, pine wood boards assembled with iron nails were exposed to 12 years of natural environmental conditions. Nitrogen concentrations increased from 0.2 to 1.2 wt % with increasing proximity to the nail. Ultrahigh resolution mass spectrometry showed enrichment of nitrogen-containing compounds within the lignin and condensed aromatic domains. X-ray spectroscopic …

Land Use Influences Dissolved Organic Matter Composition In The U.S. Coastal Critical Zone Network, Aleksandar I. Goranov, Elizabeth V. Whitney, Brian R. Moyer, Katherine L. Tully, Patrick G. Hatcher, Yu-Ping Chhin

Chemistry & Biochemistry Faculty Publications

Coastal watersheds are highly productive biogeochemical systems supporting robust coastal fisheries and contributing significantly to the marine gross primary production flux. These ecosystems are comprised of civil infrastructure, farms, forests, and marshes, and their diversity is reflected in the quantity and quality of dissolved organic matter (DOM). Here, we assess the role of farming in influencing DOM from surface waters of six coastal tidal creeks adjacent to forest and farm sites in the US Critical Zone Network. Molecular fingerprinting using electrospray ionization - Fourier transform - ion cyclotron resonance - mass spectrometry revealed that farm-influenced DOM was enriched in nitrogen-, …

Understanding The Drivers Of Marine Sediment Diagenesis In Carbonate-Bearing Sediments, Alex Reis

Theses and Dissertations--Earth and Environmental Sciences

Marine sediments serve as an important geochemical record used to study how the Earth’s climate and oceans have changed throughout geologic time. As such, it is critical to understand how these sediments can be altered following deposition on the seafloor. This dissertation targeted two key geochemical archives, carbonate and pyrite, to link changing burial conditions with the resulting marine sediment chemistry. In particular, primary carbonate minerals record several indicators of past ocean chemistry, while pyrite preserves information related to the redox state of the sediment during deposition and burial. Additionally, secondary processes associated with changes in pore fluid chemistry and …

Use Of Stable Isotope Geochemistry To Determine The Paleoenvironment Of The Pond Creek Coal Bed, Pike County, Eastern Kentucky, Vivian A. Edwards

Theses and Dissertations--Earth and Environmental Sciences

Wetlands are both critical habitats and bellwethers of the health of the environment. Coal, being the remains of wetlands, offers the possibility of understanding the evolution of wetlands over large climatic shifts. The paleoenvironment of coals can be determined from palynology, petrology, and geochemistry. Stable isotope ratios within coal, including carbon (δ¹³C), nitrogen (δ¹⁵N), and sulfur (δ³⁴S), are established tools for paleoenvironmental reconstructions. These ratios can be correlated to flora, geochemistry, macerals, and bacterial activity. However, carbon, nitrogen, and sulfur have given conflicting results in some studies and their correlation to known variables is …

Supplementary Material For Experimental Constraints On Rock And Mineral Alteration By Magmatic Gas: Implications For Mars (Safari Et Al., In Review), Natalie Zimmermann

Geosciences Research Data

This file contains supplemental data for the JGR manuscript Experimental Constraints on Rock and Mineral Alteration by Magmatic Gas: Implications for Mars (Safari et al., in review). It includes SEM images and associated EDS spectra of altered targets and phase coatings produced in gas-rock alteration experiments.

Impacts Of Management Practices And Soil Properties On Free-Living Nitrogen Fixation In Eastern South Dakota, Laura Galvan Nuevo

Electronic Theses and Dissertations

Free-living nitrogen (N) fixation (FLNF) may represent a sustainable pathway to supplement crop N demand in agroecosystems, yet edaphic and management factors regulating this process under field conditions remain poorly understood in the Northern Great Plains. Using 15N2 direct method to quantify potential FLNF (pFLNF) and baseline FLNF (bFLNF), this thesis investigates how crop rotations (2-, 3-, and 4-year systems), tillage management (conventional vs. no-till), cover cropping, and soil properties affect the potential of free-living diazotrophs to supply N via FLNF in a long-term no-till corn-based system in Southeastern South Dakota. A two-year field study evaluated pFLNF across four growing …

Report On A Gpr Survey Of The Copper Harbor Cemetery, Copper Harbor, Michigan, Grace Griffin

Dissertations, Master's Theses and Master's Reports

The Copper Harbor Cemetery in Grant Township, Michigan, is one of the oldest settler cemeteries in the Keweenaw, with the earliest burial dating back to 1853. The cemetery is also still used by the community today. However, consistent burial records have not been maintained throughout the cemetery's entire history, leading to some doubt about which areas of the cemetery can be opened for new burials and where excavation should be avoided. For this reason, Grant Township commissioned a ground penetrating radar (GPR) survey of the cemetery, primarily to locate anomalies indicating possible unmarked graves and possible buried headstones. The survey …

Slip Kinematics And Structural Analysis Of The Keweenaw Fault System From Lake Linden To Hancock, Michigan, Katherine M. Langfield

Dissertations, Master's Theses and Master's Reports

The Keweenaw fault is a crustal-scale fault spatially associated with Mesoproterozoic rocks of the Midcontinent Rift System. Along the fault, older Portage Lake Volcanics have been thrust southeastward over younger Jacobsville sandstone. Ideas on the fault’s origin, from oldest to most recent, include that it is: (1) a reverse fault, (2) a normal fault formed during midcontinent rifting that was reactivated and inverted to a reverse fault during the Grenville orogeny, and (3) a detached thrust fault system initiated during the Grenville orogeny.

This thesis is based on a U.S. Geological Survey EdMap grant to remap a portion of the …

Overview And Methods Of Molecular Paleontology: A Review, Shelby Touchstone

Williams Honors College, Honors Research Projects

Molecular paleontology—the study of ancient biomolecules preserved in fossils and sediments, including ancient DNA, lipids, and proteins—has motivated researchers since the 1950s, inspiring both scientific inquiry and broader cultural imagination. Think Jurassic Park. This honors thesis presents a comprehensive review of the history, current state, and methods of the field of molecular paleontology. Drawing on peer-reviewed literature and scholarly resources accessed through databases such as EBSCO and Bierce library, this review examines key techniques such as Next Generation Sequencing and amino acid racemization and will go over limitations and controversies in the field. It will also explore potential new …

Preliminary Analysis Of The Spatial Distribution Of Microplastics Along The Cuyahoga River, Northeast, Ohio, Ella Pitz

Williams Honors College, Honors Research Projects

Plastics are nearly ubiquitous throughout modern society, and when left in the natural environment, they degrade into microplastics. Microplastics are particles that range in diameter from 5 millimeters down to nanometers, and microplastics pose many potential environmental and health risks due to their small size and ease of ingestion. While the study of microplastics in the environment has become more common over the past ten years, microplastic concentrations remain unexplored in many regions throughout the country. Here I present a method for separating microplastics from organic matter and clastic sediment as well as preliminary measurements of microplastic concentrations in sediment …

A Simple Statistical Tool To Correct The Daily Temperature Effect On Dielectric Soil Matric Potential Sensor Readings, Sebastián Bravo Peña, Meindert Commelin, Ole O. Wendroth

Plant and Soil Sciences Faculty Publications

High-resolution time series recorded by soil water dielectric sensors are often affected by other processes. Dielectric soil matric potential sensors, such as the TEROS 21, exhibit temperature sensitivity, resulting in deviations of readings from the true value due to soil temperature fluctuations. However, methods for correcting this effect remain limited. The objective of this study was to create a straightforward, scale-based statistical approach to mitigate the influence of daily temperature oscillations on matric potential dielectric readings. The temperature sensitivity correction function (TSCF) identifies, quantifies, and smooths diurnal fluctuations caused by soil temperature dynamics. We provide a detailed description of the …

Drivers Of Phytoplankton Bloom Interannual Variability In The Amundsen And Pine Island Polynyas, Guillaume Liniger, Delphine Lannuzel, Sébastien Moreau, Michael S. Dinniman, Peter G. Stutton

CCPO Publications

The Amundsen Sea Embayment (ASE) experiences both the highest ice shelf melt rates and the highest biological productivity in West Antarctica. Using 19 years of satellite data and modelling output, we investigate the long-term influence of environmental factors on the phytoplankton bloom in the Amundsen Sea (ASP) and Pine Island (PIP) polynyas. We test the prevailing hypothesis that changes in ice shelf melt rate could drive interannual variability in the polynyas' surface chlorophyll-a (chl a) and Net Primary Productivity (NPP). We find that the interannual variability and long-term change in glacial meltwater may play an important role in …

An Analysis Of Volcanic Lightning And Its Controlling Factors, Nathan Stamford

Honors Theses

Volcanic lightning, first documented during the 79 AD eruption of Mount Vesuvius, includes any electrical discharge that is generated during a volcanic eruption rather than a thunderstorm. By analyzing individual eruptions and performing laboratory experiments, previous research has identified multiple controlling factors that influence the charging mechanisms and generation of volcanic lightning. While the previous research has made significant discoveries about the phenomenon, the exact relationship between many of these controlling factors and volcanic lightning generation has been poorly quantified. In this study, we investigate these controlling factors and show that they have a wide range of influence over volcanic …

The Shoreline Protection Potential Of Oyster Reefs: A Systematic Review And Meta-Analysis, Jessica R. Fergel, Robert E. Isdell, Gabriella Dipetto, Karinna Nunnez, Sean T. Gregory, Evan Hill, Donna Marie Bilkovic

Biological Sciences Faculty Publications

Nature-based solutions for erosion control that incorporate oyster reefs, alone or in combination with other habitats, are an increasingly popular approach due to their potential to protect shorelines and enhance oyster production. However, the extent to which natural or constructed oyster reefs provide shoreline protection remains unclear. We conducted a global systematic literature review and meta-analysis to summarize and evaluate the potential of oyster reefs in attenuating waves, promoting sediment accretion, and/or reducing shoreline erosion. Factors extracted from studies included shoreline protective measures examined, oyster reef structure type, and oyster reef tidal location. The results of the meta-analysis showed generally …

Hydrogeochemical And Redox Controls On Nitrate And Arsenic Co-Occurrence In The Western Kansas High Plains Aquifer (Usa): A Composite Health Risk Assessment And The Case For Risk-Informed Private Well Governance, Jonathan Kuffour Owusu

Master's Theses or Doctor of Nursing Practice

Fifty-one private domestic wells across western Kansas were sampled to quantify nitrate and arsenic occurrence, identify geochemical controls, and evaluate carcinogenic and non-carcinogenic health risks for adult and child receptors in a region where groundwater serves as the primary drinking water source with no routine regulatory oversight. Samples were analyzed for major ions, nutrients, and trace elements by ICP-MS, ion chromatography, and UV-Vis spectrophotometry. Shapiro-Wilk testing confirmed non-normal distributions for both contaminants; inter-county comparisons were therefore conducted using Kruskal-Wallis tests with Dunn's post-hoc correction. Health risk was quantified via chronic daily intake (CDI), hazard quotient (HQ), HQ-based Water Quality Index …

Using Remote Sensing Technology To Develop A Framework For Improving Hydrologic Models, Marissa Cook

Theses, Dissertations and Capstones

With increased storm intensity due to climate change and urbanization, flash flooding has become an increasingly significant issue globally and regionally. Although the factors influencing urban flash flooding are well-known, there is a growing need for technology to accurately and remotely predict the chance of a flash flood occurring from any given rain event to give people time to prepare. This study aims to use multispectral satellite imagery to provide a framework for improving near real-time flood predictions in an urban area of a high gradient, fourth order stream impacted by flooding. Specifically, we utilize satellite imagery to create the …

Paleo-Environmental Change In Deer Lagoon, Whidbey Island Interpreted From Diatoms And Lithology, Lourdes Garcia

All Master's Theses

Puget Sound is a densely populated, tectonically active area that can be affected by earthquakes from local crustal faults and the Cascadia subduction zone capable of producing abrupt coseismic subsidence. Tidal wetlands are particularly sensitive to abrupt changes because they are depositional environments that reside at sea-level and their lithology and ecological communities are strongly controlled by elevation within the tidal frame. As a result, coseismic subsidence can disrupt established environmental gradients and leave distinguishable signatures preserved within the stratigraphy, like tidal mud directly over peat deposits. These preserved records provide an opportunity to reconstruct past earthquakes and associated relative …

The Geomorphology And Hydrogeology Of Pre-Restoration West Fork Teanaway River, Wa, Usa, Shana M. Egan

All Master's Theses

The West Fork Teanaway (WFT) River in Kittitas County, WA is an entrenched bedrock river channel with disturbed floodplain geomorphology and degraded riparian ecology. Two stream restoration approaches, “stage 0” valley bottom reset and engineered logjam installation, will be installed at the WFT in summer 2026 by collaborators at the Washington State Department of Fish and Wildlife and Mid-Columbia Fisheries Enhancement Group. The objective of this study was to constrain the pre-restoration geomorphic and hydrologic conditions of the WFT. The WFT has an unconsolidated floodplain aquifer of predominantly coarse-grained fluvial deposits. Monitoring of groundwater and surface water levels began in …

Pre-Eruptive Timescales Via Olivine Diffusion Chronometry For Lava And Tephra Of The Schreibers Meadow Cinder Cone Eruption, Mount Baker (Kulshan), Wa, Sabrina Ansari

All Master's Theses

Mount Baker is a very-high threat Cascade volcano and is located near densely populated areas in northern Washington, putting many at risk if an eruption were to occur. Schreibers Meadow cinder cone is located on the southern flank of Mount Baker and produced the Sulphur Creek (SC) tephra and lava 9.8 ka. Previous work on the SC eruption used petrology and geochemistry to reconstruct the pre-eruptive magmatic architecture beneath Mount Baker Volcanic Field, including olivine-hosted melt inclusions to determine crystallization pressures, as well as plagioclase- and clinopyroxene-derived diffusion timescales to determine magma storage timescales of several months and recharge-to-eruption timescales …

Sedimentology, Paleontology, And Depositional Environments Of The Upper Devonian Lock Haven Formation In West Burlington Quarry, North-Central Pa, Michael Harman

Honors Theses

The Upper Devonian Lock Haven Formation in north-central Pennsylvania preserves evidence of significant climactic and evolutionary transitions, including the fin-to-limb transition and initial arborescence. The formation contains abundant sedimentary features, palynomorphs, trace fossils, and fish body fossils, making it crucial for reconstructing these paleoenvironments. However, integrated studies on the Lock Haven Formation are rare. This study characterizes the depositional environments, ichnology, paleontology, and age of the Lock Haven Formation. A recent exposure at the Insinger-Ward West Burlington Quarry reveals three middle to early late Famennian lithofacies associations (FAs). FA1 consists of red sandstone, shale, and mudstone containing rhizoliths (deeply penetrating …

Paleoflood Chronology For The West Branch Of The Susquehanna River Using Abandoned Chute Channel Sediments, Pennsylvania, Usa, Juliette A. Vanluven

Honors Theses

Anthropogenic climate change is altering the hydrologic cycle, increasing flood frequency and severity, with associated increased risks in population exposure. This is associated with increasing risks to the population of the Susquehanna River Valley, which supports over 600,000 people today. However, our understanding of the frequencies of large floods is limited by relatively short instrumental records. By studying sediments from an abandoned chute channel in the Robert Allen Natural Area near Williamsport, PA, we can extend the existing flood records using paleoflood slackwater sediments along the West Branch of the Susquehanna River.  Sylvan Dell is an abandoned chute channel that …

Sedimentological Characterization Of Main And Chute Channel Scroll Bars Along The Kantishna River, Alaska, Cooper Sentz

Honors Theses

Scroll bars, arcuate sediment ridges found along the inner banks of river bends, are common floodplain features in meandering river systems that form during lateral channel migration. Two hypothesized formation mechanisms described in prior studies are the aggradation of suspended load onto abandoned inner bank levee (IBL) deposits during overbank flow and the migration of transverse bar packages from the channel bed up onto the point bar during flooding events. To study the sedimentology and geometry of these features, we conduct remote sensing and field analysis on a 60 km portion of the Kantishna River, AK: a highly sinuous, pro-glacial …