Databases and Information Systems Commons^™

A Study Of Correlations Between The Definition And Application Of The Gene Ontology, Yuji Mo

Department of Computer Electronics and Engineering: Dissertations, Theses, and Student Research

When using the Gene Ontology (GO), nucleotide and amino acid sequences are annotated by terms in a structured and controlled vocabulary organized into relational graphs. The usage of the vocabulary (GO terms) in the annotation of these sequences may diverge from the relations defined in the ontology. We measure the consistency of the use of GO terms by comparing GO's defined structure to the terms' application. To do this, we first use synthetic data with different characteristics to understand how these characteristics influence the correlation values determined by various similarity measures. Using these results as a baseline, we found that …

A Hybrid Agent Architecture Integrating Desire, Intention And Reinforcement Learning, Ah-Hwee Tan, Yew-Soon Ong, Akejariyawong Tapanuj

Research Collection School Of Computing and Information Systems

This paper presents a hybrid agent architecture that integrates the behaviours of BDI agents, specifically desire and intention, with a neural network based reinforcement learner known as Temporal DifferenceFusion Architecture for Learning and COgNition (TD-FALCON). With the explicit maintenance of goals, the agent performs reinforcement learning with the awareness of its objectives instead of relying on external reinforcement signals. More importantly, the intention module equips the hybrid architecture with deliberative planning capabilities, enabling the agent to purposefully maintain an agenda of actions to perform and reducing the need of constantly sensing the environment. Through reinforcement learning, plans can also be …

Propeller: A Scalable Metadata Organization For A Versatile Searchable File System, Lei Xu, Hong Jiang, Xue Liu, Lei Tian, Yu Hua, Jian Hu

School of Computing: Technical Reports

The exponentially increasing amount of data in file systems has made it increasingly important for users, administrators and applications to be able to fast retrieve files using file-search services, instead of replying on the standard file system API to traverse the hierarchical namespaces.  The quality of the file-search services  is significantly affected by the file-indexing overhead, the file-search performance and the accuracy of search results.  Unfortunately, the existing file-search solutions either are so poorly scalable that their performance degrades unacceptably when the systems scale up, or incur so much crawling delays that they produce acceptably inaccurate results.  We believe that …

Pgtp: Power Aware Game Transport Protocol For Multi-Player Mobile Games, Bhojan Anand, Jeena Sebastian, Soh Yu Ming, Akhihebbal L. Ananda, Mun Choon Chan, Rajesh Krishna Balan

Research Collection School Of Computing and Information Systems

Applications on the smartphones are able to capitalize on the increasingly advanced hardware to provide a user experience reasonably impressive. However, the advancement of these applications are hindered battery lifetime of the smartphones. The battery technologies have a relatively low growth rate. Applications like mobile multiplayer games are especially power hungry as they maximize the use of the network, display and CPU resources. The PGTP, presented in this paper is aware of both the transport requirement of these multiplayer mobile games and the limitation posed by battery resource. PGTP dynamically controls the transport based on the criticality of game state …

Ua3/9/2 I.T. Division Annual Report + Tactical Plan, Wku Information Technology

WKU Administration Documents

Annual report of WKU Information Technology Division submitted to WKU President Gary Ransdell. Report is housed in UA3/9/2 Subject Files.

Relativistic Red-Black Trees, Philip William Howard, Jonathan Walpole

Computer Science Faculty Publications and Presentations

Operating system performance and scalability on sharedmemory many-core systems depends critically on efficient access to shared data structures. Scalability has proven difficult to achieve for many data structures. In this paper we present a novel and highly scalable concurrent red-black tree. Red-black trees are widely used in operating systems, but typically exhibit poor scalability. Our red-black tree has linear read scalability, uncontended read performance that is at least 25% faster than other known approaches, and deterministic lookup times for a given tree size, making it suitable for realtime applications.

Semi-Automatic Management Of Knowledge Bases Using Formal Ontologies, Andreas Textor

Theses

This thesis presents an approach that deals with the ever-growing amount of data in knowledge bases, especially concerning knowledge interoperability and formal representation of domain knowledge. There arc multiple issues that must be addressed with current systems. A multitude of different formats, sources and tools exist in a domain, and it is desirable to develop their use further towards a standardised environment. Such an environment should support both the representation and processing of data from this domain, and the connection to other domains, where necessary. In order to manage large amounts of data, it should be possible to perform whatever …

Development Of Visualization Facility At The Gis And Remote Sensing Core Lab, University Of Nevada, Las Vegas, Haroon Stephen, William J. Smith, Zhongwei Liu

Public Policy and Leadership Faculty Presentations

Visualization using advanced computational and graphic equipment has become a standard way of present day research. Availability of low cost and fast processing units, high resolution displays with graphic processing units, and specialized software has brought complex visualization capabilities to an office desktop. Nevertheless, when dealing with large datasets such as, global climate, geospatial, and social data the office desktop falls short and calls for a centralized visualization facility with high end computing and graphics equipment.

Visualization Facility at GIS and Remote Sensing Core Lab would be a useful and important addition to the UNLV IT infrastructure. It would provide …

Special Issue On Information Dissemination And New Services In P2p Systems, Min Song, Sachin Shetty, Wenbin Jiang, E. K. Park

Electrical & Computer Engineering Faculty Publications

Information dissemination is an important P2P application that has received considerable research attention in recent years. P2P information dissemination systems range from simple file sharing applications to more complex systems that allows users to securely and efficiently publish, organize, index, search, update and retrieve data in a distributed storage medium. For complex P2P information dissemination systems, there is a need for features which include security, anonymity, fairness, scalability, resource management, and organization capabilities. For effective information dissemination, following features of P2P systems and infrastructure need to be updated: distributed object location and routing mechanisms, novel approaches to content replication, caching …

Effects Of National Culture On Types Of Knowledge Sharing In Virtual Communities, Keng Siau, J. Erickson, Fiona Fui-Hoon Nah

Research Collection School Of Computing and Information Systems

Organizations are using virtual communities to facilitate knowledge management and to enhance communication among employees, customers, and other interested individuals. Individual users can use virtual communities to engage in knowledge sharing. Professional communicators need to understand and adapt to a globalized and “flat” world, where people across different cultures interact freely and easily with one another in virtual communities. An intriguing question regarding virtual communities relates to whether national culture affects communication and types of knowledge sharing. This study examines the influence of US and Chinese national cultures on types of knowledge-sharing activities in virtual communities. The findings indicate that …

Co-Creation And Collaboration In A Virtual World: A 3d Visualization Design Project In Second Life, Keng Siau, Fiona Fui-Hoon Nah, B. Mennecke, S. Schiller

Research Collection School Of Computing and Information Systems

One of the most successful and useful implementations of 3D virtual worlds is in the area of education and training. This paper discusses the use of virtual worlds in education and describes an innovative 3D visualization design project using one of the most popular virtual worlds, Second Life. This ongoing project is a partnership between IBM and three universities in the United States: the University of Nebraska-Lincoln, Iowa State University, and Wright State University. More than 400 MBA students have participated in this project by completing a creative design project that involves co-creation and collaboration in Second Life. The MBA …

Investigating Perceptions Of A Location-Based Annotation System, Huynh Nhu Hop Quach, Khasfariyati Razikin, Dion Hoe-Lian Goh, Thi Nhu Quynh Kim, Tan Phat Pham, Yin-Leng Theng, Ee-Peng Lim

Research Collection School Of Computing and Information Systems

We introduce MobiTOP, a Web-based system for organizing and retrieving hierarchical location-based annotations. Each annotation contains multimedia content (such as text, images, video) associated with a location, and users are able to annotate existing annotations to an arbitrary depth, in effect creating a hierarchy. An evaluation was conducted on a group of potential users to ascertain their perceptions of the usability of the application. The results were generally positive and the majority of the participants saw MobiTOP as a useful platform to share location-based information. We conclude with implications of our work and opportunities for future research.

Rapport: Semantic-Sensitive Namespace Management In Large-Scale File Systems, Yu Hua, Hong Jiang, Yifeng Zhu, Dan Feng

School of Computing: Technical Reports

Explosive growth in volume and complexity of data exacerbates the key challenge to effectively and efficiently manage data in a way that fundamentally improves the ease and efficacy of their use. Existing large-scale file systems rely on hierarchically structured namespace that leads to severe performance bottlenecks and renders it impossible to support real-time queries on multi-dimensional attributes. This paper proposes a novel semantic-sensitive scheme, called Rapport, to provide dynamic and adaptive namespace management and support complex queries. The basic idea is to build files’ namespace by utilizing their semantic correlation and exploiting dynamic evolution of attributes to support namespace management. …

Continuous Spatial Assignment Of Moving Users, Hou U Leong, Kyriakos Mouratidis, Nikos Mamoulis

Research Collection School Of Computing and Information Systems

Consider a set of servers and a set of users, where each server has a coverage region (i.e., an area of service) and a capacity (i.e., a maximum number of users it can serve). Our task is to assign every user to one server subject to the coverage and capacity constraints. To offer the highest quality of service, we wish to minimize the average distance between users and their assigned server. This is an instance of a well-studied problem in operations research, termed optimal assignment. Even though there exist several solutions for the static case (where user locations are fixed), …

Managing Media Rich Geo-Spatial Annotations For A Map-Based Mobile Application Using Clustering, Khasfariyati Razikin, Dion Hoe-Lian Goh, Ee Peng Lim, Aixin Sun, Yin-Leng Theng, Thi Nhu Quynh Kim, Kalyani Chatterjea, Chew-Hung Chang

Research Collection School Of Computing and Information Systems

With the prevalence of mobile devices that are equipped with wireless Internet capabilities and Global Positioning System (GPS) functionality, the creation and access of user-generated content are extended to users on the go. Such content are tied to real world objects, in the form of geospatial annotations, and it is only natural that these annotations are visualized using a map-based approach. However, viewing maps that are filled with annotations could hinder the serendipitous discovery of data, especially on the small screens of mobile devices. This calls for a need to manage the annotations. In this paper, we introduce a mobile …

Pagesense: Style-Wise Web Page Advertising, Lusong Li, Tao Mei, Xiang Niu, Chong-Wah Ngo

Research Collection School Of Computing and Information Systems

This paper presents an innovative style-wise advertising platform for web page. Web page “style” mainly refers to visual effects, such as color and layout. Unlike the most popular ad-network such as Google AdSense which needs publishers to change the original structure of their pages and define the position and style of the embedded ads manually, stylewise page advertising aims to automatically deliver styleconsistent ads at proper positions within the web page, without breaking the layout of the original page. Our system is motivated from the fact that almost 90% web pages contain blank regions without any content. Given a web …

A Self-Organizing Neural Architecture Integrating Desire, Intention And Reinforcement Learning, Ah-Hwee Tan, Yu-Hong Feng, Yew-Soon Ong

Research Collection School Of Computing and Information Systems

This paper presents a self-organizing neural architecture that integrates the features of belief, desire, and intention (BDI) systems with reinforcement learning. Based on fusion Adaptive Resonance Theory (fusion ART), the proposed architecture provides a unified treatment for both intentional and reactive cognitive functionalities. Operating with a sense-act-learn paradigm, the low level reactive module is a fusion ART network that learns action and value policies across the sensory, motor, and feedback channels. During performance, the actions executed by the reactive module are tracked by a high level intention module (also a fusion ART network) that learns to associate sequences of actions …

Survey Of Environmental Data Portals: Features, Characteristics, And Reliability Issues, Shahram Latifi, David Walker

2010 Annual Nevada NSF EPSCoR Climate Change Conference

24 PowerPoint slides Session 2: Infrastructure Convener: Sergiu Dascalu, UNR Abstract: -What is a Data Portal? -Presents information from diverse sources in a unified way -Enables instant, reliable and secure exchange of information over the Web -The "portal" concept is to offer a single web page that aggregates content from several systems or servers.

On The Applications Of Deterministic Chaos For Encrypting Data On The Cloud, Jonathan Blackledge, Nikolai Ptitsyn

Conference papers

Cloud computing is expected to grow considerably in the future because it has so many advantages with regard to sale and cost, change management, next generation architectures, choice and agility. However, one of the principal concerns for users of the Cloud is lack of control and above all, data security. This paper considers an approach to encrypting information before it is ‘place’ on the Cloud where each user has access to their own encryption algorithm, an algorithm that is based on a set of Iterative Function Systems that outputs a chaotic number stream, designed to produce a cryptographically secure cipher. …

Authentication Of Biometric Features Using Texture Coding For Id Cards, Jonathan Blackledge, Eugene Coyle

Conference papers

The use of image based information exchange has grown rapidly over the years in terms of both e-to-e image storage and transmission and in terms of maintaining paper documents in electronic form. Further, with the dramatic improvements in the quality of COTS (Commercial-Off-The-Shelf) printing and scanning devices, the ability to counterfeit electronic and printed documents has become a widespread problem. Consequently, there has been an increasing demand to develop digital watermarking techniques which can be applied to both electronic and printed images (and documents) that can be authenticated, prevent unauthorized copying of their content and, in the case of printed …

Crctol: A Semantic Based Domain Ontology Learning System, Xing Jiang, Ah-Hwee Tan

Research Collection School Of Computing and Information Systems

Domain ontologies play an important role in supporting knowledge‐based applications in the Semantic Web. To facilitate the building of ontologies, text mining techniques have been used to perform ontology learning from texts. However, traditional systems employ shallow natural language processing techniques and focus only on concept and taxonomic relation extraction. In this paper we present a system, known as Concept‐Relation‐Concept Tuple‐based Ontology Learning (CRCTOL), for mining ontologies automatically from domain‐specific documents. Specifically, CRCTOL adopts a full text parsing technique and employs a combination of statistical and lexico‐syntactic methods, including a statistical algorithm that extracts key concepts from a document collection, …

A Robust Damage Assessment Model For Corrupted Database Systems, Ge Fu, Hong Zhu, Yingjiu Li

Research Collection School Of Computing and Information Systems

An intrusion tolerant database uses damage assessment techniques to detect damage propagation scales in a corrupted database system. Traditional damage assessment approaches in a intrusion tolerant database system can only locate damages which are caused by reading corrupted data. In fact, there are many other damage spreading patterns that have not been considered in traditional damage assessment model. In this paper, we systematically analyze inter-transaction dependency relationships that have been neglected in the previous research and propose four different dependency relationships between transactions which may cause damage propagation. We extend existing damage assessment model based on the four novel dependency …

Coherent Phrase Model For Efficient Image Near-Duplicate Retrieval, Yiqun Hu, Xiangang Cheng, Liang-Tien Chia, Xing Xie, Deepu Rajan, Ah-Hwee Tan

Research Collection School Of Computing and Information Systems

This paper presents an efficient and effective solution for retrieving image near-duplicate (IND) from image database. We introduce the coherent phrase model which incorporates the coherency of local regions to reduce the quantization error of the bag-of-words (BoW) model. In this model, local regions are characterized by visual phrase of multiple descriptors instead of visual word of single descriptor. We propose two types of visual phrase to encode the coherency in feature and spatial domain, respectively. The proposed model reduces the number of false matches by using this coherency and generates sparse representations of images. Compared to other method, the …

Semantics-Preserving Bag-Of-Words Models For Efficient Image Annotation, Lei Wu, Steven C. H. Hoi, Nenghai Yu

Research Collection School Of Computing and Information Systems

The Bag-of-Words (BoW) model is a promising image representation for annotation. One critical limitation of existing BoW models is the semantic loss during the codebook generation process, in which BoW simply clusters visual words in Euclidian space. However, distance between two visual words in Euclidean space does not necessarily reflect the semantic distance between the two concepts, due to the semantic gap between low-level features and high-level semantics. In this paper, we propose a novel scheme for learning a codebook such that semantically related features will be mapped to the same visual word. In particular, we consider the distance between …

Scalable Detection Of Partial Near-Duplicate Videos By Visual-Temporal Consistency, Hung-Khoon Tan, Chong-Wah Ngo, Richang Hong, Tat-Seng Chua

Research Collection School Of Computing and Information Systems

Following the exponential growth of social media, there now exist huge repositories of videos online. Among the huge volumes of videos, there exist large numbers of near-duplicate videos. Most existing techniques either focus on the fast retrieval of full copies or near-duplicates, or consider localization in a heuristic manner. This paper considers the scalable detection and localization of partial near-duplicate videos by jointly considering visual similarity and temporal consistency. Temporal constraints are embedded into a network structure as directed edges. Through the structure, partial alignment is novelly converted into a network flow problem where highly efficient solutions exist. To precisely …

Distribution-Based Concept Selection For Concept-Based Video Retrieval, Juan Cao, Hongfang Jing, Chong-Wah Ngo, Yongdong Zhang

Research Collection School Of Computing and Information Systems

Query-to-concept mapping plays one of the keys to concept-based video retrieval. Conventional approaches try to find concepts that are likely to co-occur in the relevant shots from the lexical or statistical aspects. However, the high probability of co-occurrence alone cannot ensure its effectiveness to distinguish the relevant shots from the irrelevant ones. In this paper, we propose distribution-based concept selection (DBCS) for query-to-concept mapping by analyzing concept score distributions of within and between relevant and irrelevant sets. In view of the imbalance between relevant and irrelevant examples, two variants of DBCS are proposed respectively by considering the two-sided and onesided …

Mining Globally Distributed Frequent Subgraphs In A Single Labeled Graph, Xing Jiang, Hui Xiong, Chen Wang, Ah-Hwee Tan

Research Collection School Of Computing and Information Systems

Recent years have observed increasing efforts on graph mining and many algorithms have been developed for this purpose. However, most of the existing algorithms are designed for discovering frequent subgraphs in a set of labeled graphs only. Also, the few algorithms that find frequent subgraphs in a single labeled graph typically identify subgraphs appearing regionally in the input graph. In contrast, for real-world applications, it is commonly required that the identified frequent subgraphs in a single labeled graph should also be globally distributed. This paper thus fills this crucial void by proposing a new measure, termed G-Measure, to find globally …

Analyzing The Video Popularity Characteristics Of Large-Scale User Generated Content Systems, Meeyoung Cha, Haewoon Kwak, Pablo Rodriguez, Yong-Yeol Ahn, Sue Moon

Research Collection School Of Computing and Information Systems

User generated content (UGC), now with millions of video producers and consumers, is re-shaping the way people watch video and TV. In particular, UGC sites are creating new viewing patterns and social interactions, empowering users to be more creative, and generating new business opportunities. Compared to traditional video-on-demand (VoD) systems, UGC services allow users to request videos from a potentially unlimited selection in an asynchronous fashion. To better understand the impact of UGC services, we have analyzed the world's largest UGC VoD system, YouTube, and a popular similar system in Korea, Daum Videos. In this paper, we first empirically show …

Temporal Data Classification Using Linear Classifiers, Peter Revesz, Thomas Triplet

School of Computing: Conference and Workshop Papers

Data classification is usually based on measurements recorded at the same time. This paper considers temporal data classification where the input is a temporal database that describes measurements over a period of time in history while the predicted class is expected to occur in the future. We describe a new temporal classification method that improves the accuracy of standard classification methods. The benefits of the method are tested on weather forecasting using the meteorological database from the Texas Commission on Environmental Quality.

Self-Authentication Of Audio Signals By Chirp Coding, Jonathan Blackledge, Eugene Coyle

Conference papers

This paper discusses a new approach to ‘watermarking’ digital signals using linear frequency modulated or ‘chirp’ coding. The principles underlying this approach are based on the use of a matched filter to provide a reconstruction of a chirped code that is uniquely robust in the case of signals with very low signal-to-noise ratios. Chirp coding for authenticating data is generic in the sense that it can be used for a range of data types and applications (the authentication of speech and audio signals, for example). The theoretical and computational aspects of the matched filter and the properties of a chirp …