Chemistry Commons^™

Sir J. Fraser Stoddart To Speak At Andrews, Desmond Murray

Andrews Agenda: Campus News

No abstract provided.

The Effects Of Cannabidiol And Delta 9-Tetrahydrocannabinol Concentration On Breast Cancer Cells, Dorothy Agyemang

Ursidae: The Undergraduate Research Journal at the University of Northern Colorado

Delta 9-tetrahydrocannabinol (THC) and cannabidiol (CBD) are phytocannabinoids that have a potential impact on cancer treatments. Studies have shown that certain cannabinoids cause cancer cells to die, but only with the right concentration, which has not been well documented. The purpose of this study is to determine the exact concentration of CBD and THC needed to kill MCF-7 breast cancer cells. In this experiment, the initial treatment group will be treated with CBD or THC at concentrations of 0.1, 1, 10 and 100 micromolar. These concentrations were arbitrarily chosen because there is not an established baseline. Cell metabolic activity will …

The Iupac Gold Book Website, Stuart J. Chalk

Showcase of Faculty Scholarly & Creative Activity

In the past 100 years IUPAC has become well known for the development of nomenclature standards for chemicals and terminology for communication of chemically related concepts. Initially published in IUPAC's Pure and Applied Chemistry (PAC), terminology recommendations have been incorporated into the IUPAC Color Books published by the divisions. Subsequently, many terms from the color books have been incorporated into the Gold Book - the Compendium of Chemical Terminology. While the work to date as been focused on the standardization of concept (term) definitions for human use, the aggregated set of all PAC recommendations on terminology constitutes a corpus of …

G-Quadruplex Dynamics Contribute To Regulation Of Mitochondrial Gene Expression, M. Falabella, J. E. Kolesar, C. Wallace, D. De Jesus, L. Sun, Y. V. Taguichi, C. Wang, T. Wang, Irene M. Xiang , '18, J. K. Alder, R. Maheshan, W. Horne, Joshua R. Turek-Herman , '16, P. J. Pagano, C. M. St. Croix, N. Sondheimer, Liliya A. Yatsunyk, F. B. Johnson, B. A. Kaufman

Chemistry & Biochemistry Faculty Works

Single-stranded DNA or RNA sequences rich in guanine (G) can adopt non-canonical structures known as G-quadruplexes (G4). Mitochondrial DNA (mtDNA) sequences that are predicted to form G4 are enriched on the heavy-strand and have been associated with formation of deletion breakpoints. Increasing evidence supports the ability of mtDNA to form G4 in cancer cells; however, the functional roles of G4 structures in regulating mitochondrial nucleic acid homeostasis in non-cancerous cells remain unclear. Here, we demonstrate by live cell imaging that the G4-ligand RHPS4 localizes primarily to mitochondria at low doses. We find that low doses of RHPS4 do not induce …

Enantioselective Copper Catalyzed Alkyne-Azide Cycloaddition By Dynamic Kinetic Resolution, En Chih Liu, Joseph J. Topczewski

Chemistry Faculty Research & Creative Works

The copper(I) catalyzed alkyne-azide cycloaddition (CuAAC), a click reaction, is one of the most powerful catalytic reactions developed during the last two decades. Conducting CuAAC enantioselectively would add a third dimension to this reaction and would enable the direct synthesis of α-chiral triazoles. Doing so is demanding because the two precursors have linear geometries, and the triazole product is a flat heterocycle. Designing a chiral catalyst is further complicated by the complex mechanism of CuAAC. We report an enantioselective CuAAC (E-CuAAC), enabled by dynamic kinetic resolution (DKR). The E-CuAAC is high yielding and affords up to 99:1 er. The E-CuAAC …

Fluoride Removal From Water Using A 3d Printed Calcium Carbonate Filter, Sophia Bakar, David Kahler, Benjamin S. Goldschmidt

Undergraduate Research and Scholarship Symposium

Groundwater containing high concentrations of fluoride is the most common source of drinking water in rural areas in parts of east Africa, India, and China. The elevated levels of fluoride cause skeletal and dental fluorosis, which is the weakening and decay of bone structures due to the leeching of calcium from the body as calcium and fluoride bond by the process of adsorption. Over 150 million people are suffering from some form of fluorosis due to the consumption of groundwater. Calcium carbonate has been demonstrated to influence fluoride removal in several forms. To make fluoride removal a cost-effective and user-friendly …

Synthesis Of An Ideal Inhibitor For The Lpxc Enzyme, Taejun Lee

Honors Theses

Due to the growing need of antibiotics in modern day medicine, this study attempts to apply a method of medicinal chemistry that would create a novel inhibitor for a lesser known target of gram negative bacteria, the LpxC enzyme. This study proposes that a synthetic plan which consists of combining components of different molecules would create a more effective inhibitor. These components include a binding group for the active site of the enzyme, a hydrophobic chain which has been shown to interact with an allosteric site on the LpxC enzyme, and the isoxazoline ring which interacts with the zinc ion. …

3d Printed Nmr Spectra: From 1d And 2d Acquisition To 3d Visualization, Michael Bakker, Ben Boyd, Gary A. Meints

College of Natural and Applied Sciences

Visualization of two- dimensional and relaxation NMR spectra can be difficult for students new to the subject. Educators have utilized 3D printing previously to demonstrate concepts such as potential energy surfaces and molecular orbitals, but this technology has yet to be used to create a visual model of NMR data. In order to address this, we have developed an approach for creating 3D printed models of two- dimensional and inversion recovery spectra, which can then be used as an innovative teaching tool. This was done by converting raw FT NMR data into a 3D data graph using Mathematica. This graph …

Effects Of Electrical Stimulation On Glioma Cells In Vitro With Implications For Treating Chronic Pain: Development Of A Model System, David C. Platt

Theses and Dissertations

Glial cells comprise over 70% of the central nervous system cells and exhibit diverse functions including regulation of synaptic transmission, neuron protection/repair, maintenance of neuronal metabolism, and are implicated in the development of persistent neuropathic pain. In addition, a perturbation in the concentration of intracellular reactive oxygen species (ROS) and reactive nitrogen species (RNS) has likewise been associated with the development of a chronic pain state. This perturbation in ROS/RNS creates an environment of oxidative stress. However, the mechanism by which the pain signal transmission is modulated, and the roles ROS play in the perpetuation of the pain state are …

Kinetics Of Mashing In Beer Brewing Process, Ken Overway, Austin Reed

Chemistry Faculty Scholarship

The process called mashing, which steeps malted grain in water at specific temperatures in order to optimize enzymatic sugar production, is critical for the beer brewing process. Each kind of grain used to make beer could have unique optimal mashing temperatures since the α- and β-amylase enzymes that produce the sugars are a result of genetic differences. Beer has mainly been brewed with barley, wheat, rye, and less common grains such as corn and rice. Gluten free beer options are very limited, and this is problematic for those suffering from Celiac disease. Quinoa is the focus grain of this project …

Synthesis And Analysis Of 6-Acetyl-1,2,3,4-Tetrahydropyridine, A Major Contributor To ‘Mousy’ Off-Flavor In Sour And Wild Beers, Liesel Krout

Thinking Matters Symposium Archive

Unexpected tastes can negatively impact consumer experience in the beer industry. One such taste, a ‘mousy’ off-flavor, is diminishing the quality of sour and wild beers throughout the brewing community. The unpleasant flavor is a result of the combined presence of three organic compounds: 6-acetyl-1,2,3,4-tetrahydropyridine (ATHP), 2-acetyl-1-pyrroline, and 2-ethyl-3,4,5,6-tetrahydropyridine. Because of its unpredictable nature, brewers must wait for the compound to disappear before distribution, costing them valuable time and revenue. The factors responsible for formation, reasons for persistence, and degradation timelines of the compounds were unknown. A method for quantification was therefore necessary to determine those characteristics, and such quantification …

Development Of Ruthenium Drugs As Anticancer Agents, Daniel Boy

Chemistry & Biochemistry Student Projects

An overview of literature that outlines the research methods of the development of proposed Ruthenium based anti-cancer agents.

Senior Chemistry Thesis, Elisha North

Chemistry & Biochemistry Student Projects

No abstract provided.

Atomic Layer Deposition Applications In Nanotechnology, Alexandra Burke

Chemistry & Biochemistry Student Projects

No abstract provided.

Drug Improvement And Design Involving G-Protein Coupled Receptors, Gabriel Saliba

Chemistry & Biochemistry Student Projects

No abstract provided.

A Chemical Overview Of Opioid Receptors And Their Agonists, Noah Kuszak

Chemistry & Biochemistry Student Projects

This work is a brief overview of the three main opioid receptors and some current research of the ways we can change the agonists and how they affect the opioid receptor pathway.

Dentin Biomodification Potency Of Proanthocyanidins, David J. Ryker

Chemistry & Biochemistry Student Projects

No abstract provided.

Putting The I In Science, Naomi Kirkvold

Honors Program: Expanded Learning Clubs

This club gets kids interested in science in ways that they may not have experienced in a classroom by doing weekly experiments.

Synthesis And Characterization Of Degradable Polymers, Christopher Collins

Mahurin Honors College Capstone Experience/Thesis Projects

A degradable polymer with proposed applications in drug delivery was synthesized and characterized. This polymer was grown from a difunctional initiator, a "core" that is able to grow two polymer chains and able to degrade in the presence of oxidizing agents such as peroxides. During the first part of this project, poly(methyl methacrylate) was synthesized via atom transfer radical polymerization using commercially-available reagents in order to develop an optimal synthesis technique. This technique was then used to synthesize the degradable polymer. After introducing hydrogen peroxide, the molecular weight of the degradable polymer decreased in two different experiments, confirming its hypothesized …

Quantification Of Tylosin Antibiotics In Cattle Waste, Appala Keerthi

Masters Theses & Specialist Projects

Antibiotics are used as prophylactic agents to promote growth and for treating infections in animals. However, the irrational use of antibiotics in livestock management is a significant cause of the development of antibioticresistant genes in the environment. Each year 2 million people suffer from the infections caused by bacteria which are resistant to antibiotics and 23,000 of these people are estimated to die because of antibiotic resistance. New drugs are continually coming into the market but are at the risk of developing resistance. Thus, there is a need for the development of analytical methods which can be used to monitor …

Monitoring Transverse Relaxation Times Of Kerosene-Adulterated Diesel Using Low-Field Nuclear Magnetic Resonance Spectroscopy, Tristen Rumbaugh

Experiential Learning Projects

Time-domain nuclear magnetic resonance spectroscopy (TD-NMR) and low-field nuclear magnetic resonance spectroscopy (LF-NMR) are different techniques that vary in the range of magnetic field strengths that they use, which is a determining factor for the type of analysis that can be done. In this study, LF-NMR was used to perform a time-domain analysis of petroleum products, diesel and kerosene. This is a type of analysis which is typically performed using TD-NMR. Diesel and kerosene are two petroleum products that have different characteristics such as viscosity, boiling point, and hydrocarbon length. Diluting, or adulterating, diesel fuels with kerosene is a common …

Developing Tale Proteins As A Biosensor For Detecting Pathogen Specific Double-Stranded Dna, Kathrine Gaiko

Mahurin Honors College Capstone Experience/Thesis Projects

Transcription activator-like effector (TALE) proteins are important for DNA binding. They bind to specific nucleotide sequences by the use of two residues in each repeat allowing them to target specific DNA sequences. Their modular structure makes TALEs advantageous over other DNA binding proteins such as zinc finger proteins. Zinc finger proteins (ZFP) use a finger like projection to bind 3-4 subsequence base pairs while TALE proteins use two amino acid residues in each repeat to bind one nucleotide. ZFP can use SEER-Lac system for colorimetric detection, while TALE proteins can use fluorescence labeling with Alexa for detection of binding to …

An Evaluation Of Elemental Composition Of Soils Associated With Ground Nesting Ants In The Family Formicidae In Somerset County, Maine, Haley H. Depner

All Student Scholarship

Ants are keystone organisms and engineers in many ecosystems, playing an important role in nutrient cycling and rearrangement of organic and inorganic materials through foraging, waste management and, in subterranean species, nest construction and maintenance. In this study, I conducted elemental analysis of soils for calcium, copper, iron, potassium, manganese and zinc in and around the colonies of subterranean nesting ants. The two-step analysis used in this study utilizes the efficiency of X-Ray Fluorescence (XRF) Spectrometry to look for overall trends in elemental composition followed by Flame Atomic Absorbance (AA) to achieve higher resolution of select elements of interest as …

Growth, Lipid Production And Biodiesel Potential Of Chromulina Freiburgensis Dofl., An Acidophilic Chrysophyte Isolated From Berkeley Pit Lake, June E. Mohler Mitman

Graduate Theses & Non-Theses

Microalgae remain a promising, but underdeveloped source of lipids for sustainable biodiesel. Some of the obstacles to cost-effective commercial-scale production have been culture contamination and expensive harvest methods. A chrysophyte isolated from Berkeley Pit Lake and identified as Chromulina freiburgensis, was found to grow rapidly in a pH 2.5 liquid medium and to amass numerous intracellular lipid bodies. This research addresses the scarcity of published knowledge on the topic of chrysophyte species as potential lipid sources for biodiesel. It investigates how growth phase, culture conditions, and harvest timing influence the quantity and composition of lipids produced by this alga. …

Synthesis And Biological Applications Of Some Novel Urea And Thiourea-Benzimidazole Derivatives, Lamia Ali Siddig

Theses

The objective of this research is the synthesis and characterization of novel urea and thiourea-benzimidazole derivatives and to test their biological activities. The 17 novel compounds (57a-j), (58a-d), 62, 63, and 65 have been synthesized, purified by different techniques such as extraction and column chromatography, and then characterized by using suitable spectroscopic techniques including ^¹H-NMR, ¹³C-NMR, fluorescence, and IR spectroscopy techniques.

The biological activity of these compounds has been studied. The antibacterial activity was evaluated at different concentrations (μg/ ml) against 6 types of bacteria (Esherichia coli, Pseudomonas aeruginosa, Salmonella enterica, Klebsiella pneumoniae, Staphylococcus aureus …

Investigating The Kinetics Of Clay-Catalyzed Conversion Of Anthracene To Prebiotically Relevant 9,10-Anthroquinone, Hope Juntunen

Masters Theses & Doctoral Dissertations

The presence polycyclic aromatic hydrocarbons (PAHs) on the primordial Earth can be attributed to carbonaceous meteorites bombarding planetary surfaces. Subsequently, the PAHs reacted with catalytic clay mineral surfaces to produce quinones that functioned as electron transporters in emergent biological systems. To address this hypothesis, we assessed the kinetics of anthracene (ANTH) conversion to 9,10-anthraquinone (ANTHQ) in the presence of montmorillonite and kaolinite clay (MONT and KAO, respectively) over the temperature range 25 to 250 oC. Apparent rates of conversion were concentration independent and displayed a sigmoidal relationship with temperature, and conversion efficiencies ranged from 0.027 to 0.066%. Conversion was not …

A Dual Nanostructured Approach To Sers Amenable To Large-Scale Production, Kory Brian Castro

Chemistry & Biochemistry Theses & Dissertations

A SERS device was made using a dual-nanostructured surface comprised of silver nanoparticle and silver nanowires. The ability of each nanostructure to produce a uniform surface was characterized and the surface-enhanced Raman scattering (SERS) response of the resulting surfaces were examined using the reporter molecule 4-aminothiolphenol (ATP) and a 638 nm excitation laser.

A synthetic method was developed to produce silver nanowires with lengths of ~20 μm and diameters of ~100 nm with a narrow size distribution. The method utilized a simple, one-pot synthesis that is amenable to large-scale production. A selective precipitation method was used to the isolate the …

Development Of Acceptor-Integrated Crystalline Organic Materials, Brandon Yarbrough

Theses and Dissertations

We report the first example of fullerene-containing porous covalent-organic scaffold, which combines not only crystallinity and porosity, but also integrates the intrinsic properties of a redox-active buckyball, along with the ability to tune electronic properties. Thus, the presented studies not only demonstrate the possibility of merging the strong electron accepting properties of fullerene-based derivatives with the versatility of covalent-organic frameworks (COFs), but also begin the class of crystalline, entirely organic, donor-acceptor fullerene COFs through covalently modifying the channel walls. These studies could foreshadow new avenues for buckyball utilization for applications ranging from organic photovoltaics to molecular electronics.

1 H, 13 C, And 15 N Resonance Assignments Of The C-Terminal Lobe Of The Human Hect E3 Ubiquitin Ligase Itch, Steven A. Beasley, Roela Bardhi, Donald E. Spratt

Chemistry

ITCH (aka Atrophin-1-interacting protein 4) is a prominent member of the NEDD4 HECT (Homologous to E6AP C-Terminus) E3 ubiquitin ligase family that regulates numerous cellular functions including inflammatory responses through T-cell activation, cell differentiation, and apoptosis. Known intracellular targets of ITCH-dependent ubiquitylation include receptor proteins, signaling molecules, and transcription factors. The HECT C-terminal lobe of ITCH contains the conserved catalytic cysteine required for the covalent attachment of ubiquitin onto a substrate and polyubiquitin chain assembly. We report here the complete experimentally determined 1 H, 13 C, and 15 N backbone and sidechain resonance assignments for the HECT C-terminal lobe of …

Survey Of Chemistry I, Anne Parker, Farooq Khan, Victoria Geisler, Douglas Stuart

Chemistry Grants Collections

This collection of the grant proposal, syllabus, and final report for Survey of Chemistry I at University of West Georgia was created under a Round 12 Transformation Grant.