Physical Sciences and Mathematics Commons^™

Review Of The Evidence Used In The Description Of Currently Recognized Cetacean Subspecies, William F. Perrin, James G. Mead, Robert L. Brownell Jr.

United States Department of Commerce: Staff Publications

We reviewed the subspecies listed by Rice (1998) and those described since (a total of 49, in 19 species), assessing them against the criteria recommended by the recent Workshop on Shortcomings of Cetacean Taxonomy in Relation to Needs of Conservation and Management (Reeves et al., 2004). The workshop suggested that the subspecies concept can be construed to cover two types of entities: a) lineages diverging but not quite far along the continuum of divergence (still having significant gene flow with another lineage or lineages) to be judged as species, and b) lineages that may well be species but for which …

Asymptest: A Simple R Package For Classical Parametric Statistical Tests And Confidence Intervals In Large Samples, J.-F. Coeurjolly, R. Drouilhet, P. Lafaye De Micheaux, J.-F. Robineau

The R Journal

asympTest is an R package implementing large sample tests and confidence intervals. One and two sample mean and variance tests (differences and ratios) are considered. The test statistics are all expressed in the same form as the Student t-test, which facilitates their presentation in the classroom. This contribution also fills the gap of a robust (to non-normality) alternative to the chi-square single variance test for large samples, since no such procedure is implemented in standard statistical software.

Protein Secondary Structure Prediction Using Parallelized Rule Induction From Coverings, Leong Lee, Cyriac Kandoth, Jennifer Leopold, Ronald L. Frank

Computer Science Faculty Research & Creative Works

Protein 3D structure prediction has always been an important research area in bioinformatics. In particular, the prediction of secondary structure has been a well-studied research topic. Despite the recent breakthrough of combining multiple sequence alignment information and artificial intelligence algorithms to predict protein secondary structure, the Q3 accuracy of various computational prediction algorithms rarely has exceeded 75%. In a previous paper [1], this research team presented a rule-based method called RT-RICO (Relaxed Threshold Rule Induction from Coverings) to predict protein secondary structure. The average Q3 accuracy on the sample datasets using RT-RICO was 80.3%, an improvement over comparable computational methods. …

Press The Cancel Button! A Performance Evaluation Of Scalable In-Network Data Aggregation, Jamie Macbeth, Majid Sarrafzadeh

Computer Science: Faculty Publications

We perform real-world tests of the performance of medium access control protocol schemes for scalable data aggregation in sensor networks. Specifically, we evaluate the performance of a Listen-and-Suppress Carrier Sense Multiple Access (LAS-CSMA) scheme on the duplicate-insensitive exemplary monotonic aggregates MAX and MIN. These schemes reduce power consumption, network bandwidth usage and delays by suppressing node packet transmissions that are proven to be unnecessary in the query response. This is possible when nodes listen to the transmissions of other nodes as they respond.

Scalability tests were performed for 8 networks of various sizes, the largest having 24 Crossbow IRIS wireless …

Department Of Chemistry News For Alumni And Friends, December 2009, Illinois State University, Department Of Chemistry

Chem Letter

Newsletter of the Illinois State University Department of Chemistry

Kendall's Tau And Spearman's Rho For Zero-Inflated Data, Ronald Silva Pimentel

Dissertations

Zero-inflated continuous distributions have positive probability mass at zero in addition to a continuous distribution. Such type of data can be encountered, for example, in medical, environmental and financial research. The main focus of this research is to study the association of nonnegative random variables, both having a positive probability mass at zero. New estimators of the classical measures of association, Kendall's tau and Spearman's rho, appropriate for the zero-inflated distributions, are proposed and their asymptotic distributions are derived. Performance of the estimators is assessed by a Monte Carlo simulation study. New ideas are illustrated by a real data example.

A Two-Sample Adaptive Procedure Based On The Log-Rank And Peto And Peto's Wilcoxon Tests, Annie A. Tordilla

Dissertations

It has been shown that under a location-scale model y = μ + βz + σε at where y is right censored, the Log-Rank test is asymptotically efficient for the Extreme minimum value error distribution while Peto and Peto's Wilcoxon test is asymptotically efficient for the Logistic error distribution. We propose a two-sample adaptive test, which first selects between Extreme minimum value and Logistic error distribution as to which is a better fit to the data, then performs the asymptotically efficient test (Log-Rank or Peto and Peto's Wilcoxon test) for the selected distribution. The performance of the adaptive test is …

An Evaluation Of Potential Technologies For A Web Based Development Environment For Cs1 Students, Manuel Garcia

Computer Science and Software Engineering

The goal of this senior project was to design a web-based integrated development environment that would incorporate Web-CAT. Web-CAT is an automated testing tool designed by Stephen Edwards at Virginia Tech University, to help beginning students learn test-driven development. This tool runs on a server where a professor assigns usernames and passwords to students so they can submit code. This program can assist professors in grading, and students in showing errors in code. The development environment design waskept simple to create less confusion for beginning programming students. This development environment will be online to give all students universal access and …

Exercise Power Grid Display And Web Interface, Alexander (Alex) Chernetz

Computer Engineering

The 2008-2009 expansion of the Recreation Center at Cal Poly includes three new rooms with cardiovascular fitness equipment. As part of its ongoing commitment to sustainable development, the new machines connect to the main power grid and generate power during a workout. This document explains the process of quantifying and expressing the power generated using two interfaces: an autonomous display designed for a television with a text size and amount of detail adaptable to multiple television sizes and viewing distances, and an interactive, more detailed Web interface accessible with any Java-capable computer system or browser.

Regularity Of Non-Characteristic Minimal Graphs In The Heisenberg Group ℍ1, Luca Capogna, Giovanna Citti, Maria Manfredini

Mathematics Sciences: Faculty Publications

Minimal surfaces in the sub-Riemannian Heisenberg group can be constructed by means of a Riemannian approximation scheme, as limit of Riemannian minimal surfaces. We study the regularity of Lipschitz, non-characteristic minimal surfaces which arise as such limits. Our main results are apriori estimates on the solutions of the approximating Riemannian PDE and the ensuing C∞ regularity of the sub-Riemannian minimal surface along its Legendrian foliation.

Risk Matrix Input Data Biases, Eric D. Smith, William T. Siefert, David Drain

Engineering Management and Systems Engineering Faculty Research & Creative Works

Risk matrices used in industry characterize particular risks in terms of the likelihood of occurrence, and the consequence of the actualized risk. Human cognitive bias research led by Daniel Kahneman and Amos Tversky exposed systematic translations of objective probability and value as judged by human subjects. Applying these translations to the risk matrix allows the formation of statistical hypotheses of risk point placement biases. Industry-generated risk matrix data reveals evidence of biases in the judgment of likelihood and consequence-principally, likelihood centering, a systematic increase in consequence, and a diagonal bias. Statistical analyses are conducted with linear regression, normal distribution fitting, …

Towards Reasoning Pragmatics, Pascal Hitzler

Computer Science and Engineering Faculty Publications

The realization of Semantic Web reasoning is central to substantiating the Semantic Web vision. However, current mainstream research on this topic faces serious challenges, which force us to question established lines of research and to rethink the underlying approaches.

Spatial Distribution Of Petroleum Hydrocarbons In Sediment Cores From Blind Pass, St. Pete Beach, Florida, Charles M. Featherstone, John Proni, Thomas P. Carsey, Cheryl J. Brown, Madeleine M. Adler, Patricia Blackwelder, Husain Alsayegh, Teresa A. Hood, Christina Piela, Donald S. Mccorquodale Jr.

Marine & Environmental Sciences Faculty Reports

One hundred and one sediment cores were collected to characterize the spatial distribution of petroleum hydrocarbons within and just outside Blind Pass, St. Pete Beach, Florida. Twenty-five percent of the cores exhibited levels of petroleum hydrocarbons above detection limits of the gas chromatograph/flame ionization detector (GC/FID) (0.01 mg/Kg), but at generally low concentrations. Petroleum hydrocarbon speciation studies of these samples (gas chromatography/mass spectroscopy [GC/MS]) indicate above-detection level (1 μg/Kg) petroleum hydrocarbons are similar to the non-volatile petroleum hydrocarbons found in a Bouchard 155 reference sample collected after the 1993 oil spill in the area, but are in a much degraded …

Extraction And Analysis Of Coral Reef Core Samples From Broward County, Florida., Anastasios Stathakopoulos

HCNSO Student Theses and Dissertations

The reefs off Broward County exist as three shore-parallel, sequentially deeper terraces named the "inner", "middle", and "outer" reefs and also a shallower, nearshore ridge complex. These structures span the continental coast of southeast Florida from Palm Beach County to southern Miami-Dade County and were characterized as relict, early Holocene shelf-edge and mid-shelf reefs along with limestone ridges. Presently, the reefs are colonized by a fauna characteristic of West Atlantic/Caribbean reef systems. Scleractinian coral cover is low except for a few dense patches of Acropora cervicornis, while Acropora palmata is absent except for a few individual living colonies.

Coral …

Angular Mobility Assisted Coverage In Directional Sensor Networks, Cyriac Kandoth, Sriram Chellappan

Computer Science Faculty Research & Creative Works

In this paper, we consider the issue of angular mobility assisted coverage enhancement in directional camera sensor networks. in our model, each sensor can visually capture (i.e. sense) events within a sector in its field of view and can also rotate about a fixed axis to enhance its coverage. the problem we particularly address is how to enhance blanket coverage leveraging angular mobility of the sensors in the network starting from an arbitrary initial deployment. the core idea of our algorithm, called the Face Away algorithm, is to use the known directions of neighboring sensors to find the direction with …

Patterns Of Bison Hair Use In Nests Of Tallgrass Prairie Birds, Bryan R. Coppedge

The Prairie Naturalist

I examined patterns of bison (Bison bison L.) hair use by passerine birds nesting in the Tallgrass Prairie Preserve, Osage County, Oklahoma, 2002-2004. I collected and dissected 103 nests of 15 species into their constituent components. Nests were predominately composed of herbaceous material such as grass stems and leaves. Woody material and mud were rarely used. Bison hair was the most prominent zoological material used in nests, with lesser amounts and occurrence of arthropod silk, snake skin, feathers, jack rabbit (Lepus californicus Oray) fur, and man-made materials such as cellophane and string. At least one nest of 13 …

Bed Site Selection Of Fawn Pronghorn In Custer State Park, South Dakota, Chad P. Lehman, Jamin D. Hartland, Barbara J. Keller, Joshua J. Millspaugh, Gary C. Brundige

The Prairie Naturalist

We evaluated pronghorn (Antilocapra americana) fawn bedding site characteristics on a prairie and ponderosa pine (Pinus ponderosa) landscape interface in Custer State Park, South Dakota. We radio-marked 16 adult female pronghorn and collected bed site information from their fawns during 2007~2008. We compared bed site selection with random sites (n = 74) during 2 periods; the early hiding phase when fawns were 1 ~28 days of age (n = 23 bed sites) and the later group phase when fawns were 29~60 days of age (n = 52 bed sites). During the hiding phase fawns selected dry …

Noteworthy Winter Prey Of Short-Eared Owls In Southern Texas: A Case Study, Damon Williford, Marc C. Woodin, Mary Kay Skoruppa

The Prairie Naturalist

The winter range of North American short-eared owls (Asio flammeus) encompasses much of the United States, including southern Texas, where it is a common winter resident (Oberholser 1974, Rappole and Blacklock 1985). Winter food habits of short-eared owls are relatively weJl documented, but the majority of investigations have been conducted in eastern Canada and northeastern U.S. (Clark 1975, Holt 1993); midwestern U.S. (Colvin and Spaulding 1983); and British Columbia and Pacific northwestern U.S. (Bogiatto et al. 2001). The short-eared owl has a narrow trophic niche, generally preying on small mammals, with voles (Microtus spp.) and deer mice …

A Partial Inventory Of Islands In North Dakota: Potential For Breeding Waterfowl Management, Michael L. Szymanski

The Prairie Naturalist

Islands can provide secure nesting habitat for ducks and other waterbirds, especially in agriculturally dominated landscapes. I inventoried natural and man-made islands in the portion of North Dakota covered by the Prairie Pothole Joint Venture (PPJV). I mapped 1,305 islands in this area; up to 46% of which could provide enhanced nest success with management (e.g., predator removal or establishment of brushy cover). Management of islands for breeding ducks may be an important method for achieving desired reproductive rates in the PP JV as substantial areas of perennial grass cover are lost from federal conservation programs, primarily the Conservation Reserve …

Message From The Vice President For Research And Federal Relations, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.

Friends Of The Library Mcnair Scholarship Awards, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.

Graduate Scholar Profile, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.

Chemistry Division News, Luray M. Minikiewicz

Sci-Tech News

No abstract provided.

Sci-Tech Contributed Papers For The 2010 Sla Conference

Sci-Tech News

No abstract provided.

Aerospace Section News, Gale Harris

Sci-Tech News

No abstract provided.

Nist Tour Attendees At 2009 Annual Conference

Sci-Tech News

No abstract provided.

Stimuli-Responsive Hydrogel Microdomes Integrated With Genetically Engineered Proteins For High-Throughput Screening Of Pharmaceuticals, Sylvia Daunert, Sapna K. Deo, Jason Douglas Ehrick, Tyler William Browning, Leonidas G. Bachas

Chemistry Faculty Patents

A hydrogel microdome that can swell in response to a stimuli or target molecule is formed by polymerizing a mixture comprising a monomer capable of forming a hydrogel with a biopolymer. An array of hydrogel microdomes can be formed on a substrate by microspotting the mixture and polymerizing. The array can be used for high-throughput screening of analytes as well as for use as an actuator and biosensor using the swelling property of the hydrogel.

Mcnair Scholars Program, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.

Mentor Profile, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.

Full Issue, The Mcnair Team

McNair Scholars Research Journal

No abstract provided.