Physical Sciences and Mathematics Commons^™

An Empirical Study Of Alias Analysis Techniques, Andrew T. Tran

Master's Theses

As software projects become larger and more complex, software optimization at that scale is only feasible through automated means. One such component of software optimization is alias analysis, which attempts to determine which variables in a program refer to the same area in memory, and is used to relocate instructions to improve performance without interfering with program execution. Several alias analyses have been proposed over the past few decades, with varying degrees of precision and time and space complexity, but few studies have been conducted to compare these techniques with one another, nor to measure with program data to confirm …

Tessellated Voxelization For Global Illumination Using Voxel Cone Tracing, Sam Thomas Freed

Master's Theses

Modeling believable lighting is a crucial component of computer graphics applications, including games and modeling programs. Physically accurate lighting is complex and is not currently feasible to compute in real-time situations. Therefore, much research is focused on investigating efficient ways to approximate light behavior within these real-time constraints.

In this thesis, we implement a general purpose algorithm for real-time applications to approximate indirect lighting. Based on voxel cone tracing, we use a filtered representation of a scene to efficiently sample ambient light at each point in the scene. We present an approach to scene voxelization using hardware tessellation and compare …

Preparation Of Supramolecular Amphiphilic Cyclodextrin Bilayer Vesicles For Pharmaceutical Applications, Kate E. Frischkorn

Master's Theses

Recent pharmaceutical developments have investigated using supramolecular nanoparticles in order to increase the bioavailability and solubility of drugs delivered in various methods. Modification of the carbohydrate cyclodextrin increases the ability to encapsulate hydrophobic pharmaceutical molecules by forming a carrier with a hydrophobic core and hydrophilic exterior. Guest molecules are commonly added to these inclusion complexes in order to add stability and further increase targeting abilities of the carriers. One such guest molecule is adamantine combined with a poly(ethylene glycol) chain. Vesicles are formed by hydrating a thin film of amphiphilic cyclodextrin and guest molecules in buffer solution that mimics physiological …

Real-Time Object Removal In Augmented Reality, Tyler Dahl

Master's Theses

Diminished reality, as a sub-topic of augmented reality where digital information is overlaid on an environment, is the perceived removal of an object from an environment. Previous approaches to diminished reality used digital replacement techniques, inpainting, and multi-view homographies. However, few used a virtual representation of the real environment, limiting their domains to planar environments.

This thesis provides a framework to achieve real-time diminished reality on an augmented reality headset. Using state-of-the-art hardware, we combine a virtual representation of the real environment with inpainting to remove existing objects from complex environments.

Our work is found to be competitive with previous …

Hydrologic Response To Conifer Removal And Upslope Harvest In An Encroached Montane Meadow, Noël C. Fie

Master's Theses

Meadows are crucial components to larger river watersheds because of their unique hydrologic and ecological functions. Due to climate change, over grazing, and fire suppression, conifer encroachment into meadows has accelerated. In some western regions, nearly half of all meadow habitat has been loss due to conifer encroachment. Restoration of these hydrologic systems requires tree removal. Many studies exist that address the issue of conifer encroachment in montane meadows, however, few studies focus on the role that conifer removal plays on the encroaching meadow. Furthermore, few studies exist that document the hydrologic change from conifer removal and further restoration steps, …

Influencing Exploration In Actor-Critic Reinforcement Learning Algorithms, Andrew R. Gough

Master's Theses

Reinforcement Learning (RL) is a subset of machine learning primarily concerned with goal-directed learning and optimal decision making. RL agents learn based on a reward signal discovered from trial and error in complex, uncertain environments with the goal of maximizing positive reward signals. RL approaches need to scale up as they are applied to more complex environments with extremely large state spaces. Inefficient exploration methods cannot sufficiently explore complex environments in a reasonable amount of time, and optimal policies will be unrealized resulting in RL agents failing to solve an environment.

This thesis proposes a novel variant of the Actor-Advantage …

Calibration And Limitations Of The Mg Ii Line-Based Black Hole Masses, Jong-Hak Woo, Huynh Anh N. Le, Marios Karouzos, Dawoo Park, Daesong Park, Matthew A. Malkan, Tommaso Treu, Vardha Nicola Bennert

Physics

We present single-epoch black hole mass () calibrations based on the rest-frame ultraviolet (UV) and optical measurements of Mg ii 2798 Å and Hβ 4861 Å lines and the active galactic nucleus (AGN) continuum, using a sample of 52 moderate-luminosity AGNs at z ~ 0.4 and z ~ 0.6 with high-quality Keck spectra. We combine this sample with a large number of luminous AGNs from the Sloan Digital Sky Survey to increase the dynamic range for a better comparison of UV and optical velocity and luminosity measurements. With respect to the reference based on the line dispersion of H …

Improving Swarm Performance By Applying Machine Learning To A New Dynamic Survey, John Taylor Jackson

Master's Theses

A company, Unanimous AI, has created a software platform that allows individuals to come together as a group or a human swarm to make decisions. These human swarms amplify the decision-making capabilities of both the individuals and the group. One way Unanimous AI increases the swarm’s collective decision-making capabilities is by limiting the swarm to more informed individuals on the given topic. The previous way Unanimous AI selected users to enter the swarm was improved upon by a new methodology that is detailed in this study. This new methodology implements a new type of survey that collects data that is …

Characterizing Mental Health And Wellness In Students Across Engineering Disciplines, Andrew Danowitz, Kacey Beddoes

Computer Science and Software Engineering

Anecdotal evidence has long supported the idea that engineering students have lower levels of mental health and wellness than their peers. It is often posited that the large number of courses, low overall retention, difficult courses, and the abundance of intensive engineering projects lead to an unhealthy work-life balance and eventually lower levels of mental health for this population. To date, however, there has been no comprehensive study on the prevalence and types of mental health conditions that afflict engineering students, or any data on whether certain disciplines within engineering may see a greater prevalence of certain mental health conditions …

Rotordynamic Analysis Of Theoretical Models And Experimental Systems, Cameron R. Naugle

Master's Theses

This thesis is intended to provide fundamental information for the construction and

analysis of rotordynamic theoretical models, and their comparison the experimental

systems. Finite Element Method (FEM) is used to construct models using Timoshenko

beam elements with viscous and hysteretic internal damping. Eigenvalues

and eigenvectors of state space equations are used to perform stability analysis, produce

critical speed maps, and visualize mode shapes. Frequency domain analysis

of theoretical models is used to provide Bode diagrams and in experimental data

full spectrum cascade plots. Experimental and theoretical model analyses are used

to optimize the control algorithm for an Active Magnetic Bearing …

Detecting Speakers In Video Footage, Michael Williams

Master's Theses

Facial recognition is a powerful tool for identifying people visually. Yet, when the end goal is more specific than merely identifying the person in a picture problems can arise. Speaker identification is one such task which expects more predictive power out of a facial recognition system than can be provided on its own. Speaker identification is the task of identifying who is speaking in video not simply who is present in the video. This extra requirement introduces numerous false positives into the facial recognition system largely due to one main scenario. The person speaking is not on camera. This paper …

Influence Of Internal Bores On Larval Fish Abundance And Community Composition, Patrick J. Phelan, John Steinbeck, Ryan K. Walter

Physics

A persistent semidiurnal internal tidal bore feature occurs at the head of the Monterey Bay Submarine Canyon and drives regular intrusions of cold, subthermocline waters onto the adjacent shelf. In this study, we examine the influence of this internal tidal bore feature on the larval fish community using over a year of periodic larval fish samples collected coincidently with physical measurements. Larval samples were categorized into one of two water mass periods: a “warm period” representative of shallow coastal shelf waters and a “cold period” characteristics of colder waters present during internal bore forcing. Using multivariate statistical methods, we show …

Agriculture In The Classroom Farm Day Lesson Plan, Tessa Nicole Thompson

Agricultural Education and Communication

Nontraditional educational programs have been proclaimed desirable by many teachers, and proven effective through data collection and feedback (Coombs and Ahmed, 1974). Of the more popular unconventional educational programs, outside learning activities are commonly implemented as they are not only advantageous to students, but to teachers as well (Cengelci, 2013; Knoblock, 2008). Though nontraditional, much thought must be put into creating lesson plans for these educational programs.

El Dorado County’s Agriculture in the Classroom program utilizes nontraditional outdoor learning activities to conduct “Farm Day.” This lesson plan, created for Farm Day, is to teach third graders the importance of composting …

An Empirical Study Of Css Code Smells In Web Frameworks, Tobias Paul Bleisch

Master's Theses

Cascading Style Sheets (CSS) has become essential to front-end web development for the specification of style. But despite its simple syntax and the theoretical advantages attained through the separation of style from content and behavior, CSS authoring today is regarded as a complex task. As a result, developers are increasingly turning to CSS preprocessor languages and web frameworks to aid in development. However, previous studies show that even highly popular websites which are known to be developed with web frameworks contain CSS code smells such as duplicated rules and hard-coded values. Such code smells have the potential to cause adverse …

Rental Property Energy Efficiency In San Luis Obispo, Zachary Earl Shockley

Physics

In the modern era, many people choose to rent homes instead of purchasing a home. College towns have an even more disproportionate number of renters when compared to other cities. The majority of rental properties are much less energy efficient than their owner-occupied counterparts. This project analyzes the energy efficiency issues of rental properties in San Luis Obispo and examines potential ways to remedy these issues. In order to analyze these issues, the guiding principles of building science are first discussed, followed by case studies of rental properties in San Luis Obispo. These case studies examine multiple rental properties and …

Stability Of The Broad-Line Region Geometry And Dynamics In Arp 151 Over Seven Years, A. Pancoast, A. J. Barth, K. Horne, T. Treu, Vardha N. Bennert, H. Winkler

Physics

The Seyfert 1 galaxy Arp 151 was monitored as part of three reverberation mapping campaigns spanning 2008–2015. We present modeling of these velocity-resolved reverberation mapping data sets using a geometric and dynamical model for the broad-line region (BLR). By modeling each of the three data sets independently, we infer the evolution of the BLR structure in Arp 151 over a total of 7 yr and constrain the systematic uncertainties in nonvarying parameters such as the black hole mass. We find that the BLR geometry of a thick disk viewed close to face-on is stable over this time, although the size …

Semantic Document Clustering Using Information From Wordnet And Dbpedia, Lubomir Stanchev

Computer Science and Software Engineering

Semantic document clustering is a type of unsupervised learning in which documents are grouped together based on their meaning. Unlike traditional approaches that cluster documents based on common keywords, this technique can group documents that share no words in common as long as they are on the same subject. We compute the similarity between two documents as a function of the semantic similarity between the words and phrases in the documents. We model information from WordNet and DBPedia as a probabilistic graph that can be used to compute the similarity between two terms. We experimentally validate our algorithm on the …

Coastal Upwelling Seasonality And Variability Of Temperature And Chlorophyll In A Small Coastal Embayment, Ryan K. Walter, Kevin Armenta, Brandon Shearer, Ian C. Robbins, John Steinbeck

Physics

While the seasonality of wind-driven coastal upwelling in eastern boundary upwelling systems has long been established, many studies describe two distinct seasons (upwelling and non-upwelling), a generalized framework that does not capture details relevant to marine ecosystems. In this contribution, we present a more detailed description of the annual cycle and upwelling seasonality for an understudied location along the central California coast. Using both the mean monthly upwelling favorable wind stress and the monthly standard deviation, we define the following seasons (contiguous months) and a transitional period (non-contiguous months): “Winter Storms” season (Dec-Jan-Feb), “Upwelling Transition” period (Mar and Jun), …

A 12 Year Temperature And Wind Speed Climatology For The Marshall Field Site Near Boulder Colorado 2006-2018, John Nicholas Adrian, Scott Landolt

STAR Program Research Presentations

The Denver-Boulder region in Colorado is located on the border of two distinct weather regimes, the Rocky Mountains to the west and the Great Plains to the east. This region experiences inclement and sometimes unpredictable weather events, which can be accompanied by changes in temperatures and wind speed. To better understand the climate for the region, nearly 12 years of temperature and wind speed data from the Marshall Field Site were analyzed to assess changes in these parameters over time. Methods: Temperature recordings were primarily taken from a CS-500L probe, with data gaps filled in from a Lufft WS600 and …

X-Ray Spectroscopy Of Nio And Nanodiamond At Ssrl, Jackson Earl

STAR Program Research Presentations

The first aspect of this research project focuses on investigating the surface chemistry of high pressure high temperature (HPHT) nanodiamond by using X-ray spectroscopy techniques at the Stanford Synchrotron Radiation Lightsource (SSRL). HPHT nanodiamond is being examined as a biosensing tool for electric field detection based on the fluorescent nitrogen vacancy center hosted within diamond. With use of the transition edge spectrometer (TES), a state-of-the-art X-ray fluorescence detector, we are able to probe the surface and bulk properties of diamond. Preliminary work using density functional theory (DFT) has been done, offering insight into ground state energies and electronic structure. DFT …

On-Ice Arctic Sea Ice Thickness Measurements By Auger, Core, And Electromagnetic Induction, Ryan E. Avila, Benjamin Holt

STAR Program Research Presentations

Ice thickness measurements have been taken in the arctic through a variety of means for a long time in order to better understand the long-term changes to sea ice. This project is focused on measurements made directly on the ice by using an auger or electromagnetic sounding which have both been shown to be highly accurate compared to other observational methods. Our first goal is to create and update an archive of sea ice data that collects smaller separated data sets in one easy to access location for other researchers to use. Our second goal is to use this data …

Resistance Temperature Detectors In A Cryostat Refrigeration System, Kirsten Marie Manahan, Alice Callen

STAR Program Research Presentations

The Large Synoptic Survey Telescope (LSST) is a ground-based telescope that will survey the Southern sky every few nights. Located in the telescope will be a 3.2 gigapixel digital camera. To ensure proper instrumentation of the camera, there must be a monitored stable temperature. As part of my research, I assembled resistance temperature detectors and tested them to verify their reliability in measuring temperature in the camera’s cryostat refrigeration cooling system. Resistance temperature detectors function by the principle of thermal resistivity, in which their electrical resistances vary as temperature varies. Through testing, I was able to determine whether these particular …

Probing The Surface Of Nanodiamonds At Stanford Synchrotron Radiation Lightsource And San Jose State University, Jocelyn Valenzuela, Jackson Earl, Cynthia Melendrez, Grace Jeanpierre, Dennis Nordlund, Abraham Wolcott

STAR Program Research Presentations

The nitrogen-vacancy center in diamond is a promising tool in oncology, electric field sensing, and quantum cryptography. High-pressure high-temperature (HPHT) nanodiamonds (NDs) are prime contenders for these fields because they host nitrogen-vacancy centers (NVCs) which are applicable towards cancer detection and electric and magnetic field sensing. However, to apply HPHT NDs to these fields, the surface must first be functionalized—a difficult process because of the inert nature of the surface. The project at hand focuses on surface modification of HPHT NDs with amines to allow for further bioconjugation of small molecules and plasmonic shells. This is done via liquid-phase chemistry …

Lightning Draft, Benjamin Sweedler

Computer Science and Software Engineering

Lightning Draft is a web application for drafting Magic: the Gathering cards. Users can visit www.lightningdraft.online to build a deck from randomly generated booster packs. This app was inspired by digital card games such as Hearthstone. Lightning Draft is a quick, fun, and simple alternative to drafting with physical cards.

Noteit Ios App, Waylin W. Wang, Gurjeevan Bains

Computer Science and Software Engineering

Miscommunication is a common struggle that many students face in today’s world, despite the significant technological progress that we have made. With NoteIt, we aimed to solve this issue, by allowing students to join groups based off of the courses that they are enrolled in during the current quarter. Within the app, they can send and receive messages and events from everyone else in the group, or post private reminders to themselves. Communication can range from assignment clarification to exam preparation tips. Overall the development of the application went relatively well, despite some roadblocks along the way. We were satisfied …

Probing The Black-Hole-Mass-Galaxy Connection Of Active Galaxies Using 2d Galaxy Fitting Techniques On Near-Infrared Images, Isak Dan Stomberg

Physics

Active Galactic Nuclei (AGNs) provide a unique opportunity to measure the mass of supermassive black holes located in the centers of their host galaxies. This enables studying the scaling relations between the mass of the black hole and the properties of the host galaxy.

In this thesis, we present an investigation of the relationship between black hole masses and the host galaxy bulge and total luminosity for a pilot sample of 15 objects imaged in the near-infrared with the 8m telescope of Gemini North observatory. We perform a 2D decomposition of the host galaxies using the software Galfit and obtain …

Rogue Rotary - Modular Robotic Rotary Joint Design, Sean Wesley Murphy, Tyler David Riessen, Jacob Mark Triplett

Mechanical Engineering

This paper describes the design process from ideation to test validation for a singular robotic joint to be configured into a myriad of system level of robots.

Optimal Layout For A Component Grid, Michael W. Ebert

Computer Science and Software Engineering

Several puzzle games include a specific type of optimization problem: given components that produce and consume different resources and a grid of squares, find the optimal way to place the components to maximize output. I developed a method to evaluate potential solutions quickly and automated the solving of the problem using a genetic algorithm.

A Study Of Marine Terrace Formation Along The California Central Coast, Mary C. Devlin

Natural Resources Management and Environmental Sciences

Marine terrace formation is in many instances attributed to wave action, and shore platforms are often called “wave-cut”. However, alternative models for marine terrace formation suggest that other types of physical and chemical weathering have a more central role in the formation of marine terraces than is widely acknowledged. Roering and Retallack (2012) concluded that the roles of subaerial physical and chemical weathering are significant, and played a major role in the formation of the terraces. In this study, weathering of beach cliffs and shore platforms associated with marine terraces at eight sites in two different locations along the central …

A High Quality, Eulerian 3d Fluid Solver In C++, Lejon Anthony Mcgowan

Computer Science and Software Engineering

Fluids are a part of everyday life, yet are one of the hardest elements to properly render in computer graphics. Water is the most obvious entity when thinking of what a fluid simulation can achieve (and it is indeed the focus of this project), but many other aspects of nature, like fog, clouds, and particle effects. Real-time graphics like video games employ many heuristics to approximate these effects, but large-scale renderers aim to simulate these effects as closely as possible.

In this project, I wish to achieve effects of the latter nature. Using the Eulerian technique of discrete grids, I …