Agronomy and Crop Sciences Commons^™

Gopher Intrusion In Cropping Systems, Kenneth Romero, Paul Cardinalli

Agricultural Education and Communication

The purpose of this project was to determine if no till vs. till on gopher populations was more beneficial. Which is more efficient at controlling gophers and explain the damage they can cause and the diseases they can potentially vector. What are the different options of pest managements that have to be used when dealing with a gopher infestation in a tilled field vs. a no-tilled field.

The Effects Of Foliar Nutrient Applications On Split, Yield, And Internal Fruit Quality Of 'Wonderful' Pomegranate (Punica Granatum L.), John Matthew Chater

Master's Theses

Fruit split is the most important physiological disorder in pomegranate production, causing devastating crop losses worldwide. Foliar nutrient applications have been used experimentally to mitigate pomegranate fruit split but none have been conducted using the industry standard cultivar, Wonderful, and little is known about the effects of foliar nutrient applications on pomegranate. Additionally, investigations into putative health benefits of pomegranate fruit have increased interest in its production but limited evidence exists regarding effects of agricultural practices such as foliar fertilizer applications on internal fruit quality. ‘Wonderful’ pomegranate trees at 2 commercial orchards were treated with foliar applications of ZnSO_{4 …}

Soybean Planting And Risk-Return Tradeoffs In The Mid-Southern United States, Weston Weeks

Graduate Theses and Dissertations

This thesis is comprised of two studies on the effects of soybean (Glycine max (L.) Merr.) planting date (PD) and maturity group (MG) selection on producer expected returns. Having to replant soybean after early-season planting because of poor stand establishment is costly for producers. Replanting costs have increased in the last ten years as seed and other input costs for soybean have increased. Using five years of field trial results from two locations in Arkansas, the yield response to early and late season plant population density has been estimated to determine yield and future revenue potential for the purpose of …

Distribution Of Herbicide-Resistant Shattercane And Johnsongrass Populations In Sorghum Production Areas Of Nebraska And Northern Kansas, Rodrigo Werle, Amit J. Jhala, Melinda K. Yerka, J. Anita Dille, John L. Lindquist

Department of Agronomy and Horticulture: Faculty Publications

Overreliance on acetolactate synthase (ALS)-inhibiting herbicides for weed control during the 1990s resulted in selection of ALS-resistant shattercane [Sorghum bicolor (L.) Moench ssp. drummondii (Nees ex Steud.) de Wet ex Davidse] biotypes in Nebraska. The objective of this study was to assess the baseline presence of ALS-resistance in 190 shattercane and 59 johnsongrass [Sorghum halepense (L.) Pers.] populations collected across northern Kansas, northwestern Missouri, and southern Nebraska in 2013. In 2014, a preliminary field experiment was conducted to evaluate the presence of herbicide resistance in the aforementioned populations. Treatments consisted of four herbicides (clethodim {2-[1-[[(E)-3-chloroprop-2-enoxy]amino] propylidene]-5-(2-ethylsulfanylpropyl)cyclohexane-1,3-dione}, glyphosate [N-(phosphonomethyl) …

Canola: A Modern Crop For A Modern Era, Kenneth J. Roché

Doctor of Plant Health Program: Dissertations and Student Research

The University of Nebraska-Lincoln Doctor of Plant Health program is a professional doctorate program with a comprehensive approach to plants and agriculture. The program emphasizes a broad interdisciplinary education across all plant-related disciplines, practical learning, research, and experience through internships. For my final required internship, I worked as a senior agricultural research intern with Research Designed for Agriculture (RD4AG) in Montana. RD4AG is a contract research organization based in Yuma, AZ with over thirty-years of experience. During my three month internship at RD4AG in Montana, a large portion of my responsibilities centered on managing regulated canola trials that were undertaken …

Genetic Control Of Morphometric Diversity In The Maize Shoot Apical Meristem, Samuel Leiboff, Xianran Li, Heng-Cheng Hu, Natalie Todt, Jinliang Yang, Xiao Li, Xiaoqing Yu, Gary J. Muehlbauer, Marja C.P. Timmermans, Jianming Yu, Patrick S. Schnable, Michael J. Scanlon

Department of Agronomy and Horticulture: Faculty Publications

The maize shoot apical meristem (SAM) comprises a small pool of stem cells that generate all above-ground organs. Although mutational studies have identified genetic networks regulating SAM function, little is known about SAM morphological variation in natural populations. Here we report the use of high-throughput image processing to capture rich SAM size variation within a diverse maize inbred panel. We demonstrate correlations between seedling SAM size and agronomically important adult traits such as flowering time, stem size and leaf node number. Combining SAM phenotypes with 1.2 million single nucleotide polymorphisms (SNPs) via genome-wide association study reveals unexpected SAM morphology candidate …

Residue Harvest Effects On Irrigated, No-Till Corn Yield And Nitrogen Response, Charles S. Wortmann, Charles A. Shapiro, Marty R. Schmer

Department of Agronomy and Horticulture: Faculty Publications

Crop residue harvest occurs on about 40% of Nebraska’s 3,700,000 ha of corn (Zea mays L.) land, primarily for feeding of beef cattle. Immobilization of applied N is expected to be less with residue harvest due to reduced microbial activity for digestion of high C/N ratio organic material. Residue reduction may affect subsequent crop yield and response to applied N. Field research was conducted at three locations over 2 yr in eastern Nebraska for irrigated, no-till corn following corn to determine residue harvest effects on yield and the economically optimal nitrogen rate (EONR). Study sites had deep silt loam …

Evidence Of Field-Evolved Resistance To Bifenthrin In Western Corn Rootworm (Diabrotica Virgifera Virgifera Leconte) Populations In Western Nebraska And Kansas, Adriano E. Pereira, Haichuan Wang, Sarah N. Zukoff, Lance Meinke, B. Wade French, Blair Siegfried

Department of Entomology: Faculty Publications

Pyrethroid insecticides have been used to control larvae or adults of the western corn rootworm (WCR), Diabrotica virgifera virgifera LeConte, a key pest of field corn in the United States. In response to reports of reduced efficacy of pyrethroids in WCR management programs in southwestern areas of Nebraska and Kansas the present research was designed to establish a baseline of susceptibility to the pyrethroid insecticide, bifenthrin, using susceptible laboratory populations and to compare this baseline with susceptibility of field populations. Concentration-response bioassays were performed to estimate the baseline susceptibility. From the baseline data, a diagnostic concentration (LC99) was determined and …

Herbicides Applied At Or Shortly After Seeding Are Effective For Weed Control In Seedling Buffalograss, Luqi Li, Matthew D. Sousek, Zachary Reicher

Department of Agronomy and Horticulture: Faculty Publications

Herbicides applied shortly after seeding of buffalograss [Buchloe dactyloides (Nutt.) Engelm.] can help reduce weed pressure and maximize establishment of buffalograss. This study evaluated 12 relatively recently developed herbicides for turf safety and weed control when applied at seeding or 0 or 2 weeks after emergence (WAE) of ‘Bowie’ or ‘Sundancer’ buffalograss. Primary weed species on the site were common purslane (Portulaca oleracea L.), redroot pigweed (Amaranthus retroflexus L.), and/or yellow foxtail [Setaria lutescens (Weigel ex Stuntz) F.T. Hubb.]. Regardless of cultivar, untreated checks had53% weed cover by 6 WAE, whereas most of the herbicide treatments resulted …

Synfind: Compiling Syntenic Regions Across Any Set Of Genomes On Demand, Haibao Tang, Matthew D. Bomhoff, Evan Briones, Liangsheng Zhang, James C. Schnable, Eric Lyons

Department of Agronomy and Horticulture: Faculty Publications

The identification of conserved syntenic regions enables discovery of predicted locations for orthologous and homeologous genes, evenwhennosuchgeneispresent.Thiscapabilitymeansthatsynteny-basedmethodsarefarmoreeffectivethansequencesimilaritybased methods in identifying true-negatives, a necessity forstudying gene loss and gene transposition. However, the identification of syntenicregionsrequirescomplexanalyseswhichmustberepeatedforpairwisecomparisonsbetweenanytwospecies.Therefore,as the number of published genomes increases, there is a growing demand for scalable, simple-to-use applications to perform comparative genomic analyses that cater to both gene family studies and genome-scale studies. We implemented SynFind, a web-based tool that addresses this need. Given one query genome, SynFind is capable of identifying conserved syntenic regions in any set of targetgenomes.SynFindiscapableofreportingper-geneinformation,usefulforresearchersstudyingspecificgenefamilies,aswellas genome-wide data sets of syntenic gene and predicted gene …

A Population Structure And Genome-Wide Association Analysis On The Usda Soybean Germplasm Collection, Nonoy Bandillo, Diego Jarquin, Qijian Song, Randall L. Nelson, Perry Cregan, James Specht, Aaron Lorenz

Department of Agronomy and Horticulture: Faculty Publications

Population structure analyses and genome-wide association studies (GWAS) conducted on crop germplasm collections provide valuable information on the frequency and distribution of alleles governing economically important traits. The value of these analyses is substantially enhanced when the accession numbers can be increased from ~1,000 to ~10,000 or more. In this research, we conducted the first comprehensive analysis of population structure on the collection of 14,000 soybean accessions [Glycine max (L.) Merr. and G. soja Siebold & Zucc.] using a 50KSNP chip. Accessions originating from Japan were relatively homogenous and distinct from the Korean accessions. As a whole, both Japanese and …

Community Seed Banks: Origins, Evolution, And Prospects, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

As a survey of contemporary community-level seed banks, this is an excellent compilation and instructive guide. The first section provides an overview of how seed banks originated, their varied goals and activities, several contrasting forms of management, and how they organize and perform to meet these goals. An intriguing claim in the book is that the concept of “seed banks is only some three decades old,” while in fact the practice of saving, preserving, and exchanging seed within a community is probably as old as human communities themselves.

Organized seed banks often serve specific functions: preserving seeds, providing seed access …

Adding Genetically Distant Individuals To Training Populations Reduces Genomic Prediction Accuracy In Barley, Aaron Lorenz, Kevin P. Smith

Department of Agronomy and Horticulture: Faculty Publications

One of the most important factors affecting genomic prediction accuracy appears to be training population (TP) composition. The objective of this study was to evaluate the effect of genomic relationship on genomic prediction accuracy and determine if adding increasingly unrelated individuals to a TP can reduce prediction accuracy. To accomplish this, a population of barley (Hordeum vulgare L.) lines from the University of Minnesota (lines denoted as MN) and North Dakota State University (lines denoted as ND) breeding programs were used for model training. Predictions were validated using two independent sets of progenies derived from MN  MN crosses …

Switchgrass Germplasm Resources, Michael D. Casler, Kenneth P. Vogel, Melanie Harrison

Department of Agronomy and Horticulture: Faculty Publications

Switchgrass (Panicum virgatum L.) is an important native grass and dominant member of the tallgrass prairie ecosystem. It is used for conservation, restoration, livestock feed production, and bioenergy feedstock production. The purpose of this review is to describe the biological and geographical basis for switchgrass germplasm diversity and to provide a resource for scientists and outreach personnel to find switchgrass germplasm to meet their needs. Upland and lowland ecotypes represent the most important polymorphism in switchgrass, with distinct but overlapping geographic distributions. Variation in ploidy exists within both ecotypes, with 2n = 4x = 36 the dominant ploidy …

Management Options For Water-Repellent Soils In Australian Dryland Agriculture, M. M. Roper, S. L. Davies, P. S. Blackwell, D. J. M. Hall, D. Bakker, R. Jongepier, P. R. Ward

Natural Resources Research Articles

Water-repellent (‘non-wetting’) soils are a major constraint to agricultural production in southern and south-west Australia, affecting >10 Mha of arable sandy soils. The major symptom is dry patches of surface soil, even after substantial rainfall, directly affecting agricultural production through uneven crop and pasture germination, and reduced nutrient availability. In addition, staggered weed germination impedes effective weed control, and delayed crop and pasture germination increases the risk of wind erosion. Water repellency is caused by waxy organic compounds derived from the breakdown of organic matter mostly of plant origin. It is more prevalent in soils with a sandy surface texture; …

Assessing Multiple-Herbicide Resistance In A 2,4-D Resistant Waterhemp (Amaranthus Tuberculatus) Biotype From Nebraska: Student Research, Roberto Crespo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

A waterhemp biotype was recently reported resistant to 2,4-D in Nebraska. In addition to the repeated use of 2,4-D, atrazine and imazathapyr were reported to be frequently used to control broadleaf weeds. Greenhouse experiments were conducted to confirm 2,4-D resistance and test for resistance to growth regulator herbicides and other herbicide modes-of-action (MoA). A single dose-response experiment showed reduced sensitivity in all three waterhemp biotypes to atrazine, imazethapyr and lactofen; therefore, they were generally considered resistant to those three herbicide MoA. None of the biotypes contained the Ser264 target-site mutation. Since the ametryn dose-response experiment resulted in all susceptible biotypes, …

Economic Contribution Of Agriculture And Food To Arkansas' Gross Domestic Product 1997-2013, Leah English, Jennie Popp, Wayne Miller

AAES Research Reports and Research Bulletins

Agricultural production, processing, and retail industries are major contributors to the Arkansas economy in terms of GDP. Agriculture contributes to the economy through direct agricultural production, value-added processing, and agricultural retail activities, and it also plays an important role through its interactions with other sectors. The use of non-agricultural goods and services as inputs into the agricultural sector promotes diversified growth in Arkansas’ economy; thus agriculture remains a vital part of Arkansas’ economy. This report: 1) compares the relative size of the Agriculture and Food Sector in Arkansas with those of neighboring states; 2) provides an overview of Arkansas’ economy …

Screening Of Olive Cultivars For Tolerance To Fusicladium Oleagineum In South Africa, Zakhele Cyril Msimango

Professional Agricultural Workers Journal

Abstract

This study evaluated commercial olive cultivars for resistance to olive leaf spot (OLS). A growth chamber trial was undertaken with one temperature treatment (16°C) applied during inoculation while a relative humidity (RH) of above 80% was maintained. Plants were kept for 48 hours at 99% RH after inoculation and then moved to shade netted area for disease development at a temperature of 25±5°C. The results were used for categorizing the eight olive cultivars evaluated in this study according to their OLS susceptibility. ‘Frantoio’ was categorized as most tolerant; ‘Nandi’ and ‘Leccino’ were found to be moderately tolerant, and ‘Nocellara …

Nitrogen And Water Effects On Canopy Sensor Measurements For Site-Specific Management Of Crops, Nicholas C. Ward

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Water and nitrogen (N) are undoubtedly the two largest agricultural inputs globally. Coupled with advances in site-specific management technology their integration into production agriculture will allow for the most efficient use these crop input resources. Active canopy sensors offer the ability to measure biophysical plant traits rapidly and make assessments about plant status. Specifically, optical sensor measurements of light reflectance assess plant N status allowing for in-season and on-the-go N recommendations and applications; while infrared thermometers (IRT) measurement of canopy temperature can be used a tool for irrigation management. To evaluate how these technologies work among different plant stress environments …

Land Use And Water And Soil Management Practices Impacts On Potential Groundwater Recharge In Loess Regions Of South Central Nebraska, Gustavo Bosch-Rubia

Department of Agricultural and Biological Systems Engineering: Dissertations, Theses, and Student Research

Sustainability of agro-ecosystems must consider land use and water and soil management effects on groundwater recharge. Water flow beneath the plant root zone through the intermediate vadose zone determines potential groundwater recharge. Different land uses, water and soil management practices control deep percolation as a result of changes on evapotranspiration and infiltration. This study of the impact of surface activities on deep percolation was conducted at six locations across Nebraska: Two center-pivot irrigated no-till planting systems fields were compared with one tilled center-pivot irrigated field, a furrow irrigated field with multiple tillage treatments, an eco-fallow dryland farming system, and a …

Occurrence Of An Herbicide-Resistant Plant Trait In Agricultural Field Margins, Karla L. Gag, David J. Gibson, Bryan G. Young, Julie M. Young, Joseph L. Matthews, Stephen C. Weller, Robert G. Wilson

Department of Agronomy and Horticulture: Faculty Publications

Agricultural environments allow study of evolutionary change in plants. An example of evolution within agroecological systems is the selection for resistance to the herbicide glyphosate within the weed, Conyza canadensis. Changes in survivorship and reproduction associated with the development of glyphosate resistance (GR) may impact fitness and influence the frequency of occurrence of the GR trait. We hypothesized that site characteristics and history would affect the occurrence of GR C. canadensis in field margins. We surveyed GR occurrence in field margins and asked whether there were correlations between GR occurrence and location, crop rotation, GR crop trait rotation, crop type, …

Introducing Green Manures In An Organic Soybean–Winter Wheat–Corn Rotation: Effects On Crop Yields, Soil Nitrate, And Weeds, Katja Koehler-Cole

School of Natural Resources: Dissertations, Theses, and Student Research

In organic soybean– winter wheat – corn rotations, animal manure is a common choice to maintain high yields, but leguminous crops grown as green manures after wheat harvest and incorporated into the soil before corn planting, can be an alternative when animal manure is not accessible. Forage legumes with high dry matter (DM) production and high biological N fixation have been shown to meet corn N demand. However, in Eastern Nebraska, lack of precipitation can reduce green manure growth and N fixation, leading to an insufficient N supply for corn, but corn growth can also be impacted by green manure …

Early Weaning Reduces Rangeland Herbage Disappearance, Patricia Johnson, Kenneth C. Olson, Roger N. Gates, Hubert H. Patterson, Mindy Hubert, Douglas Landbloom, Janna J. Kincheloe, Heather A. Richter, Allison V. Grove

Natural Resource Management Faculty Publications

Early weaning of beef calves reduces nutrient and forage demand in a cow–calf enterprise, potentially contributing to reduction in forage utilization on the pasture from which calves are removed by a nonlactating cow vs. a cow–calf pair. Research was conducted to evaluate weaning beef calves 90 days early (EW) vs. normal weaning (NW) on pasture herbage disappearance in mixed-grass prairie pastures in the northern Great Plains. Spring-calving cows (n = 48) were utilized in each study year (2003, 2004, and 2006) from the date of early weaning (August) until the date of normal weaning (November). Cow–calf pairs were randomly …

Comparing Yield Monitors With Weigh Wagons For On-Farm Corn Hybrid Evaluation, Bjorn P. Nelson, Roger Wesley Elmore, Andrew W. Lenssen

Department of Agronomy and Horticulture: Faculty Publications

For many years, on-farm yield evaluations of corn (Zea mays L.) hybrids were done with weigh wagons, handheld moisture testers, and measuring wheels. Today, most combines have continuous flow yield and moisture sensors. Published research results comparing the accuracy of combine-mounted sensor systems with that of weigh wagons are limited for on-farm corn hybrid evaluation. This study examined the accuracy of combine-mounted yield sensors with traditional weigh wagon methodology in on-farm corn hybrid strip trials. Data from combine-mounted sensors for plot weight, moisture percentage, and yield were compared with weigh wagon weight, handheld moisture testers, and calculated yield …

Genetic Engineering Online Lessons Improve Teaching And Increase Knowledge And Accepting Attitudes Among Students, Grace Troupe

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Genetic engineering has been used in the production of food in the U.S. for nearly three decades, however, science literacy in genetic engineering among consumers is still low. To address this problem, an online resource called The Journey of a Gene (passel.unl.edu/ge) was created to help incorporate genetic engineering education in high school and college curriculums. Here we report two studies conducted to evaluate the effectiveness of The Journey of a Gene in 1) improving student knowledge and attitudes about genetic engineering and 2) helping teachers increase their knowledge as well as quantity and quality of genetic engineering instruction. In …

The Biological Consequences Of Kaolin Geophagia, Deloris Alexander, Desire Richardson, Lakisha Odom, Kara Cromwell, Dejuana Grant, Micoya Myers, Eddy Cadet, Hamid Mahama, Vijaya Rangari, Ralphenia Pace, Ramble Ankumah, Kokoasse Kpomblekou-A, Curtis Fluker

Professional Agricultural Workers Journal

Abstract

Kaolin geophagia is associated with the relief of gastrointestinal distress, but it may also cause adverse health effects on the body. This study was designed to: assess kaolin composition; test if 129SvEv mice would consume kaolin and determine the consequences of consumption; and assess rotational stress modulation of consumption. Thirteen kaolin samples were purchased from Alabama and Georgia stores. Chemical and physical properties were characterized for each sample using a Munsell chart, pH meter, Energy Dispersive Spectroscopy, Transmission Electron Microscopy, Visible Near-InfraRed Spectra, and Inductively Coupled Plasma-Optical Emission Spectrometry. Kaolin was then given to mice as food supplements and …

Microsatellite Variations Of Elite Setaria Varieties Released During Last Six Decades In China, Guanqing Jia, Xiaotong Liu, James C. Schnable, Zhengang Niu, Chunfang Wang, Yuhui Li, Shujun Wang, Suying Wang, Jinrong Liu, Erhu Guo, Hui Zhi, Xianmin Diao

Department of Agronomy and Horticulture: Faculty Publications

Crop improvement is a multifaceted micro-evolutionary process, involving changes in breeding approaches, planting configurations and consumption preferences of human beings. Recent research has started to identify the specific genes or genomic regions correlate to improved agronomic traits, however, an apparent blank between the genetic structure of crop elite varieties and their improving histories in diverse modern breeding programs is still in existence. Foxtail millet (Setaria italica) was one of the earliest cereal crops to be domesticated and served as a staple crop for early civilizations in China, where it is still widely grown today. In the present trial, …

Physiological And Nutritional Characterization Of High Yield Soybean, Ryan John Van Roekel

Graduate Theses and Dissertations

Soybean [Glycine max (L.) Merr.] grain yields greater than three times the national average have been reported in yield contests. Characterization of soybean in a maximum yield environment is necessary to provide empirical data to support those yield claims and to provide an understanding of the physiological processes at that yield level. From 2011 to 2013, research characterized biomass and N accumulation rates, radiation use efficiency (RUE), leaf N dynamics, the rate of harvest index increase (dry matter allocation coefficient, DMAC), seedfill period (SFP), and grain yield components from Mr. Kip Cullers' contest fields and in small plots at the …

Impact Of Arbuscular Mycorrhizal Fungi On The Physiology Of Maize Genotypes Under Variable Nitrogen And Phosphorus Levels, Roberto Crespo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

It is important to increase our understanding of AM fungal and maize genotype interactions, the impact of N and P fertilization and water condition on the symbiosis, and on the physiology and nutritional status of maize plants. In two greenhouse experiments AM inoculated plants exhibited root colonization values around 70% which was confirmed by the presence of the AM lipid biomarker (C16:1cis11). Nitrogen fertilization increased AM root colonization, but only compared to unfertilized plants. Root colonization and biomarker concentration in root and soil were similar among inoculated maize genotypes across conventional and drought tolerant hybrids. Mycorrhizal inoculation had a positive …

Producing Quality Barley For The Malting Industry, Haley H. Oser Dph

Doctor of Plant Health Program: Dissertations and Student Research

The University of Nebraska – Lincoln Doctor of Plant Health program requires each student to fulfill a professional internship over the last summer of the program. For my internship, I worked as a Barley Scientist Intern for MillerCoors and Golden Malting in Golden, Colorado. During this internship I gained a fundamental understanding of malting barley production with a significant emphasis on grain quality. Barley produced for malting must fulfill strict industry quality standards before it is accepted by the head maltsters. These quality standards include: a high germination rate, low moisture content, protein content within an acceptable range and the …