Organismal Biological Physiology Commons^™

Parasites Of Civets (Mammalia, Viverridae) In Sabah, Borneo: A Coprological Survey, Christina P. Colon, Sharon Patton

Publications and Research

Parasite data were collected from unlogged and selectively logged lowland rain forests in Borneo. Scat from a female Viverra tangalunga (Malay civet) in the unlogged forest contained eggs of Capillaria spp., Trichuris sp., Mamomoganomus sp., and nematode larvae. Scat attributed to V. tangalunga contained reproductive products (eggs/oocysts/cysts/larvae) of Capillaria sp., Toxocara sp., Ancylostoma sp. (probably A. ceylanicum), Isospora spp., strongylate-type eggs (probably Ancylostoma spp.), Paragoni­ mus sp. and other Trematoda eggs, Monocystis sp. cysts, Gnathostoma sp. (probably G. spinigerum), the lungworm Viverrostrongylus brauni, pinworm-type eggs, Eimeria spp., Sarcocystis-type sporocyst, dermanysid mites and mesostigmatid mites. Parasites from gut samples from two …

Potential For Nitrogen Fixation And Nitrification In The Granite-Hosted Subsurface At Henderson Mine, Co, Elizabeth D. Swanner, Alexis S. Templeton

Elizabeth D. Swanner

The existence of life in the deep terrestrial subsurface is established, yet few studies have investigated the origin of nitrogen that supports deep life. Previously, 16S rRNA gene surveys cataloged a diverse microbial community in subsurface fluids draining from boreholes 3000 feet deep at Henderson Mine, CO, USA (Sahl et al., 2008). The prior characterization of the fluid chemistry and microbial community forms the basis for the further investigation here of the source of NH4+. The reported fluid chemistry included N2, NH4+ (5–112 μM), NO2− (27–48 μM), and NO3− (17–72 μM). In this study, the correlation between low NH4+ concentrations …

Systematics Of Protosteloid Amoebae, Lora Lindley Shadwick

Graduate Theses and Dissertations

Because of their simple fruiting bodies consisting of one to a few spores atop a finely tapering stalk, protosteloid amoebae, previously called protostelids, were thought of as primitive members of the Eumycetozoa sensu Olive 1975. The studies presented here have precipitated a change in the way protosteloid amoebae are perceived in two ways: (1) by expanding their known habitat range and (2) by forcing us to think of them as amoebae that occasionally form fruiting bodies rather than as primitive fungus-like organisms. Prior to this work protosteloid amoebae were thought of as terrestrial organisms. Collection of substrates from aquatic habitats …

Interspecies Comparison Of Αii-Spectrin Abundance Between Chinook Salmon And Steelhead, Brielle D. Kemis, Ann L. Miracle, Katie A. Wagner, Christa M. Woodley

STAR Program Research Presentations

Salmonids, such as Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss), are a staple economic, recreational, tribal, and environmental resource, yet many populations are unsustainable. This study was part of a broad scale effort to monitor the impact of downstream migration obstacles on juvenile salmonid health and survival, which is an essential step towards increasing Smolt-to-Adult Return ratios (SARs). The objective of this study was to determine if juvenile Chinook salmon and steelhead exhibit differing quantities of alphaII-Spectrin Breakdown Products (SBDPs) over two consecutive spring migration periods, indicative of neurogenesis rate and/or biological response to head …

Evidence Of A Rudimentary Colon In Leucoraja Erinacea, Alyssa M. Simeone

Honors Theses

During the transition of animals from water onto land, the colon is believed to have evolved as an essential water-absorbing organ in terrestrial vertebrates to prevent desiccation. The class Chondrichthyes, comprised of sharks, rays, and skates, are isotonic to their marine environment, and thus do not require a functional colon. The Chondrichthyes are an excellent organism for developmental and physiological studies in evolutionary context because they have undergone little evolutionary change since their appearance 450 million years ago. Previous histochemical studies demonstrate potential water absorbing properties in the digestive tract of the little skate, Leucoraja erinacea (Theodosiou et al., 2007). …

Archaeoparasitology Of Chaco Canyon, Rachel Paseka

Department of Environmental Studies: Undergraduate Student Theses

Ancient cultures of the Colorado Plateau have been a focus of archaeoparasitology since its inception, and a vast parasitological history is recorded in coprolites preserved in this arid region. The inhabitants of Chaco Canyon dominated Ancestral Puebloan culture between 1050 and 1120 AD and were responsible for the construction of great towns, road systems, and early agriculture. Analysis of the parasites preserved in fecal remains contributes to an increased knowledge of ancient Chacoan health and culture. Nineteen coprolites from four sites in Chaco Canyon were rehydrated and analyzed microscopically for parasite remains. Rhabditiform and filariform nematode larvae were found from …

Structured Multiple Endosymbiosis Of Bacteria And Archaea In A Ciliate From Marine Sulfidic Sediments: A Survival Mechanism In Low Oxygen, Sulfidic Sediments?, Virginia P. Edgcomb, Edward R. Leadbetter, William A. Bourland, David Beaudoin, Joan M. Bernhard

William Bourland

Marine micro-oxic to sulfidic environments are sites of intensive biogeochemical cycling and elemental sequestration, where prokaryotes are major driving forces mediating carbon, nitrogen, sulfur, phosphorus, and metal cycles, important from both biogeochemical and evolutionary perspectives. Associations between single-celled eukaryotes and bacteria and/or archaea are common in such habitats. Here we describe a ciliate common in the micro-oxic to anoxic, typically sulfidic, sediments of Santa Barbara Basin (CA, USA). The ciliate is 95% similar to Parduzcia orbis (18S rRNA). Transmission electron micrographs reveal clusters of at least three different endobiont types organized within membrane-bound sub-cellular regions. Catalyzed reporter deposition–fluorescent in situ …

Performance Screening Of Chemostat Adapted Recombinant Zymomonas Mobilis Strains, Deirdre M. Beard, Nancy Dowe

STAR Program Research Presentations

Corn stover biomass can be pretreaed and hydrolyzed into soluble sugars to be fermented by microorganisms to ethanol. NREL has developed a recombinant bacteria Zymomonas mobilis 8b that metabolizes both five and six carbon sugars. During pretreatment, toxic inhibitors such as furfural and acetate are produced. NREL has made an attempt to adapt two sub-strains of Z. mobilis 8b to acetate and furfural by using a chemostat method. During the chemostat process, cultures were frozen back in glycerol and saved. In this study, those frozen cultures were revived and analyzed for performance in environments with varying concentrations of furfural and …

Effects Of Land Use In The Ohio River Basin On The Distribution Of Coliform And Antibiotic Resistant Bacteria In The Ohio River, Gene Chou

Theses, Dissertations and Capstones

Recent studies indicate that antibiotic resistant bacteria can be useful as indicators of water quality (1, 2, 5, 7, 8, 9, 10). Studies in our laboratory have shown that fecal pollution did not fully explain the distribution or the frequency of antibiotic resistant bacteria in the Ohio River (27, 28). Therefore, it is important to understand the factors that affect the distribution of antibiotic resistant bacteria in aquatic habitat. The purpose of this study was to examine the correlations between land use, water quality, and concentration of antibiotic resistant bacteria in the Ohio River. Mid-channel water samples were collected at …

A Messenger Molecule Governs Interdependency In An Evolved Pseudomonas Aeruginosa Biofilm Community, Thomas Macelliott Johnson

Honors Theses and Capstones

Biofilm populations are known to harbor great diversity, but the importance of this diversity is not fully understood. A likely contributor to this variation is the second messenger molecule cyclic-di-GMP: low levels associate with a planktonic lifestyle while high levels favor biofilm formation. In ongoing studies of an evolving biofilm population of Pseudomonas aeruginosa (PA), we observed extensive ecological diversification that may relate to this lifestyle switch. In PA, the gene bifA encodes a phosphodiesterase that is known to degrade cyclic-di-GMP and reduce biofilm. This gene was cloned onto a plasmid under control of an inducible promoter and the plasmid …

Dorsal Eye Selector Pannier (Pnr) Suppresses The Eye Fate To Define Dorsal Margin Of The Drosophila Eye, Sarah M. Oros, Meghana Tare, Madhuri Kango-Singh, Amit Singh

Biology Faculty Publications

Axial patterning is crucial for organogenesis. During Drosophila eye development, dorso-ventral (DV) axis determination is the first lineage restriction event. The eye primordium begins with a default ventral fate, on which the dorsal eye fate is established by expression of the GATA-1 transcription factor pannier (pnr). Earlier, it was suggested that loss of pnr function induces enlargement in the dorsal eye due to ectopic equator formation. Interestingly, we found that in addition to regulating DV patterning, pnr suppresses the eye fate by downregulating the core retinal determination genes eyes absent (eya), sine oculis (so) and dacshund (dac) to define the …

Evidence Base For The Use Of Selected Complementary And Alternative Therapies By Patients With Diabetes: Preface, Ruth Lindquist, Byron Hoogwerf

University Faculty Publications and Creative Works

No abstract provided.

Letter From The Dean, Lalit Verma

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

The Influence Of Early Experience On, And Inheritance Of, Cerebral Lateralization, Culum Brown, Jac Western, Victoria A. Braithwaite

Veterinary Science and Medicine Collection

Cerebral lateralization refers to the lateralized partitioning of cognitive function in either hemisphere of the brain. Using a standard detour test, we investigated lateralized behaviour in wild-caught, female poeciliid fish, Brachyraphis (=Brachyrhaphis) episcopi, from high- and low-predation areas. Wild fish were bred and their offspring reared under controlled laboratory conditions. These laboratory-reared fish were screened in the same laterality assays as their parents. We observed differences between wild-caught females and their laboratory-reared female offspring in the pattern of lateralization (tendency to use one hemisphere over the other to process information). Conversely, the strength of lateralization (consistency of hemispherical bias) was …

Properties Of Corneal Receptors In A Teleost Fish, Paul J. Ashley, Lynne U. Sneddon, Catherine R. Mccrohan

Veterinary Science and Medicine Collection

Corneal receptors have not previously been identified in lower vertebrates. The present study describes the properties of trigeminal ganglion corneal receptors in a teleost fish, the rainbow trout (Oncoryhnchus mykiss). Out of 27 receptors, 7 were polymodal nociceptors, 6 were mechanothermal nociceptors, 2 were mechanochemical receptors and the largest group, 12, were only responsive to mechanical stimulation. No cold responsive receptors were found on the trout cornea. Mechanical and thermal thresholds were lower and receptive field diameters smaller than those of cutaneous trigeminal receptors in the trout, demonstrating greater sensitivity in the cornea. The lack of cold sensitive neurons may …

Molecular Padlock Assay Of Crude Plant Leaf Extracts For Detection Of Listeria Monocytogenes, Allison L. Hurlburt

Electronic Theses and Dissertations

A molecular padlock assay was developed and assessed for detection of Listeria monocytogenes that operated in crude plant extracts. The molecular padlock assay was developed by Liu et al. (1996) and modified by Lizardi et al. (1998). We further modified and described a padlock probe that detected L. monocytogenes oligonucleotide, cDNA and genomic DNA containing a 16s rRNA sequence (GenBank Acc. No. X56 153). This technique was effective in the presence of crude potato leaf extracts in contrast to PCR, which failed to detect the presence of L. monocytogenes targets in crude leaf extracts. Sensitivity of the padlock procedure was …

Affinity Purification And Characterization Of E. Coli Molecular Chaperones, Seung-Hee Nam

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

The molecular chaperones are a group of proteins that are effective in vitro and in vivo folding aids and show a well documented affinity for proteins lacking tertiary structure.

Heat-induced Escherichia coli BL21 cell lysate (10 mg protein) was applied to immobilized ɑ-casein (45 mg/g beads) or β-casein (30 mg/g beads) column. After removing a majority of nonspecifically bound proteins with 1 M NaCl, the molecular chaperones were eluted with cold water, 1 mM Mg-ATP, or 6 M urea. Western analysis identified five Escherichia coli molecular chaperones including DnaK, DnaJ, GrpE, GroEL, and GroES. Among samples, ATP eluates showed the …

Genomic Organization Of Infectious Salmon Anemia Virus, Trent Rector

Electronic Theses and Dissertations

Infectious salmon anemia virus (ISAV) is an emerging pathogen of farmed Atlantic salmon (Salmo salar). The development of an effective ISA virus vaccine is a high priority for salmon producers in the U.S. and elsewhere. The process of developing a recombinant vaccine requires complete genetic characterization of the virus. Toward this end we have cloned, sequenced and determined the organization of the eight segments of single-stranded RNA from ISA virus isolate CCBB. The virus was grown in cell culture and purified by density gradient ultracentrifugation. Viral RNA was isolated from purified ISAV and used in the construction of two different …

A Common Pattern Of Somite Cell Rotation In Three Species Of Pipidae, Shou-Yuan Fan, Rafael O. De Sá, Gary P. Radice

Biology Faculty Publications

During amphibian somitogenesis, presumptive myotome cells change shape from round or polygonal to elongated and aligned parallel to the notochord (for reviews see Radice, et al., 1989; Keller, 2000). Although the final orientation of myotomal cells is always axial, the movements that achieve this final arrangement can differ greatly between species. The simplest movement is that seen in Bombina variegata, Pelobates fuscus, and Bufo bufo (Brustis et al., 1976; Brustis, 1979; Kielbowna, 1981 ). In these anurans, after segmentation myotomal cells simply elongate along the embryo’s anteroposterior axis. The urodeles Ambystoma mexicanum and Pleurodeles waltl have a very different pattern; …

A Comparative Study Of The Benthic Population In Weir Ponds Draining Watersheds Of The Fernow Experimental Forest, Parsons, West Virginia, Kevin Dwayne Brittingham

Theses, Dissertations and Capstones

A study of the benthos of weir ponds draining watersheds of the Fernow Experimental Forest (FEF) was conducted in 1994-1995. The objectives of this study were: (1) to relate differences in weir pond faunas to watershed treatments on the FEF, and (2) to compare current weir pond faunas to those described in 1973 by Steve Harris. In 1971-1972, there were fewer invertebrates but greater taxa richness than in 1994-1995. Total density varied among weir pond and between studies with numbers in the 1971- 1972 study ranging from 26,168 to 79,259 individuals collected, while numbers in the 1994-1995 study raged from …

Hyla Albopunctata, Rafael O. De Sá

Biology Faculty Publications

Hyla albopunctata is a medium-sized species in the albopunctata group, adults range in size from 42-52 mm SVL (males average 47 mm and females 49 mm). The head is triangular in outline, always longer than wide. The snout is moderately long and acuminate in dorsal view, whereas in lateral view, it is acuminate and protrudes beyond the mandible to form an angle of 45 degrees over the mandible. The canthus rostralis is rounded and distinct, the loreal region is slightly concave, and the internarial region is slightly convex. The eyes are large, approximately twice the diameter of the tympanum. The …

Effect Of Cold Shock On The Metabolism Of Trichomonas Gallinae, James J. Daly

Journal of the Arkansas Academy of Science

The influence of cold (4°C) used to prepare cells for metabolic investigations was examined with Trichomonas gallinae in this study. Cells washed with cold diluent in a refrigerated centrifuge were found to be less stimulated in their gas production at 37°C when exposed to glucose or maltose than cells washed at room temperature conditions. Such cold-prepared cells had higher initial glycogen contents after washing, faster endogenous glycogen degradation rates when incubated at 37 °C, but lower glycogen synthesis in the presence of glucose or maltose when compared to cells not prepared in the cold. However, uptake of glucose and maltose …

The Effects Of Temperature And Ph On The Differentiation Of Trypanosoma Lewisi (Kent, 1880) Laveran & Mesnil, 1901, In A Defined Medium, Carolann R. Rosario

Loma Linda University Electronic Theses, Dissertations & Projects

Trypanosoma lewisi is an arthropod-transmitted protozoan parasite found in the bloodstream of rats. In its life cycle it undergoes cellular differentiation. It is primarily found as the trypomastigote form in the rat and as the epimastigote form in the arthropod, the rat flea. Various studies have been done on hemoflagellates to determine the factors responsible for stimulating the differentiation from one form to the other. Included in these factors are pH, temperature, and protein fractions from fetal calf serum. Recent efforts have also been aimed at developing simple or defined media for physiological or biochemical studies on hemoflagellates. The purpose …

Karyotype Of Geomys Pinetis (Mammalia: Geomyidae), With A Discussion Of The Chromosomal Relationships Within The Genus, S. L. Williams, Hugh H. Genoways

University of Nebraska State Museum: Mammalogy Papers

Summary. Four of the five subspecies of Geomys pinetis were karyotyped. All specimens examined had a diploid number of 42 and a fundamental number of 80. This karyotype was compared with the described karyotypes of other species of Geomys and was considered to be derived from an ancestoral form having a karyotype of about 70 acrocentric elements.

Effects Of Insulin, Sodium And D-Glucose On Amino Acid Absorption In The Intestine Of Rats, Andre-Gerard Craan

Dissertations and Theses

Amino acid absorption across rat intestine in vitro was inhibited or stimulated by insulin depending on the hormone serosal concentration.

The absence of sodium ions from the incubating solution resulted in a significant decrease of L-alanine absorption. However, L-alanine was enhanced in a sodium-free medium by the addition of insulin on the serosal side of the intestine.

A sizable decrease in L-alanine and L-lysine absorption was produced by introduction of D-glucose (0.2 % and 2 %) in the Krebs-Ringer's incubating buffer. Nevertheless, the presence of D-glucose did not prevent the stimulatory effect of insulin on amino acid absorption.

Lactic Dehydrogenase Isozyme Isolation By Disc Electrophoresis In Eight Species Of Fringillid Birds, Michael Edwin Darling

Dissertations and Theses

Disc electrophoresis of tissue homogenates from eight species of fringillid birds showed five forms of lactic dehydrogenase. The relative amounts of isozymes were characteristic for each species. This paper classifies some members of the families Fringillidae and Carduelidae in terms of lactic dehydrogenase isozymes and compares the results to other methods of classification.

Natural History Of Thelazia Californiensis Price, 1930 (Nematoda: Thelaziidae), A Mammalian Eye Worm, Warren E. Parmelee

Loma Linda University Electronic Theses, Dissertations & Projects

Various factors—embryology, host associations, and seasonal changes In eye worn populations—tending to promote the propagation of T. califomlensls were studied.

The early embryology closely parallels that of other nematode species.

The mature embryos remain alive in saline at 35°C as long as 5 days. Dead embryos can be distinguished from living ones by virtue of the rapid staining by methylene blue by the former. Parturient female thelazias release embryos into saline, and embryos are found regularly in tear secretions of infected laboratory rabbits.

Ovic embryos possess an enveloping egg membrane containing chitin. On this account, this eye worm species is …

The Relation Between Metabolism And Potassium Cyanide Inhibition In Pelomyxa Carolinensis, Tatsuru Eugene Kimura

Open Access Master's Theses (through 2010)

1. Introductlon ( Respiratory System)

2. Introduction ( Protozoan Experiments)

3. Materials and Method

a . Experimental Organism

b. Barcroft-Warburg Micro-respirometer

c. Manometric Calibration

4 . Results

a . The Effect ot Temperature

b. The Effect of Potassium Cyanlde

5 . Discussion

6. Summary

7. Bibliography

The thesis investigates the following problems: (1) whether or not there is any correlation between temperature change and respiratory quotient, (2) whether or not respiratory inhibition by cyanides is influenced by temperature, and (3) whether or not the cytochrome-cytochrome oxidase type of respiratory system is concerned chiefly with carbohydrate metabolism in Pelomyxa carolinensis.