Marine Biology Commons^™

Fisheries Research Report No. 153 - A 12-Month Survey Of Recreational Fishing In The Pilbara Region Of Western Australia During 1999-2000, P C. Williamson, Neil R. Sumner, B E. Malseed

Fisheries Research Reports

A 12-month creel survey of recreational boat-based and shore-based fishing in the Pilbara region (Onslow to Broome inclusive) of Western Australia was conducted between December 1999 and November 2000. During the survey 3,085 boat crews were interviewed at public boat ramps when they returned from their fishing trips. Patrols conducted along the coastline interviewed 73 groups of boat-based fishers and 569 groups of shore-based fishers at fishing locations and camp sites.

The total annual recreational fishing effort for the Pilbara region was estimated to be 201,000 fisher days (95%CI: 193,000 – 210,000). This comprised 109,000 fisher days by boats launched …

Nh Department Of Health And Human Services Public Health Laboratories Shellfish Program Activities January 2005 - December 2005, Jayne S. Finnigan

PREP Reports & Publications

The Department of Health and Human Services-New Hampshire Public Health Laboratories (DHHS-NHPHL) has continued to carry out various actions providing laboratory analyses for the routine water quality monitoring, “Red Tide” monitoring, and additional testing after rainfall, excess sewage treatment plant, and emergency events. Also, a validation study was performed using non-EPA funds to compare results between the traditional Paralytic Shellfish Poison bioassay and a newer developed test allowed for screening use.

Nh Department Of Health And Human Services Public Health Laboratories Shellfish Program 2005, Jayne S. Finnigan

PREP Reports & Publications

The Department of Health and Human Services-New Hampshire Public Health Laboratories (DHHS-NHPHL) has continued to carry out various actions providing laboratory analyses for the routine water quality monitoring, “Red Tide” monitoring, and additional testing after rainfall, excess sewage treatment plant, and emergency events. Also, a validation study was performed using non-EPA funds to compare results between the traditional Paralytic Shellfish Poison bioassay and a newer developed test allowed for screening use.

Streamflow Monitoring In The Salmon Falls River, Phil Trowbridge, Steve Doyon

PREP Reports & Publications

The goal of this project was to provide data for one of the NHEP indicators of estuarine condition: NUT1. This indicator reports on “Annual load of nitrogen to the Great Bay from WWTF and watershed tributaries” (NHEP, 2004).

Soft-Shell Clam (Mya Arenaria) Distribution & Abundance At Selected Sites In The Great Bay Estuary, Raymond E. Grizzle, Jennifer K. Greene, Holly Abeels

PREP Reports & Publications

Previous surveys (1996 to 2002) provided distribution and abundance data for soft-shell clam (Mya arenaria) populations in ten areas of the Great Bay and Piscataqua River estuaries identified as potentially good clam habitat. The present study was designed to complete the overall survey by sampling six remaining areas: Weeks Point, Brackett's Point, Squamscott River mouth, Moody Point, Herods Cove, and Upper Little Bay (western shore). The objectives of the present project were to: (1) visually inspect the six study areas for the general distribution of sediment types and soft-shell clams, (2) quantitatively sample the six areas to determine densities of …

Circulation Of Tampa Bay Driven By Buoyancy, Tides, And Winds, As Simulated Using A Finite Volume Coastal Ocean Model, Robert H. Weisberg, Lianyuan Zheng

Marine Science Faculty Publications

The circulation of Tampa Bay is investigated using a high-resolution, three-dimensional, density-dependent, finite volume coastal ocean model (FVCOM) that includes Tampa Bay, the intracoastal waterway, and the inner portion of the west Florida continental shelf. Model performance over the three-month interval, September to November 2001, is assessed against available tide gauge and velocity profiler data before using the model to describe the circulation as driven by rivers, tides, and winds. Because of a mean wind velocity vector directed down the estuary axis, we ran a parallel model experiment without winds to distinguish the estuarine circulation by gravitational convection from the …

Fractal Patterns Of Coral Communities: Evidence From Remote Sensing (Arabian Gulf, Dubai, U.A.E.), Samuel J. Purkis, Bernhard Riegl, Richard E. Dodge (Editor)

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

In this study, the spatial character of benthic communities is investigated in an Arabian Gulf shallow subtidal carbonate ramp setting, using IKONOS satellite imagery. The patchy distribution of three assemblages of live and dead corals on extensive (but also fragmented) hardground pavements was investigated using a variety of spatial statistics. It was found that the spatial expression of the benthic groups display characteristics that approximate to power-law distributions over several orders of magnitude to an extent that suggests fractal behaviour. Pronounced anisotropy was observed between the spatial patterns in the near-shore and off-shore region which is attributed to different mechanisms …

Occurrence And Distribution Of Multi-Antibiotic Resistant Bacteria From The Great Kanawha River, West Virginia, April Dawn Keenan

Theses, Dissertations and Capstones

During the spring and summer of 2004 subsurface mid-channel samples were collected from the Kanawha River and its five primary tributaries (New, Gauley, Elk, Coal and Pocatalico Rivers). The first two objectives of this study were to enumerate bacteria resistant to ciprofloxacin, erythromycin or tetracycline, and test them for multiple resistance to seven commonly used antibiotics. The third objective was to determine the Minimum Inhibitory Concentration (MIC) for seven antibiotics starting at concentrations 20 times the published working concentrations for Gram-negative bacteria. The final objective of this study was to determine if a novel Impact Scoring system incorporating a current …

Benthic Nutrient Flux In A Small Estuary In Northwestern Florida (Usa), Guy T. Didonato, Emile M. Lores, Michael C. Murrell, Lisa M. Smith, Jane M. Caffrey

Gulf and Caribbean Research

Benthic nutrient fluxes of ammonium (NH₄⁺), nitrite/nitrate (NO₂^- + NO₃^-), phosphate (PO₄^-3), and dissolved silica (DSi) were measured in Escambia Bay, an estuary within the larger Pensacola Bay system of northwestern Florida (USA). Our study occurred during a severe drought which reduced riverine inputs to Escambia Bay. Laboratory incubations of field-collected cores were conducted on 8 dates between June and October 2000 to estimate nutrient flux, and cores were collected from locations exhibiting a range of sediment organic matter content. NH₄⁺ flux ranged from – 48.1 to …

Feeding Habits Of Common Snook, Centropomus Undecimalis, In Charlotte Harbor, Florida, David A. Blewett, Rebecca A. Hensley, Philip W. Stevens

Gulf and Caribbean Research

We examined the feeding habits, ontogenetic and seasonal diet variations, and predator size–prey size relationships of common snook, Centropomus undecimalis, in Charlotte Harbor, Florida, through stomach contents analysis. A total of 694 stomachs were extracted from common snook (300–882 mm standard length [SL]) during a 24-month period (March 2000–February 2002); 432 stomachs contained prey items. At least 37 prey taxa were identified, including 19 that had not been previously reported. Fishes made up 71% of the prey by number and 90% by weight. Three prey items made up almost 50% of the diet numerically—Lagodon rhomboides, Anchoa spp., …

Comparison Of Fish Assemblages And Water Quality In Two Marinas In The British Virgin Islands, Brian Gratwicke, Martin R. Speight

Gulf and Caribbean Research

Eutrophication is a widespread problem in tropical marine environments that leads to the increase of nutrients in a water body, usually nitrate and phosphate, and is usually associated with the discharge of untreated sewage, intensive farming or fertilizer-enriched agricultural runoff (Wu 1999). Common symptoms are increased N and P levels, increased macroalgal production in shallow areas, reduced dissolved oxygen, loss of seagrass and coral habitats and changes in the fish community (Hallock and Schlager 1986, Granelli et al. 1990, Valiela 1995, Hemminga and Duarte 2000). Direct chemical testing to establish pollution levels can be difficult because of sharp pollution gradients, …

Body Size Of The Endosymbiotic Pea Crab Tumidotheres Maculatus: Larger Hosts Hold Larger Crabs, Karen Kane, Gregory S. Farley

Gulf and Caribbean Research

The endosymbiotic pea crab, Tumidotheres maculatus, uses a broad range of host taxa, including several bivalve species, in the northern Gulf of Mexico. Because shelter size affects the size of other, free-living crab species, we hypothesized that pea crabs living in larger bivalve hosts should attain larger sizes. Crabs and hosts collected from 3 field sites in northern Florida show this trend. We examined crabs living in a large host, the pen shell Atrina rigida, and found them to be larger than pea crabs living in a small host, the bay scallop Argopecten irradians. Moreover, this trend …

Marionia Tedi Ev. Marcus, 1983 (Nudibranchia, Tritoniidae) In The Gulf Of Mexico: First Record Of An Opisthobranch Mollusk From Hydrocarbon Cold Seeps, Angel Valdes

Gulf and Caribbean Research

Cold seeps in the Gulf of Mexico contain relatively diverse molluscan assemblages primarily composed of species that support chemoautotrophic symbionts, such as vesicomyid and mytilid bivalves, but also numerous species of shelled gastropods, bivalves, monoplacophorans, and polyplacophorans (Cordes 2004).

Recent exploration of hydrocarbon seep sites in the Mississippi Canyon and the Vioska Knoll revealed the presence of an unidentified species of nudibranch. The present paper describes the single specimen collected, which constitutes the first published record of an opisthobranch mollusk from a cold seep. The material examined is deposited at the Field Museum of Natural History (FMNH).

New Records For Cubanocuma Gutzui Băcescu And Muradian, 1977 (Crustacea: Cumacea: Nannastacidae) From The Western Atlantic, Richard W. Heard, Joel W. Martin, Thomas J. Hansknecht, Donald B. Cadien

Gulf and Caribbean Research

Because the original description and many subsequent records for Cubanocuma gutzui have appeared in a Romanian journal, Travaux du Muséum d’Histoire naturelle “Grigore Antipa,” which has limited distribution in the west, many workers studying tropical western Atlantic crustaceans still remain unaware of both the genus and species. Also, the species may have gone unrecognized (recorded as an odd specimen of Campylaspis, for instance) or may have been overlooked because of its small size. As part of an ongoing survey of the marine invertebrates of Guana Island, British Virgin Islands (BVI) (led by T.L. Zimmerman and J.W. Martin), numerous specimens …

Buffers: Protecting Water Resources, New Hampshire Estuaries Project

PREP Reports & Publications

Brochure for NH communities by the New Hampshire Estuaries Project. To help your community understand the importance of buffers and what can be done to protect them.

Nh Department Of Environmental Services Shellfish Program Activities, January 2005-December 2005, Chris Nash

PREP Reports & Publications

This report summarizes the activities of the NH Department of Environmental Services (NHDES) Shellfish Program for the period of January 2005 to December 2005, emphasizing those tasks for which NHDES received direct funding from the NH Estuaries Project. The NHDES Shellfish Program conducts a number of activities to minimize the health risks associated with consuming shellfish, and to continue to comply with National Shellfish Sanitation Program guidelines. Among basic program functions are a routine water quality monitoring program, “red tide” monitoring, and a pollution source identification and evaluation program. These sampling programs are supplemented by other activities aimed at improving …

Application Of Paleoclimatology To Coral Reef Monitoring And Management, C. Mark Eakin, Peter K. Swart, Terrence M. Quinn, Kevin P. Helmle, Jennifer M. Smith, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The skeletons of reef-building corals are valuable archives of climatic and environmental information. Paleoclimatic data chiefly have been generated in areas most sensitive to global or regional climatic variability. However, these records also provide valuable information on anthropogenic influences – guidance of value to resource managers. NOAA’s Coral Reef Watch targets observations of current and past coral reef health in or near marine protected areas through satellites, in situ sensor platforms, and paleoclimatic analyses. Paleoclimatic data provide retrospective monitoring through multi-century environmental reconstructions that improve our understanding of past stress to coral reefs. Two sites in the Florida Keys National …

Validation Of Water Flux And Body Composition In Glaucous Gulls (Larus Hyperboreus), Scott A. Shaffer, Gabrielsen, G.W., Verreault, J, Costa, D.P

Faculty Publications, Biological Sciences

Water influx rates (WIR) measured with tritiated water dilution were compared with direct measures of water and energy intake in glaucous gulls (Larus hyperboreus). Total body water (TBW) measured isotopically was also compared with TBW determined by body composition analysis (BCA) of the same birds. Seventeen wild gulls were captured and studied in outdoor enclosures at Ny-Ålesund, Svalbard, in July 2002. Gulls were hand-fed known quantities of Arctic cod (Boreogadus saida) or given water on the basis of one of four experimental treatments: (A) fasting, (B) fish only, (C) water only, or (D) fish and water. Water and energy content …

A Database For The Study Of Marine Mammal Behavior: Gap Analysis, Data Standardization, And Future Directions, Scott A. Shaffer, D P. Costa

Faculty Publications, Biological Sciences

A relational database that contained published information on the diving behavior and/or movement patterns of marine mammals was compiled to facilitate a modeling effort of the Effects of Sound on the Marine Environment (ESME) program. A total of 448 references from reports, books, and peer-reviewed journal articles were obtained. The metadata describing each animal studied, location of the study, and equipment used were entered into the database as well as empirical data describing the diving behavior and movement patterns of each animal. In total, the database contained 1815 entries from 51 different marine mammal species or subspecies. The majority of …

Interpolation Of Tracking Data In A Fluid Environment, Y Tremblay, Scott A. Shaffer, S L. Fowler, C E. Kuhn, B I. Mcdonald, M J. Weise, C -A Bost, H Weimerskirch, D E. Crocker, M E. Goebel, D P. Costa

Faculty Publications, Biological Sciences

Interpolation of geolocation or Argos tracking data is a necessity for habitat use analyses of marine vertebrates. In a fluid marine environment, characterized by curvilinear structures, linearly interpolated track data are not realistic. Based on these two facts, we interpolated tracking data from albatrosses, penguins, boobies, sea lions, fur seals and elephant seals using six mathematical algorithms. Given their popularity in mathematical computing, we chose Bézier, hermite and cubic splines, in addition to a commonly used linear algorithm to interpolate data. Performance of interpolation methods was compared with different temporal resolutions representative of the less-precise geolocation and the more-precise Argos …

Fisheries Research Report No 154 - The Development Of A Rigorous Sampling Methodology For A Long-Term Annual Index Of Recruitment For Finfish Species From South-Western Australia., Daniel J. Gaughan, Suzanne G. Ayvazian, G Nowara, M Craine

Fisheries Research Reports

Final FRDC Report - 1999/153.

This study has determined the optimal strategies to achieve statistically robust indices of recruitment of five key finfish species in south-western Australia. For another two species such indices could not be established. The sampling strategies developed will initially focus on the most appropriate location, month, and lunar phase, after which fine tuning of the sampling activity will be undertaken with respect to time of day, tide height, weather conditions etc. A significant outcome from the project is that five finfish species have a sampling strategy for recruits that can be utilized as a monitoring program …

Recommended Management Arrangements For The West Coast Commercial 'Wetline' Fishery. A Report To The Minister For Fisheries., West Coast And Gascoyne Management Planning Panel.

Fisheries Management Papers

No abstract provided.

Recommended Access And Allocation Criteria For The West Coast And Gascoyne Commercial 'Wetline' Fisheries. A Report To The Ministry Of Fisheries., The Commercial Access Panel.

Fisheries Management Papers

The CAP’s primary responsibility was to develop criteria for access and allocation within the context of the management framework developed by the MPP. It is therefore important that this management paper is read in conjunction with the papers prepared by the MPP that outline the recommended management arrangements for the Gascoyne (Fisheries Management Paper No. 205) and the West Coast (Fisheries Management Paper No. 206) regions.

Assessment Of Western Rock Lobster Strategic Management Options. A Bio-Economic Evaluation Of Management Options For The West Coast Rock Lobster Fishery. Vol. 2, Economic Research Associates Pty Ltd

Fisheries Management Papers

Economic Research Associates (ERA) was commissioned to evaluate the relative ‘socio-economic’ benefits of alternative management Scenarios for the Western Rock Lobster Managed Fishery. This study is intended as input into industry’s consideration of the future management policy direction for the fishery.

Growth And Survivorship Of Scleractinian Coral Transplants And The Effectiveness Of Plugging Core Holes In Transplant Donor Colonies, Elizabeth Glynn Fahy, Richard E. Dodge, Daniel P. Fahy, T. Patrick Quinn, David S. Gilliam, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Replicate scleractinian coral transplants were obtained from the species Meandrina meandrites and Montastrea cavernosa on a natural reef, off Dania Beach, Florida, using a hydraulic drill fitted with a 4 in. (~10 cm) core barrel. The transplants were fixed to Reef Ball™ substrates using an adhesive marine epoxy. Drill holes in the donor corals (core holes) were filled with concrete plugs. Control corals, of comparable size to both donor colonies and transplant corals, were monitored for comparison. Transplant corals, donor corals, and controls on the natural reef were monitored for growth and survivorship. Core holes were monitored for tissue regrowth …

Spatial Patterns In Arabian Gulf Coral Assemblages (Jebel Ali, Dubai, U.A.E.) In Response To Temperature-Forcing, Bernhard Riegl, Samuel J. Purkis, Kevin E. Kohler, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

We evaluated spatial and temporal patterns using maps from Ikonos satellite imagery in combination with 8 years of line transects and photosquares and the HadISST1 sea-surface temperature data set to explain why coral assemblages in the southern Arabian Gulf (Dubai) are impoverished and mostly do not build framework reefs. Analysis of archive sea surface temperature (SST) data confirms that the area is subjected to recurrent temperature anomalies. Frequencies of anomalies might suggest at least a partial link to the El Niño Southern Oscillation possibly via the Indian Ocean Zonal Mode. The dominant driver of local temperature was oscillations in the …

An Experimental Histopathological Rating Scale Of Sedimentation Stress In The Caribbean Coral Montastraea Cavernosa, Bernardo Vargas-Ángel, Bernhard Riegl, David S. Gilliam, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Colonies of Montastraea cavernosa were exposed to daily applications of approx. 200–225 mg cm– 2 sediments, during a four-week period, in order to investigate coral responses to increased sedimentation. Effects were assessed based on the histopathological condition of specimen tissues. Mild stress responses were noted as early as week one, including tissue swelling and polyp retraction, as well as changes in size and appearance of mucous secretory cells. As stress progressed, further inflammation of the mucous secretory cells was observed. Severe effects were observed in weeks 3 and 4, including atrophy of the outer epidermis, increased granularity and debris in …

Tires: Unstable Materials For Artificial Reef Construction, Robin L. Sherman, Richard E. Spieler

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Artificial reefs of varied materials have been deployed worldwide to acquire large and diverse fish assemblages for both commercial and sport fishers, and SCUBA divers. Beginning in 1967, environmental resource managers and local fishers initiated a project to build an artificial reef using banded, but unballasted, waste automobile and truck tires offshore Broward County, Florida, USA. Estimates of the number of tires placed offshore range between 1,000,000– 2,000,000. Since deployment, storm events and ocean currents have caused the bands to give way and the break-up of the reef. Over the years, many tires have washed ashore onto recreational beach areas. …

Visual_Hea: Habitat Equivalency Analysis Software To Calculate Compensatory Restoration Following Natural Resource Injury, Kevin E. Kohler, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Habitat Equivalency Analysis (HEA) is a means to determine the amount of compensatory restoration required to provide services that are equivalent to the interim loss of natural resource services following an injury. HEA includes a discounting procedure to account for asset valuation in that the total asset value is equal to the discounted value of the future stream of all services from the natural resource or the compensatory resource. Discounting is used to include the relative valuation of loss and gain of ecological services of the resources over time. Visual_HEA is a computer program developed to calculate the amount of …

Coral Of Opportunity Survivorship And The Use Of Coral Nurseries In Coral Reef Restoration, Jamie A. Monty, David S. Gilliam, Kenneth Banks, David K. Stout, Richard E. Dodge

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

Coral reef damage is unfortunately becoming a common occurrence off southeast Florida, U.S.A. Reattachment of the dislodged scleractinian corals usually initiates damage site restoration. Because mortality of dislodged colonies is typically high and natural recovery in southeast Florida is typically slow, transplantation of additional scleractinian corals into a damaged area has been used to accelerate reef recovery. Donor colonies available for transplantation have been grown in situ, grown in laboratories, and taken from nondamaged reef areas. An alternative source of donor colonies for transplantation into damaged sites is “corals of opportunity,” which we define as scleractinian corals that have been …