Population Biology Commons^™

An Investigation Of Juvenile Alewife (Alosa Pseudoharengus) Habitat Use And Growth Using Natural Markers, Gregory Norman Labonte Ms

All Student Scholarship

This research attempts to connect patterns in growth and migration of an anadromous species. The goal of this research was to understand habitat movements and growth of juvenile alewives (Alosa pseudoharengus) in the Penobscot Estuary and Bay through the use of otolith microchemistry, otolith growth increments, and a laboratory stable isotope turnover study. Understanding the connection between growth and movement of juvenile alewives may lead to more accurate and sophisticated conservation and restoration methods for anadromous species.

Genetic Analyses Determine Connectivity Among Cave And Surface Populations Of The Jamaican Endemic Freshwater Crab Sesarma Fossarum In The Cockpit Country, Manuel Stemmer, Christoph D. Schubart

International Journal of Speleology

The Jamaican freshwater crab Sesarma fossarum (Decapoda: Brachyura: Sesarmidae) is endemic to western central Jamaica where it occurs in cave and surface streams of karst regions. In the present study, we examine the population genetic structure of the species, providing evidence for intraspecific differentiation and genetic substructure among twelve sampled populations. Interestingly, crabs from caves appear genetically undistinguishable from representatives of nearby surface waters, despite previously observed and described morphometric differentiation. In contrast, genetic isolation takes place among populations from rivers and caves belonging to different watersheds. In one case, even populations from different tributaries of the same river were …

Examining Temporal Sample Scale And Model Choice With Spatial Capture-Recapture Models In The Common Leopard Panthera Pardus, Joshua F. Goldberg, Tshering Tempa, Nawang Norbu, Mark Hebblewhite, L. Scott Mills, Tshewang R. Wangchuk, Paul Lukacs

Wildlife Biology Faculty Publications

Many large carnivores occupy a wide geographic distribution, and face treats from habitat loss and fragmentation, poaching, prey depletion, and human wildlife-conflicts. Conservation requires robust techniques for estimating population densities and trends, but the elusive nature and low densities of many large carnivores make them difficult to detect. Spatial capture-recapture (SCR) models provide a means for handling imperfect detectability, while linking population estimates to individual movement patterns to provide more accurate estimates than standard approaches. Within this framework, we investigate the effect of different sample interval lengths on density estimates, using simulations and a common leopard (Panthera pardus) …

Updated Marine Mammal Distribution And Abundance Estimates In British Columbia, Benjamin D. Best, Caroline H. Fox, Rob Williams, Patrick H. Halpin, Paul C. Paquet

Population Distribution and Habitat Collection

Information relating to the distribution and abundance of species is critical for effective conservation and management. For many species, including cetacean species of conservation concern, abundance estimates are lacking, out of date and/or highly uncertain. Systematic, line-transect marine mammal surveys were conducted in British Columbia’s (BC) coastal waters over multiple years and seasons (summer 2004, 2005, 2008, and spring/autumn 2007). In total, 10,057km of transects were surveyed in an 83,547km2 study area. Abundance estimates were calculated using two different methods: Conventional Distance Sampling (CDS) and Density Surface Modelling (DSM). CDS generates a single density estimate for each stratum, whereas DSM …

Observations Of Hippopotamus H. Amphibius In The Little Scarcies River Of Sierra Leone And Arguments For Their Conservation Based On Roles They Play In Riverine Grasslands And Nutrient Loading, Lindsey R. Perry

Dissertations, Master's Theses and Master's Reports

A small population of Hippopotamus amphibius remains in Sierra Leone and conservation efforts may be needed to support the Hippos and their indirect benefits to fisheries and grassland production. The hippo is a known ecosystem engineer, and a potentially important contributor of nutrients to the river systems they inhabit supporting the food web and local fisheries. In this study I observed hippos in the Little Scarcies River and uplands of the Outamba-Kilimi National Park to estimate their numbers and ultimately their potential input of nutrients into the river. Hippos forage at night in grasslands neighboring rivers, removing up to 3.62 …

Spatiotemporal Variation In Flow-Dependent Recruitment Of Long-Lived Riverine Fish: Model Development And Evaluation, Daisuke Goto, Martin J. Hamel, Jeremy J. Hammen, Mathew L. Rugg, Mark A. Pegg, Valery E. Forbes

School of Biological Sciences: Faculty Publications

Abstract Natural flow regimes can play a major role as an overarching ecosystem driver in reproduction and recruitment of riverine fishes. Human needs for freshwater however have altered hydrology of many riverine systems worldwide, threatening fish population sustainability. To understand and predict how spatiotemporal dynamics of flow regimes influence reproductive and recruitment variability, and ultimately population sustainability of shovelnose sturgeon (Scaphirhynchus platorynchus), we develop a spatially explicit (1D) individual-based population model that mechanistically (via energetics-based processes) simulates daily activities (dispersal, spawning, foraging, growth, and survival). With field observations of sturgeon and habitat conditions in a major tributary of …

Indigenous Knowledge And Science Unite To Reveal Spatial And Temporal Dimensions Of Distributional Shift In Wildlife Of Conservation Concern, Christina N. Service, Megan S. Adams, Kyle A. Artelle, Paul C. Paquet, Laura V. Grant, Chris T. Darimont

Population Distribution and Habitat Collection

Range shifts among wildlife can occur rapidly and impose cascading ecological, economic, and cultural consequences. However, occurrence data used to define distributional limits derived from scientific approaches are often outdated for wide ranging and elusive species, especially in remote environments. Accordingly, our aim was to amalgamate indigenous and western scientific evidence of grizzly bear (Ursus arctos horribilis) records and detail a potential range shift on the central coast of British Columbia, Canada. In addition, we test the hypothesis that data from each method yield similar results, as well as illustrate the complementary nature of this coupled approach. Combining information from …

The Neotropical Genus Austrolebias: An Emerging Model Of Annual Killifishes, Nibia Berois, María J. Arezo, Rafael O. De Sá

Biology Faculty Publications

Annual fishes are found in both Africa and South America occupying ephemeral ponds that dried seasonally. Neotropical annual fishes are members of the family Rivulidae that consist of both annual and non-annual fishes. Annual species are characterized by a prolonged embryonic development and a relatively short adult life.

Males and females show striking sexual dimorphisms, complex courtship, and mating behaviors. The prolonged embryonic stage has several traits including embryos that are resistant to desiccation and undergo up to three reversible developmental arrests until hatching. These unique developmental adaptations are closely related to the annual fish life cycle and are the …

Averting Lemur Extinctions Amid Madagascar's Political Crisis, Christoph Schwitzer, Russell Mittermeier, Steig Johnson, Giuseppe Donati, Mitchell Irwin, Heather Peacock, Jonah Ratsimbazafy, Josia Razafindramanana, Edward E. Louis, Lounes Chikhi, Ian C. Colquhoun, Jennifer Tinsman, Ranier Dolch, Marni Lafleur, Stephen Nash, Erik Patel, Blanchard Randrianambinina, Tove Rasolofoharivelo, Patricia C. Wright

Anthropology Publications

The most threatened mammal group on Earth, Madagascar’s five endemic lemur families (lemurs are found nowhere else), represent more than 20% of the world’s primate species and 30% of family-level diversity. This combination of diversity and uniqueness is unmatched by any other country—remarkable considering that Madagascar is only 1.3 to 2.9% the size of the Neotropics, Africa, or Asia, the other three landmasses where nonhuman primates occur. But lemurs face extinction risks driven by human disturbance of forest habitats. We discuss these challenges and reasons for hope in light of site-specific, local actions proposed in an emergency conservation action plan.

Grizzly Bear Monitoring By The Heiltsuk People As A Crucible For First Nation Conservation Practice, William G. Housty, Anna Noson, Gerald W. Scoville, John Boulanger, Richard M. Jeo, Chris T. Darimont, Christopher E. Filardi

Wildlife Population Management Collection

Guided by deeply held cultural values, First Nations in Canada are rapidly regaining legal authority to manage natural resources. We present a research collaboration among academics, tribal government, provincial and federal government, resource managers, conservation practitioners, and community leaders supporting First Nation resource authority and stewardship. First, we present results from a molecular genetics study of grizzly bears inhabiting an important conservation area within the territory of the Heiltsuk First Nation in coastal British Columbia. Noninvasive hair sampling occurred between 2006 and 2009 in the Koeye watershed, a stronghold for grizzly bears, salmon, and Heiltsuk people. Molecular demographic analyses revealed …

Grizzly Bear Monitoring By The Heiltsuk People As A Crucible For First Nation Conservation Practice, William G. Housty, Anna Noson, Gerald W. Scoville, John Boulanger, Richard M. Jeo, Chris T. Darimont, Christopher E. Filardi

All Faculty Scholarship for the College of the Sciences

Guided by deeply held cultural values, First Nations in Canada are rapidly regaining legal authority to manage natural resources. We present a research collaboration among academics, tribal government, provincial and federal government, resource managers, conservation practitioners, and community leaders supporting First Nation resource authority and stewardship. First, we present results from a molecular genetics study of grizzly bears inhabiting an important conservation area within the territory of the Heiltsuk First Nation in coastal British Columbia. Noninvasive hair sampling occurred between 2006 and 2009 in the Koeye watershed, a stronghold for grizzly bears, salmon, and Heiltsuk people. Molecular demographic analyses revealed …

Photo-Identification Methods Reveal Seasonal And Long-Term Site-Fidelity Of Risso’S Dolphins (Grampus Griseus) In Shallow Waters (Cardigan Bay, Wales), Marijke N. De Boer, Josephine Clark, Mardik F. Leopold, Mark P. Simmonds, Peter J.H. Reijnders

Ecology Collection

A photo-identification study on Risso’s dolphins was carried out off Bardsey Island in Wales (July to September, 1997-2007). Their local abundance was estimated using two different analytical techniques: 1) mark-recapture of well-marked dolphins using a “closed-population” model; and 2) a census technique based on the total number of iden-tified individual dolphins sighted over the study period. The mark-recapture estimates of 121 (left sides; 64 - 178, 95% CI; CV 0.24) and 145 dolphins (right sides; 78 - 213, 95% CI; CV 0.24) closely matched the census technique estimates (population size of 90 - 151). It was found that the dolphins …

A Framework To Evaluate Wildlife Feeding In Research, Wildlife Management, Tourism And Recreation, Sara Dubois, David Fraser

Wildlife Population Management Collection

Feeding of wildlife occurs in the context of research, wildlife management, tourism and in opportunistic ways. A review of examples shows that although feeding is often motivated by good intentions, it can lead to problems of public safety and conservation and be detrimental to the welfare of the animals. Examples from British Columbia illustrate the problems (nuisance animal activity, public safety risk) and consequences (culling, translocation) that often arise from uncontrolled feeding. Three features of wildlife feeding can be distinguished: the feasibility of control, the effects on conservation and the effects on animal welfare. An evaluative framework incorporating these three …

Interactions Between Short-Beaked Common Dolphin (Delphinus Delphis) And The Winter Pelagic Pair-Trawl Fishery Ff Southwest England (Uk), Marijke N. De Boer, James T. Saulino, Mardik F. Leopold, Peter J.H. Reijnders, Mark P. Simmonds

Aquaculture Collection

During offshore and onshore studies (2004 to 2009), the interactions between pair-trawls and short-beaked common dolphins (Delphinus delphis) were studied to better understand the impact of bycatch. A ‘hotspot’ area where pair-trawls overlapped with high dolphin abundance was identified. We made comparisons between boat-based data collected in absence and presence of pair-trawlers. The relative abundance and group-size of dolphins was significantly higher in the presence of pair-trawlers. Dolphins were observed associating with towing and hauling procedures. Significantly, more carcasses occurred in areas with hauling-activity than those without. Body-temperatures obtained from carcasses found near operating pair-trawlers indicated that bycatch mostly occurred …

High Prevalence Of The Amphibian Chytrid Fungus (Batrachochytrium Dendrobatidis) Across Multiple Taxa And Localities In The Highlands Of Ethiopia, David J. Gower, Thomas M. Doherty-Bone, Roman K. Aberra, Abebe Mengistu, Silvia Schwaller, Michele Menegon, Rafael O. De Sá, Samy A. Saber, Andrew A. Cunningham, Simon P. Loader

Biology Faculty Publications

Surveys of the potentially lethal amphibian chytrid fungus (Batrachochytrium dendrobatidis - Bd) in Africa are patchy, especially in some regions of high species endemicity. We present results of the first Bd surveys of wild amphibians in Ethiopia, for two upland regions on either side of the Rift Valley: the Bale Mountains and the Kaffa region. Surveys were opportunistic so that robust interpretation of the data is limited. Utilizing diagnostic qPCR assays, 51 out of 120 frogs (14 species in 10 genera) tested positive for Bd at altitudes of 1,620–3,225 m, across all genera and species, and all but …

Whaling: Don’T Trade The Moratorium Away, Mark Peter Simmonds, Sue Fisher

Conservation Collection

In their proposal to allocate ‘whale shares’ to both whalers and conservationists as an alternative to the International Whaling Commission (IWC) moratorium on commercial whaling, Christopher Costello and colleagues overlook several factors (Nature 481, 139–140; 2012).

The Fine-Scale Habitat Use Of Risso’S Dolphins Off Bardsey Island, Cardigan Bay (Uk), Marijke N. De Boer, Sonja Eisfeld, Mark P. Simmonds

Ecology Collection

The main objectives of this study were (1) to estimate the population size of Risso’s dolphins off Bardsey Island using mark-recapture techniques (De Boer et al., 2013); and (2) to study habitat-use in relation to fine-scale oceanographic features. This work provides preliminary information on the habitat-use of Risso’s dolphins and will benefit future studies, along with the development of effective conservation measures for this species throughout the region.

Phylogeography Of A Vanishing North American Songbird: The Painted Bunting (Passerina Ciris), Connie Ann Herr

UNLV Theses, Dissertations, Professional Papers, and Capstones

Studies of genetic variation within and between species can provide insights into their evolutionary history as well as important information for conserving biodiversity. An understanding of population processes can assist in the conservation of biodiversity by contrasting current versus historical patterns, and the processes that have generated these patterns. Genetic differentiation often coincides with significant geological or climatic changes that have shaped the sizes and locations of the species geographic range and altered the connectivity between populations over time. Phylogenetic and population genetic analyses can also provide a statistical framework for the investigation of how human processes such as habitat …

Microclimate Preferences Of The Grey-Headed Flying Fox (Pteropus Poliocephalus) In The Sydney Region, Stephanie T. Snoyman, Culum Brown

Sentience Collection

The population size of the grey-headed flying fox (Pteropus poliocephalus) has decreased dramatically as a result of a variety of threatening processes. This species spends a great proportion of time in roosting large social aggregations in urban areas, causing conflict between wildlife and humans. Little is known about why these bats choose to roost in some locations in preference to others. Roost selection by cave-dwelling bats can be greatly influenced by microclimatic variables; however, far less is known about microclimate selection in tree-roosting species despite the direct management implications. This study aimed to determine the microclimate characteristics of P. poliocephalus …

Conserving Migratory Land Birds In The New World: Do We Know Enough?, John Faaborg, Richard T. Holmes, Angela D. Anders, Keith L. Bildstein

Dartmouth Scholarship

Migratory bird needs must be met during four phases of the year: breeding season, fall migration, wintering, and spring migration; thus, management may be needed during all four phases. The bulk of research and management has focused on the breeding season, although several issues remain unsettled, including the spatial extent of habitat influences on fitness and the importance of habitat on the breeding grounds used after breeding. Although detailed investigations have shed light on the ecology and population dynamics of a few avian species, knowledge is sketchy for most species. Replication of comprehensive studies is needed for multiple species across …

Do Zoos And Aquariums Promote Attitude Change In Visitors? A Critical Evaluation Of The American Zoo And Aquarium Study, Lori Marino, Scott O. Lilienfeld, Randy Malamud, Nathan Nobis, Ron Broglio

Zoos and Aquariums Collection

Modern-day zoos and aquariums market themselves as places of education and conservation. A recent study conducted by the American Zoo and Aquarium Association (AZA) (Falk et al., 2007) is being widely heralded as the first direct evidence that visits to zoos and aquariums produce long-term positive effects on people’s attitudes toward other animals. In this paper, we address whether this conclusion is warranted by analyzing the study’s methodological soundness. We conclude that Falk et al. (2007) contains at least six major threats to methodological validity that undermine the authors’ conclusions. There remains no compelling evidence for the claim that zoos …

Temporal Shifts In Demography And Life History Of An Anadromous Alewife Population In Connecticut, Justin P. Davis, Eric T. Schultz

EEB Articles

Populations of anadromous alewives (Alosa pseudoharengus) are declining throughout much of their range, particularly in southern New England where fishery moratoriums have recently been instituted in three states. The alewife run at Bride Brook, a coastal stream in East Lyme, Connecticut, was studied from 2003-06 to assess shifts in demography and life history. Annual censuses of abundance, along with sampling for size, age, and spawning history structure were conducted. These data were compared to similar data in 1966-67 at this site. Recent alewife runs at Bride Brook featured lower abundance and younger, smaller fish that were less likely to be …

Biology And Conservation Of Horseshoe Crabs, John T. Tanacredi, Mark L. Bottom, David R. Smith

School of Marine and Environmental Sciences Faculty and Staff Publications and Presentations

We dedicate this book to Drs. Carl N. Shuster, Jr. and Koichi Sekiguchi for their life-long contributions to the biology and conservation of the magnificent horseshoe crab.

The Horseshoe Crab Conundrum: Can We Harvest And Conserve?, Jennifer Mattei, Mark Beekey

Biology Faculty Publications

Horeshoe crabs "Limulus polyphemus" are remarkable ‘living fossils’ which have unique blood cells (amebocytes) that are used to test human vaccines for bacterial contamination. In the 1950’s, scientists at the Marine Biological Laboratory in Woods Hole, Massachusetts, not only discovered amebocytes but also found that they had special properties. If the amebocytes came into contact with bacteria, they would instantly coagulate around the bacteria and attack it. The Woods Hole scientists took this unique property of horseshoe crabs and developed a test for bacterial contamination using a horseshoe crab blood derivative called Limulus Amebocyte Lysate (LAL).

This article describes discusses …

The Emerging Dziggetai (Equidae: Equus Hemionus Pallas): An Illustrated History Of Taxonomic Concepts For The Identification, Classification, And Distribution Of Hemiones From Central Asia, Arnd Schreiber

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The history of the discovery and the exploration of the hemione populations (Equus hemionus PALLAS) from Central Asia (Mongolia, northwest China, northeast Tibet, Kazakhstan, and Russian Siberia) from the 13th century to approximately 1950 are compiled with the aim to provide materials for a taxonomic and population genetic revision of the dziggetais. Data on their phenotypic differentiation, historical distribution status, and their husbandry history in European zoological gardens, are reviewed, as is the gradual emergence of concepts of how to identify and to classify these populations. Hemiones were an important historical case in the discussion of how to represent …

Population Assessment Of Khulan (Equus Hemionus) In Mongolia, Badamjav Lkhagvasuren

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The data presented here suggest that 18,411 (± 224) khulan inhabit southern Mongolia with a density of 1.4 individuals per 1,000 km² within the 157,525 km² territory of its actual distribution. The Dornogobi province contains the highest number of khulan with a mere 67%, while 20% are found in the Ömnögobi province, 12% are in Djungarian Gobi and only 1% in the Gobi-Altay and Bayankhongor provinces. According to the proportion of foals and yearlings within each aimag, the Dornogobi, Ömnögobi east and Khovd populations have an average reproduction rate.

Kulan (Equus Hemionus Pallas 1775) In Turkmenistan, Victor S. Lukarevskiy, Yu. K. Gorelov

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

The kulan (Equus hemionus kulan) is the only odd-toed ungulate left in the wild in northern Eurasia. In the 1930s, the kulan survived in southern Turkmenistan only. In the 1940s, kulans were found only in an area named Badkhyz in Turkmenistan. To conserve the last natural population of this subspecies of kulan the Badkhyz Natural Reserve was established in 1941. The historical and contemporary distribution, fluctuation in numbers, conservation and sci research of kulan populations in the Badkhyz Natural reserve are reviewed in this paper.

Anadromous Rainbow Smelt And Tomcod In Connecticut: Assessment Of Populations, Conservation Status, And Need For Restoration Plan, Heather A. Fried, Eric T. Schultz

EEB Articles

(beginning of rainbow smelt executive summary)

Evidence indicates that anadromous rainbow smelt (Osmerus mordax) populations in Connecticut and elsewhere in the northeast United States have severely declined. Several sampling programs have documented declines in Connecticut’s smelt populations over the last three decades (Marcy 1976a, Marcy 1976b, Millstone Environmental Laboratory 2005). Similar declines have also been documented in the Hudson River (ASA Analysis & Communication 2005) and in Massachusetts (personal communication, Brad Chase, MA Division of Marine Fisheries 2004). Recreational and commercial fisheries in the region for this species have virtually ceased (Blake and Smith 1984). The Connecticut Fish Advisory Committee …

Assessment Of Anadromous Alewife And Blueback Herring Populations In Connecticut Coastal Streams And Connecticut River Tributaries, Justin P. Davis, Eric T. Schultz

EEB Articles

Alewife (Alosa pseudoharengus) and blueback herring (A. aestivalis) occur in anadromous populations that have a largely overlapping distribution from Florida to Newfoundland (Loesch 1987). Anadromous populations of these species are commonly collectively referred to as “river herring”. Adults inhabit coastal shelf waters until sexual maturity is reached at age 3-5 (Neves 1981). Sexually mature individuals make spawning migrations, commonly referred to as “runs”, into freshwater systems during spring months (Loesch 1987). Spawners can survive and return to spawn in subsequent years (Mullen et al. 1986). Juveniles reside in freshwater for 3-7 months, at which time they undertake a gradual migration …

Facts From Faeces: Prey Remains In Wolf, Canis Lupus, Faeces Revise Occurrence Records For Mammals Of British Columbia’S Coastal Archipelago, Michael H. H. Price, Chris T. Darimont, Neville N. Winchester, Paul C. Paquet

Biogeography and Ecological Opportunity Collection

Archipelagos often harbour taxa that are endemic and vulnerable to disturbance. Conservation planning and research for these areas depend fundamentally on accurate and current taxonomic inventories. Although basic ecological information is in its infancy, the temperate rainforest islands of coastal British Columbia are undergoing rapid human-caused modification, particularly logging. We report herein new mammal records for these islands as determined by prey remains in the faeces of Wolves (Canis lupus), the area’s apex mammalian terrestrial predator. Of particular interest is our detection of Marten (Martes americana) on islands previously inventoried and island occupancy by Moose (Alces alces), which have apparently …